TCONS_00071993-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071993-protein
Unique NameTCONS_00071993-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length439

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071993-protein ID=TCONS_00071993-protein|Name=TCONS_00071993-protein|organism=Clytia hemisphaerica|type=polypeptide|length=439bp
DLVKTNYKNMGNIYTVGPNEALVVSGGCFGQRAKRTIVGGWAWAWSCVSD
VQSISLEIMTLNPKCESVETAKGVAVTVTGVAQVKVIKEDELLKTACEQF
LGKNPEEIEGILLQTLEGHLRAILGTLTVEEIYKDRDTFAGLVREVASPD
VGRMGIEILSFTIKDIEDKVNYLDSLGKTQTAVVRREADIGVAEANRDAG
IKEAECDREKQDSRFKADTQIANSSRAYQMEKAAFDQEVNTKTAEAELAY
ELQAAKEKKGIRNEEIEIEVIERRKMIEVQEKDIEHREKELQATVRLPAE
ADAHKVQVLAEAAKTKKVLAAQADAEKIRMIGAAEAAAIEAIGKAEAERM
RQKAAAYKQYGDAALMSLILEAMPKIAAEVAAPLEKTQEIVIISDDKNGS
NVSSEVTKLLGSLPPQIQALTGVDLSKAIGQIPGAKVAS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044696XLOC_044696Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071993TCONS_00071993Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001107Band_7
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001107Band 7 domainSMARTSM00244PHB_4coord: 96..278
e-value: 0.0029
score: 18.9
IPR001107Band 7 domainPFAMPF01145Band_7coord: 15..195
e-value: 1.6E-21
score: 77.0
IPR001107Band 7 domainSUPERFAMILY117892Band 7/SPFH domaincoord: 47..187
NoneNo IPR availableCDDcd03399SPFH_flotillincoord: 43..187
e-value: 6.22397E-63
score: 201.193

Blast
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BLAST of TCONS_00071993-protein vs. Swiss-Prot (Human)
Match: FLOT2 (Flotillin-2 OS=Homo sapiens GN=FLOT2 PE=1 SV=2)

HSP 1 Score: 584.334 bits (1505), Expect = 0.000e+0
Identity = 286/418 (68.42%), Postives = 351/418 (83.97%), Query Frame = 0 
Query:   10 MGNIYTVGPNEALVVSGGCFGQRAKRTIVGGWAWAWSCVSDVQSISLEIMTLNPKCESVETAKGVAVTVTGVAQVKVIKEDELLKTACEQFLGKNPEEIEGILLQTLEGHLRAILGTLTVEEIYKDRDTFAGLVREVASPDVGRMGIEILSFTIKDIEDKVNYLDSLGKTQTAVVRREADIGVAEANRDAGIKEAECDREKQDSRFKADTQIANSSRAYQMEKAAFDQEVNTKTAEAELAYELQAAKEKKGIRNEEIEIEVIERRKMIEVQEKDIEHREKELQATVRLPAEADAHKVQVLAEAAKTKKVLAAQADAEKIRMIGAAEAAAIEAIGKAEAERMRQKAAAYKQYGDAALMSLILEAMPKIAAEVAAPLEKTQEIVIISDDKNGSNVSSEVTKLLGSLPPQIQALTGVDLSK 427
            MGN +TVGPNEALVVSGGC G   K+ + GGWAWAW C+SD Q ISLEIMTL P+CE VETA+GVA+TVTGVAQVK++ E ELL  ACEQFLGKN ++I+ ++LQTLEGHLR+ILGTLTVE+IY+DRD FA LVREVA+PDVGRMGIEILSFTIKD+ DKV+YL SLGKTQTAVV+R+ADIGVAEA RDAGI+EAEC +E  D +F ADT+IA+S RA++++K+AF +EVN KTAEA+LAYELQ A+E++ IR EEIEIEV++R+K I V+ ++I   +KEL ATVR PAEA+AH++Q +AE  K K+VL AQA+AEKIR IG AEAA IEA+GKAEAERM+ KA AY++YGDAA M+L+LEA+P+IAA++AAPL K  EIV++S D   S V+SEV +LL  LP  + ALTGVDLSK
Sbjct:    1 MGNCHTVGPNEALVVSGGCCGSDYKQYVFGGWAWAWWCISDTQRISLEIMTLQPRCEDVETAEGVALTVTGVAQVKIMTEKELLAVACEQFLGKNVQDIKNVVLQTLEGHLRSILGTLTVEQIYQDRDQFAKLVREVAAPDVGRMGIEILSFTIKDVYDKVDYLSSLGKTQTAVVQRDADIGVAEAERDAGIREAECKKEMLDVKFMADTKIADSKRAFELQKSAFSEEVNIKTAEAQLAYELQGAREQQKIRQEEIEIEVVQRKKQIAVEAQEILRTDKELIATVRRPAEAEAHRIQQIAEGEKVKQVLLAQAEAEKIRKIGEAEAAVIEAMGKAEAERMKLKAEAYQKYGDAAKMALVLEALPQIAAKIAAPLTKVDEIVVLSGD--NSKVTSEVNRLLAELPASVHALTGVDLSK 416
The following BLAST results are available for this feature:
BLAST of TCONS_00071993-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FLOT20.000e+068.42Flotillin-2 OS=Homo sapiens GN=FLOT2 PE=1 SV=2[more]
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