TCONS_00072166-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072166-protein
Unique NameTCONS_00072166-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length508

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072166-protein ID=TCONS_00072166-protein|Name=TCONS_00072166-protein|organism=Clytia hemisphaerica|type=polypeptide|length=508bp
MDFYKFLTFLICLSSVTLCFGAENEAIFNGVRYYFSPTPLSWQNAEIDCI
NRGGHLTSVHSKAENDFLTDQSISRFGGVSLWYGGIRINNVFTWSDRTPF
TTTFWALGEPNGPHVENCLHMTADHIGQWNDLRCIPELRYVCKLGEGIPI
DVECSASSLKAIFNITDLDAQLLPYSIKFLGNDTCESITAASTNHIKDGK
TWIATNYTDCGTKAYHQGNQIAFEQTILIEYGSRSQQSLVYRYFNSSYTV
KCVLDRSITTNLTIDVIDRQTDQQVNGDSKFKLQLKAIDAGTNNEIQGVA
KIGEKLKFEINLQDPTNTVKTSPQNCYATRYNGTGRYNLIANRCAGQDDN
TTQITSANNAIHTFSWELLAFRYFGSSDAVIIVCEVLICKNDPFAILSEE
CKRCGQIRTRYGQDRRRRDEVYSKENTILERSTIQTAPIYIIEREEAPAV
VVKSDNFLAEPAGISIIVILALFMLVICSVLLKRTFCAAAIASDKKNVES
GFDNPAMQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044818XLOC_044818Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072166TCONS_00072166Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001304C-type_lectin-like
IPR001507ZP_dom
IPR016186C-type_lectin-like/link
IPR018378C-type_lectin_CS
IPR016187CTDL_fold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001304C-type lectin-likeSMARTSM00034CLECT_2coord: 21..143
e-value: 1.7E-24
score: 97.4
IPR001304C-type lectin-likePFAMPF00059Lectin_Ccoord: 39..143
e-value: 3.5E-14
score: 53.4
IPR001304C-type lectin-likePROSITEPS50041C_TYPE_LECTIN_2coord: 28..143
score: 21.21
IPR001507Zona pellucida domainSMARTSM00241zp_4coord: 153..407
e-value: 1.3E-4
score: -18.2
IPR001507Zona pellucida domainPFAMPF00100Zona_pellucidacoord: 154..393
e-value: 1.0E-17
score: 64.7
IPR001507Zona pellucida domainPROSITEPS51034ZP_2coord: 153..408
score: 21.339
IPR016186C-type lectin-like/link domainGENE3D3.10.100.10coord: 19..148
e-value: 1.6E-31
score: 108.9
IPR018378C-type lectin, conserved sitePROSITEPS00615C_TYPE_LECTIN_1coord: 118..142
NoneNo IPR availableCDDcd00037CLECTcoord: 33..143
e-value: 5.67871E-29
score: 109.632
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 9..144

Blast
[Close]
BLAST of TCONS_00072166-protein vs. Swiss-Prot (Human)
Match: CLC4K (C-type lectin domain family 4 member K OS=Homo sapiens GN=CD207 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.334e-16
Identity = 45/123 (36.59%), Postives = 66/123 (53.66%), Query Frame = 0 
Query:   28 FNGVRYYFSPTPLSWQNAEIDCINRGGHLTSVHSKAENDFLTDQSISRFGGVSLWYGGIR--INNVFTWSDRTPF----TTTFWALGEPNGP-HVENCLHMTADHIGQWNDLRCIPELRYVCK 143
            F G  YYFS  P +W +AE  C++R  HLTSV S++E +FL   +    GG+  W G  +  +   ++W D TPF    +  FW  GEPN   + E+C ++ A  +  WND  C     ++CK
Sbjct:  202 FKGNFYYFSLIPKTWYSAEQFCVSRNSHLTSVTSESEQEFLYKTA----GGLIYWIGLTKAGMEGDWSWVDDTPFNKVQSVRFWIPGEPNNAGNNEHCGNIKAPSLQAWNDAPCDKTFLFICK 320
The following BLAST results are available for this feature:
BLAST of TCONS_00072166-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CLC4K2.334e-1636.59C-type lectin domain family 4 member K OS=Homo sap... [more]
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