TCONS_00072815-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00072815-protein
Unique Name	TCONS_00072815-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	452

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00072815-protein ID=TCONS_00072815-protein|Name=TCONS_00072815-protein|organism=Clytia hemisphaerica|type=polypeptide|length=452bp
MMANIIEYLPTNNLFSFKVVFLATLTSIPAGSVVFVNTLIAPALQCEWDL
TTMEVTLISVAFYVGCAIGSWYWGRIADIYGRRKTLLATVSTMVYFALLS
TASSSYGFHLLTRFFVGVGYASSFILSVIYNTEFTKSTDHGKAVFFYNLM
YTFGCLFSIAVSYWTLNRYGWRIYTLASLSPSLVLICLMVAFLPESILYL
QAQGRTTEVLELLDDISKTTKNYLPKDVVFKKTRTMERDQEGYIAVFLKH
RVKICGLCFYGVPMLLNYYGLPFFVDFKLQHSGTCKLLANRTKLSVACSM
LTDSDLLRTFLINLGYIPGAFIGYFIAEKLGRKILLNTTMVLLAACYFSQ
LICLPHILSHLLLFLASGFSLCADCFIVLYASELFPTNVRTTATGISATV
WKTFSILSPLLFQHFIYLNTTVVIVLMGAWCIVGMFGLYPLPETLGKNLK
DF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_045195	XLOC_045195	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00072815	TCONS_00072815	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005828	MFS_sugar_transport-like
IPR020846	MFS_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0022857	transmembrane transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0022857	transmembrane transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 230..451 e-value: 2.8E-17 score: 62.1
None	No IPR available	GENE3D	1.20.1250.20		coord: 11..210 e-value: 4.8E-25 score: 87.5
IPR005828	Major facilitator, sugar transporter-like	PFAM	PF00083	Sugar_tr	coord: 51..450 e-value: 4.3E-33 score: 114.8
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 19..446 score: 28.987
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 20..442 e-value: 1.38643E-20 score: 90.0657
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 13..450

Blast

[Close]

BLAST of TCONS_00072815-protein vs. Swiss-Prot (Human)
Match: SVOP (Synaptic vesicle 2-related protein OS=Homo sapiens GN=SVOP PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.868e-35
Identity = 111/457 (24.29%), Postives = 199/457 (43.54%), Query Frame = 0

Query:    1 MMANIIEYLPTNNLFSFKVVFLATLTSIPAGSVVFVNTLIAPALQCEWDLTTMEVTLISVAFYVGCAIGSWYWGRIADIYGRRKTLLATVSTMVYFALLSTASSSYGFHLLTRFFVGVGYASSFILSVIYNTEFTKSTDHGKAVFFYNLMYTFGCLFSIAVSYWTLNRYGWRIYTLASLSPSLVLICLMVAFLPESILYLQAQGRTTEVLELLDDISKTTKNYLPKDVVFKKTRTMERDQEGYIAVFLKH-RVKICGLCFYGVPMLLNYYGLPFFVDFKLQHSGTCKLLANR----TKLSVACSMLTDSDLLRTFLINLGYIPGAFIGYFIAEKLGRKILLNTTMVLLAACYFSQLICLPHILSHLLLFLASGFSLCADCFIVLYASELFPTNVRTTATGISATVWKTFSILSPLLFQHFIYLNTTVVIVLMGAWCIVGMFGLYPLP-ETLGKNLKD 451
            M+ + +E +     F +K+  L  L  +     + + +++AP L CEW L + +V L++   +VG    S  WG I+D YGR+  L  +V   +Y+ +LS  +  Y + L+ R  VG G       SV    EF       K +    + +  G +F + ++ + +   GWR   + S  P L+L  ++  +LPES  Y    G   + +  L  I+      +P   + K   + + D+     +F  H R     L F       +YYGL        Q    C + + +     K S+AC  L++ D +      L   PG  +  +I ++LGRK  +    V+ + C     IC+   +  LLLF+A  F         +Y  E++PT  R    G  + + +  ++++P + Q  +  +  + + +    C++       LP ET G+ L++
Sbjct:   69 MVEDAVEAIGFGK-FQWKLSVLTGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFVGMMSSSTLWGNISDQYGRKTGLKISVLWTLYYGILSAFAPVYSWILVLRGLVGFGIG-GVPQSVTLYAEFLPMKARAKCILLIEVFWAIGTVFEVVLAVFVMPSLGWRWLLILSAVP-LLLFAVLCFWLPESARYDVLSGNQEKAIATLKRIATENGAPMP---LGKLIISRQEDRGKMRDLFTPHFRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCGISSRKKAVEAKCSLACEYLSEEDYMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVIFSFCSLLLFICVGRNVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLESSVYLTLAVYSGCCLLAALASCFLPIETKGRGLQE 519

The following BLAST results are available for this feature:

BLAST of TCONS_00072815-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00072815-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SVOP	2.868e-35	24.29	Synaptic vesicle 2-related protein OS=Homo sapiens...	[more]

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TCONS_00072815-protein (polypeptide) - C. hemisphaerica