TCONS_00001205 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001205
Unique NameTCONS_00001205
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3206

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001205 ID=TCONS_00001205|Name=TCONS_00001205|organism=Clytia hemisphaerica|type=transcript|length=3206bp
TGACGGTCGACCAATCAATAAGGGCGAAAAGATGAGAGAAGGAGTGACCA
AGATGGTGCAAAACGTGTTGATGTTTGATGAATCGCCTTTTGATGGGATT
TGGATCAACAATCTTTTGATTGGCTAATTGTCTTAAAGAGAATCGAGCTG
CGCCAGCTTTCACAAACTGAAGATTGAACAAaacaggaaaatcgaaaaag
aaaaatccaagACAGGGAAGATTTTTACCCCATGAATTAAGTTAGGGGTC
AAAGGGTTTGAAAATGCTGAAGAAATAATTAAACAAAGAATTTAGATAAA
GgaaTATAATACAATTTGCAATGCATCTTTTCTCGCCACAGAGCCTTTTA
GTGCTCACCCTTTATCTNACAATTTGCAATGCATCTTTTCTCGCCACAGA
GCCTTTTAGTGCTCACCCTTTATCTATCCTCAACCGTCCATTGTCTACAC
AAAAGTCGAAGAGATACATCAGATTTGAAAACAGATTCTCTTCTTGCCAA
AGTTCTTGGGGATAGTGATGTAAAGCAAGAGAGAAAAGATCGCTCAATAG
ATATCTCACAAGAACCAAACACCAATGCAAAGTGGGGTCAACAAGCTTGG
TCGTATTTCTTCGGCGACAAGCAGAATGATAAGAGAGCTGTCAATCCAGC
TCAAGAAGCAATGTATAACAATCGATTCCAAGGAGTGGATCGAAGAAGTA
ACATCCCTACAGAAGATTCTTCCATCTCACAATCAGCAGACGCTGACTCC
TTCCCTCTCCATTTGAATGTTCATTCACCGAATGCTCGACTCAAAGGAGC
TGTACCTCACTTcgaagaatatgGAGAGACAGTTGAGTCGGTGATGAAAG
CACAAAAACGTTTCAAAATCCCTCGTCCAGAGGAGTACAGTTCAGAGATC
GTCAAAAAGAACGACATCCCACGACCGGATGACGAAGATGACGAACCTGT
CGTACATCACAAAAAGAAGCGATCGAAAGTCGCCAAGAAACAATACGTGC
AATACCCACAGCAACAACAATTCGCTTACAATCCATACGCTAGCAATCTG
ATGGCTTCGGGTGACTTGTACGCACAACAAAATGCTGGCATGATGCAATT
CCAGCAACCTGCTGCTGTAGCGCAACCAATGGCCACCGTTCCTGTGGCAA
ACATGGCCGCTGCAACTTCTCATGTGCAAAATCTTGATGGTGCTATCGCA
AGACCCATCGTCACTGAAAAAGTATGTGACGATCAATTTGCTTTATGTAA
CGAATACGCCAAGAACAATTATTGTACTGACTATGAGAAGCAAATGAGAA
CACAATGTAGAAAGTCCTGCAACTTCTGTAAATCAGAAACACCGATGACG
TTATCGTCAGCAGCTACATCAACCAGTGAAGATGACGTcagtggttctgg
tgaattctcTGGATCTGGTGAACAAGAACCCATGCGAAGAAACTTGAAGG
CGGCCGTCACTGGTAGCAAAAGACATGATATCCTTCAAGAAAGAGCGAAA
ATCCGAGTTCCCGATCGTGATGAATCGGGTGACGGTTCCGGATCGGGATC
TGCTGATGGCAGTGGAAGCGCAAGTGGCTCAGGCGATGCTGATACCGACA
ACGGACCAATCGAAATTCCAATCCAACAAAACCCAATGCAAGAATTCCAC
ATCCCTTCATCGAGAAAAGACTCTTTTGCTGGCCCACCCCCACAATCCGA
TTCGGATGATGGATCGGGTTCAGCAAGTGGATCGGGTGATGAGTCAGGCG
ATTCTCAAGATAATGACCAGCAACCACAGGTTGTAGAGGCACCAAAGCCA
AAGATTTCGAAGAAATCTAAAATCCCACGAAGACCAAAGATTCACCAAGT
TAGCAACAACAAACGAAGCAGAATTCCCAATCGACCTGCTCAACCGGTGT
TTTATCCAAAGATCGACTTGAAAGCCATCGCATCGTCTCTAGCTCATTAC
GAAGAAGCCGCTTTGGAATTGGCTGGTGAATACCCAAAGATCTCTGATGC
TGAAGTAACGGAATACACCCGCTCCTTCATTCCTCATCCGGAAAGCGACG
ATGAAGTCCGGGCCAACCGTAACCGACAAAACATCCAAATCGCCAAAATC
ATTACTGCCGAACGTGCCCGTAAGAGCAATATTCCGCAATTCTTGAAAGT
TACCGGTGATGTCAAAAAGCCGGAAAAGGACGATTCAGATGCAGCTACTT
TAGACTCTGTTCAACAGCGCTTCATTGTTCCTGGAGTTGAGCCTACATTG
AATGACTATTATGCAGAAACTGGCAAATTGaatccttttgataaaaaagg
agCCAAGAATTACAAGAAATCACGTATTGAGGGTTACAATGCAAATTACG
ATCCTTATGAATACTTGAGGAACATGCCAGCTGGTGCATCCATGGAACCA
ATCATTGATCCTCACAAACGCGCGTCCATTCCTTCTGATCACTCGTACCC
AGTCTTCTTGATGAAAGTCTCACCAACTGATGAAGCCAAATACGTCGAAG
AAAAAGCCGAAAGACGAGGTGAAATCCGCCATTTCAATGCCGAGGGCGTC
GAAATCAACAACGCTAAATACCAACAAATGTTACATGGCGGCCACCCTGA
AATGGAAAGTGCCGTTCGTGCTCAAGTAGCTGCCACACGCTCCAAGACAC
CTCAAGCTCCAGCTCCCCGCCCTCAAATTCCAGACTTCACAATCGCTAGC
AAGAAAGCCACCCTTCCATCTTTCCCTGCCGCCCCTGAAAGCGCCCCTGC
TGCTTACCAACAACCATCAAACCCATACGCGAACAACTTCGCAGAAATGC
AACAGAACGCCATGCAACAAGCTTCACTCTTCCCAAATAACAATCAACAA
TTCAACTATGAACAACAACCAGGACCTAACAACATGAGGAGTAAGATGTT
CAACGCTTTCTTCAATGTCGGTGCAAACAGTTCCCCGGAGGAGGGATCAG
GATCAGGAGCAGGAGAAGGTCTAGCGAGGATGAACGTGATCTAATGTGGA
TGGTCGAGGCAAAATCGTTTCCAGTGAATGTCTGGCCAATCGAGATTATC
GGACAAAATGATCGAATATCGTGCCATTATTTAGTCAATTTGTATTTTAA
GTTAATTTAAGTTAATTTTTAGagactttttatcaaaatcagtAAATTGt
gtatagaaatattttttgtaagaaaaattaATGTTCCATTGAGACTATCA
GTAAAA
Run BLAST on NCBI

protein sequence of TCONS_00001205-protein

>TCONS_00001205-protein ID=TCONS_00001205-protein|Name=TCONS_00001205-protein|organism=Clytia hemisphaerica|type=polypeptide|length=871bp
MHLFSPQSLLVLTLYLSSTVHCLHKSRRDTSDLKTDSLLAKVLGDSDVKQ
ERKDRSIDISQEPNTNAKWGQQAWSYFFGDKQNDKRAVNPAQEAMYNNRF
QGVDRRSNIPTEDSSISQSADADSFPLHLNVHSPNARLKGAVPHFEEYGE
TVESVMKAQKRFKIPRPEEYSSEIVKKNDIPRPDDEDDEPVVHHKKKRSK
VAKKQYVQYPQQQQFAYNPYASNLMASGDLYAQQNAGMMQFQQPAAVAQP
MATVPVANMAAATSHVQNLDGAIARPIVTEKVCDDQFALCNEYAKNNYCT
DYEKQMRTQCRKSCNFCKSETPMTLSSAATSTSEDDVSGSGEFSGSGEQE
PMRRNLKAAVTGSKRHDILQERAKIRVPDRDESGDGSGSGSADGSGSASG
SGDADTDNGPIEIPIQQNPMQEFHIPSSRKDSFAGPPPQSDSDDGSGSAS
GSGDESGDSQDNDQQPQVVEAPKPKISKKSKIPRRPKIHQVSNNKRSRIP
NRPAQPVFYPKIDLKAIASSLAHYEEAALELAGEYPKISDAEVTEYTRSF
IPHPESDDEVRANRNRQNIQIAKIITAERARKSNIPQFLKVTGDVKKPEK
DDSDAATLDSVQQRFIVPGVEPTLNDYYAETGKLNPFDKKGAKNYKKSRI
EGYNANYDPYEYLRNMPAGASMEPIIDPHKRASIPSDHSYPVFLMKVSPT
DEAKYVEEKAERRGEIRHFNAEGVEINNAKYQQMLHGGHPEMESAVRAQV
AATRSKTPQAPAPRPQIPDFTIASKKATLPSFPAAPESAPAAYQQPSNPY
ANNFAEMQQNAMQQASLFPNNNQQFNYEQQPGPNNMRSKMFNAFFNVGAN
SSPEEGSGSGAGEGLARMNVI
Run BLAST on NCBI

transcript from alignment at sc0000007:1002880..1010922-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001205 ID=TCONS_00001205|Name=TCONS_00001205|organism=Clytia hemisphaerica|type=transcript|length=8043bp|location=Sequence derived from alignment at sc0000007:1002880..1010922- (Clytia hemisphaerica)
TGACGGTCGACCAATCAATAAGGGCGAAAAGATGAGAGAAGGAGTGACCA
AGATGGTGCAAAACGTGTTGATGTTTGATGAATCGCCTTTTGATGGGATT
TGGATCAACAATCTTTTGATTGGCTAATTGTCTTAAAGAGGTATGTTACT
CAGTAAGCCGATACTTTGTTATAAAGACTTGTCTCTTTTCACTAATTCAG
TCATAAGAGCTTAAGCGAGTGTTTCTTTTTTGAAAAGAATGCCATGTTTT
CTAGTCTCATCCTGTTTTGTGACTTTATTATATATGGCTTAGTTTAATTC
GATCGGTTTCATGTTTATGTAATGCCTCGCAGATAGAAATGCTGGTAACA
AAGTGTATCCTAAATTACCTCTAAGAGAGAAAGATCCGTGTTTTACATGA
ACAAAATAACGTCCTTTCATTTGACCTGTGTCCGATCATCGAACCTTCCA
AATTATGTTATCACAGTATGAAGTCGGACAAATTTCACAATAAACGTGCA
ATTTTTCATAGTCAAACCGAATTCTGCCATTTAATTCCCATCCCAATCAT
GAGTGTCTTTTTTTTAAAGTCGAATGATCTACATCTACCTATAATAATTG
CGCAACTTTCATTCGAAGAGCGATTTTAGTCATGATCTTGATCTCAACAG
CGAAAAGTCTTATAAGGATAATACCTTATCGGGGAAAACTTCGTCGGGGA
AAATTTTCGTCGGTGAAAATTTTCGTCGGGGAAAAATTCGTCACTTGCTG
GTAGTTGGTAAACGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTTCGTCACTTGTCCAAAATTTCGTCACTTTTCCC
CGACGAAGTTTTCCCCGATAAGGTATTCAGCAAATTTCTGGACTAATTTT
TCACAACTTCAGTGACTTTCTGGTATGGTTAAGTTTCAAGAAGTTAAATA
TTATTTTAGAGCAAAACAAATTACACCGCTTCTCTTTCGAAACTTCTTAT
CTTTGAGAAAACACGTATCACTCCATTTAGCGAATTTAATATCATCTAAT
TAATTTTCTAATCTTTCTTAGCAGTTCGGATTTCGGGCTGACCTCCCAGC
GCAGCTGGTTTATTTTTACTTCAATTGCCCCCCCCCCCTAAGGGCTATTC
TAATTTTAGTGCAGATTTCCGTGACAAAATGAAGTAAGAAATGAAGAACG
CCGGATAAAATTTATTCTCCTTCGGATAAAAGTCTCTGAGTTTGAGTTTT
TTCATGCAACTAAGCCTAATCTAACCAGGACGCGAAAGTATTACTTTTTT
TGTTGATAAAGATTTAATTGGTAGAATATTTTGTAGTGCGGGGAATATTA
ATTTGAGTTCGGTATGAAATTTAGTTCAAATATAAACTGAAGGTAATTAC
ATGATTTTTACCTGATAATTTTAGAACAAAATCTTATATCGAGGAGTAAA
TTTAATTCCTGATTAGATGTTACCGTGGCTAGCCATAAATAATGAAATTA
CTCATAAAAAATGATGCGTTGATCTAGTCTCTTTGCCTTTCCCCTATTTG
GGAAATTATTTATTTGTACTAAAACTAAATTCGGTTTAATTAAATCTGTG
TTTTAGATAAATTCCCTGAATTCTTAAGCATGTCAAATTGAAAATATAAC
CTGGAATATTTTTGAACTTAAAAAATTAATAAGCATTAATTCAATTAGCA
CGGTGAGTAGTAATTAAAATTGATTGTTATCAACTCTCAATATTGATAGC
ATCTTTGTTTAAGGCTATTCAGATCCATCGTTGTTTTTATTCGCTTTATT
TACTAATATTTGTTTCTTTCGAATCTATTTCGAACATTTGCTTTTTTCAG
TGTTCGAACTAAGACGGGGGACTTCCTATCTTCTTAATTAGCTGTATTTT
ATACTACAAATCTATCAAATTTTTACCTACAATACCCCCGGATGGAAGAT
CAGCTATTGTTTATGAAGGATACATTTTCCAGTTGATTGAGCAGCGAACA
ATACAGTTTATTTCGTCATGTTTTTCTTGCTCACTTTGAGCATTGCTGCA
GAATCGAGCTGCGCCAGCTTTCACAAACTGAAGATTGAACAAAACAGGAA
AATCGAAAAAGAAAAATCCAAGACAGGGAAGATTTTTACCCCATGAATTA
AGTTAGGGGTCAAAGGGTTTGAAAATGCTGAAGAAATAATTAAACAAAGA
ATTTAGATAAAGGTTAGTTTTGGTTTTGGAATTTTCAATTTTTTTTTTTT
GGAATGGCGTACATTGGTGACGAGTTGTTGTACTGTTTGATTGGGCGAGG
CCCAACGTTGTATTGTTTTATATGGATTTCACTTTTCTTTTGTTTCAGGA
ATATAATACAATTTGCAATGCATCTTTTCTCGCCACAGAGCCTTTTAGTG
CTCACCCTTTATCTNACAATTTGCAATGCATCTTTTCTCGCCACAGAGCC
TTTTAGTGCTCACCCTTTATCTATCCTCAACCGTCCATTGTCTACACAAA
AGTAAGTCCCTTTTCAAGATACACAACTCATTCTAGAGCTTATACTTAAC
TTTGATTGACCAGTGATTCAAGACGTTTAGAAAACCTTTTGATCCAGCCA
GTTGTCTTGGCGATGAATGGAACAAAACATGAGACATGAGCTATCGACAA
ATACCAGGCAATTAAGCGTTTGATAATTAGATTTCAGCATTTAAGATTTC
TTTTATCAGTCAAGAATAGAGGCAAATTTATTTTCCGATACTCGGAGTTT
CGTGCCGTTTCAGGCAGTCTTCAGTCAGATTTAAAAAAATTCTTGACTGA
TATATCGCTCTACCGATGGTATAGAGCACTTTCTTGAATCGCAAGTCAGA
TTTGCAAATAAGATTTCTGTTATATTTCTTCATCATAATTCATTAATTAC
CCTCCAAACACTTTTACAGGTCGAAGAGATACATCAGATTTGAAAACAGA
TTCTCTTCTTGCCAAAGTTCTTGGGGATAGTGATGTAAAGCAAGAGAGAA
AAGATCGCTCAATAGATATCTCACAAGAACCAAACACCAATGCAAAGTGG
GGTCAACAAGCTTGGTCGTATTTCTTCGGCGACAAGCAGAATGATAAGAG
AGCTGTCAATCCAGCTCAAGAAGCAATGTATAACAATCGATTCCAAGGAG
GTATGCCTCCTTCGATTTATATTATATTATATTATCTGAATATTCACTGT
AGCTTTTTTACCCTTTTAAAATCTTCGGAAAACTTCATTTTCGTTTTCAT
ATGAAGGTTTCTTTTATCCTTATTTTCAGTGGATCGAAGAAGTAACATCC
CTACAGAAGATTCTTCCATCTCACAATCAGCAGACGCTGACTCCTTCCCT
CTCCATTTGAATGTTCATTCACCGAATGCTCGACTCAAAGGAGCTGTACC
TCACTTCGAAGAATATGGTAAGAAAAAACACAACTCAACGCATGATGATG
ATTCCAAAATCAGTTTTAGTGTCGTACATGGTGTGATAAAATACCTTAAA
CTGCGGTTGGAAGTGCGCTGTACTTCTTCAATCGATTATTTCCCTTTTAC
ATCTTTTCTTTAAGGAGAGACAGTTGAGTCGGTGATGAAAGCACAAAAAC
GTTTCAAAATCCCTCGTCCAGAGGAGTACAGTTCAGAGATCGTCAAAAAG
AACGACATCCCACGACCGGATGACGAAGATGACGAACCTGTCGTACATCA
CAAAAAGAAGCGATCGAAAGTCGCCAAGAAACAATACGTGCAATACCCAC
AGCAACAACAATTCGCTTACAATCCATACGCTAGCAATCTGATGGCTTCG
GGTGACTTGTACGCACAACAAAATGCTGGCATGATGCAATTCCAGCAACC
TGCTGCTGTAGCGCAACCAATGGCCACCGTTCCTGTGGCAAACATGGCCG
CTGCAACTTCTCATGTGCAAAATCTTGATGGTGCTATCGCAAGACCCATC
GTCACTGGTATGTTAAAAGCTTCAGATAAAACGTTTTATGGTTTGCTTCT
CTCCTCCGTGTACTCTGCTTTGAGTCATGCTTGTTATGTGAAAAGATAAG
TCTCCCCTCCATGTAATTTTGGCCGTAAAGGAAAGTCTTTTCGCAGTTTG
CGCCGCATTTCGGATAACGGAATTTAGCACTTTCTTTGTTTTTTGTTTTA
CATTTTTCTCAAATTCCGGCGTTAAATGTAACGTTTGTATGAAAACCACG
GTGACTGTGCAAATTATGGAGGAAATAAATGGCTTCAAATCTTTCATAGG
AGGAGGGCCTTCGACTAAACCTTATTGACTTTGACCAATCATATCAACCC
TTCACCTTCATCTTAATTCTACTTTCTAGAAAAAGTATGTGACGATCAAT
TTGCTTTATGTAACGAATACGCCAAGAACAATTATTGTACTGACTATGAG
AAGCAAATGAGAACACAATGTAGAAAGTCCTGCAACTTCTGTAGTAAGTT
GATTGTTTCTATCTGTCGATGTTTAGAACTTTTTGTACATTAAAGTCAAC
TTTTTTAAGTCCTTTAATTAAAAATTAGTGTTTTTACCAACAAAATTTTC
ATTAAATGAATGGGAAGATTTGCTAAAACACATCACTTCTTTTGATTGCA
GAATCAGAAACACCGATGACGTTATCGTCAGCAGCTACATCAACCAGTGA
AGATGACGTCAGTGGTTCTGGTGAATTCTCTGGATCTGGTGAACAAGGTT
TGTCTTTCCTCTAAAGAGTTCTAAAAGCTTTGACCTCGATTTAAACTCTT
TTTCAAAGCGGGCTAACACGGCTTTTTGCGCAATGCAATTGGTTCTTTTC
GCATGACGACGGGCCTACACTGCCCATAGTTGCCCGTCGTTAGGAAAATT
CATTGTGACGTCACTTTTTCAAAGGAAAATGAACAATGCGTTTCCCTCAT
TTATTATTTCTGACGTCATAAATTATAAAAATTTTTGATCTCGTTTCGCT
TTATTTTGCTATTTTTCCTGGATAAAGCACTAAAAATCAATCGATAATGA
CCGGTTTTTTTCGGGCTGTACTGAAAATATTGCCCTCGGTCAATGCAACA
ACCTCGCAAGCTCGGTCGTTACTTGACCTCGGGCAATATTTCTCAGTACA
GCCCTCACTAACCGGTCATTATTGTATTAGGTTTATGATTCTTTCTCTCT
CTTATAAATATATGAGAATTAAGCAAAACATAACTTCTATTGTAGAACCC
ATGCGAAGAAACTTGAAGGCGGCCGTCACTGGTAGCAAAAGACATGATAT
CCTTCAAGAAAGAGCGAAAATCCGAGTTCCCGATCGTGATGAATCGGGTG
ACGGTTCCGGATCGGGATCTGCTGATGGCAGTGGAAGCGCAAGTGGCTCA
GGCGATGCTGATACCGACAACGGACCAATCGAAATTCCAATCCAACAAAA
CCCAATGCAAGAATTCCACATCCCTTCATCGAGAAAAGACTCTTTTGCTG
GCCCACCCCCACAATCCGATTCGGATGATGGATCGGGTTCAGCAAGTGGA
TCGGGTGATGAGTCAGGCGATTCTCAAGATAATGACCAGCAACCACAGGT
TGTAGGTAGGTACTTAAAGTTGTTTTTTTGACTGCTGTTAAATTGCTAGA
AATTCATTGTTCCGAGTTGAAGAATATTCCCTTTCTTTACATAGAGTTTC
ACCTTCTTTTCATTGCAGAGGCACCAAAGCCAAAGATTTCGAAGAAATCT
AAAATCCCACGAAGACCAAAGATTCACCAAGTTAGCAACAACAAACGAAG
CAGAATTCCCAATCGACCTGCTCAACCGGTGTTTTATCCAAAGATCGACT
TGAAAGCCATCGCATCGTCTCTAGCTCATTACGAAGAAGCCGCTTTGGAA
TTGGCTGGTGAATACCCAAAGATCTCTGATGCTGAAGTAACGGAATACAC
CCGCTCCTTCATTCCTCATCCGGAAAGCGACGATGAAGTCCGGGCCAACC
GTAACCGACAAAACATCCAAATCGCCAAAATCATTACTGCCGAACGTGCC
CGTAAGAGCAATATTCCGCAATTCTTGAAAGTTACCGGTGATGTCAAAAA
GCCGGAAAAGGACGATTCAGATGCAGCTACTTTAGACTCTGTTCAACAGC
GCTTCATTGTTCCTGGAGTTGAGCCTACATTGAATGACTATTATGCAGAA
ACTGGCAAATTGAATCCTTTTGATAAAAAAGGAGCCAAGAATTACAAGAA
ATCACGTATTGAGGGTTACAATGCAAATTACGATCCTTATGAATACTTGA
GGAACATGCCAGCTGGTGCATCCATGGAACCAATCATTGATCCTCACAAA
CGCGCGTCCATTCCTTCTGATCACTCGTACCCAGTCTTCTTGATGAAAGT
CTCACCAACTGATGAAGCCAAATACGTCGAAGAAAAAGGTATTTAAGTAT
GTTCATTAGCATAGCAAACTACACGAAAATAAGATACTGAATAGCATGTT
GTTCTTTTTCAGTTTCTATGATTTCCACGTTTGATTTTACAACAGTTTAA
TAACGTTTTTTGCATTTACTTTTTCCAGCCGAAAGACGAGGTGAAATCCG
CCATTTCAATGCCGAGGGCGTCGAAATCAACAACGCTAAATACCAACAAA
TGTTACATGGCGGCCACCCTGAAATGGAAAGTGCCGTTCGTGCTCAAGTA
GCTGCCACACGCTCCAAGACACCTCAAGCTCCAGCTCCCCGCCCTCAAAT
TCCAGACTTCACAATCGCTAGCAAGAAAGCCACCCTTCCATCTTTCCCTG
CCGCCCCTGAAAGCGCCCCTGCTGCTTACCAACAACCATCAAACCCATAC
GCGAACAACTTCGCAGAAATGCAACAGAACGCCATGCAACAAGCTTCACT
CTTCCCAAATAACAATCAACAATTCAACTATGAACAACAACCAGGACCTA
ACAACATGAGTAAGTGGAGAATTCAAATCTTCATACCCTTAGATTAGTAC
CGAACTTCTTATTCTTAGTTTTCTAAATTGAGAGTTACAGACCTTGGAAA
AGCTTTTTAACCAGCAATTAAAGTCATACAACAGGCTTCAACGACAGCTC
TCAAAATCATATTTCCACAATGGAAACAATAGTAATTTTTACACTTGTTT
TGCAGGGAGTAAGATGTTCAACGCTTTCTTCAATGTCGGTGCAAACAGTT
CCCCGGAGGAGGGATCAGGATCAGGAGCAGGAGAAGGTTAGTTGCTCTCC
CTCTTTGCTTTCTTTTGTACTTTAGTTAATCGATTTCTACATACACTGGA
TCGCATATTCACCTTGTAAGTGAGGACTTGGAGGCTGATATTTTGCCCAC
AGTCTGTTTGTTAGAGCTTGTTTGCTTTGCAAAACGGACGATCCAGTGTA
TCAAAGAGATAATGGCGTCACAATATTATTTTTTATTGAGGGGAAAGAAA
TGTTGATAGTAAACTAAACCTAATTACAAAATTTTCTTTGTATTCTTCAA
ATTGTGATTTAATGTTATTTGCATGTACGTATTATGGAGCTGAAACTTCG
TTAACGGGGAAGAGTGATCACACACTCCTTCACATGGTTTATTTACCATT
TCTTTCCTTCTCACGTCTCAAAAAAACTTTTGGCCATACCTCAAAACCAC
ATCACGCTCCTTCCTCGTTAACGACCTATCAACATTTCTTTCCACAAAAA
GCAAAATCAATTTTCGTACAAAACACTCAAAAACAAATTTTTCGAAATTT
TATAGGTCTAGCGAGGATGAACGTGATCTAATGTGGATGGTCGAGGCAAA
ATCGTTTCCAGTGAATGTCTGGCCAATCGAGATTATCGGACAAAATGATC
GAATATCGTGCCATTATTTAGTCAATTTGTATTTTAAGTTAATTTAAGTT
AATTTTTAGAGACTTTTTATCAAAATCAGTAAATTGTGTATAGAAATATT
TTTTGTAAGAAAAATTAATGTTCCATTGAGACTATCAGTAAAA

Coding sequence (CDS) from alignment at sc0000007:1002880..1010922-

>TCONS_00001205 ID=TCONS_00001205|Name=TCONS_00001205|organism=Clytia hemisphaerica|type=CDS|length=2616bp|location=Sequence derived from alignment at sc0000007:1002880..1010922- (Clytia hemisphaerica)
ATGCATCTTTTCTCGCCACAGAGCCTTTTAGTGCTCACCCTTTATCTATC
CTCAACCGTCCATTGTCTACACAAAAGTCGAAGAGATACATCAGATTTGA
AAACAGATTCTCTTCTTGCCAAAGTTCTTGGGGATAGTGATGTAAAGCAA
GAGAGAAAAGATCGCTCAATAGATATCTCACAAGAACCAAACACCAATGC
AAAGTGGGGTCAACAAGCTTGGTCGTATTTCTTCGGCGACAAGCAGAATG
ATAAGAGAGCTGTCAATCCAGCTCAAGAAGCAATGTATAACAATCGATTC
CAAGGAGTGGATCGAAGAAGTAACATCCCTACAGAAGATTCTTCCATCTC
ACAATCAGCAGACGCTGACTCCTTCCCTCTCCATTTGAATGTTCATTCAC
CGAATGCTCGACTCAAAGGAGCTGTACCTCACTTCGAAGAATATGGAGAG
ACAGTTGAGTCGGTGATGAAAGCACAAAAACGTTTCAAAATCCCTCGTCC
AGAGGAGTACAGTTCAGAGATCGTCAAAAAGAACGACATCCCACGACCGG
ATGACGAAGATGACGAACCTGTCGTACATCACAAAAAGAAGCGATCGAAA
GTCGCCAAGAAACAATACGTGCAATACCCACAGCAACAACAATTCGCTTA
CAATCCATACGCTAGCAATCTGATGGCTTCGGGTGACTTGTACGCACAAC
AAAATGCTGGCATGATGCAATTCCAGCAACCTGCTGCTGTAGCGCAACCA
ATGGCCACCGTTCCTGTGGCAAACATGGCCGCTGCAACTTCTCATGTGCA
AAATCTTGATGGTGCTATCGCAAGACCCATCGTCACTGAAAAAGTATGTG
ACGATCAATTTGCTTTATGTAACGAATACGCCAAGAACAATTATTGTACT
GACTATGAGAAGCAAATGAGAACACAATGTAGAAAGTCCTGCAACTTCTG
TAAATCAGAAACACCGATGACGTTATCGTCAGCAGCTACATCAACCAGTG
AAGATGACGTCAGTGGTTCTGGTGAATTCTCTGGATCTGGTGAACAAGAA
CCCATGCGAAGAAACTTGAAGGCGGCCGTCACTGGTAGCAAAAGACATGA
TATCCTTCAAGAAAGAGCGAAAATCCGAGTTCCCGATCGTGATGAATCGG
GTGACGGTTCCGGATCGGGATCTGCTGATGGCAGTGGAAGCGCAAGTGGC
TCAGGCGATGCTGATACCGACAACGGACCAATCGAAATTCCAATCCAACA
AAACCCAATGCAAGAATTCCACATCCCTTCATCGAGAAAAGACTCTTTTG
CTGGCCCACCCCCACAATCCGATTCGGATGATGGATCGGGTTCAGCAAGT
GGATCGGGTGATGAGTCAGGCGATTCTCAAGATAATGACCAGCAACCACA
GGTTGTAGAGGCACCAAAGCCAAAGATTTCGAAGAAATCTAAAATCCCAC
GAAGACCAAAGATTCACCAAGTTAGCAACAACAAACGAAGCAGAATTCCC
AATCGACCTGCTCAACCGGTGTTTTATCCAAAGATCGACTTGAAAGCCAT
CGCATCGTCTCTAGCTCATTACGAAGAAGCCGCTTTGGAATTGGCTGGTG
AATACCCAAAGATCTCTGATGCTGAAGTAACGGAATACACCCGCTCCTTC
ATTCCTCATCCGGAAAGCGACGATGAAGTCCGGGCCAACCGTAACCGACA
AAACATCCAAATCGCCAAAATCATTACTGCCGAACGTGCCCGTAAGAGCA
ATATTCCGCAATTCTTGAAAGTTACCGGTGATGTCAAAAAGCCGGAAAAG
GACGATTCAGATGCAGCTACTTTAGACTCTGTTCAACAGCGCTTCATTGT
TCCTGGAGTTGAGCCTACATTGAATGACTATTATGCAGAAACTGGCAAAT
TGAATCCTTTTGATAAAAAAGGAGCCAAGAATTACAAGAAATCACGTATT
GAGGGTTACAATGCAAATTACGATCCTTATGAATACTTGAGGAACATGCC
AGCTGGTGCATCCATGGAACCAATCATTGATCCTCACAAACGCGCGTCCA
TTCCTTCTGATCACTCGTACCCAGTCTTCTTGATGAAAGTCTCACCAACT
GATGAAGCCAAATACGTCGAAGAAAAAGCCGAAAGACGAGGTGAAATCCG
CCATTTCAATGCCGAGGGCGTCGAAATCAACAACGCTAAATACCAACAAA
TGTTACATGGCGGCCACCCTGAAATGGAAAGTGCCGTTCGTGCTCAAGTA
GCTGCCACACGCTCCAAGACACCTCAAGCTCCAGCTCCCCGCCCTCAAAT
TCCAGACTTCACAATCGCTAGCAAGAAAGCCACCCTTCCATCTTTCCCTG
CCGCCCCTGAAAGCGCCCCTGCTGCTTACCAACAACCATCAAACCCATAC
GCGAACAACTTCGCAGAAATGCAACAGAACGCCATGCAACAAGCTTCACT
CTTCCCAAATAACAATCAACAATTCAACTATGAACAACAACCAGGACCTA
ACAACATGAGGAGTAAGATGTTCAACGCTTTCTTCAATGTCGGTGCAAAC
AGTTCCCCGGAGGAGGGATCAGGATCAGGAGCAGGAGAAGGTCTAGCGAG
GATGAACGTGATCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000654XLOC_000654Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001205-proteinTCONS_00001205-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001205-exon-sc0000007-1575043694:1010783..1010922TCONS_00001205-exon-sc0000007-1575043694:1010783..1010922Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1575043694:1008611..1008771TCONS_00001205-exon-sc0000007-1575043694:1008611..1008771Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1575043694:1008322..1008474TCONS_00001205-exon-sc0000007-1575043694:1008322..1008474Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1575043694:1007673..1007903TCONS_00001205-exon-sc0000007-1575043694:1007673..1007903Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1575043694:1007406..1007543TCONS_00001205-exon-sc0000007-1575043694:1007406..1007543Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1575043694:1006866..1007258TCONS_00001205-exon-sc0000007-1575043694:1006866..1007258Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1575043694:1006380..1006493TCONS_00001205-exon-sc0000007-1575043694:1006380..1006493Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1575043694:1006126..1006221TCONS_00001205-exon-sc0000007-1575043694:1006126..1006221Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1575043694:1005268..1005627TCONS_00001205-exon-sc0000007-1575043694:1005268..1005627Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1575043694:1004435..1005154TCONS_00001205-exon-sc0000007-1575043694:1004435..1005154Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1575043694:1003914..1004294TCONS_00001205-exon-sc0000007-1575043694:1003914..1004294Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1575043694:1003637..1003717TCONS_00001205-exon-sc0000007-1575043694:1003637..1003717Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1575043694:1002880..1003117TCONS_00001205-exon-sc0000007-1575043694:1002880..1003117Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1510915933:1010783..1010922TCONS_00001205-exon-sc0000007-1510915933:1010783..1010922Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1510915933:1008611..1008771TCONS_00001205-exon-sc0000007-1510915933:1008611..1008771Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1510915933:1008322..1008474TCONS_00001205-exon-sc0000007-1510915933:1008322..1008474Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1510915933:1007673..1007903TCONS_00001205-exon-sc0000007-1510915933:1007673..1007903Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1510915933:1007406..1007543TCONS_00001205-exon-sc0000007-1510915933:1007406..1007543Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1510915933:1006866..1007258TCONS_00001205-exon-sc0000007-1510915933:1006866..1007258Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1510915933:1006380..1006493TCONS_00001205-exon-sc0000007-1510915933:1006380..1006493Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1510915933:1006126..1006221TCONS_00001205-exon-sc0000007-1510915933:1006126..1006221Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1510915933:1005268..1005627TCONS_00001205-exon-sc0000007-1510915933:1005268..1005627Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1510915933:1004435..1005154TCONS_00001205-exon-sc0000007-1510915933:1004435..1005154Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1510915933:1003914..1004294TCONS_00001205-exon-sc0000007-1510915933:1003914..1004294Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1510915933:1003637..1003717TCONS_00001205-exon-sc0000007-1510915933:1003637..1003717Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1510915933:1002880..1003117TCONS_00001205-exon-sc0000007-1510915933:1002880..1003117Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1491911889:1010783..1010922TCONS_00001205-exon-sc0000007-1491911889:1010783..1010922Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1491911889:1008611..1008771TCONS_00001205-exon-sc0000007-1491911889:1008611..1008771Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1491911889:1008322..1008474TCONS_00001205-exon-sc0000007-1491911889:1008322..1008474Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1491911889:1007673..1007903TCONS_00001205-exon-sc0000007-1491911889:1007673..1007903Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1491911889:1007406..1007543TCONS_00001205-exon-sc0000007-1491911889:1007406..1007543Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1491911889:1006866..1007258TCONS_00001205-exon-sc0000007-1491911889:1006866..1007258Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1491911889:1006380..1006493TCONS_00001205-exon-sc0000007-1491911889:1006380..1006493Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1491911889:1006126..1006221TCONS_00001205-exon-sc0000007-1491911889:1006126..1006221Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1491911889:1005268..1005627TCONS_00001205-exon-sc0000007-1491911889:1005268..1005627Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1491911889:1004435..1005154TCONS_00001205-exon-sc0000007-1491911889:1004435..1005154Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1491911889:1003914..1004294TCONS_00001205-exon-sc0000007-1491911889:1003914..1004294Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1491911889:1003637..1003717TCONS_00001205-exon-sc0000007-1491911889:1003637..1003717Clytia hemisphaericaexon
TCONS_00001205-exon-sc0000007-1491911889:1002880..1003117TCONS_00001205-exon-sc0000007-1491911889:1002880..1003117Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:1002880..1010922 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.71533	1.76429	2.49598	2.59455	1.57931	0.954345	32.3728	42.6439	19.5633	20.7808	32.1051	19.7428	67.2631	63.1501	47.792	125.306	71.0816	75.3949	0.439382	1.14945	56.7413	60.3758	45.606	51.5236	82.6187	107.332	10.4851	2.95814	0.61169	0.856921
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003582ShKT_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001205 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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