TCONS_00001214 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001214
Unique NameTCONS_00001214
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2748

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001214 ID=TCONS_00001214|Name=TCONS_00001214|organism=Clytia hemisphaerica|type=transcript|length=2748bp
GAGCttgaaccattgagtttcaagcccgaagggctagaggtcaatctctt
tggtaggatttgaagccaacaaatcctaccaaagttgcgcggccttgagc
gacccgcctggtttttacacaaatgacaggttgaaactaaaatttaacgc
ttaatttcgaaaaatatatcactcgaagacaaaggaattgctagattcaa
tccgtcatcaaaaatacggcgcatattttaaggcttcaatttttcttccc
tgagaaaggttagagattgacctctagcccttcgggcttgaaactcaatg
gcttGAACTACTACACTGAAACGAAATTAATATTTCACTGTCATGACAAC
GGGGCATTTATTTACATTCCCGATATTCTAAATCTCTACTGCGCACGCGC
ATGTTTTgatttgtgcttgattcaaaaTGTCTGACAtcactttgcaaaat
attagaCAAGATGTCATAAAATCTCGCAATTTGTAATGATTTGATGGTAA
TGGAGAAATCACAGTCTAATTGCAAGTGAAGATAACACAGAGATGAACAC
AGATATCGATCAACACATTTTGGTGAGGTATGAAATAAAGAAAAGACTTG
GAAAAGGGGCGTATGGTATTGTTTGGAAAGGTATTGACAGAAAAACTGGT
GAAATAGTTgcattaaaaaagatttttgatgcTTTTCGAAATCAAACGGA
TGCACAGAGAACATTTAGAGAGATATGCTTCTTGCAGGAATTTGGAAGTC
ATGACAATGTTATTAAACTGTTGAATGTGATAAAAGCTGACAATGATAAA
GACATTTACTTGGTGTTCGAATTTATGGACACTGACTTGCATAATGTTAT
CAAGAAAGGCAACATTCTGAAAGATGTGCACAAACGGTACATTATGTATC
AGCTAATGAAAGCAATCAATTTCATTCACTCTGGCAATGTAATCCACAGG
GATCTGAAGCCAAGCAACGTTTTACTGGATAGAGAATGTTTTATTAAAGT
ATGCGACTTTGGACTTGCGCGTTCTGTACAATGTTTAACCCTGGAACATG
GGGATCCAAGTTTGACAGATTACGTTGCAACACGTTGGTACCGAGCACCC
GAAATCCTCCTAGCTTCACCAAAATATACGAAAGGAGTGGACATGTGGTC
GATGGGGTGTATCCTGGGTGAAATGTTGCTCGGGAAACCCCTCTTCCCTG
GATCCTCAACTCTCAATCAAATCGAACGAATTATGGCCGTTATACCAACC
CCAAGTAGACAAGACATCGATAGTATCAAATCATCATACAGCACCTCACT
ACTCGACAAAGCAACCATGAGATCGCGTAAAAATCTACCGGACCTTTTCC
CGGATGCACCCAATGATGCACTTGATATGGTTCAATCACTTTTACAATTT
AATCCGGACAAACGAATGACAGCGGAAGAAGCTTTAGCACATCCGTACCT
AGCGAAATTCCATAACCCTGCAGAAGAGCATAGTCTGACGTATGACGTAG
TCCCACCAGTTGATGACGATGTTCAACTGTCTGTCGCTGAATATCGAACC
AAACTATACGATAGCATCATGCAAAAGAAGTTGGACATTCGAAGGCAGCG
ACGAACGctggaaagtgaagaaaaacctGCCTCAGCTTCAGGCGGGGTGG
GTTCACCAAAGGTTGGTGCGGTCCGCTCACAAGCCGCTCTTGCTAAAGCT
TCGTCCTCCTCACCGAGTCATAAAGCTGTTCGGACCACCAAATCTGCACC
AACAAAGAATGCACGTACACCGGCCGATCAACAGACTTACAAATCCAGCC
CTTCCAACATGCGTTCTCGTCCTATCTCATCACAGTATGATAGAAAAGCT
AATAATAATATCCTGACGCGCCCAGATAACAATTTACAGATTACCAGTAC
CTCCAAAgTGGCGCACCAGAGACCAGGACAATATTCTTCTCCGAAGGTTC
AACGAGTGGCCGGCAAAAAGCCCTCTTCAACGCAGGCAACGTCAGGTCTA
ACCATGTCAAGTTACACGCAAAGTCACGCCTCTGTCAGTAAAAGTACACT
GGATGCAATCCATGGACTGTCAATCAAATAGGGCTGTTGAAATAATGACA
AACAATCTATTATAATGCACTTATTGAAATGAAACGGAAAAAAGTTTCCC
CGAAAAGTCAATGAGTACGAGAATATTTAGTCCGCACTTTATTGTCAGAA
CCNCTTCTTCCGAAAAGTCAATGAGTACGAGAATATTAAGTCCACCCTTT
ATTGTCAGAACCTTAAAATTGACGATTCTTCGTAAGATTCTTAGTTTTct
ttgaaacatttttgtaaaGTCTTTATCTGCGACATTTTACTTCGAATTTA
GTCTTTTTCAACCAGAGTTAGGGTCTTGACTTAAAATGATTTTAACAGAA
AATAAAGgggagaaaattgaaaatatttaagttaAATTATACTCagtaga
gaaatctattttgatgtttttgtgtAAATGCGCGTATTGTATcataaatt
ttttgtcaattttttagaTGTAATATTACATTAGtagagaaatttttatt
tcatggcttttaattcaattttttaagaaagtcTTCGAAGACAAACATTT
CAGTCGAATTTCCACACGTACAACGTTTCAAGGTCTCATTGATGGAGGTC
CCTGAAACTCAATTTTTAGATGTTGTTAGAAATCAAAATGTATAGAAAGT
TTTTGTACATGCATTTTAATTTTATGCTCAAGAAATACAAActtcaaa
Run BLAST on NCBI

protein sequence of TCONS_00001214-protein

>TCONS_00001214-protein ID=TCONS_00001214-protein|Name=TCONS_00001214-protein|organism=Clytia hemisphaerica|type=polypeptide|length=512bp
MNTDIDQHILVRYEIKKRLGKGAYGIVWKGIDRKTGEIVALKKIFDAFRN
QTDAQRTFREICFLQEFGSHDNVIKLLNVIKADNDKDIYLVFEFMDTDLH
NVIKKGNILKDVHKRYIMYQLMKAINFIHSGNVIHRDLKPSNVLLDRECF
IKVCDFGLARSVQCLTLEHGDPSLTDYVATRWYRAPEILLASPKYTKGVD
MWSMGCILGEMLLGKPLFPGSSTLNQIERIMAVIPTPSRQDIDSIKSSYS
TSLLDKATMRSRKNLPDLFPDAPNDALDMVQSLLQFNPDKRMTAEEALAH
PYLAKFHNPAEEHSLTYDVVPPVDDDVQLSVAEYRTKLYDSIMQKKLDIR
RQRRTLESEEKPASASGGVGSPKVGAVRSQAALAKASSSSPSHKAVRTTK
SAPTKNARTPADQQTYKSSPSNMRSRPISSQYDRKANNNILTRPDNNLQI
TSTSKVAHQRPGQYSSPKVQRVAGKKPSSTQATSGLTMSSYTQSHASVSK
STLDAIHGLSIK
Run BLAST on NCBI

transcript from alignment at sc0000007:1086988..1097129-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001214 ID=TCONS_00001214|Name=TCONS_00001214|organism=Clytia hemisphaerica|type=transcript|length=10142bp|location=Sequence derived from alignment at sc0000007:1086988..1097129- (Clytia hemisphaerica)
GAGCTTGAACCATTGAGTTTCAAGCCCGAAGGGCTAGAGGTCAATCTCTT
TGGTAGGATTTGAAGCCAACAAATCCTACCAAAGTTGCGCGGCCTTGAGC
GACCCGCCTGGTTTTTACACAAATGACAGGTTGAAACTAAAATTTAACGC
TTAATTTCGAAAAATATATCACTCGAAGACAAAGGAATTGCTAGATTCAA
TCCGTCATCAAAAATACGGCGCATATTTTAAGGCTTCAATTTTTCTTCCC
TGAGAAAGGTTAGAGATTGACCTCTAGCCCTTCGGGCTTGAAACTCAATG
GCTTGAACTACTACACTGAAACGAAATTAATATTTCACTGTCATGACAAC
GGGGCATTTATTTACATTCCCGATATTCTAAATCTCTACTGCGCACGCGC
ATGTTTTGATTTGTGCTTGATTCAAAATGTCTGACATCACTTTGCAAAAT
ATTAGACAAGATGTCATAAAATCTCGCAATTTGTAATGATTTGATGGTAA
TGGAGAAATCACAGTCTAATTGCAAGTGAAGATAACACAGAGATGAACAC
AGATATCGATCAACACATTTTGGTGAGGTATGAAATAAAGAAAAGACTTG
GAAAAGGGGTACGTTTTTCTCTGCTGAAGCCTTCATATTTACCTTTTTTT
TCTAGCTTTGTTTATCTTTGATCTTGTATTGAATTTTAGGACACCAAACT
TTTTTCTCGTTTGTTTTCACGAAGTTATTTCTTTTTCTTTCTGACTGATC
ATTACCGTAAGTTGGTCTAATATCGACATCCCTCGTCTAATTCCGACACC
CTTCTTTAGTTTAGAGACAGGAATTATATGAAAGCTTGAATCACTGCATT
GCTGATTGAAAAAGGATTATTCCTCTCTGACCCACTAAGCAAGGAAAAAC
AGTTTCAACCTTTCAATCAATTTCAGCTGATAAATAGGGTGTCAGAATTA
GAGGAGGGGTGTCGACATTAGACCAAGTTACGGTATATTTTTGTTGTGTT
ACTTTTGACAGTAAGGTGATTTCCAGACAATATCTGGTCCTTTAAATGTT
TATCAGTAAGACCTTCTGAGTAAGCTGGTTAAAAAAATAACTCTAACTAC
ATTGTAGACCAGTAATTTTGTGAGCGTAGTGCAAGAATGACTTTGAGCAG
GAGGTTTGGGGGAATTTTAAGGCCTAACAAGTGGGAGTTCAGGGCCCAGC
GCAGCGCTCTCTTACAAAATTTTGGAGTCTGAAATGACCCTAAACTTTGC
TAAACACCTGTTTTGATTTAATGAAAAACAACTAAAGAAATGTAAAAATA
CTTAAAAAGCCTATAAAGCCTACCGTGAAGTCGGGTAACATGTTAGCCTC
CACTGATGCAAGTTGGTATAGCCTTCAAGTTTTACCCTGACCAAGTTAAA
AGTACCGTAAGTTAGTCTAATTTCAACATCCTTTTTTAGAGATAGGAATG
ATAGAAAAGTTGGGATCAATGATGACTCCTCAACTGATTGCTAAGCAAAG
AAAATTAGTTTAATCAGCGATTTCGGACCATCCTATCATTCCTATCTCTA
AAGAAGGGTGACAAAATTAGAAGAGGGATGTCAACATTAGACCAACTTAC
GGTAAGCTTCAGAATGACCAGCGGCTATTTACTTCAGGCGGGGATGGTAC
AAAGTTAAGCTATGGTAAACTTGAATCGCTCAATAATCGCACAGAAATCA
CCCCCGTGTAAAGCTAACAGATCTGAAAATACGACGCTAGATTTTAGATG
CAGATATCTGTGTTGTAGAGCGCGAGTGAGCGCGTGTACACTGGCGCGTG
TTTAACTATAGAATTTATTTCATATTTCAATTTAAAAGCCTACTCGGTGC
GGAAGAGAAATCGTGTATTTTTTAATACGCGGTTCATTAACTCAAATCAA
ATGACTTTGGAGGTTCAGTGAAATGGTGGCTGAATTGCCATCCCATGTTT
TGTCAGATAGTCCCAAGTTAGAGCAGTTGACGGTAATAGAAAACCAGAAT
GCGGATCTTCTATAAATATTAACTATAGTAATGAAAACTGTAATGTGCAC
TCTCAAACATCAATTGATGACAGATGGTACAAAATTTAATAAAGGAACTG
TCATTATTTGATAATCGAACAGAAGATTTTCTGTCAAGAATCTTGTAAAC
ATTCAAACAAATTCCATAAAGATTATCTGTTGTAGCTAAATCAAAATGCT
ACCATTTAACAAACATACCAGGTGCGCCACAAAAAATTTTCTCTCTTTGA
AACTAATTTTCAAGAAATCTAAAAATTTTAAAAGAGCCATTCCTATTTCA
TTGGAAAGAAGAAAGATAAACATAAATTTTGATGGGTCATTTATTAAATT
CGATTCACTAGATCAAAAGTTATGCTCAATTGAATGAAAAACTTACTTTC
GGGATGTGCTCAAAAACGTTGAAAATCGACTTATCAAATTAAACAGAAGC
ATAATTACATGATACATCAGTACTTTCGTTTCAGTCATTAAAAATGATAA
TAAGCTGTCTAAATGACCTTTTGTTATNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNAAATTTGGCAAATTTTTAGCAGGGGACC
ACCCTTTTTTGCAGTTAGTACATCTGAGTACTAAGTGATTTTATCCAATT
CATATGGCACACCACCACGGTACTAATTGGCATGATGTCTTGTACTAACT
GCTTCACCCCCCCTGGTTTTAAGGTAGATCCAGTCTTACTTAGACTTCAT
CCAGTCGAGAACCAAAAATCTGAGGAAAATTTCGGTAAAAGTAAATTAAA
TTGATTTTGATGAAGATTTTAAACAGTTTTAAACCCTTTCGACCCTTCAG
TTTCAAAATTTATGTGTTTATTTACTGAGAAATGCTCTTAATCATGTAAA
GGCTATTGCGATTGCCAGATTTAAAATAAAAAATTGATAGGTCGATTTTT
AACATTTTCTTATCCAATTGAGCATAACTTTTGATCTAATGAATCAAATT
TAATAAATGACCCATGAAAATTTAAGTCTATCTTTCTTCTTTCCAATGAA
ATAGGAATGGCTCTTTTGAAAGTTTTAGATTTTGAGAAAATTAGTTTTAA
AGAGAGAAACTTTTTTGTGGCGCACCCGGTATGCGCNATTTAATAAATGA
CCCATGAAAGTTTAAGTCTATCTTTCTTCTTTCCAATGAAATAGGAATGG
CTCTTTTGAAAGTTTTAGATTTTGAGAAAATTAGTTTTAAAGAGAGAAAC
TTTTTTGTGGCGCACCCGGTATGCGCTGTTCCAGGATTGATCCCATTAAA
TAAAGCCACACCCACAAAAACACCAGCAAACAGCCTTAAAGGTTGACAAA
TTTTAATCTGTCAATCAATTTCTCAAGTAAAGAGTACACAGATTAAACAA
ATAATATGATAACAATAAGGTTTTAATACAGAAATACCAAATTAAATTGG
ACATCTAAAATGCTATTCACAATTTTAAAATGCCCATTCACAGAGTTTTT
TAGCTGCTAACTAAGAAAACAAAAGAGCCATCTGGGTGGATTTCCCTTTA
ACGTTAAAAGCTATGAACTTTGAACAAATCGTGAACATACTAAGGACACT
TGTGTTGATTTCCAATTTTGTCAATGTTTTGCAAATAGAACAAAGGTAAC
AATTGTAATTGATATTTATTCGCATCTATCTCATATATTTGGTTGATTTA
CAGCAGGTTGTTCAGCCTATCCTCACAGCTGCTAGTACAATTAAGTCATG
TAAGCAAATGCTTAATAAACATTGCAATTTTTAATTTCTTAGCAATAAAC
CTTGGATATTTGGCAAAAGTAAAACTGAGCTTTATTTAGCTGCAACAATA
AATTCTCTAATTCCTGTCATAGTGTCAAATATATTTAGCAGATTAGTGCG
CCTCATTAAAAAATTTTCTGTCTTGTCTTCTGCATGGCATAATATCCGAG
TCTCAAAATTAAAAAAAAAATTACCTCAGCCATATAATAATGTAAAATTA
CACATCTTGATGTACCCAAACAATTTTGTATCCCTTTGATTTGAAAGGGG
GAATTCACTGTATGTTTCCTCTCTTGAAACCACTAAGATTATTGGCAAAA
TTTTAAACTTTAAGTTGTGAAAAAATGGCCATCATGTTTTCACATTTTTT
AAATCCTCCAGCGGACCTGATAGTATTGGATTCATTTTTTGATAAATCTA
ATAATTTCCTGAAATTACCTTTATCTTGTTTGTTGACTGATAGCATTTTT
TATTTTGTTTGTAATAATGTATTTTTTACATTCAAAGCACATTAACTTGT
ATACACAAATAACCCCATAAAGAACTTGTTTAGAATTTACCAGGAAGGTA
TGACGTCAAATGTCTATATCTGTAAGAAAATCCATACAACTACTTCAGGC
ATTCAATCTCAATCCTTCCTGGTAATCTCAGTCTGTCTGGTCGTTGATGT
TCACCAATTTGTTACAATTCTTTTTCAGGCGTATGGTATTGTTTGGAAAG
GTATTGACAGAAAAACTGGTGAAATAGTTGCATTAAAAAAGATTTTTGAT
GCTTTTCGAAATCAAACGGATGCACAGGTTCGTTTTACTTTTCATCTTCT
GCATATTCTGTATTTTATTAGGCTGTTAATTCTGAAGGTATCCAAGTAAT
TGGCACCAGCTTTATTTTGTTTCAATCCTATTTCACAGTTCTGTCATTGT
TTTCTTTTCACAGAGAACATTTAGAGAGATATGCTTCTTGCAGGTAAGTT
AATTTCTATTTCTATTTCATAATTAGTAGCTTTTCTGCATTTTGAAACAT
ATGTAGTTAGTAGTATTTTTAATTTGTTGTTGAATCTTTTTTCAAAACCA
TCATCACGATCGAATTGTGGTATATATCAAACTTCATTACATGCATTACA
TTACATTACATTTACTTGGATGTCTAGAAGATTTGCTCGATATTGCTACT
CAATATTAAAACATTGTTGTTCTGTTTAGGAATTTGGAAGTCATGACAAT
GTTATTAAACTGTTGAATGTGATAAAAGCTGACAATGATAAAGACATTTA
CTTGGTGTTCGAATTTATGGGTAAGTGCTTTCATTGATTATCAATAATTT
TATCAATCGACCATGTATATTTTTTGTTTTGATAAATTTGGCCCTGTATG
AAATTTGGTTTTTGATATTTTTAATTTTTCATTTCTCAGACACTGACTTG
CATAATGTTATCAAGAAAGGCAACATTCTGAAAGATGTGCACAAACGGTA
CATTATGTATCAGGTATGTAAATCTCATCTGAACGTTTCCAAAATATAAG
GGAAGGACATGTTATTAATGGGATCTCAATCTTATACAAGTCATGTTTCA
AAATGATGGGTTTATGTTCATGTTTATGTTCATGTTTTATGCTCATTTTT
TCTAGCTAATGAAAGCAATCAATTTCATTCACTCTGGCAATGTAATCCAC
AGGGATCTGAAGGTATACTTTTTTCTAAGGTCTTTTCGCATTTTTCCTGT
CGGTTTCTTTTAAATGTGTATAATAAAAAAATGATTTTTCAATTATTTAT
CTGATTCAACAAACTATCAATAAAATATGACGTCAATTGATCAATTTTGC
AAGTATTTTTCTCACATACAAAAATGTACTGAATAGTCGATTGAGTGGAA
ATAAACCGTACTGTTTATTTATTTATTTACTTTCAGCCAAGCAACGTTTT
ACTGGATAGAGAATGTTTTATTAAAGTAAGAGCAAATTTTTTTATTCCAT
TCAATTCAAACCCAACTCTTCCTTGTTGCAAACTTCTGCAAAAATTCCAT
GATCTGTAAATATTTTTTAAAAACAAAGTCATAGAGTGTAAGAATTACAC
TTTTTGTGACGGATTTCCCTAAAGTTCCTTGAAATTCTTATCGGAAGNCT
TAAAAACAAGAGTGTAAGAATTACACTTTTTGTGACGGATTTCCCTAAAG
TTCCTTGAAATTCTTTTCGGAAGAAATATCTGAAACGTTTCCATTTCTTT
AAAAATGAAAATAACATTGGGGCGTGACCCCCTTCCGATTAGTGCTATAC
TTAGCACAACAAAAATGCCCCTAGGTTTCTCACGCTTCACCCCAAGTTTT
AGGCTGCCTAGGTTCTTCGCCTTGTCTATTTAAGTGATTGAAACTCGCAC
ATCCTTTCCTACACACTTTATTAACATTTTATTCTGTTAAAGGTATGCGA
CTTTGGACTTGCGCGTTCTGTACAATGTTTAACCCTGGAACATGGGGATC
CAAGTTTGACAGATTACGTTGCAACACGTTGGTACCGAGCACCCGAAATC
CTCCTAGCTTCACCAAAGTAAGGGGATCTATTTCACCCAAAGTCATTAGT
TTACTATCTTGACTGAAACCTATGAGGTTAACTAACTAACTAACAAGACC
CTTTTTGGAAATATTTATGTATAAAATGTTGTAAAAATGCAATTGTTTTG
AACTAATAAGACTGATGAGTTTGCTTCAAAATGTGTTTAGAAGGTTGCAG
AAATCAGCAGAAATAGGTAAAAATTGCTGATATTGAAAGGGCCCACCATG
ATAGTTGGGAAGAGCAATCAAATATCACCAAAATATTATAATTTCTCTTA
TTATCGTCTAGATATACGAAAGGAGTGGACATGTGGTCGATGGGGTGTAT
CCTGGGTGAAATGTTGCTCGGGAAACCCCTCTTCCCTGGATCCTCAACTC
TCAATCAAATCGAACGAATTATGGCCGTTATACCAACCCCAAGTAGACAA
GGTTGGTATTTCCTTTGATATCATTTGTATCTGGTAGTTTATAAACTTAG
AAAGTTTACATGTTGTATAGTGTATGTAGCACTGAGCTCAAAGACTGAAA
TACTCTCAATTCCATTGATCAATAGTTTTTAATAGAGATTATAATGCAAC
ATTTATCTCCCTTTAGACATCGATAGTATCAAATCATCATACAGCACCTC
ACTACTCGACAAAGCAACCATGAGATCGCGTAAAAATCTACCGGACCTTT
TCCCGGATGCACCCAATGATGCACTTGATATGGTTCAATCACTTTTACAA
TTTAATCCGGACAAACGAATGACAGCGGAAGAAGCTTTAGCACATCCGTA
CCTAGCGAAATTCCATAACCCTGCAGAAGAGCATAGTCTGACGTATGACG
TAGTCCCACCAGTTGATGACGATGTTCAACTGTCTGTCGCTGAATATCGA
ACCAAACTATACGATGTATGTATGATTATGTTGTTTCTAAAACTATGAGA
AATTTTGAGTTTGCCAGAATAATTTACTAATAAAAGTGAAGACAAGAAAC
TTAATTCTATTCATCTTGGCTTTTTGATGATTTCGATTTTGCTTTTAGAA
AAGATGAGTTGAGTTTGAGCAAGTTTCGAATCTCCATAAAGTAAATAATT
CACACAACTCTTGTCTATTTTCAGAGCATCATGCAAAAGAAGTTGGACAT
TCGAAGGCAGCGACGAACGCTGGAAAGTGAAGAAAAACCTGCCTCAGCTT
CAGGCGGGGTGGGTTCACCAAAGGTTGGTGCGGTCCGCTCACAAGCCGCT
CTTGCTAAAGCTTCGTCCTCCTCACCGAGTCATAAAGCTGTTCGGACCAC
CAAATCTGCACCAACAAAGAATGCACGTACACCGGCCGATCAACAGGTAT
TTATGGTCTTCCTCTAAAACCTTGAATTCAATGCACTTTCAACATTTAAN
GCCGAGTCATAAAGCTGTTCGAACCACCAAATCTGCACCAACAAAGAATG
CACGTACACCGGCCGATCAACAGGTATTTATGGTCTTCCTCTAAAACCTT
GAATTCAATGCACTTTCAACATTTAATGATCCATCACCATCAGACATCCA
TACATGATTACTGTTCACAACCTCATACATTCCACCTTTTCCGTCCACAC
ACATTTCTAATAAAATTGACCCTTCTCTCTTTTCCTTTTGTAGACTTACA
AATCCAGCCCTTCCAACATGCGTTCTCGTCCTATCTCATCACAGTATGAT
AGAAAAGCTAATAATAATATCCTGACGCGCCCAGATAACAATTTACAGAT
TACCAGTACCTCCAAAGTAAGACATTTTTTGTAATTCCTTCCCTTTCACA
ACCCTTGTTCCAATTCACCCATCCTCCCCATGTCATCGACAATGTTTTAT
GACGGCTGACACTTATGTGTAAAGGAAAGACCAGAACAATTTGCCATCCT
TTTGTTTAATGGATTCATCAAACTCCTCAAAGCCTCTTTTCATAATTCTT
GCAAGTCAGTTTTCCATGGTATAAGGCTCTAACAGTCAGTATGGATTTAC
TCATTCGAGTGTGAAACTTTTCGATCTGAATAACTTTTTTGTTTTCATTA
GGTGGCGCACCAGAGACCAGGACAATATTCTTCTCCGAAGGTTCAACGAG
TGGCCGGCAAAAAGCCCTCTTCAACGCAGGCAACGTCAGGTCTAACCATG
TCAAGTTACACGCAAAGTCACGCCTCTGTCAGTAAAAGTACACTGGATGC
AATCCATGGACTGTCAATCAAATAGGGCTGTTGAAATAATGACAAACAAT
CTATTATAATGCACTTATTGAAATGAAACGGAAAAAAGTTTCCCCGAAAA
GTCAATGAGTACGAGAATATTTAGTCCGCACTTTATTGTCAGAACCNCTT
CTTCCGAAAAGTCAATGAGTACGAGAATATTAAGTCCACCCTTTATTGTC
AGAACCTTAAAATTGACGATTCTTCGTAAGATTCTTAGTTTTCTTTGAAA
CATTTTTGTAAAGTCTTTATCTGCGACATTTTACTTCGAATTTAGTCTTT
TTCAACCAGAGTTAGGGTCTTGACTTAAAATGATTTTAACAGAAAATAAA
GGGGAGAAAATTGAAAATATTTAAGTTAAATTATACTCAGTAGAGAAATC
TATTTTGATGTTTTTGTGTAAATGCGCGTATTGTATCATAAATTTTTTGT
CAATTTTTTAGATGTAATATTACATTAGTAGAGAAATTTTTATTTCATGG
CTTTTAATTCAATTTTTTAAGAAAGTCTTCGAAGACAAACATTTCAGTCG
AATTTCCACACGTACAACGTTTCAAGGTCTCATTGATGGAGGTCCCTGAA
ACTCAATTTTTAGATGTTGTTAGAAATCAAAATGTATAGAAAGTTTTTGT
ACATGCATTTTAATTTTATGCTCAAGAAATACAAACTTCAAA

Coding sequence (CDS) from alignment at sc0000007:1086988..1097129-

>TCONS_00001214 ID=TCONS_00001214|Name=TCONS_00001214|organism=Clytia hemisphaerica|type=CDS|length=1539bp|location=Sequence derived from alignment at sc0000007:1086988..1097129- (Clytia hemisphaerica)
ATGAACACAGATATCGATCAACACATTTTGGTGAGGTATGAAATAAAGAA
AAGACTTGGAAAAGGGGCGTATGGTATTGTTTGGAAAGGTATTGACAGAA
AAACTGGTGAAATAGTTGCATTAAAAAAGATTTTTGATGCTTTTCGAAAT
CAAACGGATGCACAGAGAACATTTAGAGAGATATGCTTCTTGCAGGAATT
TGGAAGTCATGACAATGTTATTAAACTGTTGAATGTGATAAAAGCTGACA
ATGATAAAGACATTTACTTGGTGTTCGAATTTATGGACACTGACTTGCAT
AATGTTATCAAGAAAGGCAACATTCTGAAAGATGTGCACAAACGGTACAT
TATGTATCAGCTAATGAAAGCAATCAATTTCATTCACTCTGGCAATGTAA
TCCACAGGGATCTGAAGCCAAGCAACGTTTTACTGGATAGAGAATGTTTT
ATTAAAGTATGCGACTTTGGACTTGCGCGTTCTGTACAATGTTTAACCCT
GGAACATGGGGATCCAAGTTTGACAGATTACGTTGCAACACGTTGGTACC
GAGCACCCGAAATCCTCCTAGCTTCACCAAAATATACGAAAGGAGTGGAC
ATGTGGTCGATGGGGTGTATCCTGGGTGAAATGTTGCTCGGGAAACCCCT
CTTCCCTGGATCCTCAACTCTCAATCAAATCGAACGAATTATGGCCGTTA
TACCAACCCCAAGTAGACAAGACATCGATAGTATCAAATCATCATACAGC
ACCTCACTACTCGACAAAGCAACCATGAGATCGCGTAAAAATCTACCGGA
CCTTTTCCCGGATGCACCCAATGATGCACTTGATATGGTTCAATCACTTT
TACAATTTAATCCGGACAAACGAATGACAGCGGAAGAAGCTTTAGCACAT
CCGTACCTAGCGAAATTCCATAACCCTGCAGAAGAGCATAGTCTGACGTA
TGACGTAGTCCCACCAGTTGATGACGATGTTCAACTGTCTGTCGCTGAAT
ATCGAACCAAACTATACGATAGCATCATGCAAAAGAAGTTGGACATTCGA
AGGCAGCGACGAACGCTGGAAAGTGAAGAAAAACCTGCCTCAGCTTCAGG
CGGGGTGGGTTCACCAAAGGTTGGTGCGGTCCGCTCACAAGCCGCTCTTG
CTAAAGCTTCGTCCTCCTCACCGAGTCATAAAGCTGTTCGGACCACCAAA
TCTGCACCAACAAAGAATGCACGTACACCGGCCGATCAACAGACTTACAA
ATCCAGCCCTTCCAACATGCGTTCTCGTCCTATCTCATCACAGTATGATA
GAAAAGCTAATAATAATATCCTGACGCGCCCAGATAACAATTTACAGATT
ACCAGTACCTCCAAAGTGGCGCACCAGAGACCAGGACAATATTCTTCTCC
GAAGGTTCAACGAGTGGCCGGCAAAAAGCCCTCTTCAACGCAGGCAACGT
CAGGTCTAACCATGTCAAGTTACACGCAAAGTCACGCCTCTGTCAGTAAA
AGTACACTGGATGCAATCCATGGACTGTCAATCAAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000658XLOC_000658Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001214-exon-sc0000007-1575043694:1096522..1097129TCONS_00001214-exon-sc0000007-1575043694:1096522..1097129Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1575043694:1091603..1091701TCONS_00001214-exon-sc0000007-1575043694:1091603..1091701Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1575043694:1091437..1091466TCONS_00001214-exon-sc0000007-1575043694:1091437..1091466Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1575043694:1091110..1091200TCONS_00001214-exon-sc0000007-1575043694:1091110..1091200Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1575043694:1090917..1090990TCONS_00001214-exon-sc0000007-1575043694:1090917..1090990Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1575043694:1090718..1090774TCONS_00001214-exon-sc0000007-1575043694:1090718..1090774Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1575043694:1090455..1090493TCONS_00001214-exon-sc0000007-1575043694:1090455..1090493Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1575043694:1089863..1089987TCONS_00001214-exon-sc0000007-1575043694:1089863..1089987Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1575043694:1089429..1089568TCONS_00001214-exon-sc0000007-1575043694:1089429..1089568Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1575043694:1088965..1089263TCONS_00001214-exon-sc0000007-1575043694:1088965..1089263Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1575043694:1088534..1088755TCONS_00001214-exon-sc0000007-1575043694:1088534..1088755Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1575043694:1088114..1088236TCONS_00001214-exon-sc0000007-1575043694:1088114..1088236Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1575043694:1086988..1087828TCONS_00001214-exon-sc0000007-1575043694:1086988..1087828Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1510915933:1096522..1097129TCONS_00001214-exon-sc0000007-1510915933:1096522..1097129Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1510915933:1091603..1091701TCONS_00001214-exon-sc0000007-1510915933:1091603..1091701Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1510915933:1091437..1091466TCONS_00001214-exon-sc0000007-1510915933:1091437..1091466Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1510915933:1091110..1091200TCONS_00001214-exon-sc0000007-1510915933:1091110..1091200Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1510915933:1090917..1090990TCONS_00001214-exon-sc0000007-1510915933:1090917..1090990Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1510915933:1090718..1090774TCONS_00001214-exon-sc0000007-1510915933:1090718..1090774Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1510915933:1090455..1090493TCONS_00001214-exon-sc0000007-1510915933:1090455..1090493Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1510915933:1089863..1089987TCONS_00001214-exon-sc0000007-1510915933:1089863..1089987Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1510915933:1089429..1089568TCONS_00001214-exon-sc0000007-1510915933:1089429..1089568Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1510915933:1088965..1089263TCONS_00001214-exon-sc0000007-1510915933:1088965..1089263Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1510915933:1088534..1088755TCONS_00001214-exon-sc0000007-1510915933:1088534..1088755Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1510915933:1088114..1088236TCONS_00001214-exon-sc0000007-1510915933:1088114..1088236Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1510915933:1086988..1087828TCONS_00001214-exon-sc0000007-1510915933:1086988..1087828Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1491911889:1096522..1097129TCONS_00001214-exon-sc0000007-1491911889:1096522..1097129Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1491911889:1091603..1091701TCONS_00001214-exon-sc0000007-1491911889:1091603..1091701Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1491911889:1091437..1091466TCONS_00001214-exon-sc0000007-1491911889:1091437..1091466Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1491911889:1091110..1091200TCONS_00001214-exon-sc0000007-1491911889:1091110..1091200Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1491911889:1090917..1090990TCONS_00001214-exon-sc0000007-1491911889:1090917..1090990Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1491911889:1090718..1090774TCONS_00001214-exon-sc0000007-1491911889:1090718..1090774Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1491911889:1090455..1090493TCONS_00001214-exon-sc0000007-1491911889:1090455..1090493Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1491911889:1089863..1089987TCONS_00001214-exon-sc0000007-1491911889:1089863..1089987Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1491911889:1089429..1089568TCONS_00001214-exon-sc0000007-1491911889:1089429..1089568Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1491911889:1088965..1089263TCONS_00001214-exon-sc0000007-1491911889:1088965..1089263Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1491911889:1088534..1088755TCONS_00001214-exon-sc0000007-1491911889:1088534..1088755Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1491911889:1088114..1088236TCONS_00001214-exon-sc0000007-1491911889:1088114..1088236Clytia hemisphaericaexon
TCONS_00001214-exon-sc0000007-1491911889:1086988..1087828TCONS_00001214-exon-sc0000007-1491911889:1086988..1087828Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001214-proteinTCONS_00001214-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:1086988..1097129 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.3118	14.8092	38.9575	42.3715	93.2787	69.9356	48.887	52.3592	31.1427	39.8456	26.0191	21.3643	11.9366	12.8866	10.9129	15.6297	11.8371	12.2128	11.8102	16.9778	13.0383	10.9125	13.7671	14.4778	53.3921	41.8673	12.2606	13.0811	11.7948	11.8416
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000719Prot_kinase_dom
IPR017441Protein_kinase_ATP_BS
IPR003527MAP_kinase_CS
IPR008271Ser/Thr_kinase_AS
IPR011009Kinase-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004672protein kinase activity
GO:0005524ATP binding
GO:0004707MAP kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
molecular_function GO:0005524 ATP binding
molecular_function GO:0004707 MAP kinase activity
molecular_function GO:0004672 protein kinase activity
Blast
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BLAST of TCONS_00001214 vs. Swiss-Prot (Human)
Match: MK15 (Mitogen-activated protein kinase 15 OS=Homo sapiens GN=MAPK15 PE=1 SV=1)

HSP 1 Score: 428.713 bits (1101), Expect = 9.454e-139
Identity = 201/345 (58.26%), Postives = 268/345 (77.68%), Query Frame = 3 
Query:  543 MNTDIDQHILVRYEIKKRLGKGAYGIVWKGIDRKTGEIVALKKIFDAFRNQTDAQRTFREICFLQEFGSHDNVIKLLNVIKADNDKDIYLVFEFMDTDLHNVIKKGNILKDVHKRYIMYQLMKAINFIHSGNVIHRDLKPSNVLLDRECFIKVCDFGLARSVQCLTLEHGDPSLTDYVATRWYRAPEILLASPKYTKGVDMWSMGCILGEMLLGKPLFPGSSTLNQIERIMAVIPTPSRQDIDSIKSSYSTSLLDKATMRSRKNLPDLF-PDAPNDALDMVQSLLQFNPDKRMTAEEALAHPYLAKFHNPAEEHSLTYXXXXXXXXXXQLSVAEYRTKLYDSIMQ 1574
            M T +D  I+ RY ++++LG+GAYGIVWK +DR+TGE+VA+KKIFDAFR++TDAQRTFREI  LQEFG H N+I LL+VI+A+ND+DIYLVFEFMDTDL+ VI+KG +L+DVH R I YQL++A  F+HSG+V+HRD KPSNVLLD  C +K+CDFGLARS+  L     D ++T+YVATRWYRAPE+LL+S +YT GVDMWS+GCILGEML G+PLFPG+STL+Q+E I+  IP PS +D+ ++ S    S+L +   R R+ L  L  PD   +ALD+++ LL F PDKR++A +AL HPY+ +FH P++E +   DV P   + VQLSV EYR+++Y  I++
Sbjct:    1 MCTVVDPRIVRRYLLRRQLGQGAYGIVWKAVDRRTGEVVAIKKIFDAFRDKTDAQRTFREITLLQEFGDHPNIISLLDVIRAENDRDIYLVFEFMDTDLNAVIRKGGLLQDVHVRSIFYQLLRATRFLHSGHVVHRDQKPSNVLLDANCTVKLCDFGLARSLGDLPEGPEDQAVTEYVATRWYRAPEVLLSSHRYTLGVDMWSLGCILGEMLRGRPLFPGTSTLHQLELILETIPPPSEEDLLALGSGCRASVLHQLGSRPRQTLDALLPPDTSPEALDLLRRLLVFAPDKRLSATQALQHPYVQRFHCPSDEWAREADVRPRAHEGVQLSVPEYRSRVYQMILE 345
The following BLAST results are available for this feature:
BLAST of TCONS_00001214 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MK159.454e-13958.26Mitogen-activated protein kinase 15 OS=Homo sapien... [more]
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