TCONS_00001508 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001508
Unique NameTCONS_00001508
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1715

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001508 ID=TCONS_00001508|Name=TCONS_00001508|organism=Clytia hemisphaerica|type=transcript|length=1715bp
GGCCAGTATTCAATTAGCTAATAGACTGTATGGTATTATTGGCATTAAAT
TAATTAACGTAATGAGTCTTTTGTATTATGTAAGAGGAAATGGATTAAAA
CGAAACAGAATTACTTTATTATATTTGTTTTCACCAGCCAGAAGTCGAAA
GAAGAATCGCTGTCTGCGTTTAATACTGTATCACTTCACATTTTTTTGGA
TAACTGTTTCAACTGAGATATTATActgaaattttgatgttcaaatttta
atttttttttgcattgagTGATATTGGGGTATTTACCGAAAACGGAATTT
TGTGCTGTCAAAGATGTCAACTCAATTTTCATTCACAagttttcttcaag
ttcttcTATTGTTAAAAATTCAAGGTCCGCAAACTTCAGATGCGTACAGG
ACAGCTCGATGTATAGAGGAAGTTTGTTCGAGCACGCTAAAATGCGATGT
TGCATTTTCATACAAGCCAAGTTTGAAGGGTCACAGATATTGCATTGGCG
ATGATAAATATATACAATGCCGTGATTGTCGCCTGGAAGAAGAAACTATA
TCAGTGAGTGTGCACATTAGTGGTATACAAGATCACACCAAATTACAGGG
ATATTCCAGGACGCTCTTGCAATTTGTTAATCAGTGGTGTCCGAAAATTG
GATGCAatgttttatatttcaaaaatgttccaaaactTTCTAGatttAAT
TTCTTCACATACCCTGGTGTATGGGACATGGCGACAACAACTCTAATAGC
AGATAACATTCATACAAAACTTTATTTCATCAAATATATCGGTGGTCGGC
CTATCGGGGCCGTAGACCCAATCGACATTGCTCGTCTCTTATCCACAGAA
ATCTTACGAAAAACATTGTTACAGCGATACGGTGTTACCATAAAAACAGA
CATCATAGATATAAACTACAAACGTATTATAGACGCTGAGATCAACAAAG
ACTTAACTATAATAGACGATAAGAATCTTGAAACCGGGGAAGATGATGAA
AAAACAAATGAGAAGGATAATAGCTTTTCATCAGAAAGTTCATTAAAAGC
AAGGattatgattttgattttatttggcGTCCTCCTTGTCACAGTCTTCA
TCAGTATCGTATTGTTCAGAGCGAAGCCAAGGTGTTTACGCCACTTTCAT
ACATTACAACGTACGTCAAGTACACAAGACGTTATTCAAGACACGGCAAA
CAACGATTTAGATAACCAACCCTCTTCATCAACTAATCAAAATGGAGTCG
ATGGCTTCCTGGAACCACCGCCTTATTCAGAAGATGATAGATACAGAAAA
GATAATCCTCCGCCCAAATACGATGAACTTTTTATGGAGGAAAACCGACA
TACTACAACTGCAGAGCTATAATGGATTTATTCTGACTTTTATAATACTG
CAGTATCATTTGTGGTTCTTGCATTTTTGGGGCCTTATAGAAAGATAATA
CGTTTTTCATTGGAAAAAATGTGAGAACTTGATCGGACATAGAATGCATT
TCTAGTTGAATTTTTATCAAGCTGGGGAGTTCCCAGAAGATCAAAAATAT
TAGTTCCtcttggacccaacacccctattttggtacacaggtagtaaaaa
tcaaaatcgattttggacccaacaccccaattatagtacacaggcagtac
atgacaaatttttttctcaaacacccacccactCCAGGATACATGCCACC
TTCTGGTACACTGCC
Run BLAST on NCBI

protein sequence of TCONS_00001508-protein

>TCONS_00001508-protein ID=TCONS_00001508-protein|Name=TCONS_00001508-protein|organism=Clytia hemisphaerica|type=polypeptide|length=352bp
MSTQFSFTSFLQVLLLLKIQGPQTSDAYRTARCIEEVCSSTLKCDVAFSY
KPSLKGHRYCIGDDKYIQCRDCRLEEETISVSVHISGIQDHTKLQGYSRT
LLQFVNQWCPKIGCNVLYFKNVPKLSRFNFFTYPGVWDMATTTLIADNIH
TKLYFIKYIGGRPIGAVDPIDIARLLSTEILRKTLLQRYGVTIKTDIIDI
NYKRIIDAEINKDLTIIDDKNLETGEDDEKTNEKDNSFSSESSLKARIMI
LILFGVLLVTVFISIVLFRAKPRCLRHFHTLQRTSSTQDVIQDTANNDLD
NQPSSSTNQNGVDGFLEPPPYSEDDRYRKDNPPPKYDELFMEENRHTTTA
EL
Run BLAST on NCBI

transcript from alignment at sc0000010:923849..933491-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001508 ID=TCONS_00001508|Name=TCONS_00001508|organism=Clytia hemisphaerica|type=transcript|length=9643bp|location=Sequence derived from alignment at sc0000010:923849..933491- (Clytia hemisphaerica)
GGCCAGTATTCAATTAGCTAATAGACTGTATGGTATTATTGGCATTAAAT
TAATTAACGTAATGAGTCTTTTGTATTATGTAAGAGGAAATGGATTAAAA
CGAAACAGAATTACTTTATTATATTTGTTTTCACCAGCCAGAAGTCGAAA
GAAGAATCGCTGTCTGCGTTTAATACTGTATCACTTCACATTTTTTTGGA
TAACTGTTTCAACTGAGATATTATACTGAAATTTTGATGTTCAAATTTTA
ATTTTTTTTTGCATTGAGTGATATTGGGGTATTTACCGAAAACGGAATTT
TGTGCTGTCAAAGATGTCAACTCAATTTTCATTCACAAGTTTTCTTCAAG
TTCTTCTATTGTTAAAAATTCAAGGTAAGAAGCAAAAATTGGATCGAGTG
TCGTTAAAATGCTCCNCAAATTCAAGGTAAGAAAAAAAAATTGAATCGAG
TGTCGTTAAAATGCTCCTGACTCAATGTCGGTGTAAATGTTAGTAAGTAG
TATCTTTAAAACACAGCCAAACAAATTCTGTTATTATTTCACTGGTCAAA
CTTTCTTAAAAAAAACGCATCTTTCTTAAGTTGTTTTGATTTTTGTAAGT
GAGGACAGCGCTAATTTTGAATTCCCAACTGTAATTTTTTTAAGGCAGAG
ATTTCTAGGGTCGATTTAGCTCTTTTTCGGCCCGTTTTAAACCAATTGTA
GACAGGAGACCCGTCCTGTATTTTTATAAACTGATGTATACAGGGCGGGT
CTCCTGTCTACAATTGGTTTAAAACGGACCGAAAAAGAGCTAAATCGACC
CTACTTTTACAGATTGCGATGCCTTTTAAACCACTTTCCAAATATCTTAA
CCACTTCACTTTTTATAAAATGTTTCTTTTAAATTTATGAGAAGGATTGT
TTGAATTGGCACGTTTGAATATATCTTTCCAACTACAAAAACTTTTTTAG
TATTCAAGAGGCAAAGTTTAGATCATGCCGTATTTGCAGAAGCCAACAAA
ATGACCTTTTTAACGGTCGTAACCCTTCGAACAAAATATGTAGGAGATAA
ATTCAATCAAAAATAATTGTAATTTTCTAACTTTAATTATTTTCGAAAGC
ATGACTTTTGATTTCATTACAATCTTACTTGAAATTTCAAATTTCCAAAT
TTTGTCATATTTTTTACAGCATCATCAAATAGAGGAAAGTTAAGATTTAA
AGCAAGCTTAAAATCACCGAAAAGTACATCATAAAAAGTAATATTTTTCG
TTATGAAGGCAAATACTTTAGACAAATTAGAGTTTAGTTTTTAGAGTTGA
AAAGACGTTGGCAGCTTCCGTTCGAGCTAAAATTTCAATAAACTAACACA
ATTTGGCATCCTAATATTATAAGCATAATGGTACTACTCACTTCCTTATT
TCTGCCATAGTTATCTTGCAAATTTTCTACAATTAAGTTTAATGAAAACA
AAACTAATTTGCTAGAAAGTACACAATTTACTGGTTTAATTGACCACGCT
GAGCAATATCGTGTATTTTGGCAAGATGACTAAGTTTATGCGTAATTTCG
TGAACTTCGATTTTTTTTTGTTATAAGCGGCAAATGAACTAATCAATAGG
GTTATTTAGGTCTAAGATGCATAATTCTTGCTCACACCGTCAAAGGTAAT
GTATTCTTTGCTCACTAAGCGATTTTTTCGTCACTTTTGTCCAACGACTT
TTCCGCTAATAAGGTATATTAGGTCTAAAGTAGCCTGGAAATCCAATCTA
TTTAACGATTTCACCAAAAATCAAATCAGACGTTTCTCATTGAGAGTAGG
GTATTTATGACACGCTGAATTTTCTTGAATTGTTTTAAATTTCATGCAAA
GAATTTCGGTTGCTAAAGATGGCCAACTGTTAATGATGGCGAAATTTTGA
GCAGAGGGAGGGGGTGTTACAACGTGATTAGTGCTATATAAGTGACAAAT
TAAAGCTTGCACTTTTAGCTGTTTAGAAACCAAGATAATTACATTTTATT
GATCTCATAAAAATATAATTCGATGCAGATGAGTCGTGTGTTAAAGGTTC
ATTTGTTGATCAGGTTATTACAGCTCAATCGGGTGATTATTGATGCTTGA
AAAGCATATACAGTGTTCTATTCATAGAAATTTGCTTAAATAATGATAAA
AATAGAATTCGATTCCAGGCTTTTTTCGGACACACTGTAAAGACACGTTT
TCTTTGCCAAAATAAGAAAATTAGCGGAAAATTTTAGTATCTTAATATAA
AAAATTCAATGTTTATTACTGCAATCTATTCTACTAGCCTCAACCCCTTG
ATTGAAGTATACAACCTCGCTAAACTTGCTGACCCGTAAAACGGCCCTTG
GTATTGCTCCTTTGAATTTGATACGTCGCATTTAAAAATTAGACATCTAT
GAAGTAACTGATGTACTCTTTCACGTAGAGCCATTATAAATGTAGGCGCG
CGGAAATGTAGGTCTGTCGGCTTGAGCTCTTGACAATGTACATGTTTCGG
TGTTTGAAAACAAATGCTATTTGTTTCGGTGTTAGACAAGCCAAGTTTTT
AATTTTATGTTCATTTAATAAAAATGTTTCGTTATTTCAGTGTTGGTCTC
GCACACCCTAAGTAAAATACCGGATGAATATCTTTTTTGAAATTAAACTA
TCAGACTGTTTACCAATCCCCCTTTAATTTATAACGCTGATATTTATGTC
CTTTTGGAAACCTGACAAACCAGTGACAGGAACTATTTATCATTGTCTTT
TATCTCCTTTCTTTGAAAGGTGATGTAACAACGAAAACCTTTCGAATAAC
TCGAAAAAAAGGCTCGAAAATAAATCATATGTTAAATTCGAAATAAACAA
GCTACATGCTGAATGGACCTACCTGAAGAATGATGTAATATGACAATTGA
AAAATGAGAAGAATAGTATGAAAATGCAGAATAATAACGAGAACAACTCG
AGAAATTCATGGAATCCGGCGATTCTCGGCTGTTTTGGCGATTTTTAGAA
AGTTCCTGTACCAAAATCAGTTTCATTAAAAATTGAACCATGCTTAATCG
TGGACATTCTTATAAATCATGTTTTTGTTTGAAAAAAACAAAGACATGAA
ACGAAAAAATCCAATGAAAATCTGCAAAAACTGAAATTTCCGGCTTTTTT
GGCCGGAAAAAACATTTTCTCAAAAATCGAACTCGGTCATGTTTTGAGCA
TTGCGAATACGCATCATTCTGCAGAATGCATTCTGCATTCAGAGAAAAAT
AAGGATGAAAATTCGAGAAAATGTCAAAAAAGACCGGTTTTTCCGGCATA
TTTCTGGCATTTTCGGCCGGAAAAAAATGTTTTAAGGAAATTATAAGGAA
AAAGTCCAATGAAAATCCAGAAAAACGGCGATTTTCGGCATATTTTCTCA
AAAATTTTCTCAAAAATCGGACTCGGCCATGTTTTGGACATTGTTAATAC
GCATCTTTGTGCAAAAAATCAGAAAATACTAATGATAAAATCTCGAGAAA
ATGCCAAAAAAACAGTTTTTCCGAAATATTTCCGGCATTTTCGGCCGGAA
AAAAATGTTTTTCGAAAATCTAGCTCCGTCACATTTTAGGTATTGTCATT
TTGCATCAGTGTGCAAAATTTCATAAAAAAATATGAAGTACAGCTCGAGA
AATTCAAGAAATACTGTCTTTCCAGCAAAAATAGGTTGTTCCGGCAATTT
TTGAATAGTTTCGGCTTCAAAAATCTATTTTATTGAAAATTGAAACATGC
TTGATGGTGAGCATTGCTATTAATAATGTTTTTGAATGAAAAAACAACCA
ATTGTAAGGAAAAAGTCCAATGAAAATCCAGAAAAACGGCAATTTCCGGC
ATATTTCCGGCATTTTCGGCCGGAAAAGNNGTTAATACGCATCTTTGAGC
AAAAAATCAGAAAAAACTAATGATAAAATCTCGAGAAAGTGCCAAAAAAA
CAGTTTTTCCGGCATATTTCCAGCATTTTTGGCCGGATAAATATTTTTCC
CGAAAATCGGGCTCCGTCACATTTTGAGCATTACCATTTTGCATCATTGT
GCAAAAAATCAGAAAAAACTAACGAGCCAATCCCGAGAAAAGCTGGCAAC
AGACGAACGAACGGACGGACGAACGGACATGGGTTAATTTAAAGGACCTC
CACCGGGGTACCCGGAGGTAGTTCCAATAAAGCGAGCTCGAAATAAATAG
GAATTAGCGGCTTCCTTTGAGAATGAGCATTAAATATCAAAGCTTTTGTG
CACTGTGCAATAGTGGCTATCGAACATCATTTTCATCATTTTTTTAATTT
TCACTTGCAATCGCAAAGCCCTAATGAACAGTGCGATAGTTGGTGGAAAC
CACCCTTTAAAGAATAATGCCAATTATGATGCGAAACTCAGAAAAACTTC
AAAAAATTAATCGGAAGACAATTCGGACAAAAAGTAACTCTGGAATTCCA
GGCCTCTGTTAGTACCGTAGCCTCCAAAGGGTATGCCAAGAAATTCAGTG
GGTTAACGAAAATAATAATTTAATAACTTTATTTACTTACAGGTCCGCAA
ACTTCAGATGCGTACAGGACAGGTATGAAATGTTATATTTTCTACCCGCC
AGTAATGGGTGCCTGCATGGAAATATTGTTGGTAACGTTAATAACTTCTT
CCAAAATTTTTGGATTCTGCAATATTCTAAAAAATCAAAACAAAAAGCAA
CGTGGTTGGTCCATCTGATCCCATTAAGTTTGAAGCCCCCAAGGAGCTAG
CGAGGAATCTTCAACCTTTCTCAAGCAAGAAAAAGTGAAGCCTTAATTTT
GCCCCGCACTTAGAAGTTGTGTTTGAAAAACACGCGGGTCACATATCCTG
GATAGATCGTTCATATCTAGAGAGAAGAGATTGGACAGGAATGTAGAGGC
ATAAAACGTAGTCTTTTTTGCATTCAATCCAAAAATTATTTTATTTTCTA
TCTCAGCTCGATGTATAGAGGAAGTTTGTTCGAGCACGCTAAAATGCGAT
GTTGCATTTTCATACAAGCCAAGTTTGAAGGGTCACAGATATTGCATTGG
CGATGATAAATATATACAATGCCGTGATTGTCGCCTGGAAGAAGGTACGT
TGCTCAATCATGTACACGTACACGTTTTTAATTAAAAAAAATTCGTTAAG
AACATATAACGCTTAATAGCCAAAATATTAAGAACAAATTAAGAACATTT
TAAAGCTTTACGGACTTTAAAAGATTGTAGAAAAATACTCACAAAATGGT
GAAAATAAGAACATTTTAAGAATATTTTTAGGGTTAATCCTTAAAAAGTT
AAGAAAATCTGAAGGTTACTAAAATTTGGAGTATTCTTATAGAAAAACCT
GTATTTGTTATATTTTTCTCACCACTCTTTAACTCATATGTTTACCTCTT
ATTTCTTAGAAACTATATCAGTGAGTGTGCACATTAGTGGTATACAAGAT
CACACCAAATTACAGGTTGGTAATACCCTTCAAATAGATTTCCATCTTAA
AATTCTTATCCGTACCAATGGATGAATGTTAAATGTTAAAATTTTCTTAG
TGGATTTATCTTTTATCACTGGCGAGACATTGGTCACTCTTTGGCTCAAA
TTGCTATAATCACTGAATTTCAAAAAATTCTATCTGACAAGATTCTTAAC
ACTTCTCAAAAAGATTTTATATCTGGCAGCATTCAAATTTCGCCCTGTTA
ATAGTCTAGCAAGCTAGACGACTAATTTATACATAGTAGAAATAAAGCAA
AAAGTAATGAATGGAACAATTTTAGTCGTCTAGAAACCTTTGTGCACTAA
CTCCAAACAAAAGAAAAGTGTCGATATTGCAATTATAATTTTTTCCTGCT
CAAAATAATTCTTGAGAAAAAAGAATATGTGTGGATTTGTGTATTGAAAG
TTTTTCATTTGAGTTGATTTCGTTTTGAGAGTTTGTTGTTGCTTGATAAA
TTGTTTTCTCGCTACGCAAGTTTCTGCGTAGCTAGCCCCTGTCTCTATAA
GGCTGGAACACCGGATTCTTCCAGTCGTTTATACAAACTAAATCCCGTAT
TATTATTATTATTAGTATTGGTATTATTAGTATTACACGCATTATAAACG
ACTCCAGTCTACCCTGTTAAGGACGATCTTTCATAGTCAGAATTTCATCT
GTCCCGGAAAATTCTTCTTAAAAATTGATACGCCCCTGTCCGACTATCAG
TTCCTCTGAAGGAAATTAAAGCTTAGCCCAAAACAATAGACGATATCGGC
TTAACGTGAAATCACAGATTTGACCTCCGAAAATTGCCCACAATGATTTG
CGCAGAAAAAAGTTCACGGTGAAATTTTTTCCGCACAAAGCATTGTGGGA
AATTTCGGGCGTCAAATAGGAGTTTTCATGTAAAGCCGATATCGTCTATT
AACCTATACATTCGCAAATGACAGTTACTTGATTACTTAATCTTCATCTA
GGGATATTCCAGGACGCTCTTGCAATTTGTTAATCAGTGGTGTCCGAAAA
TTGGATGCAATGTTTTATATTTCAAAAATGTTCCAAAACTTTCTAGGTAT
GTATATTTCTTTCAACACAAAAACTTTAATAAGAAATAACAATATGTAAA
GGTTTTAGTTTTTAAAAATGTAAGTGAAGTACCGTGAAAAGCACAGGTCG
AAATCATATATCGACGCTGTGCCGACCAATCCAGATTCTATTTTTTGTCT
CCTGTATTTCCATATGACTCAAATTGAAAAATATTTTTCTATAAAGCCTG
AGATTTAGAGCTTTTTTCTCATTTTAGCAGATATCATTCTTGCTTGCTTT
ATTCCTGACCCATCAAGATTTCAAAATTTCTTAATAAACTCACCTACTCA
ATGAAATAATTTTTCAATTTTCAGATTTAATTTCTTCACATACCCTGGTG
TATGGGACATGGCGACAACAACTCTAATAGCAGATAACATTCATACAAAA
CTTTATTTCATCAAATATATCGGTGGTCGGCCTATCGGGGCCGTAGACCC
AATCGACATTGCTCGTCTCTTATCCACAGAAATCTTACGAAAAACATTGT
TACAGCGATACGGTGTTACCATAAAAACAGACATCATAGATATAAACTAC
AAACGTATTATAGACGCTGAGATCAACAAAGACTTAACTATAATAGACGA
TAAGAATCTTGAAACCGGGGAAGATGATGAAAAAACAAATGAGAAGGATA
ATAGCTTTTCATCAGAAAGTTCATTAAAAGCAAGGATTATGATTTTGATT
TTATTTGGCGTCCTCCTTGTCACAGTCTTCATCAGTATCGTATTGTTCAG
AGCGAAGCCAAGGTATGAAGTTTATCAGAAGAATTTTTTTGCTTTATGCC
AAATCCGCGAAACACGAATATTCTTAAGATTTAAAAAATCACCACTAAAA
TTGGTAAAATAGAGTATAAATGAGGTCATATTGAAAACAAAAATTCTCTC
AACAGCGACATTAAATTCCACGAAACTCCCGAATTTTCAGCTGTGAATTA
AATTCCGGGAAAATTTCTTTCCTTAAAGGTAAATCAGCATTCTTTAATAA
GCGAATACTATCGCATCGAGAAGACCCGTTGCCTGGAAACAGACCTGATA
TCTACGGAAATGTCCAAATTCATTGCTGTAGATTGAAACTCCGGTAGAGA
GCAGAAGTGAAATTGTGTCAATTTTTTGTCTTTAGGCGAGGCCAATTTGA
TTTATTGTTTTATGGGCCATGCTACTCAATAAAAGGTCGGTCGGCCGGTG
AAAAAATAAAAATAAAAGTAGAATTTCACCTATAAAATCTCCTTAAAAGG
TAGACAAAAATGCAAAAGAATCACATAAAAAGCTGGAATTGATGGATAAA
ATGAAAAATAAGACCTTGGAAAAACTACCAAAATTTTGTAAATTTGGGAG
TCTGTAAAGCAATGAAAATAAATTTTATTTTTATTTCGATTTTTGGAATT
TAAGGGTCGGTCGTGCTTGTAAAACAACTAATCAAATTGGTTTCGCCTTA
CACTCGGACGATATCTTACACCTGGGATGTACAAAAAGTCTTCCAAAACA
ACGTAATTTTTGGCAATATTGGTCAGATTAATTACAATTGTAACTTTTTC
GGTCTTTCTTCAGACAACAGGAAAAGTGTCTTTAGTGTAAAGAGAAATAC
CGATGGCAGACTATTAAATAAATTGCCGAAATTATTTGTCTGTCTATCAA
ACGTAATCATCTTTTGGCTTTCTTCTGTAGATCGTAAGATCGATACATGT
TACCTCACGGATTTTGGATTTAACACAGGTTAAATCGCGGTTTAACTTTT
ATTTGATAAGCGTCACATACAGTATTCGAATGGCTGGGTGGCCGCCCTCC
GCCAACTGAGTCTACTTTGCTAATAGTTACGTGACGTCATGTTCATAATG
GCCATCGCATCTCCCTGTTCAAGTCGACGCTCTAACTGAAAGCTGACAGG
ATGAAATATTTTTACCTCGCTCCCTCCCTGCAGTTATGGTTTTAGGCGAT
CCTCACTTATTTATACTAATATTGTATTTATCGGGAAAAATTTTCCCCAA
AACTTAATATTCGAGGATTAGCCATAAATTTATGCCAAACTCATATCTAC
CGACTCACACTTACTTCTCAGCCGTCCGAATACTTGATTGGTTTCTACCC
CTAATCTAGGCCATAGGCAAATGGAAAGTTAAATTACACGTTAAGAACAT
CCGTAAGCTTCAAAATCTTTGGACATTCGTACAAAAAAAGTGTAGTAGAA
TGACCAACATGTCTTTGTCGGCAAAGTAAAAGAGTCAGAGGTCTAAAAGT
CTAAATAGATAATTCTTATAAGGAAAATACTACAGGAAAATACTCGACTC
ACCATAATACTAGTTCTTTCATGGTATTTCCCATCGATGGTATTTCCACA
TCACAACTTGGTCCCTATCCAAAATACATGAATGGTAAAGAAAGGGTATA
GACCATACTTCTTGCCGAGCCACGTCCTTAAAAATCATGGGGTGAGAGTT
TCTTTTAAATCCCCCATGAAAAAGATGAAATTAGTTAATTTTCATTTAAT
TACCTACAGGTGTTTACGCCACTTTCATACATTACAACGTACGTCAAGTA
CACAAGACGTTATTCAAGACACGGCAAACAACGATTTAGATAACCAACCC
TCTTCATCAACTAATCAAAATGGAGTCGATGGCTTCCTGGAACCACCGCC
TTATTCAGAAGATGATAGATACAGAAAAGATAATCCTCCGCCCAAATACG
ATGAACTTTTTATGGAGGAAAACCGACATACTACAACTGCAGAGCTATAA
TGGATTTATTCTGACTTTTATAATACTGCAGTATCATTTGTGGTTCTTGC
ATTTTTGGGGCCTTATAGAAAGATAATACGTTTTTCATTGGAAAAAATGT
GAGAACTTGATCGGACATAGAATGCATTTCTAGTTGAATTTTTATCAAGC
TGGGGAGTTCCCAGAAGATCAAAAATATTAGTTCCTCTTGGACCCAACAC
CCCTATTTTGGTACACAGGTAGTAAAAATCAAAATCGATTTTGGACCCAA
CACCCCAATTATAGTACACAGGCAGTACATGACAAATTTTTTTCTCAAAC
ACCCACCCACTCCAGGATACATGCCACCTTCTGGTACACTGCC

Coding sequence (CDS) from alignment at sc0000010:923849..933491-

>TCONS_00001508 ID=TCONS_00001508|Name=TCONS_00001508|organism=Clytia hemisphaerica|type=CDS|length=1059bp|location=Sequence derived from alignment at sc0000010:923849..933491- (Clytia hemisphaerica)
ATGTCAACTCAATTTTCATTCACAAGTTTTCTTCAAGTTCTTCTATTGTT
AAAAATTCAAGGTCCGCAAACTTCAGATGCGTACAGGACAGCTCGATGTA
TAGAGGAAGTTTGTTCGAGCACGCTAAAATGCGATGTTGCATTTTCATAC
AAGCCAAGTTTGAAGGGTCACAGATATTGCATTGGCGATGATAAATATAT
ACAATGCCGTGATTGTCGCCTGGAAGAAGAAACTATATCAGTGAGTGTGC
ACATTAGTGGTATACAAGATCACACCAAATTACAGGGATATTCCAGGACG
CTCTTGCAATTTGTTAATCAGTGGTGTCCGAAAATTGGATGCAATGTTTT
ATATTTCAAAAATGTTCCAAAACTTTCTAGATTTAATTTCTTCACATACC
CTGGTGTATGGGACATGGCGACAACAACTCTAATAGCAGATAACATTCAT
ACAAAACTTTATTTCATCAAATATATCGGTGGTCGGCCTATCGGGGCCGT
AGACCCAATCGACATTGCTCGTCTCTTATCCACAGAAATCTTACGAAAAA
CATTGTTACAGCGATACGGTGTTACCATAAAAACAGACATCATAGATATA
AACTACAAACGTATTATAGACGCTGAGATCAACAAAGACTTAACTATAAT
AGACGATAAGAATCTTGAAACCGGGGAAGATGATGAAAAAACAAATGAGA
AGGATAATAGCTTTTCATCAGAAAGTTCATTAAAAGCAAGGATTATGATT
TTGATTTTATTTGGCGTCCTCCTTGTCACAGTCTTCATCAGTATCGTATT
GTTCAGAGCGAAGCCAAGGTGTTTACGCCACTTTCATACATTACAACGTA
CGTCAAGTACACAAGACGTTATTCAAGACACGGCAAACAACGATTTAGAT
AACCAACCCTCTTCATCAACTAATCAAAATGGAGTCGATGGCTTCCTGGA
ACCACCGCCTTATTCAGAAGATGATAGATACAGAAAAGATAATCCTCCGC
CCAAATACGATGAACTTTTTATGGAGGAAAACCGACATACTACAACTGCA
GAGCTATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000768XLOC_000768Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001508-proteinTCONS_00001508-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001508-exon-sc0000010-1575043694:933118..933491TCONS_00001508-exon-sc0000010-1575043694:933118..933491Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1575043694:928920..928949TCONS_00001508-exon-sc0000010-1575043694:928920..928949Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1575043694:928398..928535TCONS_00001508-exon-sc0000010-1575043694:928398..928535Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1575043694:928027..928082TCONS_00001508-exon-sc0000010-1575043694:928027..928082Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1575043694:926946..927040TCONS_00001508-exon-sc0000010-1575043694:926946..927040Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1575043694:926180..926617TCONS_00001508-exon-sc0000010-1575043694:926180..926617Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1575043694:923849..924432TCONS_00001508-exon-sc0000010-1575043694:923849..924432Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1510915933:933118..933491TCONS_00001508-exon-sc0000010-1510915933:933118..933491Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1510915933:928920..928949TCONS_00001508-exon-sc0000010-1510915933:928920..928949Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1510915933:928398..928535TCONS_00001508-exon-sc0000010-1510915933:928398..928535Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1510915933:928027..928082TCONS_00001508-exon-sc0000010-1510915933:928027..928082Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1510915933:926946..927040TCONS_00001508-exon-sc0000010-1510915933:926946..927040Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1510915933:926180..926617TCONS_00001508-exon-sc0000010-1510915933:926180..926617Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1510915933:923849..924432TCONS_00001508-exon-sc0000010-1510915933:923849..924432Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1491911889:933118..933491TCONS_00001508-exon-sc0000010-1491911889:933118..933491Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1491911889:928920..928949TCONS_00001508-exon-sc0000010-1491911889:928920..928949Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1491911889:928398..928535TCONS_00001508-exon-sc0000010-1491911889:928398..928535Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1491911889:928027..928082TCONS_00001508-exon-sc0000010-1491911889:928027..928082Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1491911889:926946..927040TCONS_00001508-exon-sc0000010-1491911889:926946..927040Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1491911889:926180..926617TCONS_00001508-exon-sc0000010-1491911889:926180..926617Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1491911889:923849..924432TCONS_00001508-exon-sc0000010-1491911889:923849..924432Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:923849..933491 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.306249	0.419819	0.955515	1.00815	1.30252	1.25741	3.66691	3.58616	1.55887	0.895962	0.620542	0.941354	4.41821	4.67081	8.54698	5.72778	1.16718	0.743172	3.93163	3.42858	0.364429	0.699913	0.108043	0.171896	1.24788	1.28667	0.364275	0.310263	0.339912	0.399596
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001508 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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