TCONS_00001678 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00001678
Unique Name	TCONS_00001678
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	4011

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000011:503879..515192-
coding sequence from alignment at sc0000011:503879..515192-

transcript sequence

>TCONS_00001678 ID=TCONS_00001678|Name=TCONS_00001678|organism=Clytia hemisphaerica|type=transcript|length=4011bp
ataaaagaaaaatgaaataaaaaagtgatATAATGTCAACGGAAGATTGA
TTTAACTTGTATTGGGCGTCTTCATAATGTGGCAGGATGACAGCGTACTA
TGGACAACGACACAGaACAAACGATAAAAGAAGTATGCACGagctaaata
aaaaattacggGCAGTCAGCCTGGCTGAAGAAGAGAGCAACAGACGTAAC
CAAGAACTACTTAAAACACTTGGCAAAGTTTCCAAACAAGCCACAACCCT
CAATAACAAAACTGAACGATTAAAGCAAGTTAGGGGTGACTATGAAGATT
ACATATCTCGTTTGTATCCTCAATGGGTTGGTTATATGGAGAAATTCAAT
CAACAATCTCCACCTAAAGAGGAGCGTGGTGTACGAATGAGAAATGAAAG
TCCTCCAAAAGAGACATCGCCTTCTAAACATCAAATGAGACCAAGTAGAT
CGCAGGAAAAAGATTTGTATCCCGAGTTTATCCAAGGAAAGATGAATCGA
TGGCGTCATGATACTTCCCTCGATAATTCACCCGAACGCCCTTTCACAAG
TCCTGACCGCCCTCATAGAAATGCTAGAACTAGCCCATCCTANTCTCGAT
AATTCTCCCGAACGCCCTTTCACAAGTCCTGACCGCCCTCATAGAAATGC
TAGAACTAGCCCATCCTATAATAGCCATCACATTGGCCAATCCTACATGA
CACCGCCCTCTCATATTGGAAGGACATATCCCGCCCATCCTGATGACTTT
TTACCGCCAAATGAATTCAATCACCGAATGTCTTCAACGTATAGACGAGA
GGAACCTTTTAGAACTAAATCAGAGCCGTTTCTACCAGTAGGTCGAGAAT
TCGAAAAGTCTTCTATACATCGTGAAGAATCAGGCAAAACTTTCACAAAC
CAGCCAAGCATACATGATTTGCTTTTAAACAATTCAGTCAACGCTCAAAA
TACTGATTTATCAGACATCACGATATTACCACAACTTTTGGGTGTCAGTC
AAAACGGACAATTAGTTTTAGTACCTTTGGCTGCCTCTGTCAATCTGAAC
TCCTCACTCAATAATACTTTCGACGGATTAAACGGTGCGAAACAACGAGC
TAGTCCTGTTGGTCAAAATAGTGAATCAGTGAATCAGACTTTTGACGATA
GCCAACAGACCGTGAAAACAAACGGATCTGTGACCCAGAACGTGTCTGTT
TTACAGCAGCGGCAAAATAACGATCATCCAAATTCTGGTTCGTTTAACGA
TCGCATAAAGGCGGAGCGTGAAAGCCAACGTTTGAATTATATCGAGTTAA
AGAGATTGGAGAAGGAGAAAGCGAAGAGACTGCAAGAAGAAGAGAAGGAC
TTGAAATTGCAAGAGGAGAAGCAAAGATGGCGCGATTTGGAGAATGAAAT
CGAGCGAAAGAAAGTAGAAGAAGAACGTCTGAAAGCTGAGAAACTGGctc
aagaaaagaaagaaaaggaacaaaaacagaGAGACAAAGAACAAGAAAAA
TTACTTAAACCACAAGAATCTCCTGCTCTCAAGAAACAAAAATCACCCAT
GTTCTCAAAACTGAAAAGTTTAGCTAAATTCTCACCGTCTACGAGACGAG
ATTCTAAACAAGAAGCTCCTGCCGTGGTAGTTGAAGAGATTGCGAAGGAG
CCATCCAAGGAGGAGATGCAAGAAAATGAACCACCCTCCTTCTTTGGTGA
TGATGAGGATCTTTTCCCTGATGACGATTCAGAAGATGAAAATGATCTGC
GCCTTCATTCGAAATCGATGTCTAGAGCTATCAGTGATATTGAAGAATTA
AGCGAGAACTCCAGTCGACAAACACCTAAAAAGAAATCACCAATACAATC
ACCGAGGTCTTCTTCAGAACCTCTTAAATCTTCATCCACACCTCAAAGCC
GGCAACAACAACCTCAGATTCAAGAACCAAGTCCTTTAGTATCACCACTA
AACAACAATCACAGTAGTAGTGCCAACGATTCATTGACCAATCATCCTCG
AAGCAACAAAGAATCACCACCGTCAGCAAATCATTCAAAAACCAATAAAG
ATTCTTCACTCTTCAGTGACTTCAGTGATCATTCTGAATTTGATTTACCA
TCAAATAAATCAGTATCTCCGCCTCAAACGAAATCTTCTCCACCTCTTAC
TTTATCTGTCGTTGCCAAGCAACCTGCTCGATCACCACCAGTACCTGCAT
TGCAGAAACAAAGAACATTCTCACAAGATTCTCATGGTGAGACGATGGAC
GATTACCAACCTTTGTTGTACATCATGGAAACGTTGACCGATAAAGTAAA
AGATGAAGAGAGCGAAGAGGTTCTTGTCCTCAACATCGATATCAATACTA
ACCAAGCGAACACCATTATCGGCACTGCTGAATTGGAAGGTAATGTGAAA
CAATTCGACTCCAGCGAACTTTGTATGTCGTATCGTTATCATTTACAACA
ACTAATGGTCAAGAAAAGTGATCGACCTTTCCTCATTCATGACGTTGATG
CTAATAATGATTTCGAAGGAAATTTAAGAGATTGTGTGGATTCTTGTTAC
CTGGAGATCTGGGACTCTTTATTTATCTTCTTGACAGAGATAATGTCCGC
CTTTGAATTCGACCCCGTGCAAGTGGCCACAATCTTCGCCAATGTTTTGT
TACCGTCACATGAAAAGCAACGAAAGCAGGTTCTATCTTCACTTGGCAAA
ATTTTGACTCACTTATCCGAAGAAAGTTTTGAAACTGAAAATGAAGACGG
GGAAAGCGAGGCTGGTCCCATAGCAACCAATAACGTTTCCATGCCAACCC
ATAGTAACATCAGTATCACGGAAGAAATCCACACTCGTGGTATTAGTAAA
ACGTCTAAGAGTGAACCTCTCTCGTCAACGTACGGTGGTGGTAAAAGCAC
TACGGAGAAGGGAGATTTATCACAATCGCTCtcctttgaaaatgaagatg
agaaCTCCTCCACGCTGTCTTTTGATTCAGATGGTCTTCCAGTGCGCcga
tcaaaacaaaccaataaGCAGCAAGATTCAATCTCTCAGAATAACAGTAC
GCTTTCAGAGGCTAGTTCCAACCTCAATTTGAATGGATCAAAGGCTTACC
AAGAGATGCGTCATGAAAGTTTGATGAGTCCGGTACATGAAAGTGTTGAT
GATGATGACGAACTTGAAGATCTTCTCGGTGAAAGTATCGGCCTCAATAA
ACGACCACAAAAAATGACTTCGTCGCCCCCGCCACCGGCAGCTCCGTACA
GCACGGAGAACAACAACTCTACTAACGATCAACTGTCAAAGAAATCTTCT
ATCAAAATGACACCATCCAGTGATCTTATCACACGCTCGGAATCATCTTT
GACTTCTcaaactaaaaacaaaaaccaaaagaaaatgGATGTCAAAAAAC
CTGATTTCTGGGACACAGAATCCGAATCGGATTTTGATTTGAGCAATGCT
GGGCGATCGGGAAATCAATCTtcacaacaacagcaacaaggGAAAAAgga
tgatgacgatgatgatgattttgatttcgaTTTCTATGATTGAGTATGAA
gaagagaatttcttttggtaatCGTATGGATTGGGTGATCATTGTTTGCT
TGCCTGATCTCATTATCTTGGTTGGCTAGATATTATTAGCTATTTCACAG
CTATGCAGATTGGTTGGGAATGGTTCCACAGTCAAAGTAAAAAGCTCCCA
TCAGTAGAAATCATAagatcaaaaaaaaatatatgaaaaatatttatatt
ccTAAAGGAGTTACATATTagattttaatatattttaactatttttaaaa
attggagTAATTTTTGTTgatacggatttttttcattgtatatttgtttg
tttatttttcaaaaattgttgttttatcTCAAGTTCATTTTTATCCATTA
TACCTGTATTgaattttaatatattttttgaacatttttacacaaaatat
ttaaaagtatGAACCTCGTAAAtattccaatgataaaatgcAAGTTTTAC
TGTAAAATTTA

Run BLAST on NCBI

protein sequence of TCONS_00001678-protein

>TCONS_00001678-protein ID=TCONS_00001678-protein|Name=TCONS_00001678-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1011bp
MILPSIIHPNALSQVLTALIEMLELAHPXLDNSPERPFTSPDRPHRNART
SPSYNSHHIGQSYMTPPSHIGRTYPAHPDDFLPPNEFNHRMSSTYRREEP
FRTKSEPFLPVGREFEKSSIHREESGKTFTNQPSIHDLLLNNSVNAQNTD
LSDITILPQLLGVSQNGQLVLVPLAASVNLNSSLNNTFDGLNGAKQRASP
VGQNSESVNQTFDDSQQTVKTNGSVTQNVSVLQQRQNNDHPNSGSFNDRI
KAERESQRLNYIELKRLEKEKAKRLQEEEKDLKLQEEKQRWRDLENEIER
KKVEEERLKAEKLAQEKKEKEQKQRDKEQEKLLKPQESPALKKQKSPMFS
KLKSLAKFSPSTRRDSKQEAPAVVVEEIAKEPSKEEMQENEPPSFFGDDE
DLFPDDDSEDENDLRLHSKSMSRAISDIEELSENSSRQTPKKKSPIQSPR
SSSEPLKSSSTPQSRQQQPQIQEPSPLVSPLNNNHSSSANDSLTNHPRSN
KESPPSANHSKTNKDSSLFSDFSDHSEFDLPSNKSVSPPQTKSSPPLTLS
VVAKQPARSPPVPALQKQRTFSQDSHGETMDDYQPLLYIMETLTDKVKDE
ESEEVLVLNIDINTNQANTIIGTAELEGNVKQFDSSELCMSYRYHLQQLM
VKKSDRPFLIHDVDANNDFEGNLRDCVDSCYLEIWDSLFIFLTEIMSAFE
FDPVQVATIFANVLLPSHEKQRKQVLSSLGKILTHLSEESFETENEDGES
EAGPIATNNVSMPTHSNISITEEIHTRGISKTSKSEPLSSTYGGGKSTTE
KGDLSQSLSFENEDENSSTLSFDSDGLPVRRSKQTNKQQDSISQNNSTLS
EASSNLNLNGSKAYQEMRHESLMSPVHESVDDDDELEDLLGESIGLNKRP
QKMTSSPPPPAAPYSTENNNSTNDQLSKKSSIKMTPSSDLITRSESSLTS
QTKNKNQKKMDVKKPDFWDTESESDFDLSNAGRSGNQSSQQQQQGKKDDD
DDDDFDFDFYD

Run BLAST on NCBI

transcript from alignment at sc0000011:503879..515192-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00001678 ID=TCONS_00001678|Name=TCONS_00001678|organism=Clytia hemisphaerica|type=transcript|length=11314bp|location=Sequence derived from alignment at sc0000011:503879..515192- (Clytia hemisphaerica)
ATAAAAGAAAAATGAAATAAAAAAGTGATATAATGTCAACGGAAGATTGA
TTTAACTTGTATTGGGCGTCTTCATAATGTGGCAGGATGACAGCGTACTA
TGGACAACGACACAGGTATAAAATAAACGTTATTTTCGCTTATCAATTTT
CAAAATCAATAATTTATAAATTCTTCAATATTATTCAACGTTTTCTATCA
GAGAAAGTAGCAAGGTTTTTTAACCACAATATTTTCTATTTTTGCTGAAA
TGTATGTAAATTTGATCACGTTTTTATGGTAACTACTATTTCAGAGCTTC
CTCTTTTAGTGTTTGATTCAGCCTATAAGCAGTTTTTACTTTCTGCATGG
TTTCGTCAGAATTGGTGAAATGAAATCTAGCTCTTTCACTTTATAATATT
ATTTTATAATTATTCGACAACGAAACAAAGTAACAATTTTTTTCAGTTTC
GTCGTCAATTTTTCATTTTCGTTGTCAAATTTTAGTTTCGTCGTTAAAAA
ATTAAAGGAGAATCTAAATGGCACTAATGGGCTTCTTTATTTTATATACC
TGATTTTTCTTCTCTTTCAGAACAAACGATAAAAGAAGTATGCACGAGCT
AAATAAAAAATTACGGGCAGTCAGCCTGGCTGAAGAAGAGAGCAACAGAC
GTAACCAAGAACTACTTAAAACACTTGGCAAAGTTTCCAAACAAGCCACA
ACCCTCAATAACAAAACTGAACGATTAAAGCAAGTTAGGGTAAGAGTTTC
AGGCCCGGCTGAAGCGGGAAGACTGGGAAGACTTCAGTCTCCCCACTTTT
GAGCAAATGAGATTTTTTCCTAGTGAATTTTATCTCATTTAGAGACTTCA
GCCTCCCTTTTTTTGAGCAAATGAGATTTTTTTTCACAAATTCCTAGCAA
TTGTTATCTCATTTGGAGCCTTCAGCCTCCCCATTTTAACGATTGTTCCG
CCGGGCTTGAGTTTTGCCTTTTCAGTTAAATGTTGCTTCGGATTCTGTAG
CATTGGGCTTTTCCAGAAAAAAAATTTACCTTCACTGTCGATATTGATTT
TTCGAAGTATCGAATCCCCTGGATATCCTACTTTATTAGTAAAGACTCAC
TGGATATCCGCTCCCTTGTAGATATTTAACCCCCTGGATATCCACTTTTG
AACAAAAGTCGTTAACCCCCTGGATATCCGATATCCTCAACAGGGGGGGG
ACACGGGCTATTTCTGGAAAAGCCCATTGGCTCTTTTAACTTTTTGTTGA
TTGCTCAAAGATGTAATATGATAATGTCTGAAATGTCGCAAGAAACTTTT
TCTGGAGATATGCCGGAAAACTGTCTTACCAAAATACATGTTTTTTTATA
AGAACATTACATGTTTTTTATAAGAACATCAAAAAATTGTTGTGATAAAT
GGATGAGGGGAAATGATGATTTAAGAGACGATACTAAACATCATGAATAA
AACCATTATTACGCTATCTTTTGAAGTCTTAAAAAATTCCATTTACCCAT
AAAAAGCGCCCTATTTGCAACCAAGTTAGTAACTGTATATTACCATGAAG
TCAGTTTGTTGGTATCTTGTGTTTCTTTTCTACAGGGTGACTATGAAGAT
TACATATCTCGTTTGTATCCTCAATGGGTTGGTTATATGGAGAAATTCAA
TCAACAATCTCCACCTAAAGAGGTAAGCTTTTCTCATTCGGTAATAAATC
TTCTTCTATTCTGAACGAGTGGAGCCGAAGTGGCCTGAGGCGTCAGCGCC
ACAATACAGGGCCGGGCTCCCGATTCGAATCTTGTCAATGTCCCACTTAG
TTCGTAGAAAGCCTACTCGCTTGGCCATAGACCCTATGAAACCAAACGAA
AACTGTCCAACTTGCCTATTCACGGCCAAAATAGAGTCATCTGATTACTT
TCTTGACGGTTCCTATATGACTTCCCGTTGTTTTGGTCAGAAAATTTCCG
AAATTTCGGACCAACAGAAAGTCATTATCAGAGCGCTAGACCATGTTCAG
ACGTCACGGTTTCGTATTGTTCCGAAACGAAACGATTCTAAAACAAGTGT
GAACGTCAAAAATTAAAAACGTCAAAAAAGAAGACGTTACAAAGCAAAAA
AGATCGAAACGGTTTCGCTCCACTTTTTTCATCGGAACGAAACTGCTCCG
TTTTTTGCTCCGAAACGCTCCGAAACCAATATAAACACTCTCGATCCGTA
ACGGAAACCATTCTTTAGCGAAACGAAACCGTAACGTCTGAACATGGTCT
TAGTGGTGATTAAAATGATCATAACGGTTTTCGAGTTGGGACACGGCTAA
TCACTTAACTTAGTTAATTCAGTTCAAACTAGTTTATTTTTTACCTTATT
TACCTTTTTTTTCTTTTCTTTCTCTTAACAGGAGCGTGGTGTACGAATGA
GAAATGAAAGTCCTCCAAAAGAGACATCGCCTTCTAAACATCAAATGAGA
CCAAGTAGATCGCAGGAAAAAGTAAGCCAAGTCATGCATATATCAGGGTT
TACAAGAGTCTTCATACGTCCCTTTAATTGACAAATGTTTTAAAAATTTA
AAATGAAATTCTTTGCTTACAAATTTTCGTTCAACTTTCTTAATCCCATT
AAATTTTCGCGTCTTTTGCTTTCGCGCGCCACTTAAATTAGGGTAGTCGT
GCGCCCTTTAATTTTCGTGCATCTTATAATTTCTACGTCTAACTTTTTCA
GGATTTGTATCCCGAGTTTATCCAAGGAAAGATGAATCGATGGCGTCATG
ATACTTCCCTCGATAATTCACCCGAACGCCCTTTCACAAGTCCTGACCGC
CCTCATAGAAATGCTAGAACTAGCCCATCCTANTCTCGATAATTCTCCCG
AACGCCCTTTCACAAGTCCTGACCGCCCTCATAGAAATGCTAGAACTAGC
CCATCCTATAATAGCCATCACATTGGCCAATCCTACATGACACCGCCCTC
TCATATTGGAAGGACATATCCCGCCCATCCTGATGACTTTTTACCGCCAA
ATGAATTCAATCACCGAATGTCTTCAACGTATAGACGAGAGGAACCTTTT
AGAACTAAATCAGAGCCGTTTCTACCAGTAGGTCGAGAATTCGAAAAGTC
TTCTATACATCGTGAAGAATCAGGCAAAACTTTCACAAACCAGCCAAGCA
TACATGATTTGCTTTTAAACAATTCAGTCAACGCTCAAAATACTGATTTA
TCAGACATCACGATATTACCACAACTTTTGGGTGTCAGTCAAAACGGACA
ATTAGTTTTAGTACCTTTGGCTGCCTCTGTCAATCTGAACTCCTCACTCA
ATAATACTTTCGACGGATTAAACGGTGCGAAACAACGAGCTAGTCCTGTT
GGTCAAAATAGTGAATCAGTGAATCAGACTTTTGACGATAGCCAACAGAC
CGTGAAAACAAACGGATCTGTGACCCAGAACGTGTCTGTTTTACAGCAGC
GGCAAAATAACGATCATCCAAATTCTGGTTCGTTTAACGATCGCATAAAG
GCGGAGCGTGAAAGCCAACGTTTGAATTATATCGAGTTAAAGAGATTGGA
GAAGGAGAAAGCGAAGAGACTGCAAGAAGAAGAGAAGGACTTGAAATTGC
AAGAGGAGAAGCAAAGATGGCGCGATTTGGAGAATGAAATCGAGCGAAAG
AAAGTAGAAGAAGAACGTCTGAAAGCTGAGAAACTGGCTCAAGAAAAGAA
AGAAAAGGAACAAAAACAGAGAGACAAAGAACAAGAAAAATTACTTAAAC
CACAAGAATCTCCTGCTCTCAAGAAACAAAAATCACCCATGTTCTCAAAA
CTGAAAAGTTTAGCTAAATTCTCACCGTCTACGAGACGAGATTCTAAACA
AGAAGCTCCTGCCGTGGTAGTTGAAGAGATTGCGAAGGAGCCATCCAAGG
AGGAGATGCAAGAAAATGAACCACCCTCCTTCTTTGGTGATGATGAGGAT
CTTTTCCCTGATGACGATTCAGAAGATGAAAATGATCTGCGCCTTCATTC
GAAATCGATGTCTAGAGCTATCAGTGATATTGAAGAATTAAGCGAGAACT
CCAGTCGACAAACACCTAAAAAGAAATCACCAATACAATCACCGAGGTCT
TCTTCAGAACCTCTTAAATCTTCATCCACACCTCAAAGCCGGCAACAACA
ACCTCAGATTCAAGAACCAAGTCCTTTAGTATCACCACTAAACAACAATC
ACAGTAGTAGTGCCAACGATTCATTGACCAATCATCCTCGAAGCAACAAA
GAATCACCACCGTCAGCAAATCATTCAAAAACCAATAAAGATTCTTCACT
CTTCAGTGACTTCAGTGATCATTCTGAATTTGATTTACCATCAAATAAAT
CAGTATCTCCGCCTCAAACGAAATCTTCTCCACCTCTTACTTTATCTGTC
GTTGCCAAGCAACCTGCTCGATCACCACCAGTACCTGCATTGCAGAAACA
AAGAACATTCTCACAAGATTCTCATGGTATGATATTTTTCTTTCGTTGTT
GTTTATAAAAAAGATTCTATACAATTCATTCATGCCAGTTGATTTTCACA
CCTAAAAATCTATAACTTAACCATTAGATGCCAAGAATGATCATCTTTTT
GGGCACTTCCGAGTTGTACGCTTTTTATGACAACATGTAAATTTCGCTGA
GACACTGAGACTGGCGGTTCTAGATTTTCATTAAGTTTTGAGAAAATTAA
AGGCTTTGATTGTTCTTTTTATAAGGTTTTGGCTCGTGTTATAAAATCGC
TCTTATATAAAACTTGTTCGAGTTAAGGTTAAATTCGAGTTAAAGAGGTT
TGAGTTAAAGAGAAATTCGAGCTATAGAAGTTCGAGTTGAAGAGACTCTA
ATGTACAACCTTCTATATGCAGGTGAGACGATGGACGATTACCAACCTTT
GTTGTACATCATGGAAACGTTGACCGATAAAGTAAAAGATGAAGAGAGCG
AAGAGGTTCTTGTCCTCAACATCGATATCAATACTAACCAAGCGAACACC
ATTATCGGGTAAGAAGTAATGGCTTGCTAGGGTGGCTTAAATTCCCATTG
ACTGAGTAAATCTGCGACTGCAATCGGAGGCGACCTGAAGGCTCTTCTTT
AGATAGCTACCTATACGAAGGTAGGGGGCGCCACTCTTTCTCCCTGGATT
ATTTTCTTACCCTTGATCTTCCCTTGATCTTCCTTTCAATAGCTGAGTAT
CAAGCAGAGAGACATCAAGTACTATTTTTGAGAGTTTAGTATCTTTGGTA
CGGCTAGGGATTGGACCCATGTCCTTGTGCAACGTAGCCGAATGCTCAAT
CTTTGCACTACGGTCACTAATTAAAGATAAGATGTCACGTGCATGAATTT
CTCCAACCAAACCCATCGTAAAACTCAGTTTTCCTGGTTGACGGTAAAGT
AAGGCCTTTTGTTTAGACTACAAAAAGAAATCTGATTGTGATCGATCAGC
CTTGATTATTCAAAGTTGTTTTTAGTGAAGTAAATGGATATTCAACCATC
TGTTTCTTATGTATTCATGATATGCACCATTGCATGCAATGTCTTCCACG
GACCCAAAAGCTGATCGGTTGAAAGTGACGTATTGACTGATTTAACCTCA
TTTACATCAGCTATTGGGTCCGTGATATAATGTCGGAAGAGATTGCAATG
GTGCATATTATAATTGCTGTGTAATATTTTTTATGCTTATTATTTTAGCA
CTGCTGAATTGGAAGGTAATGTGAAACAATTCGACTCCAGCGAACTTTGT
ATGTCGTATCGTTATCATTTACAACAACTAATGGTCAAGAAAAGTGATCG
ACCTTTCCTCATTCATGACGTTGATGCTAATAATGATTTCGAAGGAAATT
TAAGGTTTGTTTCTTAGTAATGTTCGCCCTCTTTTTGGACCTACCGGGAG
GTCCTTTAATTTGACCGTTGTCCGTTCGTCTGTTACAAGCTTTTCTCGGG
ATTGGCTCATTAGTTTTTTTTAATTTTTTGCACAATGATACAAAATGGCA
ATGCCTGAAAAAGTAATATTGATTATTTTTGAAAAAAATTTCTGGGGGGC
AAATTTGGGCCAAAAACTACCCAAAAATAAGGTTTTTGGACTTGTTGCAA
AATTGCTTCATTAGTTTTTCCTGATTTTTGCCAGAAAATGGAGTGCAAGG
CACCCTAAAATGGGGCTGAAGTAATTTTTCTCGGAAAATTTTTTTTCGTC
GTCAAATACGGATTTTCGCTTTTTTGGGGAAATTCCCTTTTACCATTTTC
CTGTTAGTAGCTTTTCTCCGGATGGGCTCATTAGTTTTTTTTAATTTTTT
GCACAATGATACAAAATGGCAATGCCTGAAAAAGTAATATTGATTATTTT
TGAAAAAAATTTCTGGGGGGCAAATTTGGGCCAAAAACTACCCAAAAATA
AGGTTTTTGGACTTGTTGCAAAATTGCTTCATTAGTTTTTCCTGATTTTT
GCCAGAAAATGGAGTGCAAGGCACCCTAAAATGGGGCTGAAGTAATTTTT
CTCGGAAAATTTTTTTTCGTCGTCAAATACGGATTTTCGCTTTTTTGGGG
AAATTCCCTTTTACCATTTTCCTGTTAGTAGCTTTTCTCCGGATGGGCTC
ATTAGTTTTTTTTAATTTTTTGCACAATGATACAAAATGGCAATGCCTGA
AAAAGTAATATTGATTATTTTTGAAAAAAATTTCTGGGGGGCAAATTTGG
GCCAAAAACTACCCAAAAATAAGGTTTTTGGACTTGTTGCAAAATTGCTT
CATTAGTTTTTCCTGATTTTTGCCAGAAAATGGAGTGCAAGGCACCCTAA
AATGGGGCTGAAGTAATTTTTCTCGGAAAATTTTTTTTCGTCGTCAAATA
CGGATTTTCGCTTTTTTGGGGAAATTCCCTTTTACCATTTTCCTGTTAGT
AGCTTTTCTCCGGATGGGCTCATTAGTTTTTTTTAATTTTTTGCACAATG
ATACAAAATGGCAATGCCTGAAAAAGTAATATTGATTATTTTTGAAAAAA
ATTTCTGGGGGGCAAATTTGGGCCAAAAACTACCCAAAAATAAGGTTTTT
GGACTTGTTGCAAAATTGCTTCATTAGTTTTTCCTGATTTTTGCCAGAAA
ATGGAGTGCAAGGCACCCTAAAATGTGGCTGAAGTAAATTTTCTCGGAAA
ATTTTTTTTCGTCGTCAAATACGGATTTTCGCAAATTTGGGCCAAAAACT
ACCTAAAAATAAGGTTTTTGGACTTGTTGCAAAATTGCTTCATTAGTTTT
TCCTGATTTTTGGCAGAAAATGGAGTGCAAGGCACCCTAAAATGTGGCTG
AAGTAATTTCTCTCGGAAAATTTTTTTTCGTCGTAAAGTACGAATTTTCT
TTTTTGGGGGAAATTCTGTTTTACCATTTTCCTGTTAGCAGCTTTTCTCG
GGATCGGCTCATTATTTTTTTTTCATTTTTTGCACAATGANTGGCAGCTT
TTCTCGGGATCAGCTCATTATTTTTTTTTATTTTTTGCACAATGATACAA
AATAGCAATGCCTAAAAAGTGACGGAGCCCGATTTTGAAAAAAAAATTTG
GGATAATTTTGGGCCAAAAACTACCTAAAAATAAGGTTTTTTGGACTTGG
TGCAAAATTGCTTCATTAGTTTTTCCTGATTTCTGTCAGAAAGATAGAGT
GCAAGGTACCTTAAAATGTGGCTGAAGTAATTTTCTCGGAAAATGTTTTT
TCGTCATAAAATTTTCAAAAAAAGACGACCAAGTTACGCAATGATAAAAG
AAAATAAATCAGACGTTTTTGCATTGTTCTAAAACTTATTGTGTTTGCTC
AATACCAATAGTAAAATGTAGAACACCTACTTTTATCTGATTTTGATCAA
CAGGTAGGTCCATTCAGCATGTTGCTTGTTTTAGTAGCTATACCAAATAG
TGCGATTGAGTGGGTATAGCAAATAATAGCGTATTCCTTATCGGGGGAAA
AAATGTCGGGGGAAAGTGACGAAAATGCCTCTAGGTGACGAAATTTTTCC
CCGACGAAAAAAAACCCCGACATTTTTTTCGCCAATAAGGTATCAAACCT
GTTATTTATCTTGCTCTCTCATATTCTCAATTATATTTTTAAAATCCAAG
TAGTTTTTTTGTTATTTGGAATTTTTGTGTTTTTCTTTCAAAATGGTAAC
CTCGTCAAACGCTCCTAGTCTACTTCACTGGACACAGGGTCATCAAAATT
ATCAAAAAGCAAAGTTCAGCCAGGATTAGACTTTAGTCTAGTCGTCATGA
TGTTTTCGTTTCGTTTCACTCACTATGTGTTTTATCATGAATATTCACAA
TGTCGCTGATATTCATGACAAATGATTTACTATTAGCTAATTATGAGTAA
ATAGTAGAATTTTTTTGTATCTAAAAAACCTTTTTCCTATCTTCAAACCT
AGTTTAATTTCACTTTCTTATACATTTTACTCCAATGAAATAAACGTTAC
AAACAGTACTTTTTTTCATTTCCAGAGATTGTGTGGATTCTTGTTACCTG
GAGATCTGGGACTCTTTATTTATCTTCTTGACAGAGATAATGTCCGCCTT
TGAATTCGACCCCGTGCAAGTGGCCACAATCTTCGCCAATGTTTTGTTAC
CGTCACATGAAAAGCAACGAAAGCAGGTACAAACTGATTTATTCCATACT
TTACAAGTCACTGTCAATTTTTTTTTGATTTTTCTGCAGCTTGTTTCTTT
GTCAAGGTTATTTTGCCCACCATATTTCAGTTTTAATGTGATTTCACTCC
TAATCCATCTGCTGATTTATTTTGAAAATTATCCACCGGTATATTTTGTA
CCCAGGAGTAGTTACCAAATTTTGAAAGTTGTATCAACAGTAGATGGGAT
CACGCAATTAATTCACTTTTTGTCAATTTATTTTAGGTTCTATCTTCACT
TGGCAAAATTTTGACTCACTTATCCGAAGAAAGTTTTGAAACTGAAAATG
AAGACGGGGAAAGCGAGGCTGGTCCCATAGCAACCAATAACGTTTCCATG
CCAACCCATAGTAACATCAGTATCACGGAAGAAATCCACACTCGTGGTAT
TAGTAAAACGTCTAAGAGTGAACCTCTCTCGTCAACGTACGGTGGTGGTA
AAAGCACTACGGAGAAGGGAGATTTATCACAATCGCTCTCCTTTGAAAAT
GAAGATGAGAACTCCTCCACGCTGTCTTTTGATTCAGATGGTCTTCCAGT
GCGCCGATCAAAACAAACCAATAAGCAGCAAGATTCAATCTCTCAGAATA
ACAGTACGCTTTCAGAGGCTAGTTCCAACCTCAATTTGAATGGATCAAAG
GCTTACCAAGAGATGCGTCATGAAAGTTTGATGAGTCCGGTACATGAAAG
TGTTGATGATGATGACGAACTTGAAGATCTTCTCGGTGAAAGTATCGGCC
TCAATAAACGACCACAAAAAATGTAAGTAACATTTTTTCAGGGGCTTTTC
TGTTATCAGCAAAAATCACAAAATCCTCGTGGGGAAAGGCTTAACGTACT
AAGTCGGTAATTTCTTGTCACTCCGAAACGATGGCATTGAAATTTCGACG
CCCACGGGGGAGACATATTCATTTTCACTTCTAAAGATTTCTATTAATAA
TTAGTCCTACTAAGAAGAAACAGTTCTCTTGGCACAGTCGAATCTCTAGA
AGTCGAGTTCGTAACTAGAACACGAATTTCTTCGAGTTAAGGAAATCTCG
AGTCAAGCAGACTGGTTTGTTAACTCGAAAAAATTGTTTTAGAAAATTTA
CTAAATGTAGTTGTGTAGTAAAAATTCGTTAAGTTTGTCATATCTCAAAA
CCAACAGGACTTCGTCGCCCCCGCCACCGGCAGCTCCGTACAGCACGGAG
AACAACAACTCTACTAACGATCAACTGTCAAAGAAATCTTCTATCAAAAT
GACACCATCCAGTGATCTTATCACACGCTCGGAATCATCTTTGACTTCTC
AAACTAAAAACAAAAACCAAAAGAAAATGGATGTCAAAAAACCTGGTATG
TCGTCAGCAAGTTTCATTTTGCCCTGATTTGTTGATTGTTATTTATGTCC
GAGTCGAGTACGAGCTTAATTTCATAAACTTTAATTTATTTCTATAAGCA
ATAAGTAAGTAATTTTCTGACCGCAGTCGAGGGCGACCCGAAAGCTCCCA
GTTTGTATAGCTGTCTACCCGAAGGTACGGGAGGGCGCCACTCCTTGCCC
TGGATTTCTCCACTTACCCTTGATCTGTCTCTTTAGTTGCTGAACATCAA
GTAGAACGGTATCAAGTACCATTTTGGGAATCTTTGGTATGACCCGGCTT
TGGATCGAACCCACAACCTTGTGTACCGTAGCTGGATGCTCTACCTTCAT
GCTACGGTCGCAATAGCTAGCTAACCAGTAGCGTGGTGGGTCGACCAAAA
CTGGAGAGGCAATTTTCGAAAGTTGGGATTTTGGGGCCCCCTTTTAAAAT
AGAATATATTTGTAAAAATTACGCGAGCGAAGCTGAAAACTGCTAATTCT
AAGGTGTAAAAAAGCAGAGGGGTGCCGAAATTTGTATTTCAGTCCCCTCC
TCCAAAAAAATCGGCCGCGGGGGGGGGGGGGGCTGGGTTGCCCCCCCCCC
CCCGGGGCCCCTTTTTTTGGGGGGGGGGGGCTGAGTTGCCACCACGCTCC
TGTAGGTAACCCGATGTCATATAATATGAGATAATTTTCCTCTTACTGTT
TTCCAGATTTCTGGGACACAGAATCCGAATCGGATTTTGATTTGAGCAAT
GCTGGGCGATCGGGAAATCAATCTTCACAACAACAGCAACAAGGGAAAAA
GGATGATGACGATGATGATGATTTTGATTTCGATTTCTATGATTGAGTAT
GAAGAAGAGAATTTCTTTTGGTAATCGTATGGATTGGGTGATCATTGTTT
GCTTGCCTGATCTCATTATCTTGGTTGGCTAGATATTATTAGCTATTTCA
CAGCTATGCAGATTGGTTGGGAATGGTTCCACAGTCAAAGTAAAAAGCTC
CCATCAGTAGAAATCATAAGATCAAAAAAAAATATATGAAAAATATTTAT
ATTCCTAAAGGAGTTACATATTAGATTTTAATATATTTTAACTATTTTTA
AAAATTGGAGTAATTTTTGTTGATACGGATTTTTTTCATTGTATATTTGT
TTGTTTATTTTTCAAAAATTGTTGTTTTATCTCAAGTTCATTTTTATCCA
TTATACCTGTATTGAATTTTAATATATTTTTTGAACATTTTTACACAAAA
TATTTAAAAGTATGAACCTCGTAAATATTCCAATGATAAAATGCAAGTTT
TACTGTAAAATTTA

Coding sequence (CDS) from alignment at sc0000011:503879..515192-

>TCONS_00001678 ID=TCONS_00001678|Name=TCONS_00001678|organism=Clytia hemisphaerica|type=CDS|length=3036bp|location=Sequence derived from alignment at sc0000011:503879..515192- (Clytia hemisphaerica)
ATGATACTTCCCTCGATAATTCACCCGAACGCCCTTTCACAAGTCCTGAC
CGCCCTCATAGAAATGCTAGAACTAGCCCATCCTANTCTCGATAATTCTC
CCGAACGCCCTTTCACAAGTCCTGACCGCCCTCATAGAAATGCTAGAACT
AGCCCATCCTATAATAGCCATCACATTGGCCAATCCTACATGACACCGCC
CTCTCATATTGGAAGGACATATCCCGCCCATCCTGATGACTTTTTACCGC
CAAATGAATTCAATCACCGAATGTCTTCAACGTATAGACGAGAGGAACCT
TTTAGAACTAAATCAGAGCCGTTTCTACCAGTAGGTCGAGAATTCGAAAA
GTCTTCTATACATCGTGAAGAATCAGGCAAAACTTTCACAAACCAGCCAA
GCATACATGATTTGCTTTTAAACAATTCAGTCAACGCTCAAAATACTGAT
TTATCAGACATCACGATATTACCACAACTTTTGGGTGTCAGTCAAAACGG
ACAATTAGTTTTAGTACCTTTGGCTGCCTCTGTCAATCTGAACTCCTCAC
TCAATAATACTTTCGACGGATTAAACGGTGCGAAACAACGAGCTAGTCCT
GTTGGTCAAAATAGTGAATCAGTGAATCAGACTTTTGACGATAGCCAACA
GACCGTGAAAACAAACGGATCTGTGACCCAGAACGTGTCTGTTTTACAGC
AGCGGCAAAATAACGATCATCCAAATTCTGGTTCGTTTAACGATCGCATA
AAGGCGGAGCGTGAAAGCCAACGTTTGAATTATATCGAGTTAAAGAGATT
GGAGAAGGAGAAAGCGAAGAGACTGCAAGAAGAAGAGAAGGACTTGAAAT
TGCAAGAGGAGAAGCAAAGATGGCGCGATTTGGAGAATGAAATCGAGCGA
AAGAAAGTAGAAGAAGAACGTCTGAAAGCTGAGAAACTGGCTCAAGAAAA
GAAAGAAAAGGAACAAAAACAGAGAGACAAAGAACAAGAAAAATTACTTA
AACCACAAGAATCTCCTGCTCTCAAGAAACAAAAATCACCCATGTTCTCA
AAACTGAAAAGTTTAGCTAAATTCTCACCGTCTACGAGACGAGATTCTAA
ACAAGAAGCTCCTGCCGTGGTAGTTGAAGAGATTGCGAAGGAGCCATCCA
AGGAGGAGATGCAAGAAAATGAACCACCCTCCTTCTTTGGTGATGATGAG
GATCTTTTCCCTGATGACGATTCAGAAGATGAAAATGATCTGCGCCTTCA
TTCGAAATCGATGTCTAGAGCTATCAGTGATATTGAAGAATTAAGCGAGA
ACTCCAGTCGACAAACACCTAAAAAGAAATCACCAATACAATCACCGAGG
TCTTCTTCAGAACCTCTTAAATCTTCATCCACACCTCAAAGCCGGCAACA
ACAACCTCAGATTCAAGAACCAAGTCCTTTAGTATCACCACTAAACAACA
ATCACAGTAGTAGTGCCAACGATTCATTGACCAATCATCCTCGAAGCAAC
AAAGAATCACCACCGTCAGCAAATCATTCAAAAACCAATAAAGATTCTTC
ACTCTTCAGTGACTTCAGTGATCATTCTGAATTTGATTTACCATCAAATA
AATCAGTATCTCCGCCTCAAACGAAATCTTCTCCACCTCTTACTTTATCT
GTCGTTGCCAAGCAACCTGCTCGATCACCACCAGTACCTGCATTGCAGAA
ACAAAGAACATTCTCACAAGATTCTCATGGTGAGACGATGGACGATTACC
AACCTTTGTTGTACATCATGGAAACGTTGACCGATAAAGTAAAAGATGAA
GAGAGCGAAGAGGTTCTTGTCCTCAACATCGATATCAATACTAACCAAGC
GAACACCATTATCGGCACTGCTGAATTGGAAGGTAATGTGAAACAATTCG
ACTCCAGCGAACTTTGTATGTCGTATCGTTATCATTTACAACAACTAATG
GTCAAGAAAAGTGATCGACCTTTCCTCATTCATGACGTTGATGCTAATAA
TGATTTCGAAGGAAATTTAAGAGATTGTGTGGATTCTTGTTACCTGGAGA
TCTGGGACTCTTTATTTATCTTCTTGACAGAGATAATGTCCGCCTTTGAA
TTCGACCCCGTGCAAGTGGCCACAATCTTCGCCAATGTTTTGTTACCGTC
ACATGAAAAGCAACGAAAGCAGGTTCTATCTTCACTTGGCAAAATTTTGA
CTCACTTATCCGAAGAAAGTTTTGAAACTGAAAATGAAGACGGGGAAAGC
GAGGCTGGTCCCATAGCAACCAATAACGTTTCCATGCCAACCCATAGTAA
CATCAGTATCACGGAAGAAATCCACACTCGTGGTATTAGTAAAACGTCTA
AGAGTGAACCTCTCTCGTCAACGTACGGTGGTGGTAAAAGCACTACGGAG
AAGGGAGATTTATCACAATCGCTCTCCTTTGAAAATGAAGATGAGAACTC
CTCCACGCTGTCTTTTGATTCAGATGGTCTTCCAGTGCGCCGATCAAAAC
AAACCAATAAGCAGCAAGATTCAATCTCTCAGAATAACAGTACGCTTTCA
GAGGCTAGTTCCAACCTCAATTTGAATGGATCAAAGGCTTACCAAGAGAT
GCGTCATGAAAGTTTGATGAGTCCGGTACATGAAAGTGTTGATGATGATG
ACGAACTTGAAGATCTTCTCGGTGAAAGTATCGGCCTCAATAAACGACCA
CAAAAAATGACTTCGTCGCCCCCGCCACCGGCAGCTCCGTACAGCACGGA
GAACAACAACTCTACTAACGATCAACTGTCAAAGAAATCTTCTATCAAAA
TGACACCATCCAGTGATCTTATCACACGCTCGGAATCATCTTTGACTTCT
CAAACTAAAAACAAAAACCAAAAGAAAATGGATGTCAAAAAACCTGATTT
CTGGGACACAGAATCCGAATCGGATTTTGATTTGAGCAATGCTGGGCGAT
CGGGAAATCAATCTTCACAACAACAGCAACAAGGGAAAAAGGATGATGAC
GATGATGATGATTTTGATTTCGATTTCTATGATTGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_000872	XLOC_000872	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00001678-protein	TCONS_00001678-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000011	supercontig	sc0000011:503879..515192 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.06382	6.69725	3.75072	2.35675	14.6098	10.7295	10.6413	11.5234	5.85819	9.82767	7.38349	5.0152	6.87622	6.09694	5.94508	8.27919	7.55839	9.02513	5.53504	6.87153	4.95311	5.53161	14.5615	13.2677	24.2351	19.68	3.1348	3.05879	11.7967	12.7049

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00001678 vs. Swiss-Prot (Human)

BLAST of TCONS_00001678 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00001678 (transcript) - C. hemisphaerica