TCONS_00001786 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001786
Unique NameTCONS_00001786
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2771

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001786 ID=TCONS_00001786|Name=TCONS_00001786|organism=Clytia hemisphaerica|type=transcript|length=2771bp
ATTGTTGATTGACTTATTGAAAAGAAGTGAGACTGAAGTTTGAGTAGAAC
TGTTTGGTTTATGTAAATAATGTTTACTTTGAAAGGAATTATGTTTTGAT
AGGGTAACAAGTCGAGGAATAAGTTGCTACTTACAGAAAGGAAAAAATTG
TTTGACATTCTACTTTGGGTCATTCTATTTTTATCAAGCAATCCAATTCT
ACTGCACATTGGTTATGAATAAAATATTGACGCATCGATTTGTAATATGG
TTTTTGATGTTATATCCAGCATACATAACAATCGCAAGGGGAACAAGAAC
AAAAGACAGGACAAGAAGAAcagAGACACGAGGGATCAGTGATGCTTATG
GAAAATTGTgcacaaacaaaacaaagtttGAAGAAACATTAGCATCAAAC
CATCTCTACGACGGTAAAAAGTACAAATTTGAAGAAACACAACTTTTCCT
AAATGAGACCAATCGACAATGTGCATCGATTTCACAGAGCACGTGCAAAC
TGAAAATACAATGGTCATTACAAGATGATGAAAAAACTGGAAAAGAATTC
TACCAAATCAGTTACTCCTTACAAAGTATTGATTGTTGGAAAGTAGGCGT
TGTCGTTGAAACAGATGATCAAACTGCAAAGCAGATCAAATTCAACTCCA
ACAAAGATGGTGATTTGAAAATTAACTTCATTTTGTCATTCCGTTATCAA
ATCTCAATTGTACCTTTACCGAGTGGAGAGATCTACCAAGAACTATTTAT
CGCACCAACTATTTGCGAATTAGAAGCAATATATGACATTTTGGAAAAAG
CGGGGCCTGAAATTCAAGAATGCAGTGCCAAATTATCTTACAAAAGGATC
CTGAAAGAAGCTAGGGTATTTTGCGGAAATAATACAATCCCTAAAGAACA
TCGGCGCTCCAAAATTCGTAACGAGTTGCATATCACCGAGCAATGTACGA
TCGTTTACGATGAAGATTACGATATGAAAGACAATAAAATCAATGTTCTT
ATGGTTTATTTAATTGTGGCAATTCTTTTTGTGATCGTGATGTTAGGAGG
TTGTATAtggtttttgaaaagaaaaaaatcgacATCGGATCAACAACAAA
AGCTGTTTGGCAAAGGCCTTCAAGACCATCAGATTTCTGAAAAAGgTATT
ATATCTGTCATGGTTGTTCATCGTCCTGGATGTGAGTACTTGGACAACTT
GGTGCAGCAATTTTCAAGTATGTTGAAATCGTATGGCGTGAATGTTCACG
TGACCTTTGAGGTGGACGATTTGTCAGCTGAAGGCGGTATCGCATCATAT
TTACAACGTTATATGCAAATTTGTGATTACGTCATCATGTTTGTAACAGA
TAACCACAAAGACAAGAACATTCTACTGAAACATCGACCGTACGAATTTG
GACTTCGTATATTAGAAGGAATGGCTTTACACGAGACCACAAACCATCAA
GCACAATTCATTCCTGTTTACATCATAAAATATCGGAAAGCCGTTCAAAT
GTTTCCTACATTTCTCATCCAATCAAATGCAGGTTATGGATTCCAGCTCC
CAAAACAGGCAAATGATTTGATACGAAGGTTACGGCAGACGAAAACCAAA
TCTAAAGACCAATCTATTAAAGATGGTCTCTTTATAACAGAGATGGGTGA
TCTGAGCAAGCAGTTTTTAATGCAACAACATTCGGATTGTAATAGTGAAC
ATTGTCATAAGGGTATGAGGCACACCAGCACTGCAAATCTATCATCCGTT
TGGGCGACAACGGTCCACAGTGAAAAGAACCGGCACCGAAAATCATCACG
TGACAGTCACGTGTTTgacgaagatgaagaagaagattaTGATCAACTTT
TACTCAAGGAAAAAGAAATGTCAGATATCCaatatcaaaaaacaaaagCA
TATCTACAGATGATGAGTCACGAAAGCCAAGCTACTGATCAGACAGACAT
TACTTCATTAGATTCAATCGGTGATACGGAGTCTTTATCACCTAACCATT
TGAAAAAAACGTATCAGGAACACTGTGTGAGGGATGGGTACAAGAGAACT
AGTAGGAGTAGTGATGAAGTTTTTTGTGATCAACAACATCGTCTGTTGCG
TGGAGAAGATTGTAGTTTTGATACCACGACACAGTGTTGATGTTCCTAGA
AAActgagaaaaaacaaaaattaaaggaAGGTTTATTTAAATTATCAGAA
GAATATATGCTTTAACAATTGCTCCAGCCTAGcaatgtattttttatttt
catgttttgatgaTTCTGGGAGAACTTGGAAATTTCCCAACATATACCTG
TCAAGCTGACATGATTGAAACCGAATagcatttttgattttctaagcgaa
ttacaaagatttttaaattaatcaagaattttttgaggtttttatCTCGA
CGGGAACTGTGGTTACTGTTCGAACGAAAAGGTTCGATTAATACTTTCGC
GAGCTCATGCAAataaaaaagttcgattaaattcgGGTTAGGGAGAGTTT
ACTTCAAATCATATCTGGGCGAGGGCGGTTTTAGTTTTTTAGGAGCTAAC
AAGAAAGGCGAAAAAAAACAAGGACATTCCCTTAAAGGCTCAAAAATTCC
ATTACGCATCTGTTTGTTCAAAGTTTGGAATTTGgcatttaaaatttaat
ttagttttttgtattttcatctTATCATATAAAAACTGTTGTACTTTTTT
TCTGGGTAAATAATTTTGCAGATGTACATACATATAacctattttataag
aacaatctaaCATGATCGTGG
Run BLAST on NCBI

protein sequence of TCONS_00001786-protein

>TCONS_00001786-protein ID=TCONS_00001786-protein|Name=TCONS_00001786-protein|organism=Clytia hemisphaerica|type=polypeptide|length=641bp
MNKILTHRFVIWFLMLYPAYITIARGTRTKDRTRRTETRGISDAYGKLCT
NKTKFEETLASNHLYDGKKYKFEETQLFLNETNRQCASISQSTCKLKIQW
SLQDDEKTGKEFYQISYSLQSIDCWKVGVVVETDDQTAKQIKFNSNKDGD
LKINFILSFRYQISIVPLPSGEIYQELFIAPTICELEAIYDILEKAGPEI
QECSAKLSYKRILKEARVFCGNNTIPKEHRRSKIRNELHITEQCTIVYDE
DYDMKDNKINVLMVYLIVAILFVIVMLGGCIWFLKRKKSTSDQQQKLFGK
GLQDHQISEKGIISVMVVHRPGCEYLDNLVQQFSSMLKSYGVNVHVTFEV
DDLSAEGGIASYLQRYMQICDYVIMFVTDNHKDKNILLKHRPYEFGLRIL
EGMALHETTNHQAQFIPVYIIKYRKAVQMFPTFLIQSNAGYGFQLPKQAN
DLIRRLRQTKTKSKDQSIKDGLFITEMGDLSKQFLMQQHSDCNSEHCHKG
MRHTSTANLSSVWATTVHSEKNRHRKSSRDSHVFDEDEEEDYDQLLLKEK
EMSDIQYQKTKAYLQMMSHESQATDQTDITSLDSIGDTESLSPNHLKKTY
QEHCVRDGYKRTSRSSDEVFCDQQHRLLRGEDCSFDTTTQC
Run BLAST on NCBI

transcript from alignment at sc0000012:477915..487235+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001786 ID=TCONS_00001786|Name=TCONS_00001786|organism=Clytia hemisphaerica|type=transcript|length=9321bp|location=Sequence derived from alignment at sc0000012:477915..487235+ (Clytia hemisphaerica)
ATTGTTGATTGACTTATTGAAAAGAAGTGAGACTGAAGTTTGAGTAGAAC
TGTTTGGTTTATGTAAATAATGTTTACTTTGAAAGGAATTATGTTTTGAT
AGGGTAACAAGTCGAGGAATAAGTTGCTACTTACAGAAAGGAAAAAATTG
TTTGACATTCTACTTTGGGTCATTCTATTTTTATCAAGCAATCCAATTCT
ACTGCACATTGGTTATGAATAAAATATTGACGCATCGATTTGTAATATGG
TTTTTGATGTTATATCCAGCATACATAACAATCGCAAGGGTAGGTTTCAA
GAAATTATATcatttctgctgtttttttaTGGACAACGTAATGTAAACAA
ATAAACATCCTTTCATAAACATAATTTCTTGAGTGCAAGAGAATTGACTT
TGGCCAAAAGTTATAAAGAGCAAATTAAAGATCTTTAAAAGAGGCAAAAA
GAATTGTGGTTATTTTTAAGCATGTACACGTTGTTTTAGCTACAGTATAC
ATAACTATTTtattctaacctaagaatatcataagaatattttggaattt
ttcccaaaaaggtaagaatatccataatgaaattgataaaaactattttt
ataaaaaacgtgcattgGTATTCACTCCACTGGGgagggggtcccaccgg
gtctgtgagaagggtgtaTGTCTAAGACCTTGGAAAGACTTAACTTAACT
CCGATGTATTCTAGATTCTAGACCAATGAATTCTTAGCAAGCTCAGTTTA
TTGTAATTGCTTTCGTGCCTTGGACCAGAAAAATAAGCCGTTTTTTTATC
GGGCCAAAATGAGACACATATGCAAGAACTTATCCGGCGGttataaaaac
atgtatgatttttctaattttaaaactttgaagaGGTCACCTATATTATA
TAAAATCAAGAAGATctaaaaattcatgaaatatttACAGGTTTCGATCG
CGCCTGCATACACTCACTCATAAGACTTCCTAGCCATAATGGCTAGCTTT
GAGATTTTCCGTTTATCAGATTTGCTTGAGACAGCTAGGTCATATACTTA
GTTGCTTGGTACGTCTTTCCCatcttttatataagaaccattAAATTTCT
TCTTATGGTTTTCTATATATACATACTCTTTTTATTGGAACAATTTTGTA
AGAAAAGCGGGGCTCAAATATgctagaaaatgaagaaaataagcAAAATA
TTCAAGATCAAATTCAATACTAGCTGAAGCCTAGAATGACTTAATTTTAA
GcaactttaaaaagtcaaagttAAAAAAGTATGGCGTTAAAGTTTAAAGG
GGTACAACGGTAGTAAACGAAAACATTGGGGACCTTTAGCATATAGGACG
GCAGATTTGAAAAAGTACGGCAGGATTGAACTAAAGGAAAGCTCTAAGGA
GTTGATATCTGGATCGCAGCTAAATTCAATCTATTTTCTCATGAGAATAG
AGAGTTTTAATAGGGTAATTAATAGACGTTTTCAAATCTCAAGACGactt
caaaattcttttttgacgtcGTGTTTAGAACAAAGACGGTAAAGGAAGAG
TACAATAGCTTTAAATGAATGAATCCCTCGAGAAttataacgtcattttt
tataaaaacttgactgtatttcaaatttttccatgTGATATTAAATCTAG
ATAAAATTGGATAGAATTTGCcatttgattttaagatttacttCACGTCC
TCATTCAAGTCGCCGTCCTAGATGCTAAAGGTCCCTATTGCACGGGACAC
GGCTATAAAACGAGACAAACAATCCATTTATCCATTTATATCTTCCCTAG
GGAACAAGAACAAAAGACAGGACAAGAAGAAcaggtaaaatttcaaaata
attaattttatactTTACACATCTTTCCCCCATTTTGCCCTTTCCATATT
GGAATTAAATCGTTCTGAAGTTACCTTATGGTCAACCAGCAGAGCAGCTA
CCGACGAATTTAGAAAGCTCACCAACAATGATGAACCATAAAAACGATTC
CCTCTTTCAGtatttttgaacaatttccagggtggaaatttttcaatttt
tcatctacttCGTAATCATTTCTCCACTTTTTAGGGTGAAAAAGGTTTCG
ATTTTTTGCTCTGACAGGGTAAAGCTTACCAAGCATTtttatctgacagg
gtccacttttcaaactccaggggcacgtccccgtcggccgtcaaggtcag
tgccctcCCTGGGTAGAAGCCCTTAACCATAAAGACTTAGTTTAGCATAC
ATTCTTgatatataaattatttttgtttcttataagAGACACGAGGGATC
AGTGATGCTTATGGAAAATTGTgcacaaacaaaacaaagtttGAAGAAAC
ATTAGCATCAAACCATCTCTACGACGGTAAAAAGTACAAATTTGAAGGTA
ATTTCCTCTACTTTCATTCCTGAATTTGACTTGTTTACGTAGGCAGTTAA
CGTACGGGAATGataaaaaactaagaaatgCAGAGCGATGGCTTATGTCG
TAAAATATATTGTACTGAGATTCGGAACATTAATTTTTTGATCAGAGAAG
TAAGTTTTGCAACCACTTTTAGCGCCGaagcagtagcgtagacaaggggA
CGCACAATTTGTGtaagagagcagatttttatgccaGACGATGTCAACCA
AACGCTATCGAACCAATTTTTGTaattgaacaatcaaatttTATCGAACT
AATCGGATGATAACTGTTCAAttaccgaaccaaatcgaacagtaatcgaa
ctttaccgTAATTTTCTACTTGATCCATTCAATTGctttcgattagttcg
atagaGTTCGATGCGTGTTCGATAGTATTAGATGAGTGTTCGATAGATTC
GATTTGCGTATCACGAGTCTAGCTCATCAGTAGACTGCTAATACCCGTCG
TGTTTGCGTGATATCGctggaaaagtgagcgtaggagctAGGTTAGCGAG
AGAGGAAAAAAGTCAGCGGCAGGGGTTGAAAACCCTAATCAGCTTATTTG
ATATTctgatggcgtattggcggccgcccacgctgaagctctaaaggagc
gggatAGTAGTCGCCAATTGATGTGCCGAAAAGCGCAATCGGGCTGTGCG
ATTGGTAAGCACCCAATACGGGGGCTGGCGTCCAGACCTCCACGCCCAAT
CGCTCTTTATCTTGCTGCTCTCTGAGACAATTAATTAGCAGGCTAGTCCT
AGCTCATCAGTGGTTGTTTTCCGATCAAATCCAgcagcgtagacaggagg
ggcgcaaaatttttGTAGGAGAGCAAATTTTATGACACtctaattatctt
tttacattatgaatagataattacagtttCATGAAAATCTGCTCTCGtat
acaaattttgcgcccTTCCTGTCTATGCTACTGAAATCTCTACCTTTTCA
TTCTTTGTGCGCACCCGTGCGCTTTGACGAACAAAACTACCAAAGTGGAA
TGCAGCCTTTAGAGTAACATGCATGGCAATCGAACACATCAAACTATAAT
CGAACTgaatcgaacagtaatcgaaaTGATCGACTTGTAACCGAACAGTA
ATCGAATTTTACCGGAATTTCTCagttcgattactgttcgattcAGTCAT
AAAtgtcactttttttatataatgaGATTAAATAACCAGGTCAAAGACAA
GTCACTTATTCTTTCGTACATAGAAACACAACTTTTCCTAAATGAGACCA
ATCGACAATGTGCATCGATTTCACAGAGCACGTGCAAACTGAAAATACAA
TGGTCATTACAAGATGATGAAAAAACTGGAAAAGAATTCTACCAAATCAG
TTACTCCTTACAAAGTATTGGTAAGAAGTGGTTCTGCACTTTTctcaaaa
tgggcttttccagaaaaagatttCAAGAGACACCCCCTTGGATTTCTTTG
TAGTTTCAAAGACAACCCCTAATTTTCCAGACTTTTATGGAACCCCTAGA
TTTTTTCGTGAAATTTTACAGGATTTTATAATATAAGGGATTTTCcaaag
tatttcttatcaaaccTGCTTAATTCATTGCAAGCAATTTTTTTGTCTAG
ATTGTTGGAAAGTAGGCGTTGTCGTTGAAACAGATGATCAAACTGCAAAG
CAGATCAAATTCAACTCCAACAAAGATGTAAGAACCTACGACCAAGGGGT
AAACCACTCaaaaaaatctcgtacacattttcaaaaagtcaaaaaaaggt
ctgtaaaaagtcaaaaattctcaTCAATCAGCGAATGGGCAGAGGAATAT
TTATGGACGGTGGTTATTGAaactattttttcggaaaaaaaagtcaaaat
aaaagtccgaaaaagtcaaaaaaagtcaaaaaatcaaatgaaaattcaaa
gtcAGAAATTATCGTACACTTTTTTTCAAGTAGTTTACCCTTCGCCTACG
ACATTATATTTTTGCGTTTATATCACTCTTTTACACGTTTATTGCGTTAA
TATAGTGCGTTGTACAGAGGATAAACTTTAGACATTCATTTCTTATTACG
GCTTGATTTAAAGcaaaagatgaattttcaatGAGTCTAGAATGTAATAA
AAGGAACAAGGTAAGAGAGACCAGCCCTGGGTTTGGTACAGGTTACTTAG
AATCGTCTTTCCTCAAAGTTAAGAACACAACTGACACTACTGGACAATAA
TTATTTGATGTCTCTTTCTGACTTATGTAGGGTGATTTGAAAATTAACTT
CATTTTGTCATTCCGTTATCAAATCTCAATTGTACCTTTACCGAGTGGAG
AGATCTACCAAGAACTATTTATCGCACCAAGTAAGAAATACTCTtaacat
aataactcgtacactCAAATTCGAGGCCAGTCCAAAAGTTtgctttttaa
agattttgatagCGCTCACCCAAGCCAAGGTATGTATCACGTCCATCAGA
AAATCAgtggtgcaagtggctctggTTACAGTACACCTTTTTAACAATAG
AACACCGAATTAGCAAATTACGTAAGGGGAAAAATATAATCTAGGAATTT
TTTATCAACCTCTGCGACAAACTCTATCGTCGTTGACCAAGGATAGAACC
CTACCTTAACCTGATTAAGTATTTCAACAATTGTCTTACTGAATAAGCTA
TTGAATATCTTCATATCTACAATACAGACACCCTTGGCAGGTAGCTCTAC
GGAAGATCTGATATTCACAACTGGTGACAATTTTATCCCCTTTCATCTTC
TTTTCAGCTATTTGCGAATTAGAAGCAATATATGACATTTTGGAAAGTAA
GTACAAACCTAACTCGTGGTTAAAGTTTTCAGAATTTAATCTTTAGAAAT
GTAGAAAAATATatgacacccctttctcacagacccactgggaccccttc
ccactggaaggattggcaaaaatatcgtcccggtggaaaattacagctaa
tttttgtccctgctaaagataatcagataagcaaatcctcacaaaatatt
gtactattttttccatccccactgaattttctggctcgaaaacaatggat
ttCAAATCTGTAGCCACAAAAAATTGGGAtaatcaatccccatcgagtta
tggtccgttatttttatccccactggctaaaataaatctcaccgggtctg
tgagaagggttgTTATATGATTGATTCGTATCGAGAATTTCATAGATCAT
ATACGATGTGCAAATGTTGAATAAACCTAACTTATCTTATCAACTTGTGA
TTTTAGAAGCGGGGCCTGAAATTCAAGAATGCAGTGCCAAATTATGTAAG
AATTTTATACTTATTCCGCTTTTCTCGGATTGAATTTTAAGGCTCCTGCT
CGTCAGAGTTTTTGTTCCGCCGTAATCTTGTTTATTCCACTCAGTCTACC
AAATTCACTAATACTGCACGCAATGAGATCTTGCTGTCAAAGGCTAGAAA
AATCCTCAAACTAATATTTGAAAGAGTCTAAGTTCTTTCTTTCTTCCGCG
TggtacattttttgaaatctggtGGCAAGATATTACTTTTAAACTAGCGT
CTAAATAAAGATAACGCCAGGCTGCACAACCTTATTTAAAAATCAACTTA
TATCGGCTTCAAATTCTACTTGAGATTTACCTCTAGTATCTTATCAGCCA
GCCACTGAATCCTTTATCAAAAAAACAGACGAAGAATCATGGTGACTTAA
AATTTCTTTCTAGCTTACAAAAGGATCCTGAAAGAAGCTAGGGTATTTTG
CGGAAATAATACAATCCCTAAAGAACATCGGCGCTCCAAAATTCGTAACG
AGTTGCATATCACCGAGCAATGTACGATCGTTTACGATGAAGATTACGAT
ATGAAAGACAATAAAATCAATGTTCTTATGGTTTATTTAATTGTGGCAAT
TCTTTTTGTGATCGTGATGTTAGGAGGTTGTATAtggtttttgaaaagaa
aaaaatcgacATCGGATCAACAACAAAAGCTGTTTGGCAAAGGCCTTCAA
GACCATCAGATTTCTGAAAAAGGTATGGGAGAAAGCTGAAAGATTGAATA
TCATTTttattgttatcatttcatttTTCGCGACTTCAAGACCtgaatgt
ttttaacatgtttttttatagattACTTTATTGATATATCGGCTAAAAAG
GTATTTAAATCAAGCTAAAGAATAATTCAATCTGAGTTTGTTCTTAgggc
aaatttcagcctcatACTGTAATAAGATTTTTATTATgaataaaaaagct
tgtattttcttcttcatttaaggTATTATATCTGTCATGGTTGTTCATCG
TCCTGGATGTGAGTACTTGGACAACTTGGTGCAGCAATTTTCAAGTATGT
TGAAATCGTATGGCGTGAATGTTCACGTGACCTTTGAGGTGGACGATTTG
TCAGCTGAAGGCGGTATCGCATCATATTTACAACGTTATATGCAAATTTG
TGATTACGTCATCATGTTTGTAACAGATAACCACAAAGGTAAAAAGTTCT
TTCAGAAGAGACTTTTTCATCTACTCCCCAGTAGATAGAGGATATACCAT
ATTTTCCAATCATCTATTTGATCCATTTTATCCCCTGGATACGTGTTTAT
CTTTAACTCTTTAACAAACACAAAAACGAACTAACATTTATCCCGAGTCA
TTTATTACAAATTCACCCAATAGACTTTCTGATCtttatctttctttctt
tagACAAGAACATTCTACTGAAACATCGACCGTACGAATTTGGACTTCGT
ATATTAGAAGGAATGGCTTTACACGAGACCACAAACCATCAAGCACAATT
CATTCCTGTTTACATCATAAAATATCGGAAAGCCGTTCAAATGTTTCCTA
CATTTCTCATCCAATCAAATGCAGGTTATGGATTCCAGCTCCCAAAACAG
GCAAATGATTTGATACGAAGGTTACGGCAGACGAAAACCAAATCTAAAGA
CCAATCTATTAAAGATGGTCTCTTTATAACAGAGATGGGTGATCTGAGCA
AGCAGTTTTTAATGCAACAACATTCGGATTGTAATAGTGAACATTGTCAT
AAGGTAAACATTTTATCTTCAATAACTTTGATTAGTTCGGGAAATTGCAT
AGAATGACAGCACTGCGAAATTCCGTAACTTTAGCGTTGTCAAATTTTGC
AGTTTTTTCCACTGTAAAATTTGACAACGCGTCATCTTTCACAATCATTC
TTGGCAGTAAGgctactttttttaaaagagcgCTAATTTATTCTAAAGAG
TGAGATTTTGTCTGGTTTCGCTtgttatttaaagaaaaattcccGGGTAT
TTATGATTTTCAATCACAGGCTTCAATTGGAAGCGTTGCGTAGAATAGCA
GCGCACCTGTTAAGCACCCCGTGGAAGCGttgcgaaaaatcaaaatttag
caGAGCTGTCATTCTATGCAGCTTGCCGTACTAAAAAAGTTGGTGAACAA
CATTTGTTTCACGGAAAACGTGGATGTTAAATATACTATATAATGTTGTA
TATGTGCGGGGAAGTAGGCTTACCAACTGACGGCTTGTGTGGCGAAAAaa
ctggcttttagaatcgcagtGCAGTGCAgctaaaatttgatgaaattcat
acccttatagtgcatttttctcaaatttttaactgttttagagcaaaaaa
ttcagaattttcGGGCAGAATTTTGCAATTTCCTAGACATTTCCCACATC
TAGTCTAATATCCTAGGCAGAGTTTTACATCTTTTTGATAAGTACCTTTA
CAAATATTTGTCTTTTACAATTTGTCTTTTACAATTTGTCTTTTTATAAT
CATTTTTTTAGGGTATGAGGCACACCAGCACTGCAAATCTATCATCCGTT
TGGGCGACAACGGTCCACAGTGAAAAGAACCGGCACCGAAAATCATCACG
TGACAGTCACGTGTTTgacgaagatgaagaagaagattaTGATCAACTTT
TACTCAAGGAAAAAGAAATGTCAGATATCCaatatcaaaaaacaaaagCA
TATCTACAGATGATGAGTCACGAAAGCCAAGCTACTGATCAGACAGACAT
TACTTCATTAGATTCAATCGGTGATACGGAGTCTTTATCACCTAACCATT
TGAAAAAAACGTATCAGGAACACTGTGTGAGGGATGGGTACAAGAGAACT
AGTAGGAGTAGTGATGAAGTTTTTTGTGATCAACAACATCGTCTGTTGCG
TGGAGAAGATTGTAGTTTTGATACCACGACACAGTGTTGATGTTCCTAGA
AAActgagaaaaaacaaaaattaaaggaAGGTTTATTTAAATTATCAGAA
GAATATATGCTTTAACAATTGCTCCAGCCTAGcaatgtattttttatttt
catgttttgatgaTTCTGGGAGAACTTGGAAATTTCCCAACATATACCTG
TCAAGCTGACATGATTGAAACCGAATagcatttttgattttctaagcgaa
ttacaaagatttttaaattaatcaagaattttttgaggtttttatCTCGA
CGGGAACTGTGGTTACTGTTCGAACGAAAAGGTTCGATTAATACTTTCGC
GAGCTCATGCAAataaaaaagttcgattaaattcgGGTTAGGGAGAGTTT
ACTTCAAATCATATCTGGGCGAGGGCGGTTTTAGTTTTTTAGGAGCTAAC
AAGAAAGGCGAAAAAAAACAAGGACATTCCCTTAAAGGCTCAAAAATTCC
ATTACGCATCTGTTTGTTCAAAGTTTGGAATTTGgcatttaaaatttaat
ttagttttttgtattttcatctTATCATATAAAAACTGTTGTACTTTTTT
TCTGGGTAAATAATTTTGCAGATGTACATACATATAacctattttataag
aacaatctaaCATGATCGTGG

Coding sequence (CDS) from alignment at sc0000012:477915..487235+

>TCONS_00001786 ID=TCONS_00001786|Name=TCONS_00001786|organism=Clytia hemisphaerica|type=CDS|length=1926bp|location=Sequence derived from alignment at sc0000012:477915..487235+ (Clytia hemisphaerica)
ATGAATAAAATATTGACGCATCGATTTGTAATATGGTTTTTGATGTTATA
TCCAGCATACATAACAATCGCAAGGGGAACAAGAACAAAAGACAGGACAA
GAAGAAcagAGACACGAGGGATCAGTGATGCTTATGGAAAATTGTgcaca
aacaaaacaaagtttGAAGAAACATTAGCATCAAACCATCTCTACGACGG
TAAAAAGTACAAATTTGAAGAAACACAACTTTTCCTAAATGAGACCAATC
GACAATGTGCATCGATTTCACAGAGCACGTGCAAACTGAAAATACAATGG
TCATTACAAGATGATGAAAAAACTGGAAAAGAATTCTACCAAATCAGTTA
CTCCTTACAAAGTATTGATTGTTGGAAAGTAGGCGTTGTCGTTGAAACAG
ATGATCAAACTGCAAAGCAGATCAAATTCAACTCCAACAAAGATGGTGAT
TTGAAAATTAACTTCATTTTGTCATTCCGTTATCAAATCTCAATTGTACC
TTTACCGAGTGGAGAGATCTACCAAGAACTATTTATCGCACCAACTATTT
GCGAATTAGAAGCAATATATGACATTTTGGAAAAAGCGGGGCCTGAAATT
CAAGAATGCAGTGCCAAATTATCTTACAAAAGGATCCTGAAAGAAGCTAG
GGTATTTTGCGGAAATAATACAATCCCTAAAGAACATCGGCGCTCCAAAA
TTCGTAACGAGTTGCATATCACCGAGCAATGTACGATCGTTTACGATGAA
GATTACGATATGAAAGACAATAAAATCAATGTTCTTATGGTTTATTTAAT
TGTGGCAATTCTTTTTGTGATCGTGATGTTAGGAGGTTGTATAtggtttt
tgaaaagaaaaaaatcgacATCGGATCAACAACAAAAGCTGTTTGGCAAA
GGCCTTCAAGACCATCAGATTTCTGAAAAAGgTATTATATCTGTCATGGT
TGTTCATCGTCCTGGATGTGAGTACTTGGACAACTTGGTGCAGCAATTTT
CAAGTATGTTGAAATCGTATGGCGTGAATGTTCACGTGACCTTTGAGGTG
GACGATTTGTCAGCTGAAGGCGGTATCGCATCATATTTACAACGTTATAT
GCAAATTTGTGATTACGTCATCATGTTTGTAACAGATAACCACAAAGACA
AGAACATTCTACTGAAACATCGACCGTACGAATTTGGACTTCGTATATTA
GAAGGAATGGCTTTACACGAGACCACAAACCATCAAGCACAATTCATTCC
TGTTTACATCATAAAATATCGGAAAGCCGTTCAAATGTTTCCTACATTTC
TCATCCAATCAAATGCAGGTTATGGATTCCAGCTCCCAAAACAGGCAAAT
GATTTGATACGAAGGTTACGGCAGACGAAAACCAAATCTAAAGACCAATC
TATTAAAGATGGTCTCTTTATAACAGAGATGGGTGATCTGAGCAAGCAGT
TTTTAATGCAACAACATTCGGATTGTAATAGTGAACATTGTCATAAGGGT
ATGAGGCACACCAGCACTGCAAATCTATCATCCGTTTGGGCGACAACGGT
CCACAGTGAAAAGAACCGGCACCGAAAATCATCACGTGACAGTCACGTGT
TTgacgaagatgaagaagaagattaTGATCAACTTTTACTCAAGGAAAAA
GAAATGTCAGATATCCaatatcaaaaaacaaaagCATATCTACAGATGAT
GAGTCACGAAAGCCAAGCTACTGATCAGACAGACATTACTTCATTAGATT
CAATCGGTGATACGGAGTCTTTATCACCTAACCATTTGAAAAAAACGTAT
CAGGAACACTGTGTGAGGGATGGGTACAAGAGAACTAGTAGGAGTAGTGA
TGAAGTTTTTTGTGATCAACAACATCGTCTGTTGCGTGGAGAAGATTGTA
GTTTTGATACCACGACACAGTGTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000958XLOC_000958Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001786-exon-sc0000012-1491911889:477915..478203TCONS_00001786-exon-sc0000012-1491911889:477915..478203Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1510915933:477915..478203TCONS_00001786-exon-sc0000012-1510915933:477915..478203Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1575043694:477915..478203TCONS_00001786-exon-sc0000012-1575043694:477915..478203Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1491911889:479715..479748TCONS_00001786-exon-sc0000012-1491911889:479715..479748Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1510915933:479715..479748TCONS_00001786-exon-sc0000012-1510915933:479715..479748Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1575043694:479715..479748TCONS_00001786-exon-sc0000012-1575043694:479715..479748Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1491911889:480201..480311TCONS_00001786-exon-sc0000012-1491911889:480201..480311Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1510915933:480201..480311TCONS_00001786-exon-sc0000012-1510915933:480201..480311Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1575043694:480201..480311TCONS_00001786-exon-sc0000012-1575043694:480201..480311Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1491911889:481588..481734TCONS_00001786-exon-sc0000012-1491911889:481588..481734Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1510915933:481588..481734TCONS_00001786-exon-sc0000012-1510915933:481588..481734Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1575043694:481588..481734TCONS_00001786-exon-sc0000012-1575043694:481588..481734Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1491911889:481965..482041TCONS_00001786-exon-sc0000012-1491911889:481965..482041Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1510915933:481965..482041TCONS_00001786-exon-sc0000012-1510915933:481965..482041Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1575043694:481965..482041TCONS_00001786-exon-sc0000012-1575043694:481965..482041Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1491911889:482595..482694TCONS_00001786-exon-sc0000012-1491911889:482595..482694Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1510915933:482595..482694TCONS_00001786-exon-sc0000012-1510915933:482595..482694Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1575043694:482595..482694TCONS_00001786-exon-sc0000012-1575043694:482595..482694Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1491911889:483122..483160TCONS_00001786-exon-sc0000012-1491911889:483122..483160Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1510915933:483122..483160TCONS_00001786-exon-sc0000012-1510915933:483122..483160Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1575043694:483122..483160TCONS_00001786-exon-sc0000012-1575043694:483122..483160Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1491911889:483621..483659TCONS_00001786-exon-sc0000012-1491911889:483621..483659Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1510915933:483621..483659TCONS_00001786-exon-sc0000012-1510915933:483621..483659Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1575043694:483621..483659TCONS_00001786-exon-sc0000012-1575043694:483621..483659Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1491911889:484078..484386TCONS_00001786-exon-sc0000012-1491911889:484078..484386Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1510915933:484078..484386TCONS_00001786-exon-sc0000012-1510915933:484078..484386Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1575043694:484078..484386TCONS_00001786-exon-sc0000012-1575043694:484078..484386Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1491911889:484637..484852TCONS_00001786-exon-sc0000012-1491911889:484637..484852Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1510915933:484637..484852TCONS_00001786-exon-sc0000012-1510915933:484637..484852Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1575043694:484637..484852TCONS_00001786-exon-sc0000012-1575043694:484637..484852Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1491911889:485068..485417TCONS_00001786-exon-sc0000012-1491911889:485068..485417Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1510915933:485068..485417TCONS_00001786-exon-sc0000012-1510915933:485068..485417Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1575043694:485068..485417TCONS_00001786-exon-sc0000012-1575043694:485068..485417Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1491911889:486176..487235TCONS_00001786-exon-sc0000012-1491911889:486176..487235Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1510915933:486176..487235TCONS_00001786-exon-sc0000012-1510915933:486176..487235Clytia hemisphaericaexon
TCONS_00001786-exon-sc0000012-1575043694:486176..487235TCONS_00001786-exon-sc0000012-1575043694:486176..487235Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001786-proteinTCONS_00001786-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:477915..487235 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.74679	5.27841	1.85013	0.631322	4.03441	2.42935	14.0647	11.6615	6.29557	4.33537	5.0502	4.34375	5.47778	8.036	3.68449	3.05391	1.21188	1.4252	5.8725	5.3983	0.826552	0.685707	4.60447	3.61675	0.802852	0.682635	0.19537	0.417007	2.65898	2.78738
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000157TIR_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001786 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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