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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001838 ID=TCONS_00001838|Name=TCONS_00001838|organism=Clytia hemisphaerica|type=transcript|length=3999bp
GCAACACTCGCCAAGCATGGTGATCAATTAAATAAACAACAGTTTGATTT
AGCTGGCCTCGATGCAAAGTTTGAACAACAAGCGAATAATTTAGCTGATA
ATAAAGAGTCTTTGCAAGACTTGACACAGAAAATAAACGAGAACGaaata
aaatttgtacaaacAATTGACCGCTTGGAAaaggaatttaattttatccA
AGCCATTCCTCAAGAGAAAAATGACCAATCGCTAGAACCAAGAGGTCTTT
GTTTGGCTGAGGTTCTCGAACACATCTTAACAAACATTGGTCCACAAGAA
GACGAATTACTTAAACGACTAGGATTGGAAAATGCGGAAGAAGATAATGT
TTATGAGCTCCTTAAATTTGTACCTTGGTCTCGTATCAAGTTTCATCTCG
AGCGACTCGAAAGATCAGACATCGTAGATTATATCACTGCAAATACACTT
ATTACCGAAGACATAAAACTTGCATCTACCAAACTCCGATGTAGATACTC
TGAAGAAGTCATCATATCCCTTGCTAACCAATCTTTGAGTGGAAGTCAAG
AGACATCGTATTACAACAGTAATGATATGTATACAGACTTAGCTGTCCTT
AAAGCAAACGTTGTCGACAGTGAAATTGACAACTCTGATCGAAAAGCGCT
CATGGAACAAAGATATTTCGACAAAGAGAGTATTGAACTCGATGATTTGT
TTCAGCAAAAGAATGACACTGTATTCGTACGTGGCGTTGGAGGTATGGGC
AAAACGACGATGCTCGAAATGTATAcgttaaaatgggcaaaaaaggAACT
TGAACTTGACCTTCCTCTAGAATTCATTTTCTTGTTTTCATGTCGAGAAC
TGAACCGATTGACTGGGCGTATTACATCAATTGAAGATTTGTTCACAGAA
AAGTATCCCGAAATATTCTCCATAGTTTCTTTGGAAAACCTTGCACAAAT
AGCTGATCGAGTCTTAATCATCATCGACGGTCTTGACGAAGTTCATggtg
tttatgaaacagaggtATCCAAAAACAGTCCATCTTTGACATCCATTCAA
ATATTATCAGAATTAATCAACACCCAAGGACCTCTTCTAAAAGGACATAA
ATGCATTGCTTGTGGTCGACCAAAAGCTTGTGATTTCATCAAgagaaaaa
tacatcaaatgGAAAGGCACTCAACGAAAGTGGCAACTAACATTAAAACT
GTTGAAGTTTGTGGTTTCAGTAAAGCTAATGTTgagaaatatattgaaaa
attcTTTGCAGGTAACACTGAAAAGGTGAATCGTGTTCGAGAAGCGATTA
AAACCTCAGAGAATTTACGTGTAATGGCATCTGTACCTGTATTCATTTGG
GTTATCGTGAATGTTTATAGCGAAGACCTGATCACGAAGCCACTGAACAC
GCATACAGAATTATACATGTACGCTTGTCTTGTGTTCCTAAGAAACCACA
TGCATGGTGTTGGGACGAAAGATTACaaaacattgattgaacttCTGGAA
GATAACACCATTTTTGAGGTTGTTTACTCGCTGATGACTCTTTCAGTGAA
AACTTACATGAACAACAAAGTTTTATTCACGGAACAGGATATCAAAAGTT
TGAACTGTCCTATTCATTTGGAGCAGACTGGCCTCATTGTTAAGTATAGT
CGTGGTGAAATACAAGAGCCGATATACCAGTTTAAGCACATTGTGCTTCA
AGAGTTCCTAACGGGACTTTTCTTTTGTGTGACTAAAGGGATTTCGCCCT
ACTTAACTAACCGTGAGTTGTCAAGTTGTTCACCTATTATCTTTGGTATT
CTTAGGTTGCTCGAAGAAAACGACAATAAGCTATTTGTTGAGTTCTTTAC
TCGCTTAACAGGGGTTCATCGAATGAAATCAAGCCTTTTTAAGAGGATCC
AAGGAACATTTCAAGCCCgaacatttcaaaaatttatctcTCGCAATACA
ATCGAATTTCCGAAATGCATGATCTATTTTGATTCATTAGTCATAGACAC
AACCATACCGGAATGTCAAGAATTCTTGACAGTTTTCTACGAagctaaat
tcaaaattgaatgtCCGTTTGCCACCGTTGAAATTTTTGGTTGTCCTATC
GGTATTGAAAAAAGgaatatagtttttcttatttggtatCTGAACCTTGA
ACTGAAACTGCCAAATTGCATGTGGAGCTGCTCTGGATTATCACTTACTA
CAAAACCCGAGTGTAATCACTTCATATCACTTTATTATGGAAATGGAGAC
AGAATCAAAGTACAAAACCATTTTCGAAAGCTGACAATAGATGAACCAAT
AAGTAATTTCAACAAAGAGGAAATCTTGTATctgattgaaaaattgaatc
taAAATCTTTAGAGATCCCGAGGTATATGTTTACAAGTTCTAGAGAGCGA
ACTGAACTAACTATAGATGCTAGGAATCTACAATGTTATCAATTCATTGA
ATTTGTTTGCGAAAATAAACTGAATGTTGAATGCGATGGGTTTAAAATGG
TTGAACTGCGAGGAAAGTTTAATGAAAAGAGCAGGAGAAATGCTTTCTTC
CTCATGGATCAACTTGAGCTTTCGTTGAAAATTCCAGAATCCATGATTTT
GAATGATACGTTAACAATGGATGATCGTGTGAATCACATCACATTTCTGG
ATGCTTTTCAACACGGAAGAAAAATAAGCACTCACGGTTTGCAGGGAGTC
ATTAAAGCACAGATCATGCCGTCTTTTGTTTCAAAACATCCTTTGGAGCC
GTATGCAGTACTGCTTCATCATTTGCAGATATTGGAAATCAAAGTTCCGC
CTAGTATGATATATAATCGGGACTCTGTAATCATTGATGCGGATTCTAAA
AAGTGTATGGCTTGCTTAAAGCTTTTTACATGTCTCGCTAAACTGACGGA
GAAGATTCGCACTATAAAAGAGAGTTTTCCAGAATTAAAGTACGCCAATG
TAAGGTTCGATAAAATTGGCGATTACGACAGCGTAGCTTGTTTCATTTCG
AAATGCGGACTTTTGATCAGGTTGCCACCAACAATGACTATAAGCAGTTG
TGTTTTCTTCAGCGATGGCGAGAGGTATAATTTTGATAACTTCTATAATC
TTTTGAAATATGATGGTATTCAATGTGCTTTGGGCGGGGTGACCCATTTT
TCCGTATTTGATACAGAATTTGAAGAATCGTGGCttcaaaaactaaaatt
tatcGTATCAAAATTAAGGCTGGATTTGGAATTACCACATAACTTTCTAA
AAGGAAAGGATGTTTGCATCAAATCAGACAGAGATcaaataagatttttc
aaaatcgcaAATATTCTACCCTCCACAATCGAACGACCATTCAATCCAAA
ATATGCAAGTATCTATTCACTACCACCTGATACCAGAGAAGTTTCTACAT
TTATCAAATATCATAATTTAACCGTTAAAATTCCAGACCAACTGCTGATG
GCAGACGGTATATTAAACCTCGATTTTAACTTACCTCTAACAACCCCTTT
CCTGAAGATGATTTATGAAGAAAATCTAAccttacaaaatgaaaatttga
atcacGTAAAAATAATTGGTGAAACCTCTATAGATGTTTTAAATGCTGTT
GTCAGTCTTATCACAAacttaaaattgaatattttggcGCCCGAAAAGCA
ATTCAATGATTATGGATTATTCACAATTGATATTACTGTACCAGAAAGTT
TTAACTTCATTTATGTTGTACCACGTATTCAGCAAAATGTTGACCATTTG
CATTTCTATGTAAAACATTTTTGTTCTGAAgatgaaattgttgaagaatt
tTTGCAACATATCTGTTACAGTTGTTATTatgaataattttatttttaag
atgaTGCTCTTATATGTGttacaatcggcgccgaaatatattggcacttt
tgggtattttaacgtttttcagaatttaaagatcgggcgagaattgcact
ttcagtacttccactttgtttcattggatttttttacttgacaggggtt Run BLAST on NCBI protein sequence of TCONS_00001838-protein >TCONS_00001838-protein ID=TCONS_00001838-protein|Name=TCONS_00001838-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1278bp
ATLAKHGDQLNKQQFDLAGLDAKFEQQANNLADNKESLQDLTQKINENEI
KFVQTIDRLEKEFNFIQAIPQEKNDQSLEPRGLCLAEVLEHILTNIGPQE
DELLKRLGLENAEEDNVYELLKFVPWSRIKFHLERLERSDIVDYITANTL
ITEDIKLASTKLRCRYSEEVIISLANQSLSGSQETSYYNSNDMYTDLAVL
KANVVDSEIDNSDRKALMEQRYFDKESIELDDLFQQKNDTVFVRGVGGMG
KTTMLEMYTLKWAKKELELDLPLEFIFLFSCRELNRLTGRITSIEDLFTE
KYPEIFSIVSLENLAQIADRVLIIIDGLDEVHGVYETEVSKNSPSLTSIQ
ILSELINTQGPLLKGHKCIACGRPKACDFIKRKIHQMERHSTKVATNIKT
VEVCGFSKANVEKYIEKFFAGNTEKVNRVREAIKTSENLRVMASVPVFIW
VIVNVYSEDLITKPLNTHTELYMYACLVFLRNHMHGVGTKDYKTLIELLE
DNTIFEVVYSLMTLSVKTYMNNKVLFTEQDIKSLNCPIHLEQTGLIVKYS
RGEIQEPIYQFKHIVLQEFLTGLFFCVTKGISPYLTNRELSSCSPIIFGI
LRLLEENDNKLFVEFFTRLTGVHRMKSSLFKRIQGTFQARTFQKFISRNT
IEFPKCMIYFDSLVIDTTIPECQEFLTVFYEAKFKIECPFATVEIFGCPI
GIEKRNIVFLIWYLNLELKLPNCMWSCSGLSLTTKPECNHFISLYYGNGD
RIKVQNHFRKLTIDEPISNFNKEEILYLIEKLNLKSLEIPRYMFTSSRER
TELTIDARNLQCYQFIEFVCENKLNVECDGFKMVELRGKFNEKSRRNAFF
LMDQLELSLKIPESMILNDTLTMDDRVNHITFLDAFQHGRKISTHGLQGV
IKAQIMPSFVSKHPLEPYAVLLHHLQILEIKVPPSMIYNRDSVIIDADSK
KCMACLKLFTCLAKLTEKIRTIKESFPELKYANVRFDKIGDYDSVACFIS
KCGLLIRLPPTMTISSCVFFSDGERYNFDNFYNLLKYDGIQCALGGVTHF
SVFDTEFEESWLQKLKFIVSKLRLDLELPHNFLKGKDVCIKSDRDQIRFF
KIANILPSTIERPFNPKYASIYSLPPDTREVSTFIKYHNLTVKIPDQLLM
ADGILNLDFNLPLTTPFLKMIYEENLTLQNENLNHVKIIGETSIDVLNAV
VSLITNLKLNILAPEKQFNDYGLFTIDITVPESFNFIYVVPRIQQNVDHL
HFYVKHFCSEDEIVEEFLQHICYSCYYE Run BLAST on NCBI transcript from alignment at sc0000012:812338..818336+ Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001838 ID=TCONS_00001838|Name=TCONS_00001838|organism=Clytia hemisphaerica|type=transcript|length=5999bp|location=Sequence derived from alignment at sc0000012:812338..818336+ (Clytia hemisphaerica)
GCAACACTCGCCAAGCATGGTGATCAATTAAATAAACAACAGTTTGATTT
AGCTGGCCTCGATGCAAAGTTTGAACAACAAGCGAATAATTTAGCTGATA
ATAAAGAGTCTTTGCAAGACTTGACACAGAAAATAAACGAGAACGaaata
aaatttgtacaaacAATTGACCGCTTGGAAaaggaatttaattttatccA
AGCCATTCCTCAAGAGAAAAATGACCAATCGCTAGGTATGTTCAAGTTGA
ATTTTATCAATATGATAGATACAGTATGGAATATAACTTAACAGCAGCTC
TTAGACTCGGCCCGCAAATATTGTTAAAATTACTCAACCCTTAGACAATC
ATGGTGTACTTATAATAATAGTGTGATGGCTTGACTAGCGACTGGCACTA
AAATTAGTCCAAAAGAAGGGTTCATTTCACAGGATCCTCAGTAAGCAGGT
TAGCTTTGGGGTCGAACTCATAACCTTACGCACCGTAGCTGAATGATTTA
CCTTCATGCTACGACCGCAGATTAGTTATCTCAACAACACGAGTTTCAAC
TTAAATGCTTGCGTTGCTTTTAAATTTAAGACTTTGAGTTCTCAACAGTC
TCAAAAAGCTTTCATGAAAGACTTTTTTTAGAGCCACAGTTAACGTTTGA
AGTAGTTTTATAGAGAGAAAACGGCAAGAAAATGCCAACTTTAAAAACAG
TATCCCGTAGAGCGTATCCGTAGAGTAGTATCCTTTCATTCATTACATTT
GTTCAAAGACCACATACCCGATTCATTTTGGTCATCTACTCATGTTATTT
ATCTTAGAACCAAGAGGTCTTTGTTTGGCTGAGGTTCTCGAACACATCTT
AACAAACATTGGTCCACAAGAAGACGAATTACTTAAACGACTAGGATTGG
AAAATGCGGAAGAAGATAATGTTTATGAGCTCCTTAAATTTGTACCTTGG
TCTCGTATCAAGTTTCATCTCGAGCGACTCGAAAGATCAGACATCGTAGA
TTATATCACTGCAAATACACTTATTACCGAAGGTACAGGTTCTTAATCTT
CCATATTTAAATTTTCCCCTATATCTTCCGAATTTATGATCAAATTAGAA
CTAGTACCTAGCTAAATTTCTCAAATACCTACTCATATTTTTTATCCAAT
TTTCAGTTTTTCAAGCCGGGTACGTAAAAACAATGAATGCCTTATGCTTC
AAGATTCCATGAATAGCTGGTTCGGTTATTTACAGTTTACACTCTCTGAT
TCGCAAAAAGTCACCATCAACAAGAAACTCTCCTAAACAACGCTTCGCTG
TTCAATACGCTCCCTTATTCGATGAAATAATTAGAGAGTATCAATGAATC
GGACATTGGGAGGAGTGGGGATTTGTACCAAAGGCCCAAGTTTGTAGTGT
TGCCCCGGGGGGGGGGGGTTCTAGGGCAAAATGGGTTATGGGGATGCGCC
GCTGGTCAGCGTACCTTTTTTATCCTCCACCAGTCCCAGGTAGGGTCGCA
AAAATACTAAAATAGAAAAATCAGTCCCTCGTAGGGTGCCTTTTTTGGAA
AATTTGGGGAAAAAGTAGAAAATTTCATCTCATCATCATCATCATCAAAA
TTTTGGAATTTTAGTCCCATTCAGGGTCACTTTTTTCGCAAATTTCGAGT
CCCCCGTCGGTCGGCAAGGGTAGTCCCCCCCCCCCCGCCAGGTAGTGCTG
ACGCCTTAGACCACTAAATCGTTTCTCCTACCTTGTCTTTTCTGTCTTTG
TAGACATAAAACTTGCATCTACCAAACTCCGATGTAGATACTCTGAAGAA
GTCATCATATCCCTTGCTAACCAATCTTTGAGTGGAAGTCAAGAGACATC
GTATTACAACAGTAATGATATGTATACAGACTTAGCTGTCCTTAAAGCAA
ACGTTGTCGACAGTGAAATTGACAACTCTGATCGAAAAGCGCTCATGGAA
CAAAGATATTTCGACAAAGAGAGTATTGAACTCGATGATTTGTTTCAGCA
AAAGAATGACACTGTATTCGTACGTGGCGTTGGAGGTATTTTTATTCTTC
TAGCTTTTTGTTCAAGAGTTACAGTCTTAGGAGGCTGTCGGTTGAATACC
CGGCGGGAGGTggcactcatatggtctgaCCCACGTGCAGCCCTAGGTTT
TTCGAGAGCCtctaaatgcactgtaagggtgtacttttgaaaGAGCGCAC
TATAAGGGTTTTCTTTTAGCcggatacactgtaagggtgtgtttggggac
tactgaattgcaagtctgacagtaaaaatctgacaAAGTTTTAACCCGcg
cccattttgatttgttttacacattgtgtcgacatctctGGCTCACTTTT
AGGTGCCTTTAGcaaataagatatgaaatcaaactataCTGTCAAACATG
CTGTCGTTTAAAATCGAGCCCCCTCCCCGGGGtgaatggtgttttttttt
cggatgatttttttcagataattttcaggCACGGTCCAATGTTTGTGGTA
AACTCTCATTCTGTGGGGACCACTGTATAGAAGTACCATCACTTTAAATT
TCggaaaattgtttgtttgattTCAACGAGACTTCAcacccaaaataaaa
aaatgttgtcACTCTCGACTTAATTCAGGTGGGGTCAAAAATAAGACGGC
GCCGGTCGTGGCATTTAGACCTACCGGGAATTATCTTATAAGATGCCAAT
GGCTCTTGATAGGTTAAcataatttgtatttttttgtcttAGGTATGGGC
AAAACGACGATGCTCGAAATGTATAcgttaaaatgggcaaaaaaggAACT
TGAACTTGACCTTCCTCTAGAATTCATTTTCTTGTTTTCATGTCGAGAAC
TGAACCGATTGACTGGGCGTATTACATCAATTGAAGATTTGTTCACAGAA
AAGTATCCCGAAATATTCTCCATAGTTTCTTTGGAAAACCTTGCACAAAT
AGCTGATCGAGTCTTAATCATCATCGACGGTCTTGACGAAGTTCATggtg
tttatgaaacagaggtATCCAAAAACAGTCCATCTTTGACATCCATTCAA
ATATTATCAGAATTAATCAACACCCAAGGACCTCTTCTAAAAGGACATAA
ATGCATTGCTTGTGGTCGACCAAAAGCTTGTGATTTCATCAAgagaaaaa
tacatcaaatgGAAAGGCACTCAACGAAAGTGGCAACTAACATTAAAACT
GTTGAAGTTTGTGGTTTCAGTAAAGCTAATGTTgagaaatatattgaaaa
attcTTTGCAGGTAACACTGAAAAGGTGAATCGTGTTCGAGAAGCGATTA
AAACCTCAGAGAATTTACGTGTAATGGCATCTGTACCTGTATTCATTTGG
GTTATCGTGAATGTTTATAGCGAAGACCTGATCACGAAGCCACTGAACAC
GCATACAGAATTATACATGTACGCTTGTCTTGTGTTCCTAAGAAACCACA
TGCATGGTGTTGGGACGAAAGATTACaaaacattgattgaacttCTGGAA
GATAACACCATTTTTGAGGTTGTTTACTCGCTGATGACTCTTTCAGTGAA
AACTTACATGAACAACAAAGTTTTATTCACGGAACAGGATATCAAAAGTT
TGAACTGTCCTATTCATTTGGAGCAGACTGGCCTCATTGTTAAGTATAGT
CGTGGTGAAATACAAGAGCCGATATACCAGTTTAAGCACATTGTGCTTCA
AGAGTTCCTAACGGGACTTTTCTTTTGTGTGACTAAAGGGATTTCGCCCT
ACTTAACTAACCGTGAGTTGTCAAGTTGTTCACCTATTATCTTTGGTATT
CTTAGGTTGCTCGAAGAAAACGACAATAAGCTATTTGTTGAGTTCTTTAC
TCGCTTAACAGGGGTTCATCGAATGAAATCAAGCCTTTTTAAGAGGATCC
AAGGAACATTTCAAGCCCgaacatttcaaaaatttatctcTCGCAATACA
ATCGAATTTCCGAAATGCATGATCTATTTTGATTCATTAGTCATAGACAC
AACCATACCGGAATGTCAAGAATTCTTGACAGTTTTCTACGAagctaaat
tcaaaattgaatgtCCGTTTGCCACCGTTGAAATTTTTGGTTGTCCTATC
GGTATTGAAAAAAGgaatatagtttttcttatttggtatCTGAACCTTGA
ACTGAAACTGCCAAATTGCATGTGGAGCTGCTCTGGATTATCACTTACTA
CAAAACCCGAGTGTAATCACTTCATATCACTTTATTATGGAAATGGAGAC
AGAATCAAAGTACAAAACCATTTTCGAAAGCTGACAATAGATGAACCAAT
AAGTAATTTCAACAAAGAGGAAATCTTGTATctgattgaaaaattgaatc
taAAATCTTTAGAGATCCCGAGGTATATGTTTACAAGTTCTAGAGAGCGA
ACTGAACTAACTATAGATGCTAGGAATCTACAATGTTATCAATTCATTGA
ATTTGTTTGCGAAAATAAACTGAATGTTGAATGCGATGGGTTTAAAATGG
TTGAACTGCGAGGAAAGTTTAATGAAAAGAGCAGGAGAAATGCTTTCTTC
CTCATGGATCAACTTGAGCTTTCGTTGAAAATTCCAGAATCCATGATTTT
GAATGATACGTTAACAATGGATGATCGTGTGAATCACATCACATTTCTGG
ATGCTTTTCAACACGGAAGAAAAATAAGCACTCACGGTTTGCAGGGAGTC
ATTAAAGCACAGATCATGCCGTCTTTTGTTTCAAAACATCCTTTGGAGCC
GTATGCAGTACTGCTTCATCATTTGCAGATATTGGAAATCAAAGTTCCGC
CTAGTATGATATATAATCGGGACTCTGTAATCATTGATGCGGATTCTAAA
AAGTGTATGGCTTGCTTAAAGCTTTTTACATGTCTCGCTAAACTGACGGA
GAAGATTCGCACTATAAAAGAGAGTTTTCCAGAATTAAAGTACGCCAATG
TAAGGTTCGATAAAATTGGCGATTACGACAGCGTAGCTTGTTTCATTTCG
AAATGCGGACTTTTGATCAGGTTGCCACCAACAATGACTATAAGCAGTTG
TGTTTTCTTCAGCGATGGCGAGAGGTATAATTTTGATAACTTCTATAATC
TTTTGAAATATGATGGTATTCAATGTGCTTTGGGCGGGGTGACCCATTTT
TCCGTATTTGATACAGAATTTGAAGAATCGTGGCttcaaaaactaaaatt
tatcGTATCAAAATTAAGGCTGGATTTGGAATTACCACATAACTTTCTAA
AAGGAAAGGATGTTTGCATCAAATCAGACAGAGATcaaataagatttttc
aaaatcgcaAATATTCTACCCTCCACAATCGAACGACCATTCAATCCAAA
ATATGCAAGTATCTATTCACTACCACCTGATACCAGAGAAGTTTCTACAT
TTATCAAATATCATAATTTAACCGTTAAAATTCCAGACCAACTGCTGATG
GCAGACGGTATATTAAACCTCGATTTTAACTTACCTCTAACAACCCCTTT
CCTGAAGATGATTTATGAAGAAAATCTAAccttacaaaatgaaaatttga
atcacGTAAAAATAATTGGTGAAACCTCTATAGATGTTTTAAATGCTGTT
GTCAGTCTTATCACAAacttaaaattgaatattttggcGCCCGAAAAGCA
ATTCAATGATTATGGATTATTCACAATTGATATTACTGTACCAGAAAGTT
TTAACTTCATTTATGTTGTACCACGTATTCAGCAAAATGTTGACCATTTG
CATTTCTATGTAAAACATTTTTGTTCTGAAgatgaaattgttgaagaatt
tTTGCAACATATCTGTTACAGTTGTTATTatgaataattttatttttaag
atgaTGCTCTTATATGTGttacaatcggcgccgaaatatattggcacttt
tgggtattttaacgtttttcagaatttaaagatcgggcgagaattgcact
ttcagtacttccactttgtttcattggatttttttacttgacaggggtt Coding sequence (CDS) from alignment at sc0000012:812338..818336+ >TCONS_00001838 ID=TCONS_00001838|Name=TCONS_00001838|organism=Clytia hemisphaerica|type=CDS|length=3837bp|location=Sequence derived from alignment at sc0000012:812338..818336+ (Clytia hemisphaerica)
GCAACACTCGCCAAGCATGGTGATCAATTAAATAAACAACAGTTTGATTT
AGCTGGCCTCGATGCAAAGTTTGAACAACAAGCGAATAATTTAGCTGATA
ATAAAGAGTCTTTGCAAGACTTGACACAGAAAATAAACGAGAACGaaata
aaatttgtacaaacAATTGACCGCTTGGAAaaggaatttaattttatccA
AGCCATTCCTCAAGAGAAAAATGACCAATCGCTAGAACCAAGAGGTCTTT
GTTTGGCTGAGGTTCTCGAACACATCTTAACAAACATTGGTCCACAAGAA
GACGAATTACTTAAACGACTAGGATTGGAAAATGCGGAAGAAGATAATGT
TTATGAGCTCCTTAAATTTGTACCTTGGTCTCGTATCAAGTTTCATCTCG
AGCGACTCGAAAGATCAGACATCGTAGATTATATCACTGCAAATACACTT
ATTACCGAAGACATAAAACTTGCATCTACCAAACTCCGATGTAGATACTC
TGAAGAAGTCATCATATCCCTTGCTAACCAATCTTTGAGTGGAAGTCAAG
AGACATCGTATTACAACAGTAATGATATGTATACAGACTTAGCTGTCCTT
AAAGCAAACGTTGTCGACAGTGAAATTGACAACTCTGATCGAAAAGCGCT
CATGGAACAAAGATATTTCGACAAAGAGAGTATTGAACTCGATGATTTGT
TTCAGCAAAAGAATGACACTGTATTCGTACGTGGCGTTGGAGGTATGGGC
AAAACGACGATGCTCGAAATGTATAcgttaaaatgggcaaaaaaggAACT
TGAACTTGACCTTCCTCTAGAATTCATTTTCTTGTTTTCATGTCGAGAAC
TGAACCGATTGACTGGGCGTATTACATCAATTGAAGATTTGTTCACAGAA
AAGTATCCCGAAATATTCTCCATAGTTTCTTTGGAAAACCTTGCACAAAT
AGCTGATCGAGTCTTAATCATCATCGACGGTCTTGACGAAGTTCATggtg
tttatgaaacagaggtATCCAAAAACAGTCCATCTTTGACATCCATTCAA
ATATTATCAGAATTAATCAACACCCAAGGACCTCTTCTAAAAGGACATAA
ATGCATTGCTTGTGGTCGACCAAAAGCTTGTGATTTCATCAAgagaaaaa
tacatcaaatgGAAAGGCACTCAACGAAAGTGGCAACTAACATTAAAACT
GTTGAAGTTTGTGGTTTCAGTAAAGCTAATGTTgagaaatatattgaaaa
attcTTTGCAGGTAACACTGAAAAGGTGAATCGTGTTCGAGAAGCGATTA
AAACCTCAGAGAATTTACGTGTAATGGCATCTGTACCTGTATTCATTTGG
GTTATCGTGAATGTTTATAGCGAAGACCTGATCACGAAGCCACTGAACAC
GCATACAGAATTATACATGTACGCTTGTCTTGTGTTCCTAAGAAACCACA
TGCATGGTGTTGGGACGAAAGATTACaaaacattgattgaacttCTGGAA
GATAACACCATTTTTGAGGTTGTTTACTCGCTGATGACTCTTTCAGTGAA
AACTTACATGAACAACAAAGTTTTATTCACGGAACAGGATATCAAAAGTT
TGAACTGTCCTATTCATTTGGAGCAGACTGGCCTCATTGTTAAGTATAGT
CGTGGTGAAATACAAGAGCCGATATACCAGTTTAAGCACATTGTGCTTCA
AGAGTTCCTAACGGGACTTTTCTTTTGTGTGACTAAAGGGATTTCGCCCT
ACTTAACTAACCGTGAGTTGTCAAGTTGTTCACCTATTATCTTTGGTATT
CTTAGGTTGCTCGAAGAAAACGACAATAAGCTATTTGTTGAGTTCTTTAC
TCGCTTAACAGGGGTTCATCGAATGAAATCAAGCCTTTTTAAGAGGATCC
AAGGAACATTTCAAGCCCgaacatttcaaaaatttatctcTCGCAATACA
ATCGAATTTCCGAAATGCATGATCTATTTTGATTCATTAGTCATAGACAC
AACCATACCGGAATGTCAAGAATTCTTGACAGTTTTCTACGAagctaaat
tcaaaattgaatgtCCGTTTGCCACCGTTGAAATTTTTGGTTGTCCTATC
GGTATTGAAAAAAGgaatatagtttttcttatttggtatCTGAACCTTGA
ACTGAAACTGCCAAATTGCATGTGGAGCTGCTCTGGATTATCACTTACTA
CAAAACCCGAGTGTAATCACTTCATATCACTTTATTATGGAAATGGAGAC
AGAATCAAAGTACAAAACCATTTTCGAAAGCTGACAATAGATGAACCAAT
AAGTAATTTCAACAAAGAGGAAATCTTGTATctgattgaaaaattgaatc
taAAATCTTTAGAGATCCCGAGGTATATGTTTACAAGTTCTAGAGAGCGA
ACTGAACTAACTATAGATGCTAGGAATCTACAATGTTATCAATTCATTGA
ATTTGTTTGCGAAAATAAACTGAATGTTGAATGCGATGGGTTTAAAATGG
TTGAACTGCGAGGAAAGTTTAATGAAAAGAGCAGGAGAAATGCTTTCTTC
CTCATGGATCAACTTGAGCTTTCGTTGAAAATTCCAGAATCCATGATTTT
GAATGATACGTTAACAATGGATGATCGTGTGAATCACATCACATTTCTGG
ATGCTTTTCAACACGGAAGAAAAATAAGCACTCACGGTTTGCAGGGAGTC
ATTAAAGCACAGATCATGCCGTCTTTTGTTTCAAAACATCCTTTGGAGCC
GTATGCAGTACTGCTTCATCATTTGCAGATATTGGAAATCAAAGTTCCGC
CTAGTATGATATATAATCGGGACTCTGTAATCATTGATGCGGATTCTAAA
AAGTGTATGGCTTGCTTAAAGCTTTTTACATGTCTCGCTAAACTGACGGA
GAAGATTCGCACTATAAAAGAGAGTTTTCCAGAATTAAAGTACGCCAATG
TAAGGTTCGATAAAATTGGCGATTACGACAGCGTAGCTTGTTTCATTTCG
AAATGCGGACTTTTGATCAGGTTGCCACCAACAATGACTATAAGCAGTTG
TGTTTTCTTCAGCGATGGCGAGAGGTATAATTTTGATAACTTCTATAATC
TTTTGAAATATGATGGTATTCAATGTGCTTTGGGCGGGGTGACCCATTTT
TCCGTATTTGATACAGAATTTGAAGAATCGTGGCttcaaaaactaaaatt
tatcGTATCAAAATTAAGGCTGGATTTGGAATTACCACATAACTTTCTAA
AAGGAAAGGATGTTTGCATCAAATCAGACAGAGATcaaataagatttttc
aaaatcgcaAATATTCTACCCTCCACAATCGAACGACCATTCAATCCAAA
ATATGCAAGTATCTATTCACTACCACCTGATACCAGAGAAGTTTCTACAT
TTATCAAATATCATAATTTAACCGTTAAAATTCCAGACCAACTGCTGATG
GCAGACGGTATATTAAACCTCGATTTTAACTTACCTCTAACAACCCCTTT
CCTGAAGATGATTTATGAAGAAAATCTAAccttacaaaatgaaaatttga
atcacGTAAAAATAATTGGTGAAACCTCTATAGATGTTTTAAATGCTGTT
GTCAGTCTTATCACAAacttaaaattgaatattttggcGCCCGAAAAGCA
ATTCAATGATTATGGATTATTCACAATTGATATTACTGTACCAGAAAGTT
TTAACTTCATTTATGTTGTACCACGTATTCAGCAAAATGTTGACCATTTG
CATTTCTATGTAAAACATTTTTGTTCTGAAgatgaaattgttgaagaatt
tTTGCAACATATCTGTTACAGTTGTTATTatgaataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001838-exon-sc0000012-1491911889:812338..812572 | TCONS_00001838-exon-sc0000012-1491911889:812338..812572 | Clytia hemisphaerica | exon |
| TCONS_00001838-exon-sc0000012-1510915933:812338..812572 | TCONS_00001838-exon-sc0000012-1510915933:812338..812572 | Clytia hemisphaerica | exon |
| TCONS_00001838-exon-sc0000012-1575043694:812338..812572 | TCONS_00001838-exon-sc0000012-1575043694:812338..812572 | Clytia hemisphaerica | exon |
| TCONS_00001838-exon-sc0000012-1491911889:813145..813369 | TCONS_00001838-exon-sc0000012-1491911889:813145..813369 | Clytia hemisphaerica | exon |
| TCONS_00001838-exon-sc0000012-1510915933:813145..813369 | TCONS_00001838-exon-sc0000012-1510915933:813145..813369 | Clytia hemisphaerica | exon |
| TCONS_00001838-exon-sc0000012-1575043694:813145..813369 | TCONS_00001838-exon-sc0000012-1575043694:813145..813369 | Clytia hemisphaerica | exon |
| TCONS_00001838-exon-sc0000012-1491911889:814091..814372 | TCONS_00001838-exon-sc0000012-1491911889:814091..814372 | Clytia hemisphaerica | exon |
| TCONS_00001838-exon-sc0000012-1510915933:814091..814372 | TCONS_00001838-exon-sc0000012-1510915933:814091..814372 | Clytia hemisphaerica | exon |
| TCONS_00001838-exon-sc0000012-1575043694:814091..814372 | TCONS_00001838-exon-sc0000012-1575043694:814091..814372 | Clytia hemisphaerica | exon |
| TCONS_00001838-exon-sc0000012-1491911889:815080..818336 | TCONS_00001838-exon-sc0000012-1491911889:815080..818336 | Clytia hemisphaerica | exon |
| TCONS_00001838-exon-sc0000012-1510915933:815080..818336 | TCONS_00001838-exon-sc0000012-1510915933:815080..818336 | Clytia hemisphaerica | exon |
| TCONS_00001838-exon-sc0000012-1575043694:815080..818336 | TCONS_00001838-exon-sc0000012-1575043694:815080..818336 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000012 | supercontig | sc0000012:812338..818336 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00001838 vs. Swiss-Prot (Human)
Match: NAL12 (NACHT, LRR and PYD domains-containing protein 12 OS=Homo sapiens GN=NLRP12 PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 1.802e-18 Identity = 85/349 (24.36%), Postives = 153/349 (43.84%), Query Frame = 1
Query: 718 TVFVRGVGGMGKTTMLEMYTLKWAKKELELDLPLEFIFLFSCRELNRLTGRITSIEDLFTEKYPEIFSIVSLENLAQIADRVLIIIDGLDEVHGVYETEVSKNSPSLTSIQILSELINT--QGPLLKGHKCIACGRPKACDFIKRKIHQMERHSTKVATNIKTVEVCGFSKANVEKYIEKFFAGNTEKVNRVREAIKTSENLRVMASVPVFIWVIVNVYSE-----DLITKPLNTHTELYMYACLVFLRNHMHGVGTKDYKTLIELLEDNTIFEVVYSLMTLSVKTYMNNKVLFTEQDIKSLNCPIHLEQTGLIVKYSRGEIQ-EPIYQFKHIVLQEFLTGLFFCVTKG 1740
TV ++G G+GK+ + L WA +L +++F +CRE+N+ + S++DL +PE L+ L ++ +R+L IIDG DE+ + + L+N+ + LL + RP A + K+H++ H + VE+ GFS+A ++Y K+F N E+ +V ++ +E L M VP+ WV+ + L+ + T T +YM L ++ K ++ + L +L+ N K+LF EQD++ L + + +I E Y F H+ QEF +++ + +G
Sbjct: 212 TVVMQGAAGIGKSMLAHKVMLDWADGKL-FQGRFDYLFYINCREMNQ-SATECSMQDLIFSCWPE--PSAPLQELIRVPERLLFIIDGFDELKPSFHDPQGPWCLCWEEKRPTELLLNSLIRKKLLPELSLLITTRPTALE----KLHRLLEHP-------RHVEILGFSEAERKEYFYKYFH-NAEQAGQVFNYVRDNEPLFTMCFVPLVCWVVCTCLQQQLEGGGLLRQTSRTTTAVYMLYLLSLMQ-------PKPGAPRLQPPPNQR------GLCSLAADGLWNQKILFEEQDLRKHGLDGEDVSAFLNMNIFQKDINCERYYSFIHLSFQEFFAAMYYILDEG 531
The following BLAST results are available for this feature:
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