TCONS_00001968 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001968
Unique NameTCONS_00001968
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3481

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001968 ID=TCONS_00001968|Name=TCONS_00001968|organism=Clytia hemisphaerica|type=transcript|length=3481bp
tttgaaaaaaaaatctgttcCCGCCAGCCAGATGTTCAAATTGTTAGAAC
GTTCGAATATAGAGTGCTTCTCTGCGGAAAAACAAATAAACTTTGATAAT
AATGcttcaaataagaaaaaaagaagattttgttGTCAAACTGATTGTTC
AATGCCAGTTTAGTATGCTTCATTGATTTTGAACAATCGAATTCGTAAAT
AAATGCGACGCACCTTTAGTTTTGTCTATGCGCTTGAATAACTTTAATTT
CTTCGGGGAGATCGGAATTTCGGCAAACGAAAAAAACACCCCTCGACTCA
AAATATATCCAGTACCTCTTTAGATCGGCATAATGAAAATTATCGCCATC
TGTGTGTTCACCCTTTTGGNCCAGTACCTCTTTAGATCGGCATAATGAAA
ATTATCGCCATCTGTGTGTTCACCCTTTTGGTGGCATGCCACGCCAAATA
CATCGAAAAAGTAAAACGTGCTGATTCCGATGATCCTGTATTCGGCACTG
ATGGAAAACTTGCTGAAATCACCGTCAAGAAAATGTTGTCAGAAACAAAC
AGATATCGTTTGATGCATGATGCCACGCCCTTGGGTTACTGCCCCGTATG
TGCTGACGCAGCACAAAAACACGCAGATGATATTGCCAACACCGGCGTCG
TCAAACCAGACGGCAAAGCCAAATATGGTCAAATCATTTTCTCTACATCT
GATGCTAATGATGTCAAAAATGGAAATTATTTTGGAACCTTGGTCCCAGC
TAAGATCTATGATCAAATCAAGAATTACGATTACGTCAAAAGTGAATTCA
AAGACAATGCTGCCGATTTCTCTCAATTGATCTGGGAAGGTAGTGAAGTT
GCCGGATTCGCCGGTAAAAAAGCTACAGATGGTACAGTGTACGTTGTTAT
GTACTTCAACCCACCTGGTAATAACGAGACAATGTCTTTCTATGAGAATG
TCAACCGTGTTACCGGTGCAGGTGATGCTGAATGCGGACACGtGAAATGT
GACGACGGTTGGACTTTACATGGATGCAGTTGTTTCAAATTCTTTGAAGA
TGAATTATCATGGCCAGATGCAGTTGATCATTGTAACATCCTCAAAGCTT
CATTAGCTTCAGCTGAATCTATGGAAGAAGGAACTTTATTGAGAACCATG
ATGATGGAAAAAGAGAAACAAGCTTGGGTCGGTATGTCCGATACTGCTAA
CAAAGGTGGATTCCAATTCGTTGATGGTACACCATACGTTTATTCTGATT
GGAGTTTTGAATCTTACGAATGGTTGTACGCACATCCCAACGATGCACGA
TCCAAATGTATCACTTCTTCCAAAGATGGATGGAACTACAAAGAATGCTC
CGATAAATTACCGTCCATTTGCCGATCCCGACCAAACGGTGTCATGAGCT
TTGCTTTGGATCTGTATTTCCCAGGATCTCAATTCACCAATGAGTTGGCT
ATGCCAGGAACTCAACGATACAACACCATGAAAAATACAATCGACAAAGC
TtTCAACGATTCATACGGAGGTGATATCTGGTATGTTGGAAGCACTTTCT
ACCAATTCATGCCACGAGACAATGGAGAAGTTGCTGCATCAACCATGTTG
AGATTTGCACCAGACATCCGTGCTCCAGTTGACCCAATCACCAAATTGAG
AGACATCTTACGTAAACAAACTGACGTCAAAATTTTGGCTGTCCGTCTCA
TCCCAGGTGTTGGACGTGTTTCTGCTGTCTCCGTGACCGGCGGAACTTGC
CCATCTGGTTGTTCCGGTGATTGTTATCCAGAATGTAACCCAGTATGCTG
TGGTGCCGCTGTTTCTCTCAGTGCACCTGCTATTCCTTCCGGATTCACAG
CCTGTCCACAATTCCCAGGATGTGGAACTCCATGTCAATCAAGCTGCTCT
CAAAGCTGTTGTCAACAAAACCCTTACCAAGCTGCCCAAATGATGGCTCC
ACCTATGCCAATGGCCGGCGGATGCCCACAGTTCCCTGGATGTGCTGCCC
AATGTGCCCCACGTTGCCAAGCATCATGTTGCCAACAACAACAAGGAATG
ATGATGCCACCAATGATGGCCGCTCCAATGCAAAGTGCTTGCCCACAATT
CCCCGGTTGCGGTGCCCAATGTGCACCACGTTGTCAAGCATCTTGTTGTC
AACAACAACAAGGAATGATGATGCCACCACCAATGATGGCCGCCCCAATG
ATGCCCATGCAAAGCGCGTGTCCTCAATCCCCAAGCTGTGCCGCCCAATG
TGCACCACGTTGTCAAGCTTCTTGTTGTCAACAAAACCAAATGCCAGCCC
CAATGATGCCCATGCCAATGGCTGGTGGTTGTCCAATGATGCCTGGATGT
TCAGCATCATGTGCTCCACAATGCTCACAACAATGTTGCCAACAGAATCA
ACAAGCTCAAATTCCACAACAACAACTCGTCATCCAACAAGCTCCAGTCG
TATTACAACCTCTCGGTATGGGAAGTTGTCCAATCTTCCCAGGATGTTCA
CAAGCCTGTGCACCAGCCTGTCGCGCTAGCTGCTGCACCAATGGTATGAT
GGCTCGAACCATGGGAAAGAAACGTAGCAAAGTTTCACATCACAAACTTC
ACAAGAAAAgcaaattgttcaaaaaatctgAATAATTTCCATTCCTGATA
GACACGCCAACAAACTTTCTttgttcaaaagttttttaaattaaacTATT
GAAATAAAGACTGTGTTGTGTTTATAAGACTGTTTACAATATCACAGACC
GTTAAATAAATGAGCAGCGAATAAAAGACAATATTGTAATATAAATAAGA
CCTTGCATTACGAAAATAATGCTCAGAGATTTTGAGACGAGTGTTAGCAC
TGACGATTTTATCCAGTGAGAANTATTGTAATATAAATAAGACCTTGCAT
TACGAAAATAATGCTCAGAGATTTTGAGACGAGTGTTAGCACTGACGATT
TTATCCAGTGAGAAAGGAGATAGAGCTATTCCACttgtaaaatgttttta
tatttttttactcagaattttaaagaaaaacgttTATTTTGAATATGGTT
ATTATATAAGTAGATTTCTATTCAGTATCATTTTTGACGTGATCTTACTT
CTTCGACAGTCCTCCTCATTTAAAAATAAGTATGTAGTCATGTAAAAGTA
ATCTTAAAATTGACTTGAAACCTAGCTGACGAAATGCTATTTCAGACGCA
AATTTATTTTAACGAAATTTATTTAACTTACTTTATGAGATTTCGAGGCT
GTCTTTGTAGCATAGATTTAGTAGAAATTTCTAAAACATGTCTTGATACC
TTTGTTTAACAACTTAAAGTATTACCGTTAAAAACTTTATAACCAGGAAA
AATTTTAGTTTGTCATCTTTTTAAGTTTTTAggaatattttattttgttt
tcatcgCATTGGTGCATCGTTTTAGTTagtatattttcttttgtttcgtt
taaatggaaaaagaaaaatattcaattttgt
Run BLAST on NCBI

protein sequence of TCONS_00001968-protein

>TCONS_00001968-protein ID=TCONS_00001968-protein|Name=TCONS_00001968-protein|organism=Clytia hemisphaerica|type=polypeptide|length=746bp
MKIIAICVFTLLVACHAKYIEKVKRADSDDPVFGTDGKLAEITVKKMLSE
TNRYRLMHDATPLGYCPVCADAAQKHADDIANTGVVKPDGKAKYGQIIFS
TSDANDVKNGNYFGTLVPAKIYDQIKNYDYVKSEFKDNAADFSQLIWEGS
EVAGFAGKKATDGTVYVVMYFNPPGNNETMSFYENVNRVTGAGDAECGHV
KCDDGWTLHGCSCFKFFEDELSWPDAVDHCNILKASLASAESMEEGTLLR
TMMMEKEKQAWVGMSDTANKGGFQFVDGTPYVYSDWSFESYEWLYAHPND
ARSKCITSSKDGWNYKECSDKLPSICRSRPNGVMSFALDLYFPGSQFTNE
LAMPGTQRYNTMKNTIDKAFNDSYGGDIWYVGSTFYQFMPRDNGEVAAST
MLRFAPDIRAPVDPITKLRDILRKQTDVKILAVRLIPGVGRVSAVSVTGG
TCPSGCSGDCYPECNPVCCGAAVSLSAPAIPSGFTACPQFPGCGTPCQSS
CSQSCCQQNPYQAAQMMAPPMPMAGGCPQFPGCAAQCAPRCQASCCQQQQ
GMMMPPMMAAPMQSACPQFPGCGAQCAPRCQASCCQQQQGMMMPPPMMAA
PMMPMQSACPQSPSCAAQCAPRCQASCCQQNQMPAPMMPMPMAGGCPMMP
GCSASCAPQCSQQCCQQNQQAQIPQQQLVIQQAPVVLQPLGMGSCPIFPG
CSQACAPACRASCCTNGMMARTMGKKRSKVSHHKLHKKSKLFKKSE
Run BLAST on NCBI

transcript from alignment at sc0000012:1020338..1026793-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001968 ID=TCONS_00001968|Name=TCONS_00001968|organism=Clytia hemisphaerica|type=transcript|length=6456bp|location=Sequence derived from alignment at sc0000012:1020338..1026793- (Clytia hemisphaerica)
TTTGAAAAAAAAATCTGTTCCCGCCAGCCAGATGTTCAAATTGTTAGAAC
GTTCGAATATAGAGTGCTTCTCTGCGGAAAAACAAATAAACTTTGATAAT
AATGCTTCAAATAAGAAAAAAAGAAGATTTTGTTGTCAAACTGATTGTTC
AATGCCAGTTTAGTATGCTTCATTGATTTTGAACAATCGAATTCGTAAAT
AAATGCGACGCACCTTTAGTTTTGTCTATGCGCTTGAATAACTTTAATTT
CTTCGGGGAGATCGGAATTTCGGCAAACGAAAAAAACACCCCTCGACTCA
AAGTAAGATCAATTTTTATAATTTGATGAAAATATTTTTATAATGTCAAT
TATTTGTTAATTTTGGCTTTTTGGCGTGGATCATTTGTTTTGTTTTAATT
CTAACCTGGATTTTTTATATGGATTTTGTTGTTGCTTTCCTATGAATTTT
GTTTTTTCTTATTTTATTATAGATATATCCAGTACCTCTTTAGATCGGCA
TAATGAAAATTATCGCCATCTGTGTGTTCACCCTTTTGGNCCAGTACCTC
TTTAGATCGGCATAATGAAAATTATCGCCATCTGTGTGTTCACCCTTTTG
GTGGCATGCCACGCCAAATACATCGAAAAAGGTACGACACTTTGCTGTTA
CACGGTCTGTGGAATTCAAAAAGTTTGATCGAAAGGGCCGTGGTTATAAC
CAGAAGGATACTATAGTAGAGTCTCTTTAACTCGAACCTCTATAACTCGA
TGAACGTATATAAACCTTACTTCAGAACTCGTATTGGTGCTCTCTGTTCG
AGTTATGGAGACTCCACTGCATTTTCATAGTTAGACATTCTGAATGCTGA
AAATTTCACTTTGACGCTGGAACATTTTAGAAAATTATTCTCATCCAACT
TTATTTCGTATGTTTTTCTATGATTTCTATGTCGTTTTGAATCAATTTCA
TTTTCAATATTTCGTCTTTTTCAGTAAAACGTGCTGATTCCGATGATCCT
GTATTCGGCACTGATGGAAAACGTAAGACCTTTCATATTTTACGATATTT
CACACTAAACGAGACTCTGTTCTGAAATTTTAATATGCACAATTATCTAT
AACTATCTCATACTTACTTCATTGGAGACTATCATCTCCAATCTATCATT
TAGCAAGTCTCTAGAGCTTAACTTGTTTCTCTATGTCTATGCTGAAACTC
GCCATTTTATTTCTAAAACAGCCTTATTTGATAAGATTTCACGTTTGAAA
AAGTAGCAAACGTACCGTTACGCTATTACCACAATTATATGTCGATTGCT
AAACTCACACATATCTGATCAACTTTTTCAGTTGCTGAAATCACCGTCAA
GAAAATGTTGTCAGAAACAAACAGATATCGTTTGATGCATGATGCCACGC
CCTTGGGTTACTGCCCCGTATGTGCTGACGCAGCACAAAAACACGCAGAT
GATATTGCCAACACCGGCGTCGTCAAACCAGACGGCAAAGCCAAATATGG
TCAAATCATTTTCTCTACATCTGATGCTAATGATGTCAAAAATGGAAATT
ATTTTGGAACCTTGGTCCCAGCTAAGATGTAAGTTTCTTACCTTCCTTGA
CCTAGATTTGTCTTAACTTAAACTTAACGTCTGAATTTCTTCTCACATTT
TTCATCTGATTCACGGCAGCCTTACTTGTGTTCGACCAATTTTTATTTGG
AGGAAATTCAATGGTGTTATTAGAATCTTCTCCGTTTTATAACCCTGAAG
ACACCTGCTTCTTTAACGAATTATCATTAATAAGGTTTCTTGTGAGAATC
TTTGAAAATATATTACATCAGTCTGTACTACCCTCATCCAGCTTCTAGAA
TTTTAAGCGAAGAAAATACGGTCTAAGATAAGATATGGAAATCCAATTTC
CCACCTAATTCTTTTAGCTATGATCAAATCAAGAATTACGATTACGTCAA
AAGTGAATTCAAAGACAATGCTGCCGATTTCTCTCAATTGATCTGGGAAG
GTAGTGAAGTTGCCGGATTCGCCGGTAAAAAAGCTACAGATGGTACAGTG
TACGTTGTTATGTACTTCAACCCACCTGGTAATAACGAGACAATGTCTTT
CTATGAGAATGTCAACCGTGTTACCGGTGCAGGTGATGCTGAATGCGGAC
ACGGTGAGAAGATTTTCTACTTTTCAACGAAACTTAAAAACCCCAGAAAT
CTATTGAGGTGTTAGGGGCATAACTGTTAGAATTCGATTGCTTATAAAAT
TAAACTCACAAACCCGATGGGTCCCCTTCATATTGGAAAAATTGGCCAAA
ATATCGTCCCCAGTGGAAAACTGTACTCCAATTTTTGACTGCGCTGAAGA
TAATCAAACAAACAAATCCTTACTGGGATATATTGTGCTATTTTCAGTCC
GTTTCTTTGTCCTCGCTGGCTGAAAAAATCTTGACGGGTCTGCGAGAAGA
TGTGTGATTGAGGATAGTATGGCAGAAATGTGATAAAACAGAAAAACAAA
ATGTTTTTTGGAAAGCGACCGAAAAATATCATTCGAATACCCAATTATTT
TTCAAACCCATTTTCTTTTCTTCAGTGAAATGTGACGACGGTTGGACTTT
ACATGGATGCAGTTGTTTCAAATTCTTTGAAGATGAATTATCATGGCCAG
ATGCAGTTGATCATTGTAACATCCTCAAAGCTTCATTAGCTTCAGCTGAA
TCTATGGAAGAAGGAACTTTATTGAGAAGTAAGTAAAATTCGCACATTAT
GCAAATCAGAATCGATAACGGGCTAAAAACTTGAGATTCGGTATAGTAGA
AAACCACTCTTTGACCAAAGTTTGAAACAATAAATTCGATTGCATTCAGA
TTTTTGAATAAATACTTTTACGCTCTAAAACACCATACATTTTATTCGGT
GATGAACACTTACTAAAGGTTTTGATTCCTGTTCTCCTTTTTCAGCCATG
ATGATGGAAAAAGAGAAACAAGCTTGGGTCGGTATGTCCGATACTGCTAA
CAAAGGTGGATTCCAATTCGTTGATGGTACACCATACGTTTATTCTGATT
GGAGTTTTGAATCTTACGAATGGTTGTACGCACATCCCAACGATGCACGA
TCCAAATGTATCACTTCTTCCAAAGATGGATGGAACTACAAAGAATGCTC
CGATAAATTACCGTCCATTTGCCGATCCCGACCAAACGGTGTCATGAGCT
TTGCTTTGGATCTGTATTTCCCAGGATCTCAATTCACCAATGAGTTGGCT
ATGCCAGGAACTCAACGATACAACACCATGAAAAATACAATCGACAAAGC
TGTAAGTTCTAGTTCATTTCTACGCCGTCTCTACATCTAAGTACTTGCAA
AAACACTCGTATCCAAAAAAGTACTTCAAATTGACAGCACGAACGAATTG
ATTGTTTGTATCCCCTCGGAGTTTTATTACTTTTTGAAATCAAATAAAAG
CTTGGTGAAGCCATTTGATAATTTCAGAATTTTCCATCTATAACATTACT
TTTTACAACTTTTTAGTTCAACGATTCATACGGAGGTGATATCTGGTATG
TTGGAAGCACTTTCTACCAATTCATGTAAGTAAAAATCTCCGTTCCCAAT
CCCTCGTACTAAGCCAAAGCAATATACCTATTTCGTTATACTTTCAGTTC
ACTCTCTCTAATTCAATCTTAAATAGGACAAAAATGTTATTCGAATGAGA
GAAAGATTCGAATCTAAAAAAGTATTTCACGACGCTTTCCCCTTGACGGG
AACCGAGAATTAGTTCGAATTATAGAAAGATTCGAATAATGGTTCGGAGG
TCGAATTAACGGGAGTTTACTGTATTTTATAAAATTAATTNTAGAAAGAT
TCGAATAATGGTTCGGAGGTCGAATTAACGGGAGTTTACTGTATTTTATA
AAATTAATTTACTTTTCTTACCTTTACACTATTCTTTTATCAGGCCACGA
GACAATGGAGAAGTTGCTGCATCAACCATGTTGAGATTTGCACCAGACAT
CCGTGCTCCAGTTGACCCAATCACCAAATTGAGAGACATCTTACGTAAAC
AAACTGACGTCAAAATTTTGGCTGTCCGTCTCATCCCAGGTACGTCTATT
CATCTGGTGATCTGTTCATATGCACAGGGACTGTTGGAAGGCGTGATTTT
AACAATCATCAATAAATTTTCACTTTTTTGCTTCCTATTTGGAAACCATT
ACGGTGTATTTATAAACTAATCCCTAAAGAGGGGTTTACAGATGATAGCA
GAAAAGGGTGAACAGTTAGCGTGAACAAACTTTTGGATCTAAAATCCCAT
ATCAATGGTTTCGAGCCATTATTGAAAATTGCATATTTTCCCTCTAGACC
TATAGAAATTGATTTATATTTTCCCCTTTGTAATTATAGGTGTTGGACGT
GTTTCTGCTGTCTCCGTGACCGGCGGAACTTGCCCATCTGGTTGTTCCGG
TGATTGTTATCCAGAATGTAACCCAGTATGCTGTGGTGCCGCTGTTTCTC
TCAGTGCACCTGCTATTCCTTCCGGATTCACAGCCTGTCCACAATTCCCA
GGATGTGGAACTCCATGTCAATCAAGCTGCTCTCAAAGCTGTTGTCAACA
AAACCCTTACCAAGCTGTATGTTTTCGATTTTTTCATAAAATCCACTAGG
GTCAAAATCTATAAAAAACTTTTTGTTTTCAGATTTCGTCGATTTACAAT
AAGCTAACGTTACTCATCATTTGAATTAAACATTTCTCTATATCACATTG
AAATTCTACCTGACGATTCGATTGGGTCAAATCTGAAAGCAAGACTTTCT
AAGTTAAAACAGTCTTGATACCATGGGAACAAAACATTCCATTTTGAAGG
TTACATTCACATCATGACCATGTTCATACATCATATAATCTTTTTTTCGT
TCTTCTAGGCCCAAATGATGGCTCCACCTATGCCAATGGCCGGCGGATGC
CCACAGTTCCCTGGATGTGCTGCCCAATGTGCCCCACGTTGCCAAGCATC
ATGTTGCCAACAACAACAAGGAATGATGATGCCACCAATGATGGCCGCTC
CAATGCAAAGTGCTTGCCCACAATTCCCCGGTTGCGGTGCCCAATGTGCA
CCACGTTGTCAAGCATCTTGTTGTCAACAACAACAAGGAATGATGATGCC
ACCACCAATGATGGCCGCCCCAATGATGCCCATGCAAAGCGCGTGTCCTC
AATCCCCAAGCTGTGCCGCCCAATGTGCACCACGTTGTCAAGCTTCTTGT
TGTCAACAAAACCAAATGCCAGCCCCAATGATGCCCATGCCAATGGCTGG
TGGTTGTCCAATGATGCCTGGATGTTCAGCATCATGTGCTCCACAATGCT
CACAACAATGTTGCCAACAGAATCAACAAGCTCAAATTCCACAACAACAA
CTCGTCATCCAACAAGCTCCAGTCGTATTACAACCTCTCGGTATGGGAAG
TTGTCCAATCTTCCCAGGATGTTCACAAGCCTGTGCACCAGCCTGTCGCG
CTAGCTGCTGCACCAATGGTATGATGGCTCGAACCATGGGAAAGAAACGT
AGCAAAGTTTCACATCACAAACTTCACAAGAAAAGCAAATTGTTCAAAAA
ATCTGAATAATTTCCATTCCTGATAGACACGCCAACAAACTTTCTTTGTT
CAAAAGTTTTTTAAATTAAACTATTGAAATAAAGACTGTGTTGTGTTTAT
AAGACTGTTTACAATATCACAGACCGTTAAATAAATGAGCAGCGAATAAA
AGACAATATTGTAATATAAATAAGACCTTGCATTACGAAAATAATGCTCA
GAGATTTTGAGACGAGTGTTAGCACTGACGATTTTATCCAGTGAGAANTA
TTGTAATATAAATAAGACCTTGCATTACGAAAATAATGCTCAGAGATTTT
GAGACGAGTGTTAGCACTGACGATTTTATCCAGTGAGAAAGGAGATAGAG
CTATTCCACTTGTAAAATGTTTTTATATTTTTTTACTCAGAATTTTAAAG
AAAAACGTTTATTTTGAATATGGTTATTATATAAGTAGATTTCTATTCAG
TATCATTTTTGACGTGATCTTACTTCTTCGACAGTCCTCCTCATTTAAAA
ATAAGTATGTAGTCATGTAAAAGTAATCTTAAAATTGACTTGAAACCTAG
CTGACGAAATGCTATTTCAGACGCAAATTTATTTTAACGAAATTTATTTA
ACTTACTTTATGAGATTTCGAGGCTGTCTTTGTAGCATAGATTTAGTAGA
AATTTCTAAAACATGTCTTGATACCTTTGTTTAACAACTTAAAGTATTAC
CGTTAAAAACTTTATAACCAGGAAAAATTTTAGTTTGTCATCTTTTTAAG
TTTTTAGGAATATTTTATTTTGTTTTCATCGCATTGGTGCATCGTTTTAG
TTAGTATATTTTCTTTTGTTTCGTTTAAATGGAAAAAGAAAAATATTCAA
TTTTGT

Coding sequence (CDS) from alignment at sc0000012:1020338..1026793-

>TCONS_00001968 ID=TCONS_00001968|Name=TCONS_00001968|organism=Clytia hemisphaerica|type=CDS|length=2241bp|location=Sequence derived from alignment at sc0000012:1020338..1026793- (Clytia hemisphaerica)
ATGAAAATTATCGCCATCTGTGTGTTCACCCTTTTGGTGGCATGCCACGC
CAAATACATCGAAAAAGTAAAACGTGCTGATTCCGATGATCCTGTATTCG
GCACTGATGGAAAACTTGCTGAAATCACCGTCAAGAAAATGTTGTCAGAA
ACAAACAGATATCGTTTGATGCATGATGCCACGCCCTTGGGTTACTGCCC
CGTATGTGCTGACGCAGCACAAAAACACGCAGATGATATTGCCAACACCG
GCGTCGTCAAACCAGACGGCAAAGCCAAATATGGTCAAATCATTTTCTCT
ACATCTGATGCTAATGATGTCAAAAATGGAAATTATTTTGGAACCTTGGT
CCCAGCTAAGATCTATGATCAAATCAAGAATTACGATTACGTCAAAAGTG
AATTCAAAGACAATGCTGCCGATTTCTCTCAATTGATCTGGGAAGGTAGT
GAAGTTGCCGGATTCGCCGGTAAAAAAGCTACAGATGGTACAGTGTACGT
TGTTATGTACTTCAACCCACCTGGTAATAACGAGACAATGTCTTTCTATG
AGAATGTCAACCGTGTTACCGGTGCAGGTGATGCTGAATGCGGACACGTG
AAATGTGACGACGGTTGGACTTTACATGGATGCAGTTGTTTCAAATTCTT
TGAAGATGAATTATCATGGCCAGATGCAGTTGATCATTGTAACATCCTCA
AAGCTTCATTAGCTTCAGCTGAATCTATGGAAGAAGGAACTTTATTGAGA
ACCATGATGATGGAAAAAGAGAAACAAGCTTGGGTCGGTATGTCCGATAC
TGCTAACAAAGGTGGATTCCAATTCGTTGATGGTACACCATACGTTTATT
CTGATTGGAGTTTTGAATCTTACGAATGGTTGTACGCACATCCCAACGAT
GCACGATCCAAATGTATCACTTCTTCCAAAGATGGATGGAACTACAAAGA
ATGCTCCGATAAATTACCGTCCATTTGCCGATCCCGACCAAACGGTGTCA
TGAGCTTTGCTTTGGATCTGTATTTCCCAGGATCTCAATTCACCAATGAG
TTGGCTATGCCAGGAACTCAACGATACAACACCATGAAAAATACAATCGA
CAAAGCTTTCAACGATTCATACGGAGGTGATATCTGGTATGTTGGAAGCA
CTTTCTACCAATTCATGCCACGAGACAATGGAGAAGTTGCTGCATCAACC
ATGTTGAGATTTGCACCAGACATCCGTGCTCCAGTTGACCCAATCACCAA
ATTGAGAGACATCTTACGTAAACAAACTGACGTCAAAATTTTGGCTGTCC
GTCTCATCCCAGGTGTTGGACGTGTTTCTGCTGTCTCCGTGACCGGCGGA
ACTTGCCCATCTGGTTGTTCCGGTGATTGTTATCCAGAATGTAACCCAGT
ATGCTGTGGTGCCGCTGTTTCTCTCAGTGCACCTGCTATTCCTTCCGGAT
TCACAGCCTGTCCACAATTCCCAGGATGTGGAACTCCATGTCAATCAAGC
TGCTCTCAAAGCTGTTGTCAACAAAACCCTTACCAAGCTGCCCAAATGAT
GGCTCCACCTATGCCAATGGCCGGCGGATGCCCACAGTTCCCTGGATGTG
CTGCCCAATGTGCCCCACGTTGCCAAGCATCATGTTGCCAACAACAACAA
GGAATGATGATGCCACCAATGATGGCCGCTCCAATGCAAAGTGCTTGCCC
ACAATTCCCCGGTTGCGGTGCCCAATGTGCACCACGTTGTCAAGCATCTT
GTTGTCAACAACAACAAGGAATGATGATGCCACCACCAATGATGGCCGCC
CCAATGATGCCCATGCAAAGCGCGTGTCCTCAATCCCCAAGCTGTGCCGC
CCAATGTGCACCACGTTGTCAAGCTTCTTGTTGTCAACAAAACCAAATGC
CAGCCCCAATGATGCCCATGCCAATGGCTGGTGGTTGTCCAATGATGCCT
GGATGTTCAGCATCATGTGCTCCACAATGCTCACAACAATGTTGCCAACA
GAATCAACAAGCTCAAATTCCACAACAACAACTCGTCATCCAACAAGCTC
CAGTCGTATTACAACCTCTCGGTATGGGAAGTTGTCCAATCTTCCCAGGA
TGTTCACAAGCCTGTGCACCAGCCTGTCGCGCTAGCTGCTGCACCAATGG
TATGATGGCTCGAACCATGGGAAAGAAACGTAGCAAAGTTTCACATCACA
AACTTCACAAGAAAAGCAAATTGTTCAAAAAATCTGAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001014XLOC_001014Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001968-proteinTCONS_00001968-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001968-exon-sc0000012-1575043694:1026492..1026793TCONS_00001968-exon-sc0000012-1575043694:1026492..1026793Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1575043694:1026163..1026321TCONS_00001968-exon-sc0000012-1575043694:1026163..1026321Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1575043694:1025772..1025819TCONS_00001968-exon-sc0000012-1575043694:1025772..1025819Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1575043694:1025216..1025462TCONS_00001968-exon-sc0000012-1575043694:1025216..1025462Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1575043694:1024641..1024876TCONS_00001968-exon-sc0000012-1575043694:1024641..1024876Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1575043694:1024066..1024218TCONS_00001968-exon-sc0000012-1575043694:1024066..1024218Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1575043694:1023493..1023848TCONS_00001968-exon-sc0000012-1575043694:1023493..1023848Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1575043694:1023219..1023277TCONS_00001968-exon-sc0000012-1575043694:1023219..1023277Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1575043694:1022705..1022850TCONS_00001968-exon-sc0000012-1575043694:1022705..1022850Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1575043694:1022178..1022404TCONS_00001968-exon-sc0000012-1575043694:1022178..1022404Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1575043694:1020338..1021885TCONS_00001968-exon-sc0000012-1575043694:1020338..1021885Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1510915933:1026492..1026793TCONS_00001968-exon-sc0000012-1510915933:1026492..1026793Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1510915933:1026163..1026321TCONS_00001968-exon-sc0000012-1510915933:1026163..1026321Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1510915933:1025772..1025819TCONS_00001968-exon-sc0000012-1510915933:1025772..1025819Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1510915933:1025216..1025462TCONS_00001968-exon-sc0000012-1510915933:1025216..1025462Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1510915933:1024641..1024876TCONS_00001968-exon-sc0000012-1510915933:1024641..1024876Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1510915933:1024066..1024218TCONS_00001968-exon-sc0000012-1510915933:1024066..1024218Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1510915933:1023493..1023848TCONS_00001968-exon-sc0000012-1510915933:1023493..1023848Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1510915933:1023219..1023277TCONS_00001968-exon-sc0000012-1510915933:1023219..1023277Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1510915933:1022705..1022850TCONS_00001968-exon-sc0000012-1510915933:1022705..1022850Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1510915933:1022178..1022404TCONS_00001968-exon-sc0000012-1510915933:1022178..1022404Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1510915933:1020338..1021885TCONS_00001968-exon-sc0000012-1510915933:1020338..1021885Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1491911889:1026492..1026793TCONS_00001968-exon-sc0000012-1491911889:1026492..1026793Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1491911889:1026163..1026321TCONS_00001968-exon-sc0000012-1491911889:1026163..1026321Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1491911889:1025772..1025819TCONS_00001968-exon-sc0000012-1491911889:1025772..1025819Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1491911889:1025216..1025462TCONS_00001968-exon-sc0000012-1491911889:1025216..1025462Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1491911889:1024641..1024876TCONS_00001968-exon-sc0000012-1491911889:1024641..1024876Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1491911889:1024066..1024218TCONS_00001968-exon-sc0000012-1491911889:1024066..1024218Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1491911889:1023493..1023848TCONS_00001968-exon-sc0000012-1491911889:1023493..1023848Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1491911889:1023219..1023277TCONS_00001968-exon-sc0000012-1491911889:1023219..1023277Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1491911889:1022705..1022850TCONS_00001968-exon-sc0000012-1491911889:1022705..1022850Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1491911889:1022178..1022404TCONS_00001968-exon-sc0000012-1491911889:1022178..1022404Clytia hemisphaericaexon
TCONS_00001968-exon-sc0000012-1491911889:1020338..1021885TCONS_00001968-exon-sc0000012-1491911889:1020338..1021885Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:1020338..1026793 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.452715	0.397321	0.170862	0.0960875	2.13679	1.88149	98.06	111.395	51.8071	54.6389	94.4954	63.9625	174.782	159.691	114.479	329.86	195.052	187.961	0.930408	1.29255	107.983	124.769	85.1108	101.131	151.177	177.756	20.3403	6.07286	0.68672	0.853243
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001304C-type_lectin-like
IPR014044CAP_domain
IPR000082SEA_dom
IPR016186C-type_lectin-like/link
IPR034113SCP_GAPR1-like
IPR016187CTDL_fold
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001968 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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