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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002040 ID=TCONS_00002040|Name=TCONS_00002040|organism=Clytia hemisphaerica|type=transcript|length=3041bp
TTCCTTGAAATTGTGGATCTAGGGCTAAACCTCACGTTTGTTTATCTTTA
cagaagaaaaactaaaatgaCAAAGAAATACAAAATAATATAACAAAAAA
TAGCGTTTTGATGCACACGACTAAAGAAAGATGGCATTTGTTGAAGGTTA
TGACGTGGAAACAGTGCAAGATATTTCATCCGATTTATTTTGCGTCATTT
GTTTGAAATTGATGAGAAATCCTGTTCAATTCAAGTGTGGCCATGGAATG
TGCTTTGTATGCTTCAAAAGCTTGCTACACCGCTCTAAACAAAAAGCCAC
AACACAATGTCCACAATGTCGTGAAGTTGTCAAAGAAGGACAGATTGTAT
CAAACGTGATGTTGCACCGCATTATACTTTCATTGCATGTGCTATGTGGT
AACCATGACAACGGATGTAAATGGACCGGTGAATTGGATCGATTTGATGA
GCATTTCGCGCAATGTACGAAACACTCAGAAAATGCAGCaaacaaaaagt
ccaaaaagaaaaagAAAAGAGCAGATCAAAATCAACAAGCACCACAAAAC
ATCCAGAACGAGCTTCTCCTGCAAATCACTGAACAGCTCTCAAACCTTAA
AGAATACATTATCAGCCCGAACGCAACTAAAACGCAAGACTCGGACCCAA
ACTCCACGGACGCCGCGATGAAACCACCGTTCTGGACTAGATTTAACAAT
AAAAGTGTCACGTCTAGTCGCAAAACTAAAACATTAGCCTTGATCCTTTT
CACTATATCCTTATTGTCTGGAATGCATATACTGGGCGGAGGCTTCTCTG
ATTGGTTCATGGACGAAGACGCAACAGCCAATCAAACGCCTGGAATCGAT
CACGTGGCAACATACCAGCAAGTCCATAGCGAACTGGCAAAAATGAATTC
CCTAATATACGcacagcaaaacaatttttttcaactccATCTCGGCTCCA
AGGAGCTACAATCGGACCTGGAAGCACAGAAAACGGCGACACTCAGGCTA
ACGGGTTTATACTTGAAGAATAGCCTGAACGCGGCACATTTCACTAAGAC
CTCCATCGCAGATGATGTGGATGATGTGTTTTCACAAGAGATGATGCACC
GTAAATTAGGACTGGAACGAACGGCCGGTTTCCAATTGGTCAACATGAAG
GAAGATGCTTACGCAAGGTTGAAATCACTACAAAACCAATCGCTGGCCAC
ACTGACTGTATTTAACGCTACCGATTTTTTAACAccttttttgaaagatt
gtAAAGCATTCCAACGTGATTTCGCACAACAAATTATTATTGCCTTGACA
ACCAGTGAAAACTTAGTTACGCATTCTTTTCAACAAGCTAGACGCAAGAT
GGCGTTTTACGTTGCTAAGGAGAGCGATTTCACTGGATTTGATTATGAAG
ATGTTAAGAAACATTTAGTGGAAGAACGCGAGAAAAGTGACGTCATCTTA
CGTGAGAAATTAAACGAGGCAAAACAAGAGGAATATGTTCGAATGTTGAG
ACAAGAATACAATGCGTTAAATCAAACGTACCATGAAAtgttattaaaat
caatttcacAGTACGAGTTGGACGCGTCTTATCAAAATCGAGCAGCTTTC
GTTTTTAGCCAacttgaaaatgttgattttggaAACGGACGTTACTTGTG
GAGAATGAACAGCTCCCTGTTACCTCTATTACCAACTGGACATGGGTACT
ATTCAGAGAAATTCACCACCATTGAGGCTAAAGCACCGAACCAAGTTGTC
ACCTATGCTAAATTATGGTTATTACGTACGTCGGTTCAAGATAACACATG
GAAAGTGACATATGAGCAGTACGGTGATTCTCCAGTGAGAATGAAAGTTT
TAGTTGTTAATCAGAAGATGGATAAGGATTTAGAATGTGTGGAATCGTTT
CGCCAGACGAATGAAAAAGATGAGCTGATTATCGATTTTGATATTCCCTT
CAGTTTTGAAGTTTTGGAAGAGAATGGTTATATTGTAGATGAGAAGATTT
TGGTCAAAGCATATGTTGTATAGGATATACTAACTGATTGGCTAAGCCAG
ATTGATTCTGTCACTtggtaaaatctgatggtaagttgtgactgaatatc
tagtttttcaaggcaaaatTAAAATTCCGTACATCATACAAATCATTAAA
GCACCGATAACGCTATATTGCCGTCAGCCGTATCTTGGCCTTGTAAAAAC
TGGTTTGGCTATCCAGGCTACTGGTTGGTTTCGTTGTCATTCCAAGGGTG
ATTGATTATACTTTAAGGGCCGAAAGTGTTCCGCTAaaaatttccctaaa
ttttacattttacgaGATTTtaacatagatttataaagcccgaagggcta
gatggtgTGCcttaagaaaaaagtgaatatcgcaaaaaatattgctgcta
ttgttttcgaaaacccgcgaagcttctgattggtcaagcgctgaaattct
attgtaatgaattaggtaggatttcctacctaacctcggcacacttttca
gacgatatctagctcttcgggctttataaatctatgaatTTTACACATAG
AACTTTcgcaaaatcaaaatcatcattttcaatcaaaatcaaaagatttc
tttttacAGTAATATTTTTCTTAACATCTTCGAACCAAAATATAGTTTTA
TAtcctttttatagatttttatatagcattattttatagatttttttaga
aatagaTTTTATCCAGATTTTATTAGATTCATCCTATAATAATAGAATTA
agtatatttcaaattattcgtGATATACCAAAAAACAGCACTCAATTTTC
TTGCCtttttgaaagttattttttcattaGACCTATTACAATATCAACGG
TGCCACCTCGTTTTTGGCCTCCTGTAGTACAGAATCAcgaatattattat
atactaCCATATTGTTGTTATTATATATACTTGATatataatcaaatttt
tattatatcaaaaatatatttagtcAGTCTCAGTCTTCCCCTCATTGTTT
CCCCTCGAAATATGTTATCATTACGTCATATCACGTCATCG Run BLAST on NCBI protein sequence of TCONS_00002040-protein >TCONS_00002040-protein ID=TCONS_00002040-protein|Name=TCONS_00002040-protein|organism=Clytia hemisphaerica|type=polypeptide|length=630bp
MAFVEGYDVETVQDISSDLFCVICLKLMRNPVQFKCGHGMCFVCFKSLLH
RSKQKATTQCPQCREVVKEGQIVSNVMLHRIILSLHVLCGNHDNGCKWTG
ELDRFDEHFAQCTKHSENAANKKSKKKKKRADQNQQAPQNIQNELLLQIT
EQLSNLKEYIISPNATKTQDSDPNSTDAAMKPPFWTRFNNKSVTSSRKTK
TLALILFTISLLSGMHILGGGFSDWFMDEDATANQTPGIDHVATYQQVHS
ELAKMNSLIYAQQNNFFQLHLGSKELQSDLEAQKTATLRLTGLYLKNSLN
AAHFTKTSIADDVDDVFSQEMMHRKLGLERTAGFQLVNMKEDAYARLKSL
QNQSLATLTVFNATDFLTPFLKDCKAFQRDFAQQIIIALTTSENLVTHSF
QQARRKMAFYVAKESDFTGFDYEDVKKHLVEEREKSDVILREKLNEAKQE
EYVRMLRQEYNALNQTYHEMLLKSISQYELDASYQNRAAFVFSQLENVDF
GNGRYLWRMNSSLLPLLPTGHGYYSEKFTTIEAKAPNQVVTYAKLWLLRT
SVQDNTWKVTYEQYGDSPVRMKVLVVNQKMDKDLECVESFRQTNEKDELI
IDFDIPFSFEVLEENGYIVDEKILVKAYVV Run BLAST on NCBI transcript from alignment at sc0000018:416919..433182+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002040 ID=TCONS_00002040|Name=TCONS_00002040|organism=Clytia hemisphaerica|type=transcript|length=16264bp|location=Sequence derived from alignment at sc0000018:416919..433182+ (Clytia hemisphaerica)
TTCCTTGAAATTGTGGATCTAGGGCTAAACCTCACGTTTGTTTATCTTTA
cagaagaaaaactaaaatgaCAAAGAAATACAAAATAATATAACAAAAAA
TAGCGTTTTGATGCACACGACTAAAGAAAGATGGCATTTGTTGAAGGTTA
TGACGTGGAAACAGTGCAAGATATTTCATCCGATTTATTTTGCGTCATTT
GTTTGAAATTGATGAGAAATCCTGTTCAATTCAAGTGTGGCCATGGAATG
TGCTTTGTATGCTTCAAAAGCTTGCTACACCGCTCTAAACAAAAGTAAgt
catattcatgatattcatgacataatcttttatacggaagcatcTTAAAT
GACCCGGGCGTTATGAATACAGTGGagtccataactcgaacacgcacgag
gAAATTTTGGAGTTAcggaaatttcgagttacggAGTAAGGTACATAAGG
GACCATTAAACTTGTTCTAGTTAAGGTGGCATTCGAGTGGTAGAGGTTCG
AGATAAAGAGACACCACTGTATCACTATAGACATGGAAACTTCAGCTGTT
ATTGGATGGCTTATGTTTAAGTATTAGAAACTGAAGAGATTTAACTCCAA
AAGCTTGACAATTACTTGACAAAAGTTATACCTCTATACTATCCTCTATC
TATTATAAGTAACGTTAAGCACAAACATTTTTTAGATGTTAGTAGTTTGC
CAAACATTCATTATTTGAGTTATCTGgtacacgtttgttttttataagaa
catccaatttttttgcctcttaactttttgagttttaagcctaaaatgtt
cttaacatgttcttaatttcaccattttgtgagtattttggtccattttc
ctaatAAATTTCATTCAATATTCACAGAGCCACAACACAATGTCCACAAT
GTCGTGAAGTTGTCAAAGAAGGACAGGTTTGTTTGTGCTGAAGCTCCATT
ATTGAgctatttcataaaaaagaattttccccAACCTCTCTGTACAGAGT
GTCCTTAAAAcctgggaaaattttggagagtTGAAATTGTCGGGGAGCAG
AATTCAATATCTCGAGTTAGAAGcgtttttgcttaaccctaaaaaagaat
ggggttgttatataccgttggaacggaaattttatgctgattatggaaac
ccaggtcttaaaaagtctatcctggacgattttgaaaacgaggctggagt
ttgcactcctccgtggtgttttttcgattttacctgttttagaaaaatgc
tgactgtcagcaaagtaaaggtttttagaatttaattttttttgaaaatt
gctagcaatagaattgccttttaaacaaaaaattcaaaatttttgaaaaa
aacattttttgcactccttcttggaggttttttgcaaaaatcagcgtttt
tacaaaaatatactgctaAAACAAGTNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACCGTTGAGAATTTCT
TAGCAGGTGGGGAGCTTGAAGGGGCTAAGTGCTAACGGGAATGgcaaatc
tctttttttatcATCGAGATGGTTTTTTAGTCCACTTCTTTCAATTGATA
TGAGTTCTGGGGTTATACGTTTATGTGTTTTTACAATACCTTGCATCTGT
GGTACATCACATCACATCCTGTCTGTAGAACTGGCCCTTAAACCCTTTAG
GTAGATCTCCTATTTGACGATGGATTAGGTTAAAAGGTTTGTTTACCAGG
TCAAACtaagaggcccccagcggaccAAAAAtacacgcattcacgcaagt
ttttctcaaattcatgCAAACCCAATtatttgggaaatcggggaaatttt
cggaaaaaattaGGGAAATTGTCAAAGATAGGGGAAATTTGCACAAATTT
GGGTGAGAAGGAAAActtcacgcgttcacgcaaaaaacagggcagattca
cgcattcacgcaataaaaaatggattttcacgcattaacacaaaccgctg
ggggcccaaCTAAGTAATAGTAANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT
CACACATTGGTTTGTTTTATTACAAGATACAGATATTACAgatatgcaac
aatagtgacatTTTCAATCATACCCAAACATTTCCTCTTTCCAAGATCTT
TATATCTTTATAACTCTTATATCTTGGATGATTGATGATTAAACTACTAT
TTCAGACAGACTATTCCACTGTTTGATGCCTCGACATTAAAGAGAGTTGC
TATAGGGTCCACGATCACCATAACTTTCGAAAACTTTTACCAGTTCAGAG
CTGTGTTCTCAGGTCTTATGTATTTGTTggttaaattttttagaaacaca
TGATTTGTTGTCATAGTGATTCAAAAGTTTGAAGATCTCAACTGTATCAT
AAAGCAAGCCTATATTTCAGACTTGGGATTCCGATTCTTTGTAATCCAAT
CATCAATTCAATTACAGAACAGATACCATCGTTAAGTCGCCTTTAAATGA
TACAGATGCCTTCGATAAAAGTGCGCTGGCACCTTTTCTATTAAACTGTC
GCTAGACTATGTATTGAAGACTTCACTCAACCGCCACAAACATACGGTGT
AATAGAGGCGTAGCCACGAGTTTTCGTTTCGGGGGGCGAGATTGGAAAAA
CTTTCGCCTTTTTTAGAGGAAATTTATGCGCCGCAGGCGTAAATCTTTGC
TGTAAGCAAGTTCAAATAGCTTAACAAATGGCATTGGAAATCTCAAAGTT
AGTGAGAATAAGGtcataaaaagtgtaaaaaacgtaaaagaaAACTTCTA
AGAAATGTCAAGCAGCTTAAAGGATGCCTTAAAAAGGTCAGATGTAGCCA
GAGAAAGGTTACAAAAACTACAGAACCCTTCGCATTCTattgggaaaact
ttgacctttttggtcaatttttattttttttgggaGAANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGCAATTCTATTggtagcaa
ttttcaaaaaaaattaaattctaaaaacctttactttgctgacagtcagc
atttttctaaaacaggtaaaatcgaaaaaacactacggaggagtgcaaac
tccagcctcgttttcaaaatcgtccaggatagactttttaagacctgggt
ttccataatcagcataaaatttccattccaacggtatataacaaccccat
tcttttttagggttaagcaaaaatgccatttttggatTCTGCTCCCCGAC
TATTATCTCATTTTATAGTTGCAAATGGAGGCAATTAGATTagactttcc
tttttttcaaactgCTTTTAGAATTTGTTATTagaattcatttcaatttc
aaaacaattttactGTACTGAGGATAGTTCTCTGTTAAGGACCGAAACAT
CTAtgtaataaatttaaaaaattaaaaaaattgaacgaTAAGAAACTTCT
GTTCTATTGACGAACTTTATGATTAAGGAATATGAAAGGATTAACCTGTT
TAATCGAGAAtagtttgaattatagaaactTTCCATGGCTGAAAGATTCC
AATGAATTAGGTTCTAATTGGAGGTAGTTTGACTTTTGAAGATGTCCCAT
ACGATCATAGCGGTTGAGAATCAAGACGGGAAAGCCTAATTAGACATGGC
CCCCTGCGTGCGAATCaaattgagggggccaaaaagTGTGtcggcgacga
agaaaattttcgacttatCACCCTTATTTCatccctctaaacggtatata
taagattttttaaagtaaaaaaaattgctttgcaaaatattggtgACGGG
GGCCATGTTAGAACCTAATTCATTGGAATCTTTCAGCCTGGAAAGTCTCT
ATAATTCAAATTATTCTCGATTAAACATGAAAGATGTTCTATTCTAAATT
TTAGATTGTATCAAACGTGATGTTGCACCGCATTATACTTTCATTGCATG
TGCTATGTGGTAACCATGACAACGGATGTAAATGGACCGGTGAATTGGAT
CGATTTGATGTAACATtactgtttgtttttattattacaTTGTAACAGTG
GAACTagccggtggaacttttttcctcagtgggaataaaaactcctattg
aaatcccaacggggatcgaaattctattgttccaaggctcaaaattcagt
ggggatggttttaaaGTGCAATtcttaaacattgaatttccgatggggat
gaaatttcaaagtattttcccaccgggaacgaaattttcgccaaattttc
cagtggggctggggtcccagtgggtgtgtgacacaggggtgtattataaT
AATGACCAATAAACAAGGATTTCAAATTCAATATCTGCCAACCAAAATTT
CGTAAGTTTGCTAATTGCTAACCCTTGGACCATTTAGTACATCGAACTGT
GTGGATATCTTTTCCTATTGACTTGTATAAAGAGTTGATTCCCTTTACAT
AGCCTGACATAATGCAGTGTTCAAAGTTCTCTCGCCTCAAAGAAGTTAAA
AAAAAGAGTAATTTTCGTCTCAAAACACTATCAAAATAAGCGAAATTTAA
AGAATCTCGCCTAACTTTCTGTCCAACACGAGAATCGCTGCTTTAACCAC
TGAAAATGACGTACCTAGACACATCAAACAGGAAACACCTTTGGAAGGAA
TCTACTGATCGAATACGTGtaactttttatattttttttactgTTCACAG
GAGCATTTCGCGCAATGTACGAAACACTCAGAAAATGCAGCaaacaaaaa
gtccaaaaagaaaaaggtttgttAATTCGAAGAAACGTTTCCTCTAAAAG
ACGACCAGTTTTAAATGGAAGACTCCTAATTCCACTTTTGCTtttaactt
tctttttgcaCCCAGTGTCACAAATTACATAAAATAAGTAATGAATattt
ttgctccggcctaggagcctttaattctctcttccgacaacgaCGGTCAA
Taaggtcaagacatttttttttgtttatctaatccgatgatctattccga
tttaataaaaacggattttctggatttcgataatattgcGAAAGTATNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaatggaatgaaactttcaa
acacacatccattggaattcgaaagagaatactaaaattacaacattaca
gtgcaaatttgaaaacgatctgagcagtttttgtcgtgttatgtgtatgg
ctgGCTGAatatgatcctgttttgtattcataattatttgggcgaccgtt
ccttttgatttttcaaacccgacacagatattttacaaacatatcactat
gagaattcaataacggatactaaaacacaattcctgtgtNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNa
cagtgttataactgaaaatgatattttttggactttgttgtaatttcatt
ggctggggcgaccgttccttttgaagatttttcaaacccgaaacaggttt
tttacaaacatatcaatatgagaattcagtaaaggatacaaaaaaaaaca
attcctgtgtaaatttgaacaagattggagaaattttcacagtatggctg
aaaatgatcgtttttggacttggtCTTAATTTCATCACTGCtagcgaccg
ttccttttgatttttcaaacccgacacagattttttacaaacatatcact
atgagaattcagtaaaggatactaaaacacaattcctgtgtaaatttgaa
caagaccGGAGGAatcttcacagtgttataactgaaagtgatattttttg
gactttgtcgtaatttcattggctggggcgaccgttccttttgaagattt
ttcaaacccgaaacaggttttttacaaacatatcactatgagaattcagt
aaaggatacaaaaaaacaattcctgtgtaaatttgaacaagattggagaa
attttcacagtattatggctgaaaatgattgtttttggaCTTGGTCTTAA
TTTCATCGCGGCTGGCGACCGTTCCTTTGATTTTTcaaacccgacacaga
ttttttacaaacatatcactatgagaattcagtaaaggatactaaaacac
aattcctgtgaaaatttgaacaagatcggagaaatcttcacagtgttata
actgaaaattatattttttggactttgtcgtaatttcattggctggggcg
accgttcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatttattcgttaaga
ttatttctcatactcgctctgcaatagaattattactttgctttctgatc
tgttctgattagcagtttgtgggcaagctcatctttcacatcttttaatc
tcttaagccggagcttccagcgcagctggtttatttagaATGTATTCCat
ttgaatattttaagcttcatATATACCCTTGCTCTTTTGTCGGCTTAAAC
ATAAACTCTATTacttattttaagatttttgttgtTCATTCAGAAAAGAG
CAGATCAAAATCAACAAGCACCACAAAACATCCAGAACGAGCTTCTCCTG
CAAATCACTGAACAGCTCTCAAACCTTAAAGAATACATTATCAGCCCGAA
CGCAACTAAAACGCAAGACTCGGACCCAAACTCCACGGACGCCGCGATGA
AACCACCGTTCTGGACTAGATTTAACAATAAAAGTGTCACGTCTAGTCGC
AAAACTAAAACATTAGCCTTGATCCTTTTCACTATATCCTTATTGTCTGG
AATGCATATACTGGGCGGAGGCTTCTCTGATTGGTTCATGGACGAAGACG
CAACAGCCAATCAAACGCCTGGAATCGATCACGTGGCAACATACCAGCAA
GTCCATAGCGAACTGGCAAAAATGAATTCCCTAATATACGcacagcaaaa
caatttttttcaactccATCTCGGCTCCAAGGAGCTACAATCGGACCTGG
AAGCACAGAAAACGGCGACACTCAGGCTAACGGGTTTATACTTGAAGAAT
AGCCTGAACGCGGCACATTTCACTAAGACCTCCATCGCAGATGATGTGGA
TGATGTGTTTTCACAAGAGATGATGCACCGTAAATTAGGACTGGAACGAA
CGGCCGGTTTCCAATTGGTCAACATGAAGGAAGATGCTTACGCAAGGtaa
ctttatattttttgtttttctttagccAGTTAATTTGGTAGCGGATAGAT
TCACTCCTGGCTCAGTTTActgccaccagatgaatatacttattttcttt
acttcatttGGTACAGAGGCATGGCGAATACTTAACAGCTCATAATTGTT
TAATATTACTTTTCTTGCACTACCTTTTGcatctttttgttgaaaaagat
tCAGAAAGGGTTTTAACTTTCCAAAATTTTTACTGGCATTATGAAggcaa
tttttaaaaaacttattaGCATGCTGTCAATATTACCTTATCTGACTTTG
AATAAGTTACGCTTTTATAGTGAGGAGCGAAGAGTTTATATAAAAGTGTA
AAATCCTTTATCTCGTAAAAATGATGCCTTGATTAGTTTTGTCAAATAGT
GGCTCAATCTTAGTGCAAAAGAGTCTCCATAGCTATCGCTATAAGGAATA
GAGACTTGTTTACTAAGGGACCAAAAAACTGTTCGAGCCAACGAGACATT
Gaacagttattggacaaagttgaatccaatatgcaaaaatattgggcgtg
cgaGAACGCTAAGATATTACTCGTTTTCCAGCATAATGCCAACTTATAAG
GTCATAAATCGAGATTATTGgtagttttttttcgaaatgatGAGTTtcta
ttttgtgacgtaacgtcaaaaagaagatgctcaattaTCATTGAACTCGT
Tgcatgacgtcaatttttgaaatatatagcctccataggccatttcacag
ttgaaatggatcatgggtaatcaggactgattgcgccccgATAACGGTTT
CCCGTTGGTTATAcggaaaaaatcttcaaaattttgttcaaaactttgga
ccaataataagtcgtcattagcgcgcaatggtcctgattacccattacgc
tttgcgactgtgaaatggcctatggaagctatatattcgaaaggttctag
gaaaattgcccccgagaaaattgccccccggaaaactgcccccggaaaat
tgccccccggaaaattgccccctaggaaaactgCCCCCTNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Ntggggggcaattttcctagggggcaattttccggggggccgttttccgg
ggggcaattttccggggggcagttttccggggggcagttttccggggggc
agttttctcgggggcaattttcctgacaccatattcgaaaatattgcaca
gcaaagaagccaatcaaatgtcgctatttacgcgtGTCGGATAATAACCA
AGATAAAGAGGCTCTAGATATGAAGATTGTGTAGCTCTTTTTACCCAAGC
TTGTTTGATAGATAATGTTCTGcactttgaaatttcaaataactTGATAA
ctcagttttattttttttatttcgctACGAAACAGAATATTAAATATATA
GAGATACGGTACACAAGctcttcttttttatatttccaAGGTTGAAATCA
CTACAAAACCAATCGCTGGCCACACTGACTGTATTTAACGCTACCGATTT
TTTAACAccttttttgaaagattgtAAAGCATTCCAACGTGATTTCGCAC
AACAAATTATTATTGCCTTGACAACCAGTGAAAACTTAGTTACGCATTCT
TTTCAACAAGCTAGACGCAAGATGGCGTTTTACGTTGCTAAGGAGAGCGA
TTTCACTGGATTTGATTATGAAGATGTTAAGAAACATTTAGTGGAAGAAC
GCGAGAAAAGTGACGTCATCTTACGTGAGAAATTAAACGAGGCAAAACAA
GAGGAATATGTTCGAATGTTGAGACAAGAATACAATGCGTTAAATCAAAC
GTACCATGAAAtgttattaaaatcaatttcacAGTACGAGTTGGACGCGT
CTTATCAAAATCGAGCAGCTTTCGTTTTTAGCCAacttgaaaatgttgat
tttggaAACGGACGTTACTTGTGGAGAATGAACAGCTCCCTGTTACCTCT
ATTACCAACTGGACATGGGTACTATTCAGAGAAATTCACCACCATTGAGG
CTAAAGCACCGAACCAAGTTGTCACCTATGCTAAATTATGGTTATTACGT
ACGTCGGTTCAAGATAACACATGGAAAGTGACATATGAGCAGTACGGTGA
TTCTCCAGTGAGAATGAAAGTTTTAGTTGTTAATCAGAAGATGGATAAGG
ATTTAGAATGTGTGGAATCGTTTCGCCAGACGAATGAAAAAGATGAGCTG
ATTATCGATTTTGATATTCCCTTCAGTTTTGAAGTTTTGGAAGAGAATGG
TTATATTGTAGATGAGAAGATTTTGGTCAAAGCATATGTTGTATAGGATA
TACTAACTGATTGGCTAAGCCAGATTGATTCTGTCACTtggtaaaatctg
atggtaagttgtgactgaatatctagtttttcaaggcaaaatTAAAATTC
CGTACATCATACAAATCATTAAAGCACCGATAACGCTATATTGCCGTCAG
CCGTATCTTGGCCTTGTAAAAACTGGTTTGGCTATCCAGGCTACTGGTTG
GTTTCGTTGTCATTCCAAGGGTGATTGATTATACTTTAAGGGCCGAAAGT
GTTCCGCTAaaaatttccctaaattttacattttacgaGATTTtaacata
gatttataaagcccgaagggctagatggtgTGCcttaagaaaaaagtgaa
tatcgcaaaaaatattgctgctattgttttcgaaaacccgcgaagcttct
gattggtcaagcgctgaaattctattgtaatgaattaggtaggatttcct
acctaacctcggcacacttttcagacgatatctagctcttcgggctttat
aaatctatgaatTTTACACATAGAACTTTcgcaaaatcaaaatcatcatt
ttcaatcaaaatcaaaagatttctttttacAGTAATATTTTTCTTAACAT
CTTCGAACCAAAATATAGTTTTATAtcctttttatagatttttatatagc
attattttatagatttttttagaaatagaTTTTATCCAGATTTTATTAGA
TTCATCCTATAATAATAGAATTAagtatatttcaaattattcgtGATATA
CCAAAAAACAGCACTCAATTTTCTTGCCtttttgaaagttattttttcat
taGACCTATTACAATATCAACGGTGCCACCTCGTTTTTGGCCTCCTGTAG
TACAGAATCAcgaatattattatatactaCCATATTGTTGTTATTATATA
TACTTGATatataatcaaatttttattatatcaaaaatatatttagtcAG
TCTCAGTCTTCCCCTCATTGTTTCCCCTCGAAATATGTTATCATTACGTC
ATATCACGTCATCG Coding sequence (CDS) from alignment at sc0000018:416919..433182+ >TCONS_00002040 ID=TCONS_00002040|Name=TCONS_00002040|organism=Clytia hemisphaerica|type=CDS|length=1893bp|location=Sequence derived from alignment at sc0000018:416919..433182+ (Clytia hemisphaerica)
ATGGCATTTGTTGAAGGTTATGACGTGGAAACAGTGCAAGATATTTCATC
CGATTTATTTTGCGTCATTTGTTTGAAATTGATGAGAAATCCTGTTCAAT
TCAAGTGTGGCCATGGAATGTGCTTTGTATGCTTCAAAAGCTTGCTACAC
CGCTCTAAACAAAAAGCCACAACACAATGTCCACAATGTCGTGAAGTTGT
CAAAGAAGGACAGATTGTATCAAACGTGATGTTGCACCGCATTATACTTT
CATTGCATGTGCTATGTGGTAACCATGACAACGGATGTAAATGGACCGGT
GAATTGGATCGATTTGATGAGCATTTCGCGCAATGTACGAAACACTCAGA
AAATGCAGCaaacaaaaagtccaaaaagaaaaagAAAAGAGCAGATCAAA
ATCAACAAGCACCACAAAACATCCAGAACGAGCTTCTCCTGCAAATCACT
GAACAGCTCTCAAACCTTAAAGAATACATTATCAGCCCGAACGCAACTAA
AACGCAAGACTCGGACCCAAACTCCACGGACGCCGCGATGAAACCACCGT
TCTGGACTAGATTTAACAATAAAAGTGTCACGTCTAGTCGCAAAACTAAA
ACATTAGCCTTGATCCTTTTCACTATATCCTTATTGTCTGGAATGCATAT
ACTGGGCGGAGGCTTCTCTGATTGGTTCATGGACGAAGACGCAACAGCCA
ATCAAACGCCTGGAATCGATCACGTGGCAACATACCAGCAAGTCCATAGC
GAACTGGCAAAAATGAATTCCCTAATATACGcacagcaaaacaatttttt
tcaactccATCTCGGCTCCAAGGAGCTACAATCGGACCTGGAAGCACAGA
AAACGGCGACACTCAGGCTAACGGGTTTATACTTGAAGAATAGCCTGAAC
GCGGCACATTTCACTAAGACCTCCATCGCAGATGATGTGGATGATGTGTT
TTCACAAGAGATGATGCACCGTAAATTAGGACTGGAACGAACGGCCGGTT
TCCAATTGGTCAACATGAAGGAAGATGCTTACGCAAGGTTGAAATCACTA
CAAAACCAATCGCTGGCCACACTGACTGTATTTAACGCTACCGATTTTTT
AACAccttttttgaaagattgtAAAGCATTCCAACGTGATTTCGCACAAC
AAATTATTATTGCCTTGACAACCAGTGAAAACTTAGTTACGCATTCTTTT
CAACAAGCTAGACGCAAGATGGCGTTTTACGTTGCTAAGGAGAGCGATTT
CACTGGATTTGATTATGAAGATGTTAAGAAACATTTAGTGGAAGAACGCG
AGAAAAGTGACGTCATCTTACGTGAGAAATTAAACGAGGCAAAACAAGAG
GAATATGTTCGAATGTTGAGACAAGAATACAATGCGTTAAATCAAACGTA
CCATGAAAtgttattaaaatcaatttcacAGTACGAGTTGGACGCGTCTT
ATCAAAATCGAGCAGCTTTCGTTTTTAGCCAacttgaaaatgttgatttt
ggaAACGGACGTTACTTGTGGAGAATGAACAGCTCCCTGTTACCTCTATT
ACCAACTGGACATGGGTACTATTCAGAGAAATTCACCACCATTGAGGCTA
AAGCACCGAACCAAGTTGTCACCTATGCTAAATTATGGTTATTACGTACG
TCGGTTCAAGATAACACATGGAAAGTGACATATGAGCAGTACGGTGATTC
TCCAGTGAGAATGAAAGTTTTAGTTGTTAATCAGAAGATGGATAAGGATT
TAGAATGTGTGGAATCGTTTCGCCAGACGAATGAAAAAGATGAGCTGATT
ATCGATTTTGATATTCCCTTCAGTTTTGAAGTTTTGGAAGAGAATGGTTA
TATTGTAGATGAGAAGATTTTGGTCAAAGCATATGTTGTATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002040-exon-sc0000018-1491911889:416919..417212 | TCONS_00002040-exon-sc0000018-1491911889:416919..417212 | Clytia hemisphaerica | exon |
| TCONS_00002040-exon-sc0000018-1510915933:416919..417212 | TCONS_00002040-exon-sc0000018-1510915933:416919..417212 | Clytia hemisphaerica | exon |
| TCONS_00002040-exon-sc0000018-1575043694:416919..417212 | TCONS_00002040-exon-sc0000018-1575043694:416919..417212 | Clytia hemisphaerica | exon |
| TCONS_00002040-exon-sc0000018-1491911889:417796..417844 | TCONS_00002040-exon-sc0000018-1491911889:417796..417844 | Clytia hemisphaerica | exon |
| TCONS_00002040-exon-sc0000018-1510915933:417796..417844 | TCONS_00002040-exon-sc0000018-1510915933:417796..417844 | Clytia hemisphaerica | exon |
| TCONS_00002040-exon-sc0000018-1575043694:417796..417844 | TCONS_00002040-exon-sc0000018-1575043694:417796..417844 | Clytia hemisphaerica | exon |
| TCONS_00002040-exon-sc0000018-1491911889:423723..423827 | TCONS_00002040-exon-sc0000018-1491911889:423723..423827 | Clytia hemisphaerica | exon |
| TCONS_00002040-exon-sc0000018-1510915933:423723..423827 | TCONS_00002040-exon-sc0000018-1510915933:423723..423827 | Clytia hemisphaerica | exon |
| TCONS_00002040-exon-sc0000018-1575043694:423723..423827 | TCONS_00002040-exon-sc0000018-1575043694:423723..423827 | Clytia hemisphaerica | exon |
| TCONS_00002040-exon-sc0000018-1491911889:424519..424584 | TCONS_00002040-exon-sc0000018-1491911889:424519..424584 | Clytia hemisphaerica | exon |
| TCONS_00002040-exon-sc0000018-1510915933:424519..424584 | TCONS_00002040-exon-sc0000018-1510915933:424519..424584 | Clytia hemisphaerica | exon |
| TCONS_00002040-exon-sc0000018-1575043694:424519..424584 | TCONS_00002040-exon-sc0000018-1575043694:424519..424584 | Clytia hemisphaerica | exon |
| TCONS_00002040-exon-sc0000018-1491911889:428012..428664 | TCONS_00002040-exon-sc0000018-1491911889:428012..428664 | Clytia hemisphaerica | exon |
| TCONS_00002040-exon-sc0000018-1510915933:428012..428664 | TCONS_00002040-exon-sc0000018-1510915933:428012..428664 | Clytia hemisphaerica | exon |
| TCONS_00002040-exon-sc0000018-1575043694:428012..428664 | TCONS_00002040-exon-sc0000018-1575043694:428012..428664 | Clytia hemisphaerica | exon |
| TCONS_00002040-exon-sc0000018-1491911889:431309..433182 | TCONS_00002040-exon-sc0000018-1491911889:431309..433182 | Clytia hemisphaerica | exon |
| TCONS_00002040-exon-sc0000018-1510915933:431309..433182 | TCONS_00002040-exon-sc0000018-1510915933:431309..433182 | Clytia hemisphaerica | exon |
| TCONS_00002040-exon-sc0000018-1575043694:431309..433182 | TCONS_00002040-exon-sc0000018-1575043694:431309..433182 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000018 | supercontig | sc0000018:416919..433182 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
|
