TCONS_00002049 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00002049
Unique Name	TCONS_00002049
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2727

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000018:576599..590893+
coding sequence from alignment at sc0000018:576599..590893+

transcript sequence

>TCONS_00002049 ID=TCONS_00002049|Name=TCONS_00002049|organism=Clytia hemisphaerica|type=transcript|length=2727bp
gcgaaggaacattcagaagccaaggtcgactaccactattCCACGGCACC
TATACTTATTTGGGTTATTATCATTTAGAGTCAGTCAGGGTTGCAGCTCG
AAacaaacacttttttgtgattttctcttaatagtCAAGTCTccgtagtt
tgtacaatataaataacCGTCAGAAAAACTTTCCTGGCGTGAATCTGTGG
AGCAGTGGTTAGAGTGTTGGGTTTCTGATCATTGGAACATTGTATTTAGT
GGGTTCTAATGCTACTGACGATGGCAATCTTTCGGAAAATCATTTTAAAC
AGtgttgaaaaacatagaaaatagcCCACAAAGttccaaaaagtcagaaa
aactacaaaCTAGAGACtgaaaagtacgaaataagtccaaaTGTGTCTTT
CACGTTTGTGAAGAAGCCACAACCAATCTCCAAGCGTACCTTTAAGTGGG
TCTGGGCTATATTCTAACTAGGACAGGGCCCCGGGCTTGAGGGCTGAAGT
AAGAAGGTCAAATATTTGAGTGACTTGACGTTACCTACCATGGTTGGGTA
ACAGAGAAAAATGTTTAACTTTAAGGATTTGAAAGGGCTGATTTAGGACC
CattttgaatcaattttttgttggGAAAGGCTACAGTATTTTGAAAACtt
ccataattttttttcaaattgattcGAAATGGGTTCGCCATGGActaaag
tgcttggaattttgcctGCCTGAATTGTTGGCAGTGGAAATAAGTCTTAA
TCTGTCTGAGACATCATATCCAAGATACCTTAGGTACAGAATAACAGTTG
CAAATGTATAAATCTGGCCATGAAAAATACCTTGTGCGTGCCAAAATAGC
ACTCTATAAAGAATATGTCATAGATTATGGCGTGCTATTAGCCCTTGCAA
AAGGGATTGTGTACATTCTGGTATATTTTAGGAGTGCTATTTTAGGTGTA
TGCCAGCATGTGCAAGTGCAATAGCACGCCATACACGGTCAGGCCTGCAT
AATGCTTACTTTTACATCAGTTTACATATATATTTTAAAGATTACAAATA
ATTAGTCAAAATTGACTACCTAATACCATCAAGTCTTCGGAGCTTACTGA
CTAAAGGCAACAAGGAACACAAAATGGAACATCGACCTTATGACATTATT
GTTTATGGAGCTTCTGGTTTTACTGGACAATTTGCTGCAGTTGAAGCTGT
TAGAACTTGCAAAGGAAAGAAAATTGGTTTAGCTGGAAGAACAAAAGCCA
AGTTACAGGAAGTtgttaaaagaattgaaaaagaattagGAAGTGACTGT
GACCCAACAGATATTGGTATTGTTGTTGCTGATAACAAGAATGAAGAATC
TATCCGGGAAATGTGCAGACAAACCAAAGTTGTTGTCAACTGTGTTGGAC
CGTTCCGATGGTATGGGGAGCTTGTAGTTGCTTCATGTGTTGAGATGGGA
ACAAATTATGTTGATATCACTGGCGAACCTGAGttTATGCAGACATGTCA
AATTAAATATCACAAAGCTGCTGAAGAGAAAGGTGTTCACATTGTCAGCG
CTTGTGGATTTGATAGTATCCCTGCTGATATGGGTCTGGAAATTCTTCGA
GAAAGATTCCCAGGTGTTTTAACAGCAGCAGAGAGTTACATCCACATCAG
ATCTAAAAGAGCTAATTATGGAACATATTTGACCATTATCCACAGTGTCC
AAAATCGCAATTCAGTAAAAGATCAACACAAAACCATCTTCAGACAGAAA
ATACCTTACACCGGACCAAGACTTCGTTTGAGAAATGGTGGATTCAGCAA
CTCTGAGAATCGTTGGTTCATTCCTTTCCTTGGTGCAGACCCCTCAGTTG
TCAAGAGAACTCAATATCATGAATCGATGGTTCACGACCGAATGCCAGTC
CAATATTTCGCTTATTTCACAGTACCGtcaatcttttacatgatctgTTT
TGCTATCTTTGGAGTTGTTTTGTTTGTGTTGACCAAATTTTCTTTTGGTA
TCAAATTGTTGGAAAACCATCCAAAATTCTTCACTTTTGGTACGTTTTGC
AAAGAAGGACCAACAAGGAAGGAGATTGATGCGGGaagtttcaaaattgt
ttttcatGGAAAAGGCTACAAGAAAGAACCTGAATCAAGGACAAGTGCAG
GAAGACCTGATCAAAGCATGTCATTGAAGTTCTCTGGACCAGagGCAGGA
TACATTTTCACTTCAACGTGCGTCGTCGCAGCTGCTGCTACCATTTTAGA
TGACAACCTCATCAACAAGGGTGGTGTTTTGACTCCTGCTTCAGCTTTCC
GAAAGACCAAATTTGTTGAACGATTGGAAAAACGAAACGTCAAAATTGAA
GTGATGAATTAAAAGAGATTTGGGGCCCAAGTGGAAAATCAATACTAAAG
CCTATACTAAGGCCTATGTGGTACTCCTATTTCTTCTGCattaaaaagta
tttaaaatgattttgatatttAGTTTGTTTCTTGCAATTTTAGAATTTAG
ACCTTTGTTTTTCAATGCAGCTCGTTTTATACTGCATTATCTTgaagtta
attaaaaaaaaaggtttttgtagggataatttataatttgaaatgatttt
taatTACGTGCGTTCGTACAGATTTGATTATGTATAGTTTTTGTCAATAT
CAAAATACAGTATTTTCTAGCATTCACATTTTATACAGGTAAATCTCAGA
CCAAATATATCAACTTTTACAAATCCG

Run BLAST on NCBI

protein sequence of TCONS_00002049-protein

>TCONS_00002049-protein ID=TCONS_00002049-protein|Name=TCONS_00002049-protein|organism=Clytia hemisphaerica|type=polypeptide|length=412bp
MEHRPYDIIVYGASGFTGQFAAVEAVRTCKGKKIGLAGRTKAKLQEVVKR
IEKELGSDCDPTDIGIVVADNKNEESIREMCRQTKVVVNCVGPFRWYGEL
VVASCVEMGTNYVDITGEPEFMQTCQIKYHKAAEEKGVHIVSACGFDSIP
ADMGLEILRERFPGVLTAAESYIHIRSKRANYGTYLTIIHSVQNRNSVKD
QHKTIFRQKIPYTGPRLRLRNGGFSNSENRWFIPFLGADPSVVKRTQYHE
SMVHDRMPVQYFAYFTVPSIFYMICFAIFGVVLFVLTKFSFGIKLLENHP
KFFTFGTFCKEGPTRKEIDAGSFKIVFHGKGYKKEPESRTSAGRPDQSMS
LKFSGPEAGYIFTSTCVVAAAATILDDNLINKGGVLTPASAFRKTKFVER
LEKRNVKIEVMN

Run BLAST on NCBI

transcript from alignment at sc0000018:576599..590893+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00002049 ID=TCONS_00002049|Name=TCONS_00002049|organism=Clytia hemisphaerica|type=transcript|length=14295bp|location=Sequence derived from alignment at sc0000018:576599..590893+ (Clytia hemisphaerica)
gcgaaggaacattcagaagccaaggtcgactaccactattCCACGGCACC
TATACTTATTTGGGTTATTATCATTTAGAGTCAGTCAGGGTTGCAGCTCG
AAacaaacacttttttgtgattttctcttaatagtCAAGTCTccgtagtt
tgtacaatataaataacCGTCAGAAAAACTTTCCTGGCGTGAATCTGTGG
AGCAGTGGTTAGAGTGTTGGGTTTCTGATCATTGGAACATTGTATTTAGT
GGGTTCTAATGCTACTGACGATGGCAATCTTTCGGAAAATCATTTTAAAC
AGtgttgaaaaacatagaaaatagcCCACAAAGttccaaaaagtcagaaa
aactacaaaCTAGAGACtgaaaagtacgaaataagtccaaaTGTGTCTTT
CACGTTTGTGAAGAAGCCACAACCAATCTCCAAGCGTACCTTTAAGTGGG
TCTGGGCTATATTCTAACTAGGACAGGGCCCCGGGCTTGAGGGCTGAAGT
AAGAAGGTCAAATATTTGAGTGACTTGACGTTACCTACCATGGTTGGGTA
ACAGAGAAAAATGTTTAACTTTAAGGATTTGAAAGGGCTGATTTAGGACC
CattttgaatcaattttttgttggGAAAGGCTACAGTATTTTGAAAACtt
ccataattttttttcaaattgattcGAAATGGGTTCGCCATGGActaaag
tgcttggaattttgcctGCCTGAATTGTTGGCAGTGGAAATAAGTCTTAA
TCTGTCTGAGACATCATATCCAAGATACCTTAGGTACAGAATAACAGTTG
CAAATGTATAAATCTGGCCATGAAAAATACCTTGTGCGTGCCAAAATAGC
ACTCTATAAAGAATATGTCATAGATTATGGCGTGCTATTAGCCCTTGCAA
AAGGGATTGTGTACATTCTGGTATATTTTAGGAGTGCTATTTTAGGTGTA
TGCCAGCATGTGCAAGTGCAATAGCACGCCATACACGGTCAGGCCTGCAT
AATGCTTACTTTTACATCAGTTTACATATATATTTTAAAGATTACAAATA
ATTAGTCAAAATTGACTACCTAATACCATCAAGTCTTCGGAGCTTACTGA
CTAAAGGCAACAAGGAACACAAAATGGAACATCGACCTTATGACATTATT
GTTTATGGAGCTTCTGGTTTTACTGGACAATTTGCTGCAGTTGAAGCTGT
TAGAACTTGCAAAGGAAAGAAAATTGGTTTAGCTGGAAGAACAAAAGCCA
AGTTACAGGAAGTtgttaaaagaattgaaaaagaattagGTAAGGGTTGT
TTTCAGCTGAACACATAGGAATTTTTGACGTGTAATTtagatttcctttt
tttttacttctcttttcCAATTTTATTGCATGATCATTGCTGGTGTAAAG
ATTTGAANATAATTTaaatttcctttatttttacTTCTCTTTTCCAATAT
TATTGCATGATCATTGGCTGGTGTAAAGATTTGAATATTAAGCAATTGTC
AAAGTACCTTTATTTCCTTACCATAAACTCAATATCATATTGTGCTCTGT
AAAATTAAATTATTCAAACTATATATTATTCTAGGAAGTGACTGTGACCC
AACAGATATTGGTATTGTTGTTGCTGATAACAAGAATGAAGAATCTATCC
GGGAAATGTGCAGACAAACCAAAGTTGTTGTCAACTGTGTTGGACCGGTA
AAATTACACCCaagattttttatctaattttatttcaatgaagTCAGTAG
CTATCATAGATTAAAACTTTTACAATAGCAAgtgattttttgattgaaag
gtgATGAATGATAAAAGGATACAGCCGTGCTGCAAATATATCAAATAttg
gcaataaaatttttaacattaaTTGAAATTTGTGTGTCTATGAATGTGCT
ATTCAAGAAATAGTCTGTATCCTCCAGGGGGATTACCTTTCCCAAAAGAG
ACCTTCTCAACGGGGGTACCTTTCCCAAAAGAGACCTTCTCAACGGGGGT
ACAAGTTTTTTTCTGGGATAGCCCAATGATAAAGTCTATCACTCCAAATG
AATCGTTTTCTTTTACACTACACAATATGCTTGTGTATGTTACATGGCTC
CATTCAACCCTTTCATTcccttttttcatcttcaacaTTTTATCTTAGTT
CCGATGGTATGGGGAGCTTGTAGTTGCTTCATGTGTTGAGATGGGAACAA
ATTATGTTGATATCACTGGCGAACCTGAGGTTAGTACAATGTAAACAAAT
GTTTAAATCTNTTGATATCACTGGTGAACCTGAGGTTAGTACAATGTAAA
CAAATGTTTAAAATCTTTGCATATAatctttataaataaataatagcTAG
GactttttcccaatttttgatATAGGTAGAAAGTTAGGCTAGCACTTTTC
AAAATAGTACAATTGaatgttttttctttaataaaGTAATAATGATAATC
ACGATAATTTTCCTGAAAAGTTTCCAAGGTAAATCTGTTTTTTAATCCCT
TACCAATTAAACTAGTTGGGATGATTTTCATTTGGTAAAGAAagaacaaa
tattttgaaaaggaaaaagagagaaaaattctAAGCAATCATgctgcttt
tctttttttccagttTATGCAGACATGTCAAATTAAATATCACAAAGCTG
CTGAAGAGAAAGGTGTTCACATTGTCAGCGCTTGTGGATTTGATAGTATC
CCTGCTGATATGGGTCTGGAAATTCTTCGAGAAAGATTCCCAGGTACCCC
TGTGATTTGTTTTGCTCTCCCTCTCTCAGTACTCCATTTTTTTCAATCAT
AGggcaatattatctcttttcaTCCTGTTTCGTATAGACCTACCTAAAGC
TCAAATGAATTAGCTAATTAATGTTTTAGCAATTAGCATTTTATTGAGAT
TGGTTTGGTATGGGCTCGTTATATAATAGCATTatctttgattttgtttt
aagGTGTTTTAACAGCAGCAGAGAGTTACATCCACATCAGATCTAAAAGA
GTAAGAATAGCTCACTTCCAAAGATAATCTTCACTCAGTTGTTTTCAATT
TATTGGAAGCCACGTGTTTcagtatttttgtaaaatctttaattttaagg
AGTGAATACATTCAATAGCAATAATCTCGAAAATAAATCGTTTTTAGGCT
AATTATGGAACATATTTGACCATTATCCACAGTGTCCAAAATCGCAATTC
AGTAAAAGATCAACACAAAACCATCTTCAGACAGAAAATACCTTACACCG
GACCAAGACTTCGTTTGAGGTATACCCTAGCAATATATTTTGATAGAAGT
CCATAGTTCATATTGATTATAATAACAATCATCGTGGTGTCTACGgcacc
ttgaaaaccttgaaaaccttgaaattggactaagcaaccttgaaaacctt
gaaattgtAATAATGTgaaagaattctttgaaaaccttgaaaaagcaTGA
TTGTGACAGTATAGTAGTCTTGTTTTGGATTGGGTCCTCACTGAAGTTTT
GGCTAATGCTAAAGCTCCAAAAAGTTTCTTGCTCGCATTGCTCACAATCA
TTTTTTATGGACCAAATGCTGGTAATAGCATCTCACGCACCTCGTCAAGT
ATGGTGATATCGTACTATTTAAATCAGTTTGAGTtctgaaaaaccttgaa
aataccCAATAaatagtccaaaaaaccttgaaaaaaatcgctaaaatatt
gccataaaaaccttgaaaaccttgaaaatcatGGAAAAATGTCCGTAGAC
CATTTGGCCATTCCATTGTATATCCATACAGGgcgtggacgaacatttcc
agagggtaatccaagaaaattttccagtgggtgttttatttttccaaggg
ggtaaaaagttattctaaaatttccagggcgTAAAAGACTaatttagttc
gtccaccctcactttaaggtatgaaaagaatttttccgcTGGGGGTAAct
acacattttcaataattctttTCGACTTGAAAAAGTTCGTCCACCCCTGT
ATGTTTTTTTATTAATGGAACAACCCATTATTTAGTAATAGGTATATCAA
AAAAGACCTTTAAAGGTTCTCAGCTTCTTAACTTGTATTAGTGTATGTTA
CCATTAATTCTAATTAAACTtatttatttgttgtttttttattctagAAA
TGGTGGATTCAGCAACTCTGAGAATCGTTGGTTCATTCCTTTCCTTGGTG
CAGACCCCTCAGTTGTCAAGAGAACTCAATATCATGAATCGATGGTTCAC
GACCGAATGCCAGTCCAATATTTCGCTTATTTCACAGTACCGtcaatctt
ttacatgatctgTTTTGCTATCTTTGGAGTTGTTTTGTTTGTGTTGACCA
AATTTTCTTTTGGTATCAAATTGTTGGAAAACGTAAGATATTGTGTAAAC
TTGTATTGTGTAAACTATATTTCGGTGACTTTACTTTTTAaggaaattta
gtttttttaaagactcttatgtatggaatgcttttaaatttttttcgatt
ttttattcAAGACACGATAAAATTCAGAATAAGAGAAAAGCTTGAATTAT
CTTATGAAATACTCAAGTTTTATAATGGAATTTGATTTTTACTTGTGGTT
GTTGATTTTAGCATCCAAAATTCTTCACTTTTGGTACGTTTTGCAAAGAA
GGACCAACAAGGAAGGAGGTATAATAATGATgagtcaaaactttttttaa
aatgtagaacttaaagtttcatgcttacaatcatcagctacataTGATAC
AAGTTTGATctaattgaaaaaattcaaaattcaaacattGCTAGAATCGA
CAAGTCGTAAAAAATTAATAAgtaattagaaaaaatataaaataaaatta
taattcCCATGTGAGCAGCTATGTCCAGTCTTTTGTTTTATAATGTTTGA
ACATAAATTTATTCATGTGACGACATTTAGAAACGATTTCGGATCTTTTG
TTAAGCAATTCGTCTTTGTTTTCGAATCTCaggatttctaatttttcctg
TAAACAAAGGCGGCACATTTTAGAAGTGTTAGAGTAGGATTTGACCCGTT
TTTGGATGGACCATTTTAACGTCGGGAcaatattcttttcttttaaggCC
CAAATATACGTAGACAGGGTTGTACTGTTTTTGTACTTAGCGTTGTTGAT
AGATTGCTTGTGTTCATTATATCGCTGCTTGAATTCTCTTTTGGTAAGGC
CGATGTATGATTTCTTATCATGATTAGGTGCTGTAACTTCGCATTTATAT
ACAATGGATTTGGTTTTGCATTTGTTTTGTAACGGACATGCATTTTTATT
ACGACAGTTGCAATGTTGGTCGTTGTCTTCAGGTTTCAATAACATCTTTT
TATTGTGAGAGTTTATAATAGAACGGACGTTTTCGGTACAAGAGTAGCTC
ACTTTGacattgtttttgttgaaaactgAATATAGTTTGTTTgcttttgt
aaaatgtttatCAATGAGTTTTAGGAAGGTTTTTCCTACATTTGTTGAGA
CGTTTTTGTTGTACGGGGGGTTGAACCATATAACTTTTCGCTTTCTTGAT
CGACGGTTTTCTGTATTTTGGTAGGTATTTTCATATGATAAGTTGATGTT
TTTGTAACCACTTGCTTTTAAAGCTTCTTCGTAGATAGGTTTGGCTTGAT
TGAAAATAGTTTCATTTgaggagttttttgaaagtctcttgtTTATGGAA
AGTGGCAGTTGCTTTATAATATTTTGAGGATGGTTTGAAGATGTGTTTAC
ATATGAAAGGGTATTATTCGGTTTTTTGAACGGTCGGTAAGTACCTGTGT
TTAGATCAAGTGTCAAATCGAGAAAATCAACGGTTTTCAAGTTAATATCG
ATTTCAATGTCAAATcctatgtttttgaaaattgaggGATTGTGCGAGGG
CCCGGAGGGCCCGAAGGGCAATCCcgattttatgaataaaatcgAAGCCA
ACGATCTGATGTGGGTACGCCCTACTCGCCGTCATGACTGAAGGTCATAA
TTTCAACTAAGGGTATAAAGATGTACAGTACTAACAAAAGAATTAATTAA
ACAAAATATGGGATAGAAATAAAGTGAAACAAGCTTCGATTGGTTTTAAG
GTTTCTTTGCCAGGACCACAGTTGACTGGCTTAAAGAgctattaaaaaaa
tgttacaaTGTTTAAAATGATTAACCACTGCCTCGTCCACGGCCACGTCC
ACGAAAGTTGGTTCCTGAAATGTACAAGCAAGATAAAGAATATATATGAG
ACAGGGAGGAGAGGGAGGGCACATCAGATCGTTGGCTTcgattttattca
taaaatcgGGATTGCCCTTCGGGCCCTCCGGGCCCTCGCACAATCCCTCA
TTTCATTTCATAAAATCTCCGCCCGATCTGATGTGGGTACGCCCTACTCT
TGTATGACTGAAGGTCATAATTTCAACTACCTCTGTTTGAAGCTTTTTAA
AATCGCACCTTGGAACGAATCTTTAATTACACTCCCTGAATTAttataaa
acttttgaaaagtacTTTTATTCGACCAGTGGGCAGATTTCATAATATCC
TCCACCGAAAAACCATTCAAAGAAGCCTTTGAGGTAGAGGCCGACCTAGT
AGAGTGGCCctgaaaaacttttgaatcaATGCCTGCATTATGGATGACTT
CTTTTAACCATCTAGAAACAGTAGATGTAGCGACTTTATCGTGAGGTTTT
ATTGTGGCAATAAGGAGTTTAGATTCATCACCCCTAAGAGGCTTAGTCAT
TTCCAGATATCTATCCAAAGCCTTAACAGGGCACAAGGCCTTATTATCTT
CAAAAGACTgaaatttcaactttaaatGTTTGTCACCAGGCTTTTGAGTT
TTTGTAGGATTTGGAAGTGTAAAACTATAAAAAGAGTTTACCCTCACCAT
GTAGGAGGTGTCTAACTGCCAAATTTCAGAAGCACGAGAACCTGAGCACA
AGGCTAACAACATAACTAACTTATGTGTCATAAGACCAAGATTTCTCGAG
TCCAACACCTCTAGATAATTTAAAACCTGGTCAACATCCCAGATAAAGTT
GTATTTTGGCTTGGGGGGACGCTTGTTGAAGATCCCCTTCATCAAGGCAG
AAACTCTTGGATGCATGCCCACTTTACTTCCGTCTATAGGCATGTGGAAG
GCCGAAATTGCAGACCTATAACCACCTATTGTGCTGAACTCCCTACCTTC
CTTAAATTGGTCAGTTAGGAATTGCAAAATCAGATTTAAAGGACATCTAA
AGGGATCAGCTTGTTGGTCACTACACCAGCGACAAAACTTTCTCCAGGCC
GATTCGTAATGAGAAAGAGTTCCCTTCCTTCTAGAGTGTATGATAAGGTT
GGCAGAGTCTTCAGATATTCCTTCTGCACTGAGGTTTGCCCGGATACTGT
CCATGCCACCAGTTGGAGGGAGTTGTTTAGACACAACGGATGACACTCCC
CCGCTGGATTCTTTAGCAGTTGTCGATATTTTGGTAATAATATTGGATTC
CTTATCGACATTCTGAGTAGTAAAGGGTACCATGGCTGGGATTGCCAAGC
AGGTGTTATGAGAAACAGGGTTGCTTGATCCTTCAGCACCTTTTGTAGCA
CACGGCCTATCAGGGAGAATGGTGGGAAAGCATACCCCCTCAGAGGCCCC
CAGTCCTGTTGAAATGCATCTGTTCCCTGGCTTTTGTGATCCAGTCTCCA
AGAGAAGAACTTTTGGAGTTGGGTCGTTACTCTTGAGGCAAATAGATCTA
TCTCTGGACGACCCCTCACCCAAGTCATTTTTTGAAACACTTTGGGATCT
AGTTTCCATTCGCTTCGATCCTTCCTTCTTGACTCCTTGTCTGCTAGACC
ATTCAAAATCCCGGGAAGGTATTCCACAGTAATCGTGATCCCGTATCTTA
GGAGGAACTCCCAAAGGTCCTTGCTTATCTGGTTCATTTCGTGGTTCACT
GTACCCCCCATTTTTAGGATGTAAGCTAATGCTGAGATGTTGTCCATCTG
GAGATGAACTGATGTTGGTTTTAACCTGTCTGCAAAAATCAATATGGCCA
TCTGGGCCCCTTTTAGTTCCAAAATATTTATATGTTTCACTCTCTCTTCC
TCTGACCAAAGACCCCCTGCTGGTTGGCCTTGACAGACTGCCCCCCAACC
TGTCTTGGAGGCATCTGACTGGACGACTATTTGTGGGGGTTCCATTACTA
GGGTCCTCCCATTGACAGATTCTAGATTCTGAATCCACCAAAGTAATTCC
GACCTTGAACCCTTGTCCAAGGACAAGACTTTTTCGTAAGAATTCTCCAT
TAGGAGGTGTTTTATTTGAAGTCTCTGTATATTTCTGTAGTGAAGAGGGG
CTGGAAGTACTGCTACTGCTGCAGCTGTCAATCTCCCTAATATCTTTGCC
AAATCCCTCACAGAAACCTCCCCCTTCTGTAACAGATTCTTGCAATGTGT
TTTTATTATTGCAACCTTGTCCTGTGGAAGAGATATCTTCATATTGACTG
AGTCTACAATTACCCCAAGGTACTCTAGTTTTTGGCAAGGCTCTAACACT
GATTTTTTCATGTTGATTACAAAACCCAAATTCTGTAAAAGGTAAATCAA
GGTATCCCTCAAAGCTATCAATTCCTCCTTGGACTGAGCTAGAAGAATAA
TGTCGTCCAAGTACACTATCACTCTCCCATGCAAGCGTCGAATTATTGCT
ATCGGGATTTTCATAAGTTTTGTGAACACCCAAGGTGCTGATGAAAGGCC
GAAACATAGGCAAACAAACCGATAAAGTTTTTCTTTCCAACTGAAACCCA
TATAATCCTGAGACTCTTTGTGGAGAGGGACCACAAAGTAAGCGTCCTTG
AGATCGATTTTCACCATATAATCGCCCCTCATTAAAAGATCTTTCAAGGA
GTGCAAACCCTCCATTTTGAAATGCTCCTGGGGAATGTATGAgtttaact
ttttcaaatttatgacTGGCCTTTGACCAGAATCCTTCTTTTCTACCAGA
AAAATTGTACTGAAAAACTTTCCCTCCCCGGGCTGAATTTCCTGGATAGC
ACCTTTCTCCAAAAGGGATTTGATCTCCTTGTCCACTAGAGTCACTTCCT
TTTCTCCCATTGGAATCTCCTTTGGAGGCATTCTCTGATGAGGCTGAGCA
TTTAAAGGCACCTTGTACCCTGAAACAATATTCAAAATTGCCCGGTCGTT
TGTCAAAACTTCCCAATTTTTTAGGAAGTGTTTTAGCCTTCCTGCTAATG
CTAATGGAATGTCTCCCGGGCTTTCCTTTGAGAAAAGAGGCATCACTAAT
GGATGAACCCTGGACTTTTGAGGCAAATTCAAGAAATGGTTTTCCCTTAC
CTCTGTTATTTCCTCTGTAGTTTCCTCTGAATGAAGAGAACTGAAATCTT
GGCTGAAAACTGCCTCTTTGACCGCCTGACGACTGCCCCCTACCACCTCG
GTAACTTGTTGGCAAGGGGCCTCTCTGAAAGGGCTGATTTGAACTTGAAC
CTGCCTTCATCATTCCTTTAAACACATCTTTTGACTTCTTTTTCGTCTTT
GCACTTCGGCAAATTTCTTCCTCAAATTTGTTACCAAAAAGATCCTTTGT
TGTGTTTTCTGAGAGGGTTGTCTCCCAATCTCCCAGCATTACTTTTGCTC
TCTTATGGTCTGAGAAGAGGCTTTCTAGAATTAAATGCCGACGGTAGTAC
GATGTTCTCTGAGAAGCTTGCCCTACCAGAGCAGTGACTGCATCTAACGT
TTTACTTATAATTTCCAGCCTCTGGAGTTCTGTTTTGGATTCCTCTGAAT
CAGTGTCCCCAGACGACATCAAAGCCTCTCTCTCATTTGCCACAGAAATC
CACATCTGGGACACTGGGCCCATTATACTCCGGATGGATTGTTGAATATG
AGTCATATAGCCATCGATACGTAAGGTTTTTGCTTTACCAAAAGTTTCAT
TCACAAGCTCTTTAATGTAAATGTCTAGCTTGGGAGGCTTGTCGACGTTT
GAAGGTACGGGACAGTCCGTTAAAATCTTCTCTTTTATAGATTTGTCACT
AAAATGTTTGGTCAGGTATTTACGAGCATAATCTTCCAGTTCTTTTGGTA
GGCTCACAGATGAATCCTCATCCTCTTCATCTAACTCCACTCTTGGCATC
TTCTCAGGTGGGGCAGAAGTCTCTTCCTCATCTTCTTCCCTTTCTCTTCG
GCCATTTCTCCTGAATTTCAAATTGGAAAACATTATCAGAACTGCCCTAA
GCAAATTCCTTGTTTCATTATCTTTCACTACCTTCTCTCACCGAGTGAAG
AGAGGAATAAACTCAAAGACCTCTCCTAGAGAGTCTAGTTTCATGTAATG
AGTGACCCTGTGTCCACTGCCTAACAGTGGAATAAGGTCCTCTTTTAAGG
GACTGTAAATTTAGATATTGACAAAATACACAACAATGGTGCAACACCAA
TTGTTATTATAGCTTTTCCTAGATTATGATAGGGTTGCCAAAGGCAAAAC
CACAGATATTTAAGGAATTTTAATGATCAATTTATACTTACAAGGAATTT
GCGTCCGACATCTTTAGCGAGTAGAAAACAAGAGGTAGTTGAAATTATGA
CCTTCAGTCATACAAGAGTAGGGCGTACCCACATCAGATCGGGCGGAGat
tttatgaaatgaaattcGACAATCTTTTGACGGGTAGATTCAGCGTCTTT
TCTTGTCAGGTTACGGAATATCATTAAACCATCGTCACGATACAAACCAA
TATTACGCTTGTCAGTGATTTGCGAAAGGTTGTTCAAAATGTAAATACCG
ACAAGTTCACACACTTCAGCACCATCGTAACTTCCCATTGTGACGTCGAA
GCAATCGTGAGATTTGTTCTTTTTCCATGATACGTTGTTTGAAAAGAGAA
GGGATTTACGGCAGTGATTGATTGTTCTGAGATCATTTTCTGAAATTGTT
GTGTGTTGCATTGCGAAATTTAGTGCGTTGTCAAGTATTTCTTTAGTGAT
ATTTGGGTAAAACTCTTTAATGTCCATTTGAATAAAGGAgtgttcatttt
tattttcgatgGATGAAAACCATTCGATGACTTGGTCGGAATTCTTCCAT
TGGTTAAAGTGAAGGATGTTACGAAGGTCTGTATTGACTCTGTCTAGAAT
AGATTTACTGATTGCACCAAGTTCACTTTTGCATGGGTTGATAAGACGAC
AGGGTTGTTTTTGGTGGAAGTTTNGCCAATGTTAACTTTTACATGGGTTG
ATGAGACGACAAGGTTgtttttggtggaaatttggTTTATGGTCTTTCAG
CGTGATAAAAGCAGGTGAAGGTGCAAGAATTTCTGCGCGTTCGTGGACTT
TGTATGAGACTGCTATGTGCTTTGCTTCGTTGTTGATTGCAGATTCGAGA
TTGATGGGtgctttttggtaattttttgttacattttcgCGAAGCAATTT
ATTGTGTTGATCGGCAGGCATTTTGTATATATTTGTATATATTTGaggtt
ttgtatatattttgttttgaggaaGGAGGTATATAAATATCAATTATACA
TTTCAggtaaaaagcaaaaaaaagtcttCTCGATTCTTGATCAACTTTTA
ATAAATAGAACTGAATAATGCTGGCAGCCTTGTTGTGACTCTTACCCAGT
GTCAACATAGTTTCATCCCCGTATGTTTAGGGGGGTTCTTCAAATTCCTG
TTAGGGAGGGGGTTGAAAAACTCCCAATTATTAGAGAGAGGGGGGGTATG
GTTATATAGGGGGGTTTAGAAATTTTTACCAAataaatttatcattttca
gtGTCATTCCCGTCGATAATTTTATCCCAGGGTTCACGACCTTGGTTATT
AAGGGGAGGATCTGAGAAATTTATATATAGGGGGTTTGGcctttaggggg
ggggggggttggttAAANATTTTATCCCAGGGTTCACGACCTTGGTTATT
AAGGGGAGGATCTGAGAAATTTATATATAGGGGGTTTGGcctttaggggg
ggggggagttGATTATATAGGGGGGGGCTTGAACCACCCAGGAAACTATG
GTCAATACAAATGTtctaaagctttaaaatgtcaatCTGATTTTAGATTG
ATGCGGGaagtttcaaaattgtttttcatGGAAAAGGCTACAAGAAAGAA
CCTGAATCAAGGTTAGTGGCGTTTTTACGTGAAGTACTTGAAAGCTACTG
CACTACTCAACCTAACTAACAGACTTTGTGAAAAGGAGGTCAAGCCATGA
TTTAGACTTGAATCGCTATTAAACGctgtttggttagatattcccgcttc
taaatcaagttttgttcgttagtagttgatacattattttcagggcttac
ttcctactgtttgtacataaaagttatctttaaagttctatttcaatgtt
cttaagttatcaaaaatagcgaataaatttttttttccatccggccgcat
gagagcttttttccttcacccgcattccgaaaacactacattttttactT
TCGTCTTACTTCATCATTTTTAGGACAAGTGCAGGAAGACCTGATCAAAG
CATGTCATTGAAGTTCTCTGGACCAGGTATTATTCTATTTTGTATCTAAA
CAGTGCTGTGTTTATTAACCAGATAGGATTGGCGTCAAATGTTGATAGCC
CTTACATTGGTTTTCTCATAGTCACAGAATTTTGATGTCATCTTCCCTTG
GTAAACTTTACCCAATCCTTTCGTGGCTGTTAGAGGTTGAAAAGTGTAtt
gtttgatttgatttttagatACATTAATCCGTTTTGGAAAAGAAAACAGC
TTTAGTTTAGAATTCAACCCCCACCTAAGGAAACCAAGGACTCTTAtact
aaaaaaaaatcaaaacattgagcaGCAGAATCATCTGACAGTTTTCAtct
taattattatttttcagagGCAGGATACATTTTCACTTCAACGTGCGTCG
TCGCAGCTGCTGCTACCATTTTAGATGACAACCTCATCAACAAGTAAGTT
CACTCATTGATTGGTTGTCATTTATCCGATGCAACTGGGGTGATGAAATG
ACTAACAATGTTGAATCACTCTNATCATTTATCTGATGCAACTGGGGTGA
TGAAATGACTAACAATGTTGAATCACTCTTGAGAGCAATCTATCTCTCAG
CTTGTCACTCAACATCGCCAATATCTCATGGCTATGTTACGTCGCAAGCA
CTTGGGTCAAAAGTGTGTTGTGAATGACTACTCCATGATTAGTCTATGCT
AGAATAGGCGATTATCCTGGGACAGGGCCCGCAAGGCCGACCACCCTTAC
TTTAATTATCTTCCTCCTCACAGTTAGGCATATAATTTATATGACAATAC
TGTTTCGAATTCATGTTGCGAATTAGACTGTTACATTagatttccataca
ggggggggggttgacgaaccttttcaaggcaaaaagAGATTCTGGAAAGT
GACAAGACTTTCAAAAGAACCCCTGGAAAGATTCATTTCCGACCTTAAAA
GTGATgatggacgaactaaaatcagtcttttaccccctggaaatttaaga
ataaactttcaccccctggaaaaatgaaaaaatattcctttatacccctg
gaaattcttctccgattacctcctggaaatgttcgcccaccccctgtatg
gatataaaatggaatgccCTATTCCGTTTAGGATACCTTTAGCCTGATAA
TTCGGCGGGTTTTTGTGGCGTAAAAgtaatttgttaaaaaatgtcTTTAA
TTACTTGAAGAGATTTATGAGCGACTCAAATAAATAATGTTTTCATGGAA
ctaaattgcaatttttaactCTTCATTTATTTACAGGGGTGGTGTTTTGA
CTCCTGCTTCAGCTTTCCGAAAGACCAAATTTGTTGAACGATTGGAAAAA
CGAAACGTCAAAATTGAAGTGATGAATTAAAAGAGATTTGGGGCCCAAGT
GGAAAATCAATACTAAAGCCTATACTAAGGCCTATGTGGTACTCCTATTT
CTTCTGCattaaaaagtatttaaaatgattttgatatttAGTTTGTTTCT
TGCAATTTTAGAATTTAGACCTTTGTTTTTCAATGCAGCTCGTTTTATAC
TGCATTATCTTgaagttaattaaaaaaaaaggtttttgtagggataattt
ataatttgaaatgatttttaatTACGTGCGTTCGTACAGATTTGATTATG
TATAGTTTTTGTCAATATCAAAATACAGTATTTTCTAGCATTCACATTTT
ATACAGGTAAATCTCAGACCAAATATATCAACTTTTACAAATCCG

Coding sequence (CDS) from alignment at sc0000018:576599..590893+

>TCONS_00002049 ID=TCONS_00002049|Name=TCONS_00002049|organism=Clytia hemisphaerica|type=CDS|length=1239bp|location=Sequence derived from alignment at sc0000018:576599..590893+ (Clytia hemisphaerica)
ATGGAACATCGACCTTATGACATTATTGTTTATGGAGCTTCTGGTTTTAC
TGGACAATTTGCTGCAGTTGAAGCTGTTAGAACTTGCAAAGGAAAGAAAA
TTGGTTTAGCTGGAAGAACAAAAGCCAAGTTACAGGAAGTtgttaaaaga
attgaaaaagaattagGAAGTGACTGTGACCCAACAGATATTGGTATTGT
TGTTGCTGATAACAAGAATGAAGAATCTATCCGGGAAATGTGCAGACAAA
CCAAAGTTGTTGTCAACTGTGTTGGACCGTTCCGATGGTATGGGGAGCTT
GTAGTTGCTTCATGTGTTGAGATGGGAACAAATTATGTTGATATCACTGG
CGAACCTGAGttTATGCAGACATGTCAAATTAAATATCACAAAGCTGCTG
AAGAGAAAGGTGTTCACATTGTCAGCGCTTGTGGATTTGATAGTATCCCT
GCTGATATGGGTCTGGAAATTCTTCGAGAAAGATTCCCAGGTGTTTTAAC
AGCAGCAGAGAGTTACATCCACATCAGATCTAAAAGAGCTAATTATGGAA
CATATTTGACCATTATCCACAGTGTCCAAAATCGCAATTCAGTAAAAGAT
CAACACAAAACCATCTTCAGACAGAAAATACCTTACACCGGACCAAGACT
TCGTTTGAGAAATGGTGGATTCAGCAACTCTGAGAATCGTTGGTTCATTC
CTTTCCTTGGTGCAGACCCCTCAGTTGTCAAGAGAACTCAATATCATGAA
TCGATGGTTCACGACCGAATGCCAGTCCAATATTTCGCTTATTTCACAGT
ACCGtcaatcttttacatgatctgTTTTGCTATCTTTGGAGTTGTTTTGT
TTGTGTTGACCAAATTTTCTTTTGGTATCAAATTGTTGGAAAACCATCCA
AAATTCTTCACTTTTGGTACGTTTTGCAAAGAAGGACCAACAAGGAAGGA
GATTGATGCGGGaagtttcaaaattgtttttcatGGAAAAGGCTACAAGA
AAGAACCTGAATCAAGGACAAGTGCAGGAAGACCTGATCAAAGCATGTCA
TTGAAGTTCTCTGGACCAGagGCAGGATACATTTTCACTTCAACGTGCGT
CGTCGCAGCTGCTGCTACCATTTTAGATGACAACCTCATCAACAAGGGTG
GTGTTTTGACTCCTGCTTCAGCTTTCCGAAAGACCAAATTTGTTGAACGA
TTGGAAAAACGAAACGTCAAAATTGAAGTGATGAATTAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_001079	XLOC_001079	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00002049-protein	TCONS_00002049-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000018	supercontig	sc0000018:576599..590893 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
27.2418	26.0767	50.0591	50.7523	11.9117	10.1129	18.2699	18.5099	40.0895	40.9238	93.916	33.078	33.9107	32.9243	35.0964	59.956	25.9332	25.7959	21.9069	28.9717	30.3932	28.5903	41.2619	39.348	47.9208	71.1614	34.6099	31.9783	155.704	127.091

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR005097	Sacchrp_dh_NADP
IPR016040	NAD(P)-bd_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0016491	oxidoreductase activity

Blast

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BLAST of TCONS_00002049 vs. Swiss-Prot (Human)
Match: SCPDL (Saccharopine dehydrogenase-like oxidoreductase OS=Homo sapiens GN=SCCPDH PE=1 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 8.223e-97
Identity = 164/424 (38.68%), Postives = 255/424 (60.14%), Query Frame = 2

Query: 1127 EHRPYDIIVYGASGFTGQFAAVEAVRTC----KGKKI--GLAGRTKAKLQEVVKRIEKELGSDCDPTDIGIVVADNKNEESIREMCRQTKVVVNCVGPFRWYGELVVASCVEMGTNYVDITGEPEFMQTCQIKYHKAAEEKGVHIVSACGFDSIPADMGLEILRERFPGVLTAAESYIHIRSKRANY----GTYLTIIHSVQNRNSVKDQHKTIFRQKIPYTGPRLRLRNG-GFSNSENRWFIPFLGADPSVVKRTQYHESMVHDRMPVQYFAYFTVPSIFYMICFAIFGVVLFVLTKFSFGIKLLENHPKFFTFGTFCKEGPTRKEIDAGSFKIVFHGKGYKKEPESRTSAGRPDQSMSLKFSGPEAGYIFTSTCVVAAAATILDD--NLINKGGVLTPASAFRKTKFVERLEKRNVKIEVMN 2359
            E RP+ ++V+GASGFTGQF   E  R      +  ++   +AGR++ KLQ V+++   +LG     +++GI++ D  N  S+ EM +Q  VV+NCVGP+R+YGE V+ +C+E G + +DI+GEP+F++  Q+KYH+ A +KGV+I+ + GFDSIPAD+G+   R +  G LTA ES++ I S         GT+ + I+   ++++++        + +P  GP+L+ R    +      + IPF+G+D SVV+RTQ +     +  PVQY AY TV  I  +I     G+      +F  G +LL   P FF+FG F K+GPT+K+IDA SF + F G+GY +   + T   +P+  +  +  GPEAGY+ T   +V AA T+L D  +L   GGV TP +AF KTK ++RL K  ++  V++
Sbjct:    4 EQRPFHLVVFGASGFTGQFVTEEVAREQVDPERSSRLPWAVAGRSREKLQRVLEKAALKLGRPTLSSEVGIIICDIANPASLDEMAKQATVVLNCVGPYRFYGEPVIKACIENGASCIDISGEPQFLELMQLKYHEKAADKGVYIIGSSGFDSIPADLGVIYTRNKMNGTLTAVESFLTIHSGPEGLSIHDGTWKSAIYGFGDQSNLRKLRNVSNLKPVPLIGPKLKRRWPISYCRELKGYSIPFMGSDVSVVRRTQRYLYENLEESPVQYAAYVTVGGITSVIKLMFAGLFFLFFVRFGIGRQLLIKFPWFFSFGYFSKQGPTQKQIDAASFTLTFFGQGYSQ--GTGTDKNKPNIKICTQVKGPEAGYVATPIAMVQAAMTLLSDASHLPKAGGVFTPGAAFSKTKLIDRLNKHGIEFSVIS 425

The following BLAST results are available for this feature:

BLAST of TCONS_00002049 vs. Swiss-Prot (Human)

BLAST of TCONS_00002049 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SCPDL	8.223e-97	38.68	Saccharopine dehydrogenase-like oxidoreductase OS=...	[more]

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TCONS_00002049 (transcript) - C. hemisphaerica