TCONS_00002142 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00002142
Unique Name	TCONS_00002142
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3883

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000018:547174..555422-
coding sequence from alignment at sc0000018:547174..555422-

transcript sequence

>TCONS_00002142 ID=TCONS_00002142|Name=TCONS_00002142|organism=Clytia hemisphaerica|type=transcript|length=3883bp
CAAGTCttctttcaaatttgaaatctaATTTTTGTTGTTGGCCAACCTTA
AACACTTGAGGATGGGGATTTTGGACTAGAAGATTCTAATTCATTATGCA
TCAATTGCCacaaaaattgatatgaaaacGAAGAGTCCGCCAAATCTAAG
TTCACCGGCCACCACACTGGATGATCTACCAATACGCATCTTTGTACATT
GCCCAAACGAAAACATAATCACATTCAATCAAATAAAACAGCACTCAACT
ATTAATGAGATCAAATCACAACTCGAATTACGGACAGGGATCCTAGCAGA
ATTACAATCGCTATATTTCAGTAATGTGAAACTAGAAGATGGGCGTACGC
TACGCGAGAAACACATCAAAAATGGATCTGTGCTCAGGATCAAGGTTAAA
GAACGAAGCTTACAACAGATCTATACAACATCATGTCAAGGGAATATATC
TGAAGTATTTCAACTCGGAGTTGAGTATATAGATGATGATTCATTGTCTG
ATGATGTTGATCCAGAAGATGAAAACAGTATCCCGAACCATGTCAAAGCT
TGGAATTCATTTGTCCCGTTACGTGCTTTCCAAGCTCTTTTTGCAGCTTG
TTACTCTGGTCATTTAGATCTATTGACCAAGCTTGTTGATCACGCTGCAG
CAAATATAGGGATGTTAACAAAGAACCGACACTCTCTGCTTCACGTTGCA
GCTTTCAATGGTCATTTACCGTGTGTTAGTTTTCTGTTGAGTAAAGGAGC
TGATCCAAAGTTAGTGGATTTAGATGGGATGTCAGCATTATCCTTGGCAG
CAATGAATGGTCATCTAAAAGTCGAGAAACATTTGTGGTTGTTTAATTGG
AACATGGAAATCATGACAGGTTACCAAGAGCACCAACAGAACATGATGAG
GTTAGAAAAACGAGAATtatctgaagaagaaaaagatttattggaaatga
aagaaactgCAAAGAAATACAAAAACCAATACAACAGGGTGAAGAGAGAG
AAGAATGAGGGCTTAACATTACCAAGTATCTTGACTGACCAaatgaaaaa
tatgaagatTGACTTCAACAACATGAACAAAAGTGATAATTCGgTAAAAC
TACCGGATATTCAAAACCAAAAGAAATCAAACGAAAAGCGAAAAACAAAG
AACAAGCAGAAAAATGAGGATCTTCCAGCAACTGGCCATGAATCACAAAC
AGTGACACCATTGAACATCAATCCTCAACAACCAAGACATACCTTACCAG
TTCACCATGCAAACCACTCAAGAACAATCTCGGCCCCAGCTCCCATAATA
GCCAATGGTATGCCACAGTTGACAAAATACAGTCGATCAAGCGCCAAATC
TTTGATTAATATAAACAGTAGTAGTCAAACACTGAATACTAAAAATGCAC
CCACAGTTGTTCTAAAATCGACTAAAAAACAACCTCTCAATATGCAGTTC
AAGGCGAATTCGAATCATTTAGCTGCTCATCAAAATCTCCAGAATCGCTT
TGGGAACTCGATGACAAATCTGTCCGTAAATGGTGAAAATGGATTTCACA
GACCCGGTTctaacattcaccagaatcgaATTTTGATCAAACAAAGTCAA
CAGCGTGAATGTTCACCAAATTTTGTGTCTACAGATAGCCGATCGTACGC
GACAGCGAGATTCACAAGAGGGAGAACAGATTATACTCCGAGTGCCGATA
GACCTCCAAAACAGGATACACCTTCGAATccacaaataaaaaaagttatt
gtgAAGACTAACAGCGATAAACTAAATAATGAATATTCTGTCAGCTCGCA
TTCAGAAAAAGACCAAAATGACGGTTATAAAATTCCATCCACAAAATATG
TTGCCCATGATATGAAAACAAGTCATTCAAGGAAACAAACTGCTCAGGCT
ACAAAGACAAAAGAAGGGTCTGGAAAACCTTTTGGCGACCCAGAAAGAAA
AGAGAGTACGGAAGTGATTGACGCTTTCTTAGATGCTGTCATTAATAAAT
CGAAGAAAGATTTGGTCAAGCCCAGTACTGCAGAGCTACACACTTCAAAG
GACACATCAGACCAGCCTAATAATGTCACAAATAAGTCATTAGTAAAGGA
CTCAACTAAAGATTTGAAAGATAAGAGAAATTTGAAAGTGAGGTTCGCTG
AGACTgagcaaaatgaaaatgaaaagagaaACGAGATCAATACTGATGAA
CCAATCAATGAGCTTATAGCTAGGTATCCTGAGCTCATGGATACTAATGG
CAAAGAAGAAATGAGTAAGGTACCCAAACTAGCAACTGTGATGGTTGATA
GCATAGATTTGAAAAAAGGATCGAAAACAAGAGAAATCATTACAACAGAA
ACAGATGGAGTGAGGTTCATAGATGTCCCAAGTAAAAGCTCCCAGAACGA
CGGTAGCCGACGAGGAGAAAAGTCAAATGATAAACAAGGAGTGCAAATTC
CTTCACAGGGTGAGAATGAAACACCATTACAAATCTCTGCCTTATCTGTC
AAAGATAACGATGGTGAAGAAGCCATCTTTGAATCACTATGGCAACCTAT
TAATTCACAAAACACATCAGAAGTTAAAATCAATGGTCGATTTGTTAAGA
CTTTTGATGAGTGGCTGGATGAGAAGAATCAGCAACGAAAACAGATTGAG
AAGAGTTCACCTGATGTGAAGAAGGAGGTAATGAATAACGAAGAGGAGCA
AAATGGATACACGAATGAACGAATGAAAGCTTTTAAAGAATGGTACGCTG
CTAAAGAGAAGGAAATCAAAAGACAAAAACGATTAGAGAAGCTTTCACCA
GAACCTCTCAGACGCATGCGTACTTTTTCATCTCACGCTGTTACATTCGA
GAAATGGCTTGAGAGGAAACGCCAGTTACCGCCCCGATCTTTGACACCAA
CGCAACAAGAAGGAAAAGGTGTGGATGGGCGCCCACCCGTAAGGCGTGAA
CGAATACGCCATGGGATGACTTTTGAGGAATGGAAGAAATGGAAAGAggg
tgaaagaaaacaaaaactgaaagaaattgcacaaaattaCGAGGATTCTT
TTAAAGAGCTTGAAAAAGAAAGATGCAAAGAGTTAAATATGCGTAACTAC
GAATTATGGTTAGAGCGTAAAAATGAGGAGAAAAAGATCAACATGGCGCT
TGAAAAAACAATACGTGAACAGAAAGAAGAATCCTTGAGGCGCCGTAAGC
TACAAAAATATTACGATCCACACATGAAGACTTTCGAGGAATGGCTTTTA
GAGAAAAAGTATGATGAAAAATTCGTAAATGAGCAACGTAAAATGTTACG
AGACCGAGATGAAGATGAGAATTTTGGAGATGCTGACTCAGCATCGAATG
CGATTTTCGAGATATGGTTGACCAATAAATTTGCACAAGAGATGCAAAGG
GAAAAAGGGAAATTGAACCATATGAAATATGGTATGAATTTTGATCATAA
GGACAATGAGAGTGATGGAAGTGAATCAGAGACAAGTGATTACGAAGATG
ACTTTGAAAGTGACTCTGCCTGATGATGGGTACTGAACATATGCAAGTGG
CGAAATGACGGGAATGCCGCCCGATCTTTGAAAATCGGAAATTTTAGGGT
CTAAAatcgagaaagaaaattgaaattttgtaaattgtgggacccttacc
gggactttTTTCCTGAAATTAGATATTGTGATTATTACGAACCTTATTAA
GAGGGACttttgaagtttcaaataaaGGTCTCCTAAAGAGAGGCACATAC
CCGTaacctccatttgcctaagtaccctctGACAttttctaattcgatct
tcattccaaaaatttttcttcgagttagagaaagattcgaattacagaga
gtatttaAATCACTTTCCAATTGAGGGGGTCAA

Run BLAST on NCBI

protein sequence of TCONS_00002142-protein

>TCONS_00002142-protein ID=TCONS_00002142-protein|Name=TCONS_00002142-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1133bp
MKTKSPPNLSSPATTLDDLPIRIFVHCPNENIITFNQIKQHSTINEIKSQ
LELRTGILAELQSLYFSNVKLEDGRTLREKHIKNGSVLRIKVKERSLQQI
YTTSCQGNISEVFQLGVEYIDDDSLSDDVDPEDENSIPNHVKAWNSFVPL
RAFQALFAACYSGHLDLLTKLVDHAAANIGMLTKNRHSLLHVAAFNGHLP
CVSFLLSKGADPKLVDLDGMSALSLAAMNGHLKVEKHLWLFNWNMEIMTG
YQEHQQNMMRLEKRELSEEEKDLLEMKETAKKYKNQYNRVKREKNEGLTL
PSILTDQMKNMKIDFNNMNKSDNSVKLPDIQNQKKSNEKRKTKNKQKNED
LPATGHESQTVTPLNINPQQPRHTLPVHHANHSRTISAPAPIIANGMPQL
TKYSRSSAKSLININSSSQTLNTKNAPTVVLKSTKKQPLNMQFKANSNHL
AAHQNLQNRFGNSMTNLSVNGENGFHRPGSNIHQNRILIKQSQQRECSPN
FVSTDSRSYATARFTRGRTDYTPSADRPPKQDTPSNPQIKKVIVKTNSDK
LNNEYSVSSHSEKDQNDGYKIPSTKYVAHDMKTSHSRKQTAQATKTKEGS
GKPFGDPERKESTEVIDAFLDAVINKSKKDLVKPSTAELHTSKDTSDQPN
NVTNKSLVKDSTKDLKDKRNLKVRFAETEQNENEKRNEINTDEPINELIA
RYPELMDTNGKEEMSKVPKLATVMVDSIDLKKGSKTREIITTETDGVRFI
DVPSKSSQNDGSRRGEKSNDKQGVQIPSQGENETPLQISALSVKDNDGEE
AIFESLWQPINSQNTSEVKINGRFVKTFDEWLDEKNQQRKQIEKSSPDVK
KEVMNNEEEQNGYTNERMKAFKEWYAAKEKEIKRQKRLEKLSPEPLRRMR
TFSSHAVTFEKWLERKRQLPPRSLTPTQQEGKGVDGRPPVRRERIRHGMT
FEEWKKWKEGERKQKLKEIAQNYEDSFKELEKERCKELNMRNYELWLERK
NEEKKINMALEKTIREQKEESLRRRKLQKYYDPHMKTFEEWLLEKKYDEK
FVNEQRKMLRDRDEDENFGDADSASNAIFEIWLTNKFAQEMQREKGKLNH
MKYGMNFDHKDNESDGSESETSDYEDDFESDSA

Run BLAST on NCBI

transcript from alignment at sc0000018:547174..555422-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00002142 ID=TCONS_00002142|Name=TCONS_00002142|organism=Clytia hemisphaerica|type=transcript|length=8249bp|location=Sequence derived from alignment at sc0000018:547174..555422- (Clytia hemisphaerica)
CAAGTCTTCTTTCAAATTTGAAATCTAATTTTTGTTGTTGGCCAACCTTA
AACACTTGAGGATGGGGATTTTGGACTAGAAGGTAAGAGTTTTTGAAAAG
ATCAAAAATTTTGAAAGATCAAAGGATTCAAAGTTTAATGGTCAAACTTT
TTAAGGGCAGCTCTTGTTAAACTTACTTACCTTACTACCAAGCCTGAACT
AAAGTTTCCCATGATAAAATCTAAAGGGATTTAGAAGAGCTAGTTAGCTA
TCAAATAATTAGTTTTTTGCTCCCTTCTCGAGAAAAGGATGATATAAAAT
TTGGCATGTTAGGGAAGATTTGCATTTATTGATTCTAATTTAATTTCTTG
TCAGACTCCATCAATTGCCAAATAAAATTGTTATGATATGGTTTTGCAGA
GCTAGATAACTATTGAGAAAATCCTTAGCTCTTGGAAGCTTCTCGAAAAA
AGGGATGAAAGCAAGGCGCTACCAGATTATTTTCGAGATGCATTAAGTAA
AAGGATTTACTTGTATTAATTCACATTTAATTTTTTACCAGATTCTAATT
CATTATGCATCAATTGCCACAAAAATTGATATGAAAACGAAGAGTCCGCC
AAATCTAAGTTCACCGGCCACCACACTGGATGATCTACCAATACGCATCT
TTGTACATTGCCCAAACGAAAACATAATCACATTCAATCAAATAAAACAG
CACTCAACTATTAATGAGATCAAATCACAACTCGAATTACGGACAGGGAT
CCTAGCAGAATTACAATCGCTATATTTCAGTAATGTGAAACTAGAAGATG
GGCGTACGCTACGCGAGAAACACATCAAAAATGGATCTGTGCTCAGGATC
AAGGTTAAAGAACGAAGCTTACAACAGATCTATACAACATCATGTCAAGG
GAATATATCTGAAGTATTTCAACTCGGAGTTGAGTATATAGATGATGATT
CATTGTCTGATGATGTTGATCCAGAAGATGAAAACAGTATCCCGAACCAT
GTCAAAGCTTGGAATTCATTTGTCCCGTTACGTGCTTTCCAAGCTCTTTT
TGCAGCTTGTTACTCTGGTCATTTAGATCTATTGACCAAGCTTGTTGATC
ACGCTGCAGCAAATATAGGGATGTTAACAAAGAACCGACACTCTCTGCTT
CACGTTGCAGCTTTCAATGGTCATTTACCGTGTGTTAGTTTTCTGTTGAG
TAAAGGAGCTGATCCAAAGTTAGTGGATTTAGATGGTAAGGTGGTTTCGT
TCTTTTTCAAGCTATCAGAAATTAGATTATTTTAATGAAGTTAAGTCACA
GGTCCGGCGGAGGCGGGGAGACTGGAGAGACTTCAGCCTCCCCACTTTGA
GTAAAATCAGATTCTTATCTCAAATTCCTAGCGAATTTTATCTCATTTTG
AGCCTTCAGCCTCCCCACTTTTACGGTTATTCCGCTAGTTCTGAGTCATA
TGTTTTTATGGGGACATTTGGAATTTTTTTCTTAAAATTCTAAGAAATGG
CAGCTTCCATGTTTTTTTTTTATATTTATACACCCCTGGCTCGATGACCC
GGTCAGAGCTTATAAACTCTGGATGGATGTTGTCTGAAAGTTTTTTCTAG
CGTTTCATGATATGCATGGGTACTGTTAAACGCTCTGAAATATCAAAATT
AAAGTCGAAGAGGAAGGTTTCACATTAAATTGCCCTTTGATAAAGCTGAG
GGTCTGATATTTAACGAAGGAATGATTTAGTCAATCAATTATTAGTGAGC
CAGGATCTAGAATAATTCTAGACGATCCTATCGTCTACACAAGATCACTA
AAAAAGGGAATAGTTTAGGAGAGGTGTGATAAATTCGGGTGGAGTAAGCA
GTGGCAGAGATGTTTACAGTGTTCCAAAGCTCTACCGCCACTTTTTTCCC
GTAAACCGCCCTGACGCCCTAACTCTTTCCCGCGTTTACTCGAAACGGAC
GATAACATCGTCAAGGATAATTCTAAATCATCCTTATTCTAAAATCATCA
GATGTTGTAGAATTTTCCTTATTGACTTTTTAGGGATGTCAGCATTATCC
TTGGCAGCAATGAATGGTCATCTAAAAGTCGAGAAACATTTGTGGTTGTT
TAATTGGAACATGGAAATCATGACAGGTTTGTTGACAATGGGGGTCGTCA
TTTGCTTTACGAGATGACGGGTGTGTCCGAGCCAAAGCTCGAAAACCGAC
CCTAATAGAGACTGGATTTTGAAAGTTTTGTCCATTATTTTGACGTTTAA
GCCGAAATTTTAAAAATTTATGACCCTTAGAGGGACTTTCGAGGGTGTGA
AAAAAGGACCCTTATGGCTCACACATATCCGGCACCCATTTTGCCTAAGT
TTCACCAGTCTCGGCTGATAGGAGTTCGAATGCATTAGTTAATGATGGCA
AACTAGAAACAGTGGGTATTTCAACAATGAATCTTTCGTTTGAGACGGTT
TGAGGCGCTGAAGCCTTAATCAATCTGCCATTTGTTCCGGTCATAGTTAT
TCGCTGTGAATATTTGATTTTTTTGCCAGCTGAAACACGCAAACATAATA
TATTTTGAGAAAAGATCTTGAGCTTTCAACCAAGACTTTCTTTTTTCTTT
CCACAGGTTACCAAGAGCACCAACAGAACATGATGAGGTTAGAAAAACGA
GAATTATCTGAAGAAGAAAAAGATTTATTGGAAATGAAAGAAACTGCAAA
GAAATACAAAAACCAATACAACAGGTACATGTCCATTTTACATCAACAAA
TCTTCTGAGATTTACATCCGGGGGTAGTGGGTTTGCCGACTGACGGTATG
TACGGCGAATTGAATAGCGAGTACCTCACTAAAAACCGGAATACTTCATT
CCGTTTCTTAGTGAGTTTTTGGAAAGCCTTTCAAGTGTTTTAACGCAAAT
TCTATATTTTCGCTATTGCAGTTGCAAAAGCTTAAAGTGACGTAAAAAAG
TCGAATGTTTAGAGCCCGAAAAAATGGGCTCAAAACATTCGAAAAAGTCG
CAAAGTGGAATAGATGTTAATTGCATAGAAAAAACGCGGATGGCGTCTAG
TATAGGCTAAGAAGTAAAGGGTTTTTAGAATCGCAGCCTCACAGTGCAAC
AAAAAATTGGTGAAATTCGAATCCTAACAGTGCATTTTCTCAAATTTTCA
ACTCTTTTGAGCAAAAAAAATCAGAATTTCAGGGCAAAAATTAGCAATTT
TTCCTGGATTTGTTGCAATTTCCACCCTTTCAGTGGATTTCTGATATCTT
GAAAACGTACTGCACATACCCAAAGGTCAATTTGCCTTACTCCTCCCCCG
GATTCACATTCAGATTATTTGTAAATTTTCTGGAACCACTCGAACGGGGG
ACTCGAGATAAGCAAACTTACTGTTCTTGGCAAAACTTTGGAGAATCTGA
CCATTTTTTGACTTATGGACAAAATAATTTTCAAGAAAAGACATCTTAAG
GGTTGCTGTTCACTTATTCGAAAGATTCTGCAGTAAATCCGTTCCTCAAG
CCTCTATAACTCGAAAGTTTTCCCCTTGTCGTTCGAGTTATCCAAAATAT
ACTTCATATATTATTTCCAGGGTGAAGAGAGAGAAGAATGAGGGCTTAAC
ATTACCAAGTATCTTGACTGACCAAATGAAAAATATGAAGATTGACTTCA
ACAACATGAACAAAAGTGATAATTCGGTGAGCAAATCTTGTATTCGTTTA
ACTCCTTGACATTCCACAAGCGAAATTTTGTTCTCTTAGGAACGATATTT
TTGGCTGCTGGTAGCTTTAATTGAGGACCCAATTCAAAAATTTTGCAAGA
TCTAAAAAGATAGAGCTTTGAAAGAGCTTTCCAACGGTAACAAACATTAA
GGGTTTAGCTATCACCAAACCGAGATAATTCGATTCAAAGTTTAAGCATT
GAAAAGTCTTAAAAATGCAATTTTAAAGTTTTTTTAGAAAGTCAAGGAGT
TAAACATTAGGAAAGAAAACTATATACTCTAACCGCCTTAACCGCCACCA
GAAATTTTTTAACCTGATAGCGTGAGCCATGACACTGCTTGGGGGCTTCT
TTACAAACCCGGCGGAATCACCGTAAAAGTGGGAAGACTAAAGGATCAAA
ATGAGATAAAACTCGCTAAGAGTTTATGAGAAAAATCTCATTTGCTCAAA
GTTGGGAAGGTCAAGTCTCCCCTCTTCTAGCGGGCCTGCTTTAGACTGTG
ATTTACTTCATTAGGAGTTAAGATCTTCCATATTGAGAAGTTTGGATGTT
AGCCTAAGATATAGAGTTTCTCTTTTGATCGACCAAGCAGTATTTCCTGG
AATCATCTCTTGAAAGCTTGAAAGTACTTATAAAGTGAGGAGATTTTTGA
CGGATTAAATCTAGAGCTCCCTTAGTTTTCCCGTGGCATATTTTTCGAAA
TCTGATTATAGATTTTACTTCTAACACAGTGGTACCCAGCTGGCACACGT
TTTTTTCAACGTTTATCTAATGTTCACAACGTCCAAATAACGTTCGATTA
ACGTTAAATCAACGTTGTGTGCCAAGTGGGTAAAAACCAAGTGGGTCAAG
AAAAAAGGGGCTTTATTCCTCATCCAATAGTTTTATCTTCAACTCGGCTT
CCATTGATATTGTTGCTATGCATTGTCGAACTTCTTCAATTTTTATTTCA
GGTAAAACTACCGGATATTCAAAACCAAAAGAAATCAAACGAAAAGCGAA
AAACAAAGAACAAGCAGAAAAATGAGGATCTTCCAGCAACTGGCCATGAA
TCACAAACAGTGACACCATTGAACATCAATCCTCAACAACCAAGACATAC
CTTACCAGTTCACCATGCAAACCACTCAAGAACAATCTCGGCCCCAGCTC
CCATAATAGCCAATGGTATGCCACAGTTGACAAAATACAGTCGATCAAGC
GCCAAATCTTTGATTAATATAAACAGTAGTAGTCAAACACTGAATACTAA
AAATGCACCCACAGTTGTTCTAAAATCGACTAAAAAACAACCTCTCAATA
TGCAGTTCAAGGCGAATTCGAATCATTTAGCTGCTCATCAAAATCTCCAG
AATCGCTTTGGGAACTCGATGACAAATCTGTCCGTAAATGGTGAAAATGG
ATTTCACAGACCCGGTTCTAACATTCACCAGAATCGAATTTTGATCAAAC
AAAGTCAACAGCGTGAATGTTCACCAAATTTTGTGTCTACAGATAGCCGA
TCGTACGCGACAGCGAGATTCACAAGAGGGAGAACAGATTATACTCCGAG
TGCCGATAGACCTCCAAAACAGGATACACCTTCGAATCCACAAATAAAAA
AAGTTATTGTGAAGACTAACAGCGATAAACTAAATAATGAATATTCTGTC
AGCTCGCATTCAGAAAAAGACCAAAATGACGGTTATAAAATTCCATCCAC
AAAATATGTTGCCCATGATATGAAAACAAGTCATTCAAGGAAACAAACTG
CTCAGGCTACAAAGACAAAAGAAGGGTCTGGAAAACCTTTTGGCGACCCA
GAAAGAAAAGAGAGTACGGAAGTGATTGACGCTTTCTTAGATGCTGTCAT
TAATAAATCGAAGAAAGATTTGGTCAAGCCCAGTACTGCAGAGCTACACA
CTTCAAAGGACACATCAGACCAGCCTAATAATGTCACAAATAAGTCATTA
GTAAAGGACTCAACTAAAGATTTGAAAGATAAGAGAAATTTGAAAGTGAG
GTTCGCTGAGACTGAGCAAAATGAAAATGAAAAGAGAAACGAGATCAATA
CTGATGAACCAATCAATGAGCTTATAGCTAGGTATCCTGAGCTCATGGAT
ACTAATGGCAAAGAAGAAATGAGTAAGGTACCCAAACTAGCAACTGTGAT
GGTTGATAGCATAGATTTGAAAAAAGGATCGAAAACAAGAGAAATCATTA
CAACAGAAACAGATGGAGTGAGGTTCATAGATGTCCCAAGTAAAAGGTAG
GAGATTATTGATCATAATTTGGTATAATTCCCAAAGAAATAGTGTATTTT
GGAGTCTCTAAAACCTTTTGAATGTTCTTGAGATAATGTTCTAATAATTC
TGGCCTTCAAGCTTTATGTTCTTATACAGTATATACCTCAAGGGAAGAAA
TTTTGGTGGAAAGAAATTTTGGCGAATTGCCTAAAAATTCGCCAAATTCA
CCAAAATTTCTTTCCGCCAAATCTAAATTTATAGGTCATTCGCCCGGGGG
GGGCACTCGATCTGAAATCGACCATACGTTCGGCCCAAAATTTGGCTTCT
AAAATCGGACCCTTACAGTGCAGTTCAGTGCAGTCTTGTAATTTCCTACC
CTTACAGTGCACTAGCTGAACTTTGAAAAACCTACCCTTAAGGGCCGAAC
GTCTGGTAGGTCATTTACCTTGAGTGCCCCCCCGGGGTCATTCGCCACAA
TAAATTCTCGCCAAATTTAATTTTCTTTCAATTTAGTCTCTATTTCTCCT
AAAAAACCCTTTTTTCCCCTTTTTTAGCTAAAATATTGAACAAAAATGGG
TCGTTCGCCAAAATTAATTCTTGCCAAATTTAGAAATTTTATTAAATCGC
CAAAATAAATTCCAAAAATTGGCGAATGGGCTCATTCACCAAAAATTCTT
CTCGCCAAAATTTCNTTTATTAAATCGCCAAAATAAATTCCAAAAATTGG
CGAATGGGCTCATTCACCAAAGTTTCTTCTCGCCAAATTTATTCTCTTAA
AGGTACTTTGTTCTTTCATATTTCATGAAATTTCTTACTTTTTCTCTTCT
TCAGCTCCCAGAACGACGGTAGCCGACGAGGAGAAAAGTCAAATGATAAA
CAAGGAGTGCAAATTCCTTCACAGGGTGAGAATGAAACACCATTACAAAT
CTCTGCCTTATCTGTCAAAGATAACGATGGTGAAGAAGCCATCTTTGAAT
CACTATGGCAACCTATTAATTCACAAAACACATCAGAAGTTAAAATCAAT
GGTCGATTTGTTAAGACTTTTGATGAGTGGCTGGATGAGAAGAATCAGCA
ACGAAAACAGATTGAGAAGAGTTCACCTGATGTGAAGAAGGAGGTAATGA
ATAACGAAGAGGAGCAAAATGGATACACGAATGAACGAATGAAAGCTTTT
AAAGAATGGTACGCTGCTAAAGAGAAGGAAATCAAAAGACAAAAACGATT
AGAGAAGCTTTCACCAGAACCTCTCAGACGCATGCGTACTTTTTCATCTC
ACGCTGTTACATTCGAGAAATGGCTTGAGAGGAAACGCCAGTTACCGCCC
CGATCTTTGACACCAACGCAACAAGAAGGAAAAGGTGTGGATGGGCGCCC
ACCCGTAAGGCGTGAACGAATACGCCATGGGATGACTTTTGAGGAATGGA
AGAAATGGAAAGAGGGTGAAAGAAAACAAAAACTGAAAGAAATTGCACAA
AATTACGAGGATTCTTTTAAAGAGCTTGAAAAAGAAAGATGCAAAGAGTT
AAATATGCGTAACTACGAATTATGGTTAGAGCGTAAAAATGAGGAGAAAA
AGATCAACATGGCGCTTGAAAAAACAATACGTGAACAGAAAGAAGAATCC
TTGAGGCGCCGTAAGCTACAAAAATATTACGATCCACACATGAAGACTTT
CGAGGAATGGCTTTTAGAGAAAAAGTATGATGAAAAATTCGTAAATGAGC
AACGTAAAATGTTACGAGACCGAGATGAAGATGAGAATTTTGGAGATGCT
GACTCAGCATCGAATGCGATTTTCGAGATATGGTTGACCAATAAATTTGC
ACAAGAGATGCAAAGGGAAAAAGGGAAATTGAACCATATGAAATATGGTA
TGAATTTTGATCATAAGGACAATGAGAGTGATGGAAGTGAATCAGAGACA
AGTGATTACGAAGATGACTTTGAAAGTGACTCTGCCTGATGATGGGTACT
GAACATATGCAAGTGGCGAAATGACGGGAATGCCGCCCGATCTTTGAAAA
TCGGAAATTTTAGGGTCTAAAATCGAGAAAGAAAATTGAAATTTTGTAAA
TTGTGGGACCCTTACCGGGACTTTTTTCCTGAAATTAGATATTGTGATTA
TTACGAACCTTATTAAGAGGGACTTTTGAAGTTTCAAATAAAGGTCTCCT
AAAGAGAGGCACATACCCGTAACCTCCATTTGCCTAAGTACCCTCTGACA
TTTTCTAATTCGATCTTCATTCCAAAAATTTTTCTTCGAGTTAGAGAAAG
ATTCGAATTACAGAGAGTATTTAAATCACTTTCCAATTGAGGGGGTCAA

Coding sequence (CDS) from alignment at sc0000018:547174..555422-

>TCONS_00002142 ID=TCONS_00002142|Name=TCONS_00002142|organism=Clytia hemisphaerica|type=CDS|length=3402bp|location=Sequence derived from alignment at sc0000018:547174..555422- (Clytia hemisphaerica)
ATGAAAACGAAGAGTCCGCCAAATCTAAGTTCACCGGCCACCACACTGGA
TGATCTACCAATACGCATCTTTGTACATTGCCCAAACGAAAACATAATCA
CATTCAATCAAATAAAACAGCACTCAACTATTAATGAGATCAAATCACAA
CTCGAATTACGGACAGGGATCCTAGCAGAATTACAATCGCTATATTTCAG
TAATGTGAAACTAGAAGATGGGCGTACGCTACGCGAGAAACACATCAAAA
ATGGATCTGTGCTCAGGATCAAGGTTAAAGAACGAAGCTTACAACAGATC
TATACAACATCATGTCAAGGGAATATATCTGAAGTATTTCAACTCGGAGT
TGAGTATATAGATGATGATTCATTGTCTGATGATGTTGATCCAGAAGATG
AAAACAGTATCCCGAACCATGTCAAAGCTTGGAATTCATTTGTCCCGTTA
CGTGCTTTCCAAGCTCTTTTTGCAGCTTGTTACTCTGGTCATTTAGATCT
ATTGACCAAGCTTGTTGATCACGCTGCAGCAAATATAGGGATGTTAACAA
AGAACCGACACTCTCTGCTTCACGTTGCAGCTTTCAATGGTCATTTACCG
TGTGTTAGTTTTCTGTTGAGTAAAGGAGCTGATCCAAAGTTAGTGGATTT
AGATGGGATGTCAGCATTATCCTTGGCAGCAATGAATGGTCATCTAAAAG
TCGAGAAACATTTGTGGTTGTTTAATTGGAACATGGAAATCATGACAGGT
TACCAAGAGCACCAACAGAACATGATGAGGTTAGAAAAACGAGAATTATC
TGAAGAAGAAAAAGATTTATTGGAAATGAAAGAAACTGCAAAGAAATACA
AAAACCAATACAACAGGGTGAAGAGAGAGAAGAATGAGGGCTTAACATTA
CCAAGTATCTTGACTGACCAAATGAAAAATATGAAGATTGACTTCAACAA
CATGAACAAAAGTGATAATTCGGTAAAACTACCGGATATTCAAAACCAAA
AGAAATCAAACGAAAAGCGAAAAACAAAGAACAAGCAGAAAAATGAGGAT
CTTCCAGCAACTGGCCATGAATCACAAACAGTGACACCATTGAACATCAA
TCCTCAACAACCAAGACATACCTTACCAGTTCACCATGCAAACCACTCAA
GAACAATCTCGGCCCCAGCTCCCATAATAGCCAATGGTATGCCACAGTTG
ACAAAATACAGTCGATCAAGCGCCAAATCTTTGATTAATATAAACAGTAG
TAGTCAAACACTGAATACTAAAAATGCACCCACAGTTGTTCTAAAATCGA
CTAAAAAACAACCTCTCAATATGCAGTTCAAGGCGAATTCGAATCATTTA
GCTGCTCATCAAAATCTCCAGAATCGCTTTGGGAACTCGATGACAAATCT
GTCCGTAAATGGTGAAAATGGATTTCACAGACCCGGTTCTAACATTCACC
AGAATCGAATTTTGATCAAACAAAGTCAACAGCGTGAATGTTCACCAAAT
TTTGTGTCTACAGATAGCCGATCGTACGCGACAGCGAGATTCACAAGAGG
GAGAACAGATTATACTCCGAGTGCCGATAGACCTCCAAAACAGGATACAC
CTTCGAATCCACAAATAAAAAAAGTTATTGTGAAGACTAACAGCGATAAA
CTAAATAATGAATATTCTGTCAGCTCGCATTCAGAAAAAGACCAAAATGA
CGGTTATAAAATTCCATCCACAAAATATGTTGCCCATGATATGAAAACAA
GTCATTCAAGGAAACAAACTGCTCAGGCTACAAAGACAAAAGAAGGGTCT
GGAAAACCTTTTGGCGACCCAGAAAGAAAAGAGAGTACGGAAGTGATTGA
CGCTTTCTTAGATGCTGTCATTAATAAATCGAAGAAAGATTTGGTCAAGC
CCAGTACTGCAGAGCTACACACTTCAAAGGACACATCAGACCAGCCTAAT
AATGTCACAAATAAGTCATTAGTAAAGGACTCAACTAAAGATTTGAAAGA
TAAGAGAAATTTGAAAGTGAGGTTCGCTGAGACTGAGCAAAATGAAAATG
AAAAGAGAAACGAGATCAATACTGATGAACCAATCAATGAGCTTATAGCT
AGGTATCCTGAGCTCATGGATACTAATGGCAAAGAAGAAATGAGTAAGGT
ACCCAAACTAGCAACTGTGATGGTTGATAGCATAGATTTGAAAAAAGGAT
CGAAAACAAGAGAAATCATTACAACAGAAACAGATGGAGTGAGGTTCATA
GATGTCCCAAGTAAAAGCTCCCAGAACGACGGTAGCCGACGAGGAGAAAA
GTCAAATGATAAACAAGGAGTGCAAATTCCTTCACAGGGTGAGAATGAAA
CACCATTACAAATCTCTGCCTTATCTGTCAAAGATAACGATGGTGAAGAA
GCCATCTTTGAATCACTATGGCAACCTATTAATTCACAAAACACATCAGA
AGTTAAAATCAATGGTCGATTTGTTAAGACTTTTGATGAGTGGCTGGATG
AGAAGAATCAGCAACGAAAACAGATTGAGAAGAGTTCACCTGATGTGAAG
AAGGAGGTAATGAATAACGAAGAGGAGCAAAATGGATACACGAATGAACG
AATGAAAGCTTTTAAAGAATGGTACGCTGCTAAAGAGAAGGAAATCAAAA
GACAAAAACGATTAGAGAAGCTTTCACCAGAACCTCTCAGACGCATGCGT
ACTTTTTCATCTCACGCTGTTACATTCGAGAAATGGCTTGAGAGGAAACG
CCAGTTACCGCCCCGATCTTTGACACCAACGCAACAAGAAGGAAAAGGTG
TGGATGGGCGCCCACCCGTAAGGCGTGAACGAATACGCCATGGGATGACT
TTTGAGGAATGGAAGAAATGGAAAGAGGGTGAAAGAAAACAAAAACTGAA
AGAAATTGCACAAAATTACGAGGATTCTTTTAAAGAGCTTGAAAAAGAAA
GATGCAAAGAGTTAAATATGCGTAACTACGAATTATGGTTAGAGCGTAAA
AATGAGGAGAAAAAGATCAACATGGCGCTTGAAAAAACAATACGTGAACA
GAAAGAAGAATCCTTGAGGCGCCGTAAGCTACAAAAATATTACGATCCAC
ACATGAAGACTTTCGAGGAATGGCTTTTAGAGAAAAAGTATGATGAAAAA
TTCGTAAATGAGCAACGTAAAATGTTACGAGACCGAGATGAAGATGAGAA
TTTTGGAGATGCTGACTCAGCATCGAATGCGATTTTCGAGATATGGTTGA
CCAATAAATTTGCACAAGAGATGCAAAGGGAAAAAGGGAAATTGAACCAT
ATGAAATATGGTATGAATTTTGATCATAAGGACAATGAGAGTGATGGAAG
TGAATCAGAGACAAGTGATTACGAAGATGACTTTGAAAGTGACTCTGCCT
GA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_001117	XLOC_001117	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00002142-protein	TCONS_00002142-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000018	supercontig	sc0000018:547174..555422 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00965644	0.0188331	0	0.0748771	0.0390667	0.0617421	0.0620744	0.0116227	0.0244119	0.0100793	0.0195665	0.00643113	6.71119	9.52406	0.0109665	0.0470749	1.18884	1.82779	25.4777	26.9292	1.48449	1.88534	0.7086	1.22805	5.01796	3.55312	0.0132409	0.014131	0.0107179	0.0218397

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000626	Ubiquitin_dom
IPR002110	Ankyrin_rpt
IPR020683	Ankyrin_rpt-contain_dom
IPR029071	Ubiquitin-rel_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00002142 vs. Swiss-Prot (Human)

BLAST of TCONS_00002142 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00002142 (transcript) - C. hemisphaerica