TCONS_00002147 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002147
Unique NameTCONS_00002147
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2105

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002147 ID=TCONS_00002147|Name=TCONS_00002147|organism=Clytia hemisphaerica|type=transcript|length=2105bp
TGCTAAGGAATAAGAAGTCAAAAAATGGTGAAGGAAAGCAAGGCAATGGA
CCGAATCATATTGACATCAGTGAAAATCAAATGTTTACAAGCACAATTAG
GATGTGATTGGCAAGGTGAACTATCCTCAGTTGAGaaacacgAGGAGAAA
TGTAAATACAAGTCTATCCAATGTTCGAATAAAGGATGTCGTTCAGAAAT
GATGAGAATGAACTTACTAAAACATTTGAATAATTGTCAATATCAAATTG
TTGCATGTGAATTTTGTGCAACTAAAGTACCACAAATTGATATGGAGGAC
CATCGCATAGACTGTGACTTTTGTCCGAAGAAATGTCCAAATGAAAACTG
CCAAGTCAAAATTAGAAATACAGAGCTTGATGCACATTTGGAGCAAGATT
GCCAATATGAGCCAGTGGAATGCAGATATAGCGCATTTGGTTGTGAAGAT
AAGATAAAACGAATCGATATGAAGCTCCACTTGGATGAATCAGTACACGA
TCACATGTCATTACTTTTCAAGAGTAACCAAGACCTTGAGAAATCTCATC
GAGAAACAAAACAGGAGTTAGATGATGCTCAAcaacgattggtcaaaaca
acAATGGTGTTGAAAGAATTCAATGAAATGTTGAATCAAACACGACGAGA
GCTTGAAGCAACAAAACGTGAATTTGCAGCATTCAGAAAGGAGACATCTG
AGAAAATAGCTGAACAAGATGCACAATTGGAGAAATACAAGAATCAACCA
AGAGCTCCTACACCAACCAGAATTGAGCCTCTGAAATCACCACGTGATAG
TCCAGTCTCCAAGAGCCCAAGGCAAAGTCCAGAACCAGGCACCAATATCC
CAATCGGTCGCAAGTCACCAGAGCCTGTTAAGGAGCGAAGAACACCTTCT
CCAACATCAGATGACAAAAAAGGAGGAATCTTAAAGAAAGCGAAATCAGC
TGACAACTTAACAACAGCTGGACGTAGCAGCTCACCTGTcacattgaaat
tattcttaaaGAAATCTGATTCTCCTATTAACGTTACACGTTCAGATTCG
AACGCGTCTTCTAGTTCCTCGTCATCGGCCGGCTCCACCAACCCGCCGCC
TCCTCAAATCGTTTCCAAGAACCCGCTTTCTCCATTGACTCCTTTGTCAC
CAATGTCACCAACAAAGCGCGTCTCTCCTCCACCACCAGGAGCCAAGGAT
TTACCAGACGAGCCAAGAAGCCCACAAAACGGCGAAACCACGTTACAAAG
AAAACGCCAAGCCGCCATTAAGCCTATTATTACACGCCCATCGACGCCAC
TTCAATCGATAATCGACGCGATGAATAATTCACCCATTAATGATTATCCA
CAACATTTCCACGCCATGATGCAGAATATGGAACCAGATCGATTCTACGT
TGTCAACGGTGATCTTCTCATCAAGGTCAATACGTTCGGATCGTTACGTC
CGTACGCTGTCGTTTACGTGCAACCGTGGGAAGAACGTAGCCGTAAAGTC
TTCCAAGAAATGCGTTTAAACAAACGTACAAAACATCACAGCGAACGTGT
CTGTATTGAAGCTAACTCACAAGTTGGAATTGTCAAACTTCTTGTTAATT
GCACTTTGCAAGACACAATCGTATCCGTTGTTTGTACACAACAAAACACA
GCTTTTCTTCCCTCCTATATCGAAACTATGGGATGGGGCTTCCAAGTACC
TGCTGGATTACACAGAAACGCATTTTTCCATCAAGAAAATATGTTGTTGA
GACTCAGACAACGTATTCCAGATGTTGAGAGAATGGCAGCTGGTATGTAA
ATAAACGAACACTTTTTATAATACGAATTTGGGACAAAGTCTTACAATAT
TGTGACTATGGTATTATTTTTTCTCctatgtattttttttaaagaaaaat
gacatttttttattgcatgatttatattttatttttggatttttattttt
taacaaacaatGTGTAAATACTTTTCTTTCTTACCTTTTTACTAATTGCT
GGCAATAATGatgatttttataaatatgattttgaacCGAAGCAGGGTCT
AAGCTAGCAACAGTGTTCTCAAAATacctactcttgtctcccgaatagac
gtccc
Run BLAST on NCBI

protein sequence of TCONS_00002147-protein

>TCONS_00002147-protein ID=TCONS_00002147-protein|Name=TCONS_00002147-protein|organism=Clytia hemisphaerica|type=polypeptide|length=591bp
MVKESKAMDRIILTSVKIKCLQAQLGCDWQGELSSVEKHEEKCKYKSIQC
SNKGCRSEMMRMNLLKHLNNCQYQIVACEFCATKVPQIDMEDHRIDCDFC
PKKCPNENCQVKIRNTELDAHLEQDCQYEPVECRYSAFGCEDKIKRIDMK
LHLDESVHDHMSLLFKSNQDLEKSHRETKQELDDAQQRLVKTTMVLKEFN
EMLNQTRRELEATKREFAAFRKETSEKIAEQDAQLEKYKNQPRAPTPTRI
EPLKSPRDSPVSKSPRQSPEPGTNIPIGRKSPEPVKERRTPSPTSDDKKG
GILKKAKSADNLTTAGRSSSPVTLKLFLKKSDSPINVTRSDSNASSSSSS
SAGSTNPPPPQIVSKNPLSPLTPLSPMSPTKRVSPPPPGAKDLPDEPRSP
QNGETTLQRKRQAAIKPIITRPSTPLQSIIDAMNNSPINDYPQHFHAMMQ
NMEPDRFYVVNGDLLIKVNTFGSLRPYAVVYVQPWEERSRKVFQEMRLNK
RTKHHSERVCIEANSQVGIVKLLVNCTLQDTIVSVVCTQQNTAFLPSYIE
TMGWGFQVPAGLHRNAFFHQENMLLRLRQRIPDVERMAAGM
Run BLAST on NCBI

transcript from alignment at sc0000018:600947..606993-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002147 ID=TCONS_00002147|Name=TCONS_00002147|organism=Clytia hemisphaerica|type=transcript|length=6047bp|location=Sequence derived from alignment at sc0000018:600947..606993- (Clytia hemisphaerica)
TGCTAAGGAATAAGAAGTCAAAAAATGGTAACTTGAATTTATTTTTCAGA
GAATTTATAAAAATTGAATTGCTGAGAAAAATTCGTTTTCGTATTAGATT
GGGTTTATAGTTATCGTAGATTTGGGTTTTTAAAACACAGAAAATGAAGA
TGAAATTTCTTGAAATTTTGATAATTCTTTTTGCTCACTGTAGGTGAAGG
AAAGCAAGGCAATGGACCGAATCATATTGACATCAGTGAAAATCAAATGT
TTACAAGCACAATTAGGATGTGATTGGCAAGGTGAACTATCCTCAGTTGA
GGTAAGAAGAACAGACTTTTCAGGGTGTGTCCCCGAAAATGTACTCTATA
ACCAGAGTGTATCTCACGTTTATCGTTTCGTAGTACCTAGTAACTCTACG
GCAATGAATTTTGAAATCAGCCGTAGATATTGGGTCTGTGTACAGACTAC
CGAAAATGATGTAACGAGTCCAACCACTGGAGAATTCTTAATGTGTCTCA
ATGAATTCTACAGACATATTTTTCTATGTCATTTTAGAGAATTGATTTGA
TGAGAAATATGTTTTAGAAAGTCTATGCACTCAAAAGCTTATGGACGAAA
CATTTTTCACCGAACACCTTGATTGTGATTTTAATATTTGATTCGACTAC
ATTGATGCCACGAGAAACTATGCTTAGAATTCCTTTCCCAGTCACAGGTT
AAGTAACTCATAAATGACTAGACTGTCAATATAAGCTAGATAATATTAAC
TAATACATAGCTACTGAAGAAGGTCTCTTGCCGTAAACTCTATTTGATTC
TTCCAGATTCATTCGAAATATACGTCACTATTGACTTGTTGGAAAGATAT
CTATGAGTGGTAAAAGTGACTTCAATGAAATGTCGTTTTTTTTTTAGAAA
CACGAGGAGAAATGTAAATACAAGTCTATCCAATGTTCGAATAAAGGATG
TCGTTCAGAAATGATGAGAATGAACTTACTAAAACATTTGAATAATTGTC
AATATCAAATTGTTGCATGTGAATTTTGTGCAACTAAAGTACCACAAATT
GATATGGAGGTATGGTTGATTCCTTTCTACTATATTTACTGTATTTTTAA
GCATCTCCTCTGCCCATCGGGTACAAGAACAATAGCCCTATGTTTTGAAG
AATCTTAAGTCCAGTCTGGCCAAGAGAAAGTCCTTCGCTCGAGAGGAAAA
AACTGTTGAGTTGAGGGGGATTTTTCCTTGTTTTTGTATGTTTTTTCTTT
GCAACTTGCAAGTCTAGTAGGTTGATGCAAAAGAATATCTTCTTCAAATT
TAAAACAATGCCTAGGAATTCTGATTTTGCTGACGCGTGATAAATAAACG
ATAAATTCAGCTGGGACACCCGGAGAAAGAATTTATGATGATAACAGTCC
AAAATTTAATTTGAAAAACATGAAAAATCTTCATTAAAATACAAAATAAT
TTTCCTGACGAGTGATTAGCACACTAATGTTTAATTAACAGTTGTAAAAA
GAGAGTACAATGGAAAAAGCAGATTAACTTAATTAAATACCTAATTATAT
GTGGGCGACTGTTTAAGGGAATAATATCATATTTCTCGGCTGTTTTATTA
AAGCTGTATCTAGCTGTCTTCTATTGTATTTCATTTGATTACATAAGCTA
ATTTCCTGGACAAGTGATTTTTCGATGACGAGTCATATTATTGTATTTGT
ACAAAACGACTCATTAATTAATTTGTTGATATTTGCTTTCTTGAGATTTA
TAGTTCCTGTAACTAACCAGGGTTTCTTAGTGTTACTGATCTTTAATATT
ATACATGGCGCGTCTCGTAAGCTTCAATCTTAATCCCCAATATTGTAAAC
TTCCTTGATATAAAGTCTCATCAAATGAGATTTCTAAAGTCTACCTGTGA
TTTCGTCTGTTACACGTTTTTTTAGAAAGAACATTTTTGAAGCCTTCGGA
TTTTCTGAACTTTTTGAGTTTTAAGCCTAAAAATGTTCTTAAGATATGTT
CTTAAGATGTTCTTATTAAATTGACCATTTTGTGAATATCTTTTACCATA
TTGCTAAGAAATTTTTTTGAGTCCACAAAGCCTTAAAATGATCTTAACTT
GTTCTTAACATAAGCCTTATGTTCTTACATAGTTTGTTCTTACAAAAAAA
CGTTCGTATTGCTTGCATTGTATGTGATTTTAAAGTGTTTTGAAAGAATA
CTTATCATAAGGAAAGTTACTGCCATTACAGCATTCGAAAACCCTAGTTT
ATGAAACTGTCTAGTGTATTGACAGCTACGCCCAAGTTTCAAATCACAAA
TCATACAAATAATTTTTCACAGTTGAAGAATTTTTCAAAATTTCAAATGT
TGAATTCTAACTTTTATTCTTTTTAGGACCATCGCATAGACTGTGACTTT
TGTCCGAAGAAATGTCCAAATGAAAACTGCCAAGTCAAAATTAGAAATAC
AGAGGTAGTTATTGATGATGTATTTCTATAACAACAGCAATACTTTTAAT
TGTTTTTCAGAATAATTATGATAGCTGGCATACCTTGGTTTAAATGCCCA
AAATAAATAAAGGGCAATATTGTGCTGTCTATTCTTGGCACTATTAAGTA
TTGTAAAGAAATTTGAGGCATTTTAACAAAGAGCATCTCTACTACATTTG
GTCTTTGTTATTAAGAGCTGATGTGGCCATTGAGTGGTGAGAGCTGCTAG
CATCGAAAAAAGGTAATTTTATTACGTTTTTGTTTTTCTTTAACATAGCT
TGATGCACATTTGGAGCAAGATTGCCAATATGAGCCAGTGGAATGCAGAT
ATAGCGCATTTGGTTGTGAAGATAAGGTAAATTGAAATAATACGTTTAGT
AGATCCTCTTCCTCGCGCGAGGGGGTCTATCTAACAAATCCTGCATTACT
AAAAATAGACAAATTTCATAAAGAAGGACAAACAAGAACGACAAATTTCA
TAGTTTGCCGTCTACAACCCCGACCAAAAGTGGCTGTACCACCCCTACAG
ATTCTTCTTTGTTTATCACTGGAATTAACTACATGTGGTTTAAAAGAACG
ACAATTTACGCATGCGTGTTATTCATGCAGGAATTACAAGACGAACCTAC
TGACGTACATGATAGTGACATTTTAATACTCAGTTTGAACTGACCAATAA
CAAACTTGGAATTAAATTAACTTAACTAAAGAAGAGAAATTTAAAATTCA
TTAAGGTTAAATTCTACAACAAATCGGGAACATTTTTGGCTCGTTTTTTT
CAAATCACCCTTAACTTTAAAATCCCGCCGATGAAAATGCCAAAACTTAG
ATTCCTTAAAAATCTGTATAAACACAGGCAAGTCAAATGCAATTGAAGTG
TATTAGTAGTCGCCAGTGGAATTTAAACTACAGTAGGTCATTGCCATCGG
AGACGGTTGTGTGCATACATATCAATATTAACTTTTCCTAGTAACCCACT
GGTTACCTTTTAACAAAAAGGAAAATGAAAATGAAGGAGAAATCTCATTA
TTATAGTCTTAAAACCTGGTTTTTAGACAACTTCCTTATGTGTGTTTAGA
ATAGTCTAATCTGGATTTAAGCTTAAAACAACCGGCCGTCGAATGGATGT
TGAAAAGACGACGAAAGAGGATGTGTTAATATAAGACTGAAAACAATGTG
AAACATTGGAAATGAACTCTTTAATCTATATATCTTTATTTCTTGACCTG
CTTATATAATTACAAAATAGATGTAATTAAGTACAGATCAAAAATATATT
GTATTGTCAAACAACACCGTACTGTTGTCAACGGTTTCCAAGGCTAAACT
AATTGATCAAATTGATTCGAAAAGGAAATTATTTTGTCGCATCTATTCTC
TTTCATTCAATGAAAACAAGTTATATAGAAGATTTCGTGTTTACTGTTTC
AATCTAAGGAATTTCAGCTTATCCTTTCCCCATAATCCCTTGAAAAAAAA
CTATAAAGCAAGATACAATACTTAATTTCCAATCAGTTGATTTTGTAACC
TAATTGCATTAATTTGACACAGTAAGAATATAACTTCATTTTTACAGAGG
TATGATAGAAATAGTTTATGGGGCAATTTAATTTGTTTTCTTTTTTTTTT
GTTGACGATGTATAAATTTCTTAATTAGCAGGATGACTAAATGAAGAGAA
AGACAATTTTGAAATTTTCTGTCATGAAAACAATTTTCTCAAATTAGAAA
AAAAGCTGAGTGGGGTTTGTGGTATACAGCTTTAGAAACCTTCTTTGATC
GACGTTTTCTGGAAAACAGTTAGTGGAAATTCTAGCGATACTTCGTTCAA
GTTAAACAAAGTGCTTTCTTCGTGTGTGATTATAATCAACTTTGAATAGC
AATTCAGATAGCAATTTTTTAAATATTTTTCTTGTTCTACTACAGATAAA
ACGAATCGATATGAAGCTCCACTTGGATGAATCAGTACACGATCACATGT
CATTACTTTTCAAGAGTAACCAAGACCTTGAGAAATCTCATCGAGAAACA
AAACAGGAGTTAGATGATGCTCAACAACGATTGGTCAAAACAACAATGGT
GTTGAAAGAATTCAATGAAATGTTGAATCAAACACGACGAGAGCTTGAAG
CAACAAAACGTGAATTTGCAGCATTCAGAAAGGAGACATCTGAGAAAATA
GCTGAACAAGATGCACAATTGGAGAAATACAAGAATCAACCAAGAGCTCC
TACACCAACCAGAATTGAGCCTCTGAAATCACCACGTGATAGTCCAGTCT
CCAAGAGCCCAAGGCAAAGTCCAGAACCAGGCACCAATATCCCAATCGGT
CGCAAGTCACCAGAGCCTGTTAAGGAGCGAAGAACACCTTCTCCAACATC
AGATGACAAAAAAGGAGGAATCTTAAAGAAAGCGAAATCAGCTGACAACT
TAACAACAGCTGGACGTAGCAGCTCACCTGTCACATTGAAATTATTCTTA
AAGAAATCTGATTCTCCTATTAACGTTACACGTTCAGATTCGAACGCGTC
TTCTAGTTCCTCGTCATCGGCCGGCTCCACCAACCCGCCGCCTCCTCAAA
TCGTTTCCAAGAACCCGCTTTCTCCATTGACTCCTTTGTCACCAATGTCA
CCAACAAAGCGCGTCTCTCCTCCACCACCAGGAGCCAAGGATTTACCAGA
CGAGCCAAGAAGCCCACAAAACGGCGAAACCACGTTACAAAGAAAACGCC
AAGCCGCCATTAAGCCTATTATTACACGCCCATCGACGCCACTTCAATCG
ATAATCGACGCGATGAATAATTCACCCATTAATGATTATCCACAACATTT
CCACGCCATGATGCAGAATATGGAACCAGATCGATTCTACGTTGTCAACG
GTGATCTTCTCATCAAGGTCAATACGTTCGGATCGTTACGTCCGTACGCT
GTCGTTTACGTGCAACCGTGGGAAGAACGTAGCCGTAAAGTCTTCCAAGA
AATGCGTTTAAACAAACGTACAAAACATCACAGCGAACGTGTCTGTATTG
AAGCTAACTCACAAGTTGGAATTGTCAAACTTCTTGTTAATTGCACTTTG
CAAGACACAATCGTATCCGTTGTTTGTACACAACAAAACACAGCTTTTCT
TCCCTCCTATATCGAAACTATGGGATGGGGCTTCCAAGTACCTGCTGGAT
TACACAGAAACGCATTTTTCCATCAAGAAAATATGTTGTTGAGACTCAGA
CAACGTATTCCAGATGTTGAGAGAATGGCAGCTGGTATGTAAATAAACGA
ACACTTTTTATAATACGAATTTGGGACAAAGTCTTACAATATTGTGACTA
TGGTATTATTTTTTCTCCTATGTATTTTTTTTAAAGAAAAATGACATTTT
TTTATTGCATGATTTATATTTTATTTTTGGATTTTTATTTTTTAACAAAC
AATGTGTAAATACTTTTCTTTCTTACCTTTTTACTAATTGCTGGCAATAA
TGATGATTTTTATAAATATGATTTTGAACCGAAGCAGGGTCTAAGCTAGC
AACAGTGTTCTCAAAATACCTACTCTTGTCTCCCGAATAGACGTCCC

Coding sequence (CDS) from alignment at sc0000018:600947..606993-

>TCONS_00002147 ID=TCONS_00002147|Name=TCONS_00002147|organism=Clytia hemisphaerica|type=CDS|length=1776bp|location=Sequence derived from alignment at sc0000018:600947..606993- (Clytia hemisphaerica)
ATGGTGAAGGAAAGCAAGGCAATGGACCGAATCATATTGACATCAGTGAA
AATCAAATGTTTACAAGCACAATTAGGATGTGATTGGCAAGGTGAACTAT
CCTCAGTTGAGAAACACGAGGAGAAATGTAAATACAAGTCTATCCAATGT
TCGAATAAAGGATGTCGTTCAGAAATGATGAGAATGAACTTACTAAAACA
TTTGAATAATTGTCAATATCAAATTGTTGCATGTGAATTTTGTGCAACTA
AAGTACCACAAATTGATATGGAGGACCATCGCATAGACTGTGACTTTTGT
CCGAAGAAATGTCCAAATGAAAACTGCCAAGTCAAAATTAGAAATACAGA
GCTTGATGCACATTTGGAGCAAGATTGCCAATATGAGCCAGTGGAATGCA
GATATAGCGCATTTGGTTGTGAAGATAAGATAAAACGAATCGATATGAAG
CTCCACTTGGATGAATCAGTACACGATCACATGTCATTACTTTTCAAGAG
TAACCAAGACCTTGAGAAATCTCATCGAGAAACAAAACAGGAGTTAGATG
ATGCTCAACAACGATTGGTCAAAACAACAATGGTGTTGAAAGAATTCAAT
GAAATGTTGAATCAAACACGACGAGAGCTTGAAGCAACAAAACGTGAATT
TGCAGCATTCAGAAAGGAGACATCTGAGAAAATAGCTGAACAAGATGCAC
AATTGGAGAAATACAAGAATCAACCAAGAGCTCCTACACCAACCAGAATT
GAGCCTCTGAAATCACCACGTGATAGTCCAGTCTCCAAGAGCCCAAGGCA
AAGTCCAGAACCAGGCACCAATATCCCAATCGGTCGCAAGTCACCAGAGC
CTGTTAAGGAGCGAAGAACACCTTCTCCAACATCAGATGACAAAAAAGGA
GGAATCTTAAAGAAAGCGAAATCAGCTGACAACTTAACAACAGCTGGACG
TAGCAGCTCACCTGTCACATTGAAATTATTCTTAAAGAAATCTGATTCTC
CTATTAACGTTACACGTTCAGATTCGAACGCGTCTTCTAGTTCCTCGTCA
TCGGCCGGCTCCACCAACCCGCCGCCTCCTCAAATCGTTTCCAAGAACCC
GCTTTCTCCATTGACTCCTTTGTCACCAATGTCACCAACAAAGCGCGTCT
CTCCTCCACCACCAGGAGCCAAGGATTTACCAGACGAGCCAAGAAGCCCA
CAAAACGGCGAAACCACGTTACAAAGAAAACGCCAAGCCGCCATTAAGCC
TATTATTACACGCCCATCGACGCCACTTCAATCGATAATCGACGCGATGA
ATAATTCACCCATTAATGATTATCCACAACATTTCCACGCCATGATGCAG
AATATGGAACCAGATCGATTCTACGTTGTCAACGGTGATCTTCTCATCAA
GGTCAATACGTTCGGATCGTTACGTCCGTACGCTGTCGTTTACGTGCAAC
CGTGGGAAGAACGTAGCCGTAAAGTCTTCCAAGAAATGCGTTTAAACAAA
CGTACAAAACATCACAGCGAACGTGTCTGTATTGAAGCTAACTCACAAGT
TGGAATTGTCAAACTTCTTGTTAATTGCACTTTGCAAGACACAATCGTAT
CCGTTGTTTGTACACAACAAAACACAGCTTTTCTTCCCTCCTATATCGAA
ACTATGGGATGGGGCTTCCAAGTACCTGCTGGATTACACAGAAACGCATT
TTTCCATCAAGAAAATATGTTGTTGAGACTCAGACAACGTATTCCAGATG
TTGAGAGAATGGCAGCTGGTATGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001120XLOC_001120Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002147-proteinTCONS_00002147-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002147-exon-sc0000018-1575043694:606967..606993TCONS_00002147-exon-sc0000018-1575043694:606967..606993Clytia hemisphaericaexon
TCONS_00002147-exon-sc0000018-1575043694:606693..606800TCONS_00002147-exon-sc0000018-1575043694:606693..606800Clytia hemisphaericaexon
TCONS_00002147-exon-sc0000018-1575043694:605935..606096TCONS_00002147-exon-sc0000018-1575043694:605935..606096Clytia hemisphaericaexon
TCONS_00002147-exon-sc0000018-1575043694:604540..604617TCONS_00002147-exon-sc0000018-1575043694:604540..604617Clytia hemisphaericaexon
TCONS_00002147-exon-sc0000018-1575043694:604168..604245TCONS_00002147-exon-sc0000018-1575043694:604168..604245Clytia hemisphaericaexon
TCONS_00002147-exon-sc0000018-1575043694:600947..602598TCONS_00002147-exon-sc0000018-1575043694:600947..602598Clytia hemisphaericaexon
TCONS_00002147-exon-sc0000018-1510915933:606967..606993TCONS_00002147-exon-sc0000018-1510915933:606967..606993Clytia hemisphaericaexon
TCONS_00002147-exon-sc0000018-1510915933:606693..606800TCONS_00002147-exon-sc0000018-1510915933:606693..606800Clytia hemisphaericaexon
TCONS_00002147-exon-sc0000018-1510915933:605935..606096TCONS_00002147-exon-sc0000018-1510915933:605935..606096Clytia hemisphaericaexon
TCONS_00002147-exon-sc0000018-1510915933:604540..604617TCONS_00002147-exon-sc0000018-1510915933:604540..604617Clytia hemisphaericaexon
TCONS_00002147-exon-sc0000018-1510915933:604168..604245TCONS_00002147-exon-sc0000018-1510915933:604168..604245Clytia hemisphaericaexon
TCONS_00002147-exon-sc0000018-1510915933:600947..602598TCONS_00002147-exon-sc0000018-1510915933:600947..602598Clytia hemisphaericaexon
TCONS_00002147-exon-sc0000018-1491911889:606967..606993TCONS_00002147-exon-sc0000018-1491911889:606967..606993Clytia hemisphaericaexon
TCONS_00002147-exon-sc0000018-1491911889:606693..606800TCONS_00002147-exon-sc0000018-1491911889:606693..606800Clytia hemisphaericaexon
TCONS_00002147-exon-sc0000018-1491911889:605935..606096TCONS_00002147-exon-sc0000018-1491911889:605935..606096Clytia hemisphaericaexon
TCONS_00002147-exon-sc0000018-1491911889:604540..604617TCONS_00002147-exon-sc0000018-1491911889:604540..604617Clytia hemisphaericaexon
TCONS_00002147-exon-sc0000018-1491911889:604168..604245TCONS_00002147-exon-sc0000018-1491911889:604168..604245Clytia hemisphaericaexon
TCONS_00002147-exon-sc0000018-1491911889:600947..602598TCONS_00002147-exon-sc0000018-1491911889:600947..602598Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:600947..606993 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.018247	0.0423731	0.0414555	5.07204	3.70889	10.2243	14.887	24.961	22.5197	13.4599	29.5474	64.0155	43.7475	56.5262	36.6932	3.93314	24.5768	0.914993	1.08236	0.651302	0.9001	0.107273	0.117033	0.100451	0.304809	0.0769731	0.0273826	0.0207687	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001293Znf_TRAF
IPR008974TRAF-like
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002147 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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