TCONS_00002277 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002277
Unique NameTCONS_00002277
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2163

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002277 ID=TCONS_00002277|Name=TCONS_00002277|organism=Clytia hemisphaerica|type=transcript|length=2163bp
TAGTTTGGCTTATTACAATTGTTGGAATTCGGATCATATCATTTGGCTAA
TGATCATTCCGTGTGTTTGCTTGGCTGCGATTTCCATGAAATTCATAATA
TCAAGCAATTTATATTGCAACAAGAAGAACAAGAATGATCTGCAGCTTGC
TTCTTTAAGATATTTTGCAAGGACAAATATTGTGATGTTGGTTTTACAGA
CCATGTTATGGGTTTGTCTTGTTCTCACATTTTGGTATCCAAAAGAAGAA
ACATTCCATTCCCTGTTTGGTGTCGTCACTTCGCTAAAGtctgCTATTAC
ATTCTTCATGTATGCTATAACATACGTTGAGATGTACAGGCATAATGGTT
ACCATGACATCCAGACCGAATATTACGAAGACCAGAATGATGATGGTGCA
ATTAAAATGGATCCACTTGAACATGAAGTCAGCAATCAGAATCTAAAGGA
TGTAGAAACAGAGCAAACAGGAAGAATAGAAGCTGTAGAGTTCAATGGGT
TGGGCCAACAGAACAACCATCATATACACACACCACAAAAACTCACCCAT
GATAAATCACCTACTACACCACAAAAAGATGTCGTTCAACCTTTTGAAAC
AGGAGCTTCGGAGGGCGGACCTGTTAAAACAACTGAAACGCCCCCGCCCA
CACCAATCGAAGAGACAGTGCTTGTTCACCATAAACCTAAAAACGAGgAT
GAAAATCAAAACCATCAAGACGACGAAGACTCCAGTACAACGAATCTCGT
AGCTATGACAACTAAAGACGAAGATACTTTTGATTCGTTGAAAAGGGGGC
ATGGGGCGAGTGTAACCAGTAACGACAATATCAATGATACAGGAAGTGAC
GCCGAATCAAAATCCGTCAAAAGTACCAACACTGATATTACCGATATCAG
CGTCGACAAATCAAACAGCACCACACCTGTAAGGGTGGAAAAAGGCGTTG
AAGAAGAGAGTACAAAACCTACACAAGAACGCCCATCTCCTGCGCTAAGC
GCTGGAAGAGAGAACACTTTCCCAAGCCAAACCACGATCAGCAGTAAACA
AGAGACGCGACCAGCTTCTCGAATTTCTAATGTCTCTTTTACAAGTCAAA
TGGGGATGAATGAgCTTGAAAGTCTATTCAACAATCCTGACTTATTGAGC
CAATCAAATTGGAAAGCACGAAGTAAATCACATGCGTCGCCCAATAGAAT
GGCGACAGAAACAGCAAGGCAGGAGGTGCAACAGAAAAAAGTCGAAACAA
AAACcattaatgaaaataaagaggACGATTCAACTGAAGAAAATAAAGCT
AAGAACAATGACACACCGTCGACAAAGCGAAGTAAAAAAGATAGTCGGAa
tgaatttttcgatttcaactGATGACAGCCTGAAGATTCCAAAAGAAAAC
ATGGCATCAATGCAGAATAACAGAAGGTGAAAAAGTCCGAAGCCTCAATC
GTGTGGTTTTTAGCATTGCTTCCACAACAATGGTGCCGCTATAAATTGGG
ATGCGTGGATAAAGTTCTGTAAATTCTGAGAACCATCACCGAAAGATTGA
CCTAAATTGATAAAACGTTTTAAAGTCGTGTCGAGAGTTTAACAACCTTC
GAGACATTTACAACAACGTTTACATGATATTGCCAGTGATACACAATTTA
AAAATACGGGGACCTGAATAAATGGAACATTACAAAGATggaaaaattaa
agaaacatTTACCATAAAAACACTAAGAATCCCAGACACTCCTCCTGAAC
GATTCATTGAAAGGACAATCCCCCGACCGTACGATTTCCCGAGTTGTCCG
GTCGGGGAGTTTTCTGTCAGGGAATTATCCGTCGGAAAATGGTTGGTCAG
GGAACCGTCAGCCGGTGAATCATCAGTTCGGGAATTTTCCTGAACGGTAA
ACAATAAATCCAAAGCTGAGTTATGAAATATATCATGGACTTAAATAAAG
TTTAAGTGGACTTAAATAAAGTTTAAGTGCCCTGTACATCGTTGTCTGTG
TGGACCAAcgaaatttttttatatgttgTGGGTTGAGTACATGGATAAAC
GTAATGGTTTTTATGGGTAGTTGTTGcgttcaaaattaaattttgtctAT
CATTTTACTGTTTGTATTATTTATATTAATGAAACTGGTAAAAATTGATT
CCATAATTTTTAG
Run BLAST on NCBI

protein sequence of TCONS_00002277-protein

>TCONS_00002277-protein ID=TCONS_00002277-protein|Name=TCONS_00002277-protein|organism=Clytia hemisphaerica|type=polypeptide|length=456bp
SLAYYNCWNSDHIIWLMIIPCVCLAAISMKFIISSNLYCNKKNKNDLQLA
SLRYFARTNIVMLVLQTMLWVCLVLTFWYPKEETFHSLFGVVTSLKSAIT
FFMYAITYVEMYRHNGYHDIQTEYYEDQNDDGAIKMDPLEHEVSNQNLKD
VETEQTGRIEAVEFNGLGQQNNHHIHTPQKLTHDKSPTTPQKDVVQPFET
GASEGGPVKTTETPPPTPIEETVLVHHKPKNEDENQNHQDDEDSSTTNLV
AMTTKDEDTFDSLKRGHGASVTSNDNINDTGSDAESKSVKSTNTDITDIS
VDKSNSTTPVRVEKGVEEESTKPTQERPSPALSAGRENTFPSQTTISSKQ
ETRPASRISNVSFTSQMGMNELESLFNNPDLLSQSNWKARSKSHASPNRM
ATETARQEVQQKKVETKTINENKEDDSTEENKAKNNDTPSTKRSKKDSRN
EFFDFN
Run BLAST on NCBI

transcript from alignment at sc0000019:774278..786062+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002277 ID=TCONS_00002277|Name=TCONS_00002277|organism=Clytia hemisphaerica|type=transcript|length=11785bp|location=Sequence derived from alignment at sc0000019:774278..786062+ (Clytia hemisphaerica)
TAGTTTGGCTTATTACAATTGTTGGAATTCGGATCATATCATTTGGCTAA
TGATCATTCCGTGTGTTTGCTTGGCTGCGGTaagaaacttttaccattac
acgttttttataagaacaaactatataagaacataaggcttcgatggcca
aaatattatttCGAACAAGTTAAGATATCAAAGGACTCTAAAACACACTA
CCGCGGTCGTTTGAGCCGgctgttcttaatatttcgagCCATTTTTggtg
gttggtaaaataccgTAAGCGTATTAAAAACATTTcgaaaatatttaaca
tttaaatttaaaaattgctgCAGAGCCTCCGcctaaatttatgaaaaata
tgtACAGTGtcaactttctctaattcgaacctctactattcgaatctttc
tataaatcGAACCAAAATATTTGTCCCCTCAGCTAGAAATTAGTAACAaa
gttttgtaattcgaatctctctcaAATTCGTAAAAAAATTCTTGGTCACT
TGAAGATTTTGAATtagaattagagagagtcaactgtatttcgTGTCTCG
AAATATAAACACGTTTTACGCCTCTTTCATAGATTTCCATGAAATTCATA
ATATCAAGCAATTTATATTGCAACAAGAAGAACAAGAATGATCTGCAGCT
TGCTTCTTTAAGGTAGGCGGTAGCAGGGGCGTTTGTATTATAAATAAAAT
CTCTAGGATTTATAAGATGGTAGAACAGCGTAGCACCATAGTCATAAtaa
aaaaaccccggtctggcaatgtattgttttagctttttgttcatttttct
tttgttgcaaacaaaaggcaagttgcgatttgcatacctTTTGAtaacgt
taccaaaatctcctcttgggattggtctattttccaatcacatgatcaaa
aagtttgcaaaataaatcgattttggtacgtaacTTCCATCttataacaa
taaaaagagacaaaagccacTGTTTTTATAATGAATATGGTAGAACTTAG
AATCACTGTCAATATCAGATATTTTTAAGTTCTTAGTTCAAGTCCAGGGG
GGGAGCACTTAGGCAAACTTGAGTACTAGGACGTGCCGCTGGCCaaggtc
ccttttttaggctctaaAGATATCTGATAAGGATCCAAATTTACTAATAT
CCAAAATATGTATCTGAAAGGGTCGACtattagtaatttttttaaattta
tagggtggaaatttttaaattttttcgtcTACCTTTGGTCATTTTGGTCA
CTTTTCAGAGTGAAAATGGGGAAATTTATCTATTTTTAGTTCTGCAGGAT
CCCAAATTCAACAAATNGACATCaaaggtgccaactctcacgcattgagT
GTGAGACTCAAGCATTTccacattttggattttttttaaaaatttttcct
gtttttccgatttttagaaaaaagttttcccgatttgCCGATTTGCCGAa
aaaagtttccccgatttcctgatttttggaaaaaatgtttacccggtttt
ctgattttttccaggtggttttgttttttttacaggtACTACCTGGTAGT
Aaatagggggtatggggtggttttgggatttttccatgtagtatagtgta
cttcaggggtgggtgggtgtcaagtNTTGCTTGGCTGCGGTaagaaactt
ttaccattacacgttttttataagaacaaactatataagaacataaggct
tcgatggccaaaatattatttCGAACAAGTTAAGATATCAAAGGACTCTA
AAACACACTACCGCGGTCGTTTGAGCCGgctgttcttaatatttcgagCC
ATTTTTggtggttggtaaaataccgTAAGCGTATTAAAAACATTTcgaaa
atatttaacatttaaatttaaaaattgctgCAGAGCCTCCGcctaaattt
atgaaaaatatgtACAGTGtcaactttctctaattcgaacctctactatt
cgaatctttctataaatcGAACCAAAATATTTGTCCCCTCAGCTAGAAAT
TAGTAACAaagttttgtaattcgaatctctctcaAATTCGTAAAAAAATT
CTTGGTCACTTGAAGATTTTGAATtagaattagagagagtcaactgtatt
tcgTGTCTCGAAATATAAACACGTTTTACACCTCTTTCATAGATTTCCAT
GAAATTCATAATATCAAGCAATTTATATTGCAACAAGAAGAACAAGAATG
ATCTGCAGCTTGCTTCTTTAAGGTAGGCGGTAGCAGGGGCGTTTGTATTA
TAAATAAAATCTCTAGGATTTATAAGATGGTAGAACAGCGTAGCACCATA
GTCATAAtaaaaaaaccccggtctggcaatgtattgttttagctttttgt
tcatttttcttttgttgcaaacaaaaggcaagttgcgatttgcatacctT
TTGAtaacgttaccaaaatctcctcttgggattggtctattttccaatca
catgatcaaaaagtttgcaaaataaatcgattttggtacgtaacTTCCAT
CttataacaataaaaagagacaaaagccacTGTTTTTATAATGAATATGG
TAGAACTTAGAATCACTGTCAATATCAGATATTTTTAAGTTCTTAGTTCA
AGTCCAGGGGGGGAGCACTTAGGCAAACTTGAGTACTAGGACGTGCCGCT
GGCCaaggtcccttttttaggctctaaAGATATCTGATAAGGATCCAAAT
TTACTAATATCCAAAATATGTATCTGAAAGGGTCGACtattagtaatttt
tttaaatttatagggtggaaatttttaaattttttcgtcTACCTTTGGTC
ATTTTGGTCACTTTTCAGAGTGAAAATGGGGAAATTTATCTATTTTTAGT
TCTGCAGGATCCCAAATTCAACaaatattcatatctgacagggtctattt
tttcaaacttcagcggcacgtccccgttgGCCTCCAAGGTCAGTACCCCT
TCCATAATCTTGTTTTGCATGTACCAGGCATCTTAGTTAATAACATAGCG
CGCATTACGTGTATAAGCTCACTACAGTCAGgagggggggtcagtgtacc
agaaggtggcatgtatcctggggtgggtgggtgtttgagaaaaaaatttg
tcatgtattacctgtgtactataattggggtgttgggtccaaaattgatt
ttgatttttactacctgtgtaccaaaataggggtgttgggtccaacaTCG
AttctgatttttactacctgtgNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATACATGCCGCCTt
ctagtacactgaccccccctgcTACAGTGAGTGTCGATATTTCTGAGATA
AAAGCGTTGTTTCAAAGTCAAAGCTGGCTATAATATGAAAAATTACGTCT
TTCGTCATTTTTTTAACTCAGATATTTTGCAAGGACAAATATTGTGATGT
TGGTTTTACAGACCATGTTATGGGTTTGTCTTGTTCTCACATTTTGGTAT
CCAAAAGAAGAAACATTCCATTCCCTGTTTGGTGTCGTCACTTCGCTAAA
GGTCAGTATGTTGTAACAATGGTTTACAGAGATCGCTTTTCAACGATCAT
ACAAGAATGCACTTTATAAGAACTTATTCATAATGAaatttggccacaaa
aataataaggatatgttaagaatatcaccaCCATGGAAATTAGCCCCAAA
TTGACGAATGAGTGACCtctttaaaaaagtattttgttaCTTTTACCTCA
TATGCTAAGAaactttcattcaaaaaagaacaatcagatcaaaagttaag
gggtagTACAGGAAAAAAAACCCTCCTAGTTCAGCCCCTAAAAACctgta
tgaatagggttaaacaaGTATTGCTTGTGTCAACTAGGGTAGTTACGGGG
CGTTGAATCTCTCTAATTCGGTCTTCAAGggtccaagaattttcttcgaa
tttaaagaaagattcgaattacagaaattattttatactaatttctAGTT
GAGAGGAGCAATAATTTTGTTTggattagagaaagattcaaatagcagag
gttcgaattagagcatattaaagaaatattttctgttttttttttcagtc
tgCTATTACATTCTTCATGTATGCTATAACATACGTTGAGGTAAGAATCC
CTTCGCAAAATCTATTCAAAACTTCCACCAAAAAGCTTTTGGAAGCTGTT
CATACGTTTTTCCCGACTAGGTGGaataaattacataaatcatgctattg
ttttagcttttaacGAATTGAATCTCCTGTAGGTCACGTAACACCACATT
TGAAGATTATCCAAACTCTTGGATTACCTGACTAAAAAGCAGTTAGGCGT
AGCCTAAGGATAGTTTTACCCAACATTTTTGAGCTTGCCAATGAAGCTGA
ATATTCTATTAACACCTTTTTAACTTagatctttttttcaaaagtgcaAG
GGATATATTGAACAACTTTCATATAAACATAAACTTTATAAACATAACAC
AAAGCCGACATTGTTATGCAAAAAGCAAAGGACTGAATTTTGATAAAGCG
ATGAAAATCTAAGCGCATATAAGTTTCTTCATCAATCAACTTTGTAGTAT
AAATTAAACTAGTACAGCTAGTGTCAGTTTTCGTTTGTGATTAAATCTAG
ATGTACAGGCATAATGGTTACCATGACATCCAGACCGAATATTACGAAGA
CCAGAATGATGATGGTGCAATTAAAATGGATCCACTTGAACATGTAAGTT
ACAGGTCCTTAATTATTACCGTGTCAGAACCTGTCAGAGCccaattttag
taatttcaaaTTGTCATATTCCGACTTTGGAATagaactttaaaaaatat
ttggacATTTTGCTCAAGACAAAGGAACAAAATATACACGTGAAATATCT
AAAACACCATCTGATTAtgcctttaaaaaaatcttgtcatCATTCACTTT
AGGAAGTCAGCAATCAGAATCTAAAGGATGTAGAAACAGAGCAAACAGGA
AGAATAGAAGCTGTAGAGGTAAGAAGACGCCTTAAAGTGGTCAAAATACT
CCAAATTAGGATTAAAATGTGTGTTGAATGCAGAAAACGCTGCAATGTAC
TGATAACTTCTTTCTTATTCTTGTGTTTCTCTGCACAATTAAGAGTGTTC
AATACTTAATTAGAGCTTGTTACATAAAAATAACGGTGCATTTCTTCACA
AAACTTCCAGTTGTTTGcttacgcattcatcagttgattagaaataattt
ttttccattaaaaaaaacgtaGAATTTCAAGCCTAAATTatcaaattgaa
gaaaatagATAAACGAGCATCTCATTTGCAATAAAGCAAGTATTAGCTCA
CCAAAATTCATATTGAATGAGCACAGAATAAAATAGGGTCGCAGCAATAA
AGCCTTTTATGGCAAAAAGACAAAGCACATAGTTGTATAAGTCACCTTTG
AGTGGGAGTTAGTACATTTTCATTGAAAGTTCcctaatttcaaatcaaaa
tttcaaaagatgctTTTCTCAAAGTATTTTTCGCCTTTTAAggtcatttt
tgttttgagaaaaGGGAAATTTACCCGTGCGGAGAAAATTGTGAAAACCA
CGACATAATACTAATACAATAACAAATTTCTCTAGGTAGCGTTTGTCTCT
CTGATTTTTTTCGCAAGTATAAATGAACAGGACCTGAAGACAGCTACATT
TCAGAAAAGAAATGCATGTGGGTAGTAGTTgagcattttttttttcactt
aaagtATGAAGATTCACAAggtaaaataataatttctttaattaTGATTT
TCTTAGGCCCTATTTCGTGTCGATTGCATGCATATTGAATGCAATTATTG
AATGTTTTGTAGCTGTAATGCACGGTATTCAAAGTGGTATTCAAACTTGT
TTTATTTTAGCTTTAAAAGCTGCAGTTATAGGCATTCACTATGAAGCAAA
GGATCGTTGAAAGTAACATTTATTACTGTTagattttggaaaatataaAC
CTTAAACAGAGCAAGCATTGAATTAAATTCGTCTTTAGAAGGGTGGttga
aaacctttcttttttctTGCATAGAAAAGGTTGAAGGTTAGGTTCTAGCG
TCTGGGCTTTTTATTTTATGGGTCATTTAACTAATTATTTATTCTTTAGT
TCAATGGGTTGGGCCAACAGAACAACCATCATATACACACACCACAAAAA
CTCACCCATGATAAATCACCTACTACACCACAAAAAGATGTCGTTCAACC
TTTTGAAACAGGAGCTTCGGAGGGCGGACCTGTTAAAACAACTGAAACGC
CCCCGCCCACACCAATCGAAGAGACAGTGCTTGTTCACCATAAACCTAAA
AACGAGGTACCACACGATTTTTTCTAGTTTTCCATCAATGTTTTCCTATA
CTCAGGTGGCTGATTGGTGGCCAACTATACCAAAATTTCTAAAGTCAAAA
CCCGGTCAATTACCCAGTCGAGTTCAAGTGAGTTAGAATACTCTTATCTC
AATTATTAcatgtaattatattttataaggATGAAAATCAAAACCATCAA
GACGACGAAGACTCCAGTACAACGAATCTCGTAGCTATGACAACTAAAGA
CGAAGATACTTTTGATTCGTTGAAAAGGGGGCATGGGGCGAGTGTAACCA
GTAACGACAATATCAATGATACAGGTACGTAAGGATTATGTTTTTAGTTT
CAATATGCACACCAGTGCCGAAGGAAGCACTTTGATATTGGGGGAGGGGT
GGCTGAGATTTTGTTACATCATGTGAGCACACAGGTTTGGCCTGaagggg
aaattttgaaaaatttaaggTCAAGATGGCCGGaaaatgtaccttattgt
aaaAAAAGGCCAAGTTTTATAAATATTAAGTTAAGGTTTTctttcataaa
agaaatcacGAAACAATaataatgaaagaaaaacaacgtCACTGTTTTGT
AGGAAGTGACGCCGAATCAAAATCCGTCAAAAGTACCAACACTGATATTA
CCGATATCAGCGTCGACAAATCAAACAGCACCACACCTGTAAGGGTGGAA
AAAGGCGTTGAAGAAGAGAGTACAAAACCTACACAAGAACGCCCATCTCC
TGCGCTAAGCGCTGGAAGAGAGAACACTTTCCCAAGCCAAACCACGATCA
GCAGTAAACAAGAGACGCGACCAGCTTCTCGAATTTCTAATGTCTCTTTT
ACAAGTCAAATGGGGATGAATGAggtattattttttataagggTATCAAc
aaattttcctgattttggctcattattttcaaacttaaatttCCCATAAA
TACTAAGAAAAACACAGTACATTAGACCCGTGAACTGAtcaaaatgaaag
agccaaaatGGTTTCAGATTTATGGTTGGGcaacaaagaaaatttacatt
tttacaaCTTTTAAACATCCTACCTAAAACGCGATCTGATTAAAATGACC
CATACAGTACTTAACCTCCAGAGAGAAAATGGTGCAACTTTGAGCACCAA
GTTTAGAAAAATCAGCATTTTATGTAATCGCAACAAGTTTCATAAAGATG
CATTTCCAATTTTACAGCTTGAAAGTCTATTCAACAATCCTGACTTATTG
AGCCAATCAAATTGGAAAGCACGAAGTAAATCACATGCGTCGCCCAATAG
AATGGTAAGACTTTGTCACGTGATTTTCGAGAAGGAAAGTCGACAATCTG
ACTAGCTGCTAAGATACTTGTGTATTTAACATATCAATAGTTCTACTTGC
AACATATGAGATCAGTTTTAAACTTTTCGGGCATTTATGGTAGGTCTTAC
TTTGAAGCGCCGCGACCTAGGTGCTGCCCTGTTTTTTTTACCCCGTCCGA
ATGAAAAAGTCTAGAttgtcattattttttcttAGTTGGGGCGTGAACGC
gcactttaaataaaaaatatctgaACATTTGAAGTTACGTTGTGattaaa
tttaatttcgcgaggtTCGCTCTTAGGCTTAATCAGGACAATATGTTATC
TCTTTGATgcagaatacaccttttcgaccgtagccgccaattgtcgCCCG
GGCATTCTTTTCTgctttaccaccctaaaactgtcccagtcttttttttc
gcgccttaagagtatagaaaaaagtgtaaaaaaatggattggatcgagtt
tagggtggtaaattaaataataaagtggcacgcgcctgaccacgcgacta
cggtcgaaaatgtGCATTGAAGTAGTTGGATtaaacctttttctttatcc
aGGCGACAGAAACAGCAAGGCAGGAGGTGCAACAGAAAAAAGTCGAAACA
AAAACcattaatgaaaataaagaggACGATTCAACTGAAGAAAATAAAGC
TAAGAACAATGTAAGTTCAAAAATTGCGACGAAATGAGTAAATTCTAGTT
ATTCTGGTTATTGTAATAAGATTCTTATGGTTATTATGGTTATTGTGGTA
TGAAGGAAAAGCACATCTCTgtcaaaaattgaagaaattggGGAGAGGTA
TTggggaaaaatacccaaaagatcGTAGCAGTCATGTGTGAAATCTTTTT
AGCCAACATATACTCAACACCTTTCAATGTTAATACGATTTTAAACTAGT
GTGAGGCGGGAGTTCTATAACAAATCACAACCATGACCCTGtttttatag
actagtttttggcATTCCAAATCCAatgaattttcacaaaaatcaacCGT
ATAAAATTCTCGTACCTTGCTTTTGCTAGTATTTTTGGACAACTtaaaaa
aatgaacttcaaatcTACAGACACAGACACGTCAAACCCTTTATACTTCT
TATTCAAGTCGATTTCTAATTATTTTAATAGGACACACCGTCGACAAAGC
GAAGTAAAAAAGATAGTCGGAatgaatttttcgatttcaactGATGACAG
CCTGAAGATTCCAAAAGAAAACATGGCATCAATGCAGAATAACAGAAGGT
GAAAAAGTCCGAAGCCTCAATCGTGTGGTTTTTAGCATTGCTTCCACAAC
AATGGTGCCGCTATAAATTGGGATGCGTGGATAAAGTTCTGTAAATTCTG
AGAACCATCACCGAAAGATTGACCTAAATTGATAAAACGTTTTAAAGTCG
TGTCGAGAGTTTAACAACCTTCGAGACATTTACAACAACGTTTACATGAT
ATTGCCAGTGATACACAATTTAAAAATACGGGGACCTGAATAAATGGAAC
ATTACAAAGATggaaaaattaaagaaacatTTACCATAAAAACACTAAGA
ATCCCAGACACTCCTCCTGAACGATTCATTGAAAGGACAATCCCCCGACC
GTACGATTTCCCGAGTTGTCCGGTCGGGGAGTTTTCTGTCAGGGAATTAT
CCGTCGGAAAATGGTTGGTCAGGGAACCGTCAGCCGGTGAATCATCAGTT
CGGGAATTTTCCTGAACGGTAAACAATAAATCCAAAGCTGAGTTATGAAA
TATATCATGGACTTAAATAAAGTTTAAGTGGACTTAAATAAAGTTTAAGT
GCCCTGTACATCGTTGTCTGTGTGGACCAAcgaaatttttttatatgttg
TGGGTTGAGTACATGGATAAACGTAATGGTTTTTATGGGTAGTTGTTGcg
ttcaaaattaaattttgtctATCATTTTACTGTTTGTATTATTTATATTA
ATGAAACTGGTAAAAATTGATTCCATAATTTTTAG

Coding sequence (CDS) from alignment at sc0000019:774278..786062+

>TCONS_00002277 ID=TCONS_00002277|Name=TCONS_00002277|organism=Clytia hemisphaerica|type=CDS|length=1371bp|location=Sequence derived from alignment at sc0000019:774278..786062+ (Clytia hemisphaerica)
AGTTTGGCTTATTACAATTGTTGGAATTCGGATCATATCATTTGGCTAAT
GATCATTCCGTGTGTTTGCTTGGCTGCGATTTCCATGAAATTCATAATAT
CAAGCAATTTATATTGCAACAAGAAGAACAAGAATGATCTGCAGCTTGCT
TCTTTAAGATATTTTGCAAGGACAAATATTGTGATGTTGGTTTTACAGAC
CATGTTATGGGTTTGTCTTGTTCTCACATTTTGGTATCCAAAAGAAGAAA
CATTCCATTCCCTGTTTGGTGTCGTCACTTCGCTAAAGtctgCTATTACA
TTCTTCATGTATGCTATAACATACGTTGAGATGTACAGGCATAATGGTTA
CCATGACATCCAGACCGAATATTACGAAGACCAGAATGATGATGGTGCAA
TTAAAATGGATCCACTTGAACATGAAGTCAGCAATCAGAATCTAAAGGAT
GTAGAAACAGAGCAAACAGGAAGAATAGAAGCTGTAGAGTTCAATGGGTT
GGGCCAACAGAACAACCATCATATACACACACCACAAAAACTCACCCATG
ATAAATCACCTACTACACCACAAAAAGATGTCGTTCAACCTTTTGAAACA
GGAGCTTCGGAGGGCGGACCTGTTAAAACAACTGAAACGCCCCCGCCCAC
ACCAATCGAAGAGACAGTGCTTGTTCACCATAAACCTAAAAACGAGgATG
AAAATCAAAACCATCAAGACGACGAAGACTCCAGTACAACGAATCTCGTA
GCTATGACAACTAAAGACGAAGATACTTTTGATTCGTTGAAAAGGGGGCA
TGGGGCGAGTGTAACCAGTAACGACAATATCAATGATACAGGAAGTGACG
CCGAATCAAAATCCGTCAAAAGTACCAACACTGATATTACCGATATCAGC
GTCGACAAATCAAACAGCACCACACCTGTAAGGGTGGAAAAAGGCGTTGA
AGAAGAGAGTACAAAACCTACACAAGAACGCCCATCTCCTGCGCTAAGCG
CTGGAAGAGAGAACACTTTCCCAAGCCAAACCACGATCAGCAGTAAACAA
GAGACGCGACCAGCTTCTCGAATTTCTAATGTCTCTTTTACAAGTCAAAT
GGGGATGAATGAgCTTGAAAGTCTATTCAACAATCCTGACTTATTGAGCC
AATCAAATTGGAAAGCACGAAGTAAATCACATGCGTCGCCCAATAGAATG
GCGACAGAAACAGCAAGGCAGGAGGTGCAACAGAAAAAAGTCGAAACAAA
AACcattaatgaaaataaagaggACGATTCAACTGAAGAAAATAAAGCTA
AGAACAATGACACACCGTCGACAAAGCGAAGTAAAAAAGATAGTCGGAat
gaatttttcgatttcaactGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001206XLOC_001206Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002277-exon-sc0000019-1491911889:774278..774356TCONS_00002277-exon-sc0000019-1491911889:774278..774356Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1510915933:774278..774356TCONS_00002277-exon-sc0000019-1510915933:774278..774356Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1575043694:774278..774356TCONS_00002277-exon-sc0000019-1575043694:774278..774356Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1491911889:776420..776499TCONS_00002277-exon-sc0000019-1491911889:776420..776499Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1510915933:776420..776499TCONS_00002277-exon-sc0000019-1510915933:776420..776499Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1575043694:776420..776499TCONS_00002277-exon-sc0000019-1575043694:776420..776499Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1491911889:779799..779928TCONS_00002277-exon-sc0000019-1491911889:779799..779928Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1510915933:779799..779928TCONS_00002277-exon-sc0000019-1510915933:779799..779928Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1575043694:779799..779928TCONS_00002277-exon-sc0000019-1575043694:779799..779928Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1491911889:780476..780517TCONS_00002277-exon-sc0000019-1491911889:780476..780517Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1510915933:780476..780517TCONS_00002277-exon-sc0000019-1510915933:780476..780517Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1575043694:780476..780517TCONS_00002277-exon-sc0000019-1575043694:780476..780517Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1491911889:781028..781120TCONS_00002277-exon-sc0000019-1491911889:781028..781120Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1510915933:781028..781120TCONS_00002277-exon-sc0000019-1510915933:781028..781120Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1575043694:781028..781120TCONS_00002277-exon-sc0000019-1575043694:781028..781120Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1491911889:781330..781395TCONS_00002277-exon-sc0000019-1491911889:781330..781395Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1510915933:781330..781395TCONS_00002277-exon-sc0000019-1510915933:781330..781395Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1575043694:781330..781395TCONS_00002277-exon-sc0000019-1575043694:781330..781395Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1491911889:782527..782733TCONS_00002277-exon-sc0000019-1491911889:782527..782733Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1510915933:782527..782733TCONS_00002277-exon-sc0000019-1510915933:782527..782733Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1575043694:782527..782733TCONS_00002277-exon-sc0000019-1575043694:782527..782733Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1491911889:782907..783051TCONS_00002277-exon-sc0000019-1491911889:782907..783051Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1510915933:782907..783051TCONS_00002277-exon-sc0000019-1510915933:782907..783051Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1575043694:782907..783051TCONS_00002277-exon-sc0000019-1575043694:782907..783051Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1491911889:783330..783601TCONS_00002277-exon-sc0000019-1491911889:783330..783601Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1510915933:783330..783601TCONS_00002277-exon-sc0000019-1510915933:783330..783601Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1575043694:783330..783601TCONS_00002277-exon-sc0000019-1575043694:783330..783601Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1491911889:783945..784031TCONS_00002277-exon-sc0000019-1491911889:783945..784031Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1510915933:783945..784031TCONS_00002277-exon-sc0000019-1510915933:783945..784031Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1575043694:783945..784031TCONS_00002277-exon-sc0000019-1575043694:783945..784031Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1491911889:784630..784737TCONS_00002277-exon-sc0000019-1491911889:784630..784737Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1510915933:784630..784737TCONS_00002277-exon-sc0000019-1510915933:784630..784737Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1575043694:784630..784737TCONS_00002277-exon-sc0000019-1575043694:784630..784737Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1491911889:785209..786062TCONS_00002277-exon-sc0000019-1491911889:785209..786062Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1510915933:785209..786062TCONS_00002277-exon-sc0000019-1510915933:785209..786062Clytia hemisphaericaexon
TCONS_00002277-exon-sc0000019-1575043694:785209..786062TCONS_00002277-exon-sc0000019-1575043694:785209..786062Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002277-proteinTCONS_00002277-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000019supercontigsc0000019:774278..786062 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.036374	0	0.0206334	0.030233	0.352293	0.357536	7.17937	8.08185	3.31043	3.48006	2.0381	3.37816	2.47526	2.36476	0.565317	0.653083	2.02199	2.53858	5.53815	5.87863	2.96984	2.96081	1.25927	1.68575	3.30165	3.61952	0.288557	0.295639	0.527164	0.518539
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002277 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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