TCONS_00002451 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002451
Unique NameTCONS_00002451
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1983

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002451 ID=TCONS_00002451|Name=TCONS_00002451|organism=Clytia hemisphaerica|type=transcript|length=1983bp
TTTTTTTCCAgtctgaaaatgaagaaagataCACCCAGAAGACAAACCAG
AGCCTCTTCAAGGCTAAAAGAAAAACACGTAGAAACAATAGAAGaagaGA
GCTTTGTAGAAGACCAACAAAACACAACTTTggtaaagaaatcaaaatca
aagaaagattCAGTCGAAGATTTCCCAAAAGctATAGATAAAGTTGGAGG
TACCCAACAAGAAGCACAAATAGAGGCGTCACCTACGAAAAAGAGGAAGA
ccaaaaaagacaaagaaaaatcactTGAGATAACAGAGATTGATGAAACA
CAAGAAGATGCAGctATAGATAAAGTTGGAGGTACCCAACAAGAAGCACA
AATAGAGGCGTCACCTACGAAAAAGAGGAAGAccaaaaaagacaaagaaa
aatcactTGAGATAACAGAGATTGATGAAACACAAGAAGATGCAGctATA
GATAAAGTTGGAGGTACCCAACAAGAAGCACAAATAGAGGCGTCACCTAC
GAAAAAGAGGAAGAccaaaaaagacaaagaaaaatcactTGAGATAACAG
AGATTGATGAAACACAAGAAGATGCAGAAAAGGAAACACAGGATTCTCCA
ACAAAAAAGAGgaagaacaaaaaaaacaaagaaaatgtaacTGAGGCTGA
AGAAATGAATGATACAGGAAAGAATATCAATGAATCACCAGTGAAAAAGA
GCAGGAAAACcagaaaagcaaaagaaaaatcaCCGGAGTTTGTTCAAGAT
GATGATATTCAAGAAGATACATTAGaagaaaagTCACCAGTGAAAAAAGG
CAagaaaggaagaaaaacaaaagagaaatCACTTGAGTTTGTTGAAGATG
ACAAACCAGACGAACATACAGAGCCACAAATTACAGAAGAATCGTCAGTG
AAAAAGAGCCGGAACAAtaaaaacagtaaagaaaaaaaatcagatgCTGT
AACAAGTGAAGACATAGCAGAAGAAGAGCTACAAATAAAGGAATCCCctg
tgaagaagaagaaaaggaaatcACCTAGACAGGACAAAGAACAAATATCA
GAGATCACTGAGGATGATGCCAATGACAAAGAAatagAGGATGAACCAAT
AGAAACTAAAGTTGAATTGAATAATTCACCACCAACAGACTCTGAAGATG
AAGCTCCCGAGGGGATTTCTTTAAAAGACAGTCGTAAGAAAGCTATACAA
ATTCAACAAGACATCTCTGAtgctaaaaaattgaaaaaatcacatcaAAA
ACAAGTGGTCCAAGATCGCCAAAAGAAAAATCGTCAACAGCAAGAAAAGT
CTAAGAAGAAAAGCCATCAGTTACCGGATAAGATTTCAGAGGATGTTTTG
AAATTAGTACAGCAAGAGGCTGAAGAGGAGCAAAATTCAGATTCTGAAAT
GGATATAGATGAACTGTTAAACCAAATAGGTCAAGAGAAACCTGCATTTA
AAACACAacctaaaaatcagaaaattactTTTGAAGATGACGATGATCCT
GGTTTTGATGAACAATTTCTTGATGAAGAGAGTGAGGATGACTTAGAATC
AGGTTTACAAGCACCAATAACAGCACAGCATTTGTATTCCGTAGATAAGG
TCAAAGATATTGGTACTGATGCAAGAGAGTTTCTACAGCAACACTTTTTC
GGTAAAAGACTCAAACGAGAAAAGAGATTAAAATccaatttcaaacaaaa
agttGGGTCGAAAAAGTCTAAACAAATTGGTAAAAGGAAAAAGATTATAT
GATgtagttttttttgtaaatgtttttatagttttataacattgattatt
ttattttactaaCTTTATACATTTATAACCTAAATGTGCAATTGATTTTA
TAAGAGGCTAAATATATCACAAAAGTTTGCTCCGGGATCgtgtcaaaatt
aaaaagtatttAAAGTAAGatctgagaaaattttttccctATTGTATTAT
GGGAGAATTGGAAAAGTTTGTACATCTCTGGTG
Run BLAST on NCBI

protein sequence of TCONS_00002451-protein

>TCONS_00002451-protein ID=TCONS_00002451-protein|Name=TCONS_00002451-protein|organism=Clytia hemisphaerica|type=polypeptide|length=583bp
FFSSLKMKKDTPRRQTRASSRLKEKHVETIEEESFVEDQQNTTLVKKSKS
KKDSVEDFPKAIDKVGGTQQEAQIEASPTKKRKTKKDKEKSLEITEIDET
QEDAAIDKVGGTQQEAQIEASPTKKRKTKKDKEKSLEITEIDETQEDAAI
DKVGGTQQEAQIEASPTKKRKTKKDKEKSLEITEIDETQEDAEKETQDSP
TKKRKNKKNKENVTEAEEMNDTGKNINESPVKKSRKTRKAKEKSPEFVQD
DDIQEDTLEEKSPVKKGKKGRKTKEKSLEFVEDDKPDEHTEPQITEESSV
KKSRNNKNSKEKKSDAVTSEDIAEEELQIKESPVKKKKRKSPRQDKEQIS
EITEDDANDKEIEDEPIETKVELNNSPPTDSEDEAPEGISLKDSRKKAIQ
IQQDISDAKKLKKSHQKQVVQDRQKKNRQQQEKSKKKSHQLPDKISEDVL
KLVQQEAEEEQNSDSEMDIDELLNQIGQEKPAFKTQPKNQKITFEDDDDP
GFDEQFLDEESEDDLESGLQAPITAQHLYSVDKVKDIGTDAREFLQQHFF
GKRLKREKRLKSNFKQKVGSKKSKQIGKRKKII
Run BLAST on NCBI

transcript from alignment at sc0000020:481875..492283+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002451 ID=TCONS_00002451|Name=TCONS_00002451|organism=Clytia hemisphaerica|type=transcript|length=10409bp|location=Sequence derived from alignment at sc0000020:481875..492283+ (Clytia hemisphaerica)
TTTTTTTCCAgtctgaaaatgaagaaagataCACCCAGAAGACAAACCAG
AGCCTCTTCAAGGCTAAAAGAAAAACACGTAGAAACAATAGAAGGTGAGC
CATTGAAAtagatttctttgattttttctccaaaacaCTATATATCTGAA
CTAATGTTACAAATGCTAATTGGCATACCTTATCCGGGAAAAATGTTAGG
GaaagtgtcaaaatttttcatGGGTGTCAGTATTTTACTTGTCTAAAAAC
CTGAGGTTCCAtcatttgaaaaagccttgcTCGGATTATTTATCACTGGT
CCCTGGATCACTTTTACCTGATTTCTTATTATTGTCAATTTCTGGTTTCT
CTTgggtaaaaaaatcatttttgatccCTTGCATTAAtgcatttaaaaat
gattttaaaatgatatttttttgtgatactttttcttttttagaagaGAG
CTTTGTAGAAGACCAACAAAACACAACTTTggtaaagaaatcaaaatcaa
agaaagattCAGTCGAAGATTTCCCAAAAGGTAATAAAATAATCGATTGG
TTTCAAAACTCTTTTTATGGTTTTTTAGAATTATTAAATCAGcaaaatca
gtttttaactCTCACCAATATTTGAGAGATATGACTTCATTTGGAGCTTT
AAAAAAGAGTTTTTCAAAGTagctcatttttttctttccataaATATGTT
TGAatgtagcctggagatccatgctatgattacTTCTTTTATATAAAGAT
GGAGAAATGAATTGCATGGTTTNATCCATGCTATGATTACTTCTTTTATA
TAAAGATGGAGAAATGAATTGCATGGTTTGGGCTATGAGTTTGAATTTTC
CAGCTCCAAAAGGACCAGTTGAAAACACAGCTAATCAAATCTTGTTACTA
TTTACTATTCTTTTAAGTTGCtttaattttagtaagtgaggaaaGCGCTA
AATTCCAAGATTTCTTAGATTCGTCCTCACAGCCTGAACCCATCATGTAT
ACATAAATACAGGACAGGTCTCCTGTGTCTAGTTTGAATAATACTTCTAA
ATAAAACAGCACTGAATGTTCTATGTCAAAATTAACTTGCTTACATTTTC
TGACCGTTCAGATGAAAttctgtagaaaaaaaactttcattttagTTAAT
AGAATGAAAGAGAAATCCTTTGATTTCACTATGTGAATCAACACTTGTAC
TCATTTTTAATCATTCAGCCAATGTGTTATCTGAATTGTTTtcgtagaaa
aaatctttatctcGTCAGATCTCGTTGTGTatcaaaattaccaaaataaa
ttgaaaaatatcttatcGTAGCCCATTATTGCTCTGTGTACTGTATGATT
AAATGAAatatatgatctcttttaagctATAGATAAAGTTGGAGGTACCC
AACAAGAAGCACAAATAGAGGCGTCACCTACGAAAAAGAGGAAGAccaaa
aaagacaaagaaaaatcactTGAGATAACAGAGATTGATGAAACACAAGA
AGATGCAGGTAATTTTGATTATTGTTCTTCATCAGATCTATTGTCTCTTT
TTTATTATGCCCCTTTAAAGTGTGAAAAGACTGGGTTAGTTTACAATGCA
GGATTGAAATCAAATGTTTGAAGTTGTTGCATTTATTTTCGCATTAAAAC
ATAATTTTGACATGGTTCCTTgccaataaaaatttgaatgaaagaaAAAT
CCATTGATTTCACTATGTGAATCAACACTTCCACTAATTTTTAATCAATC
AGCCAATGTGTTATCTGaattgttttcttaaaaaaatctttatctcGTTG
TGTATTATAATGaccaaaataaattgaaaaatatcttatcGTAGCCCATT
ATTGCTCTGTGTATCGTAAGATTAAATGAAatatatgatctcttttaagc
tATAGATAAAGTTGGAGGTACCCAACAAGAAGCACAAATAGAGGCGTCAC
CTACGAAAAAGAGGAAGAccaaaaaagacaaagaaaaatcactTGAGATA
ACAGAGATTGATGAAACACAAGAAGATGCAGGTAATTTTGATTATTGTTC
TTCATCAGATCTATTGTCTCTTTTTTATTATGCCCCTTTAAAGTGTGAAA
AGACTGGGTTAGTTTACAATGCAGGATTGAAATCAAATGTTTGAAGTTGT
TGCATTTATTTTCGCATTAAAACATAATTTTGACATGGTTCCTTgccaat
aaaaatttgaatgaaagaaAAATCCATTGATTTCACTATGTGAATCAACA
CTTCCACTAATTTTTAATCAATCAGCCAATGTGTTATCTGaattgttttc
ttaaaaaaatctttatctcGTTGTGTATTATAATGaccaaaataaattga
aaaatatcttatcGTAGCCCATTATTGCTCTGTGTATCGTAAGATTAAAT
GAAatatatgatctcttttaagctATAGATAAAGTTGGAGGTACCCAACA
AGAAGCACAAATAGAGGCGTCACCTACGAAAAAGAGGAAGAccaaaaaag
acaaagaaaaatcactTGAGATAACAGAGATTGATGAAACACAAGAAGAT
GCAGGTAATTTTGATTATTGTTCTTCATCAGATCTATTGTCTCTTTTTTA
TTATGCCCCTTTAAAGTGTGAAAAGACTGGGTTAGTTTACAATGCAGGAT
TGAAATCAAATGTTTGAAGTTGTTGCATTTATTTTCGCATTAAAACATAA
TTTTGACATGGTTCCTTgccaataaaaatttgaatgaaagaaAAATCCAT
TGATTTCACTATGTGAATCAACACTTCCACTAATTTTTAATCAATCAGCC
AATGTGTTATCTGaattgttttcttaaaaaaatctttatctcGTTGTGTA
TTATAATGaccaaaataaattgaaaaatatcttatcGTAGCCCATTATTG
CTCTGTGTATCGTAAGATTAAATGAAatatatgatctcttttaagctATA
GATAAAGTTGGAGGTACCCAACAAGAAGCACAAATAGAGGCGTCACCTAC
GAAAAAGAGGAAGAccaaaaaagacaaagaaaaatcactTGAGATAACAG
AGATTGATGAAACACAAGAAGATGCAGGTAATTTTGATTATTGTTCTTCA
TCAGATCTATTGTCTCTTTTTTATTATGCCCCTTTAAAGTGTGAAAAGAC
TGGGATAGTTTACAATGTAGGATTGATATCAAATGTTTAAAGGTGTTGCA
TTTATTTTCGCATTGAAACATAATTGTTCCTTTCTAATAAAAACGCGACC
AAATTCCTTCTTATTTTTCATTGTAATGAGTTATTTAGTCAGAacaatga
caacaaagtttCTCAATACCCTGATAAAATTGTCATTGTTGCCTGATAAT
AATATTGTTCATTTAGAAAAGGAAACACAGGATTCTCCAACAAAAAAGAG
gaagaacaaaaaaaacaaagaaaatgtaacTGAGGCTGAAGAAATGAATG
ATACAGGTAGAAAACTAGATTTGTCCATTGTTTTTTGCTTTTGTTGCGCA
AGGTCAACAGACCCAAAGCCTTTTCAAATTCAGAGCAACTAAAATCACTC
CCTAGTCAAGGTACCCTTAAATAAactaagtttttttcaaaacctgaaTA
AAGGAGAACAAAGCTGGCAAAAAAGGTTAGGTGCTTAGCCTGTATAAAGA
TAAAAGAATAAAGTGAATTTTTAAATGCCATTTTGTCACTTCGAATTTTC
GAATATTATTTAATTTCAACTAAGGAAAGGTTgttattctcattttttta
aACAGGATAGCACTGGACTTGGCAGCCCTAGGTCCTAACTTACCAGTACA
GAACTGTAACAAAATCTCGCGTGGTACCACTTTAGACTCTATTTCTTTTA
ACCAGGAAAGAATATCAATGAATCACCAGTGAAAAAGAGCAGGAAAACca
gaaaagcaaaagaaaaatcaCCGGAGTTTGTTCAAGATGATGATATTCAA
GAAGATACATTAGGTATGGGgctgtccacatagtacgtacgcactaaagg
gggaggggggtcttctcaaaagtgTATGAAAAGCGAGTTAAAGAAAAATG
TATGTACGCattgtaaagaaaaatttttgtttttttgtcgacttttacac
TTCTTATCTgttcttatacgcatcaaggaatagaaaaagtttcttaataa
acaacaagtttcatgtatgaaatgaAGATCcaaaccaaacgatttgaatt
taaaattttcttcaaccgaggggggcGGGGGGGGAGTTATGAAAAAGTAC
GTTTTTTACcaggggtatagccatttgcgtacaaGGGGTACCCCCtgtac
tcgattttcgacattttagtgcgtacatACAATGTGGAAGGCCCCTATGC
AATATTTAATAAGATCCTTATCCAAAGAATCTGACTGTAACTATTTTCTG
TTGTATGGCTGGCAACGGATCAAGTTAACACCTGCCAAGTAAAATTCAAA
ACTGCGTAAGGCCTACCCTCTTcgtttgtctgttaccagcttttttttgg
tattggttctttgttagtttttttgtacaaagatatggaaaaatTGGTAA
TAACTGAgctccattttcaaaaaaaagttttttgcttgccaaaaaatgtc
aaaatatgcGGAAGTTcgttattttagattttcaaagatttttttttNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNACTTTTACACTTCTTATCTgttcttatacgcatcaaggaatagaa
aaagtttcttaataaacaacaagtttcatgtatgaaatgaAGATCcaaac
caaacgatttgaatttaaaattttcttcaaccgaggggggggggggggga
gttaTGAAAAAGTACGTTTTTTACcaggggtatagccatttgcgtacaaG
GGGTACCCCCtgtactcgattttcgacattttagtgcgtacatACAATGT
GGAAGGCCCCTATGCAATATTTAATAAGATCCTTATCCAAAGAATCTGAC
TGTAACTATTTTCTGTTGTATGGCTGGCAACGGATCAAGTTAACACCTGC
CAAGTAAAATTCAAAACTGCGTAAGGCCTACCCTCTGcgtttgtctgtta
ccagcttttttttggtattggttctttgttagtttttttgcacaaagata
tggaaaaatTGGTAATAACTGAgctccattttcaaaaaaaagttttttgc
ttgccaaaaaatgtcaaaatatgcGGAAGTTcgttattttagattttcaa
agatttttttttaatcaattctACCATCCTAGAAATTGGAGGGAGCAGCC
AATTGTCGCCACTATAATGATTTTTCTTGATATTCTCTGTACTCATTGAA
TTTACCGATTTTTTCTTCCTTAATCTTCATTTAGCATGgtttaattttca
taaaaaaattattttcaatcacTTGATGtacagccagtaaaatttatTTG
AGCCTTCTTTCTCCTTTTTCTCTTCGTCTTTTTGACATCAGGTcttcatc
aggtaggtccaatcaaCATCCAtccattattattattttcagaagaaaag
TCACCAGTGAAAAAAGGCAagaaaggaagaaaaacaaaagagaaatCACT
TGAGTTTGTTGAAGATGACAAACCAGACGAACATACAGGTATAAGCATGA
CATATTGTGCACTGAAAAAGCAGCAATTATAATAGCATGCCATATTTCGG
AAAGGATTAAATTAGGACTGTCATTTTttcttctgttattttattCTGTT
GTCAactcagcgttttgattggtcgagagcatcgagatatttgtgatatt
taaaatatttcacatGTGGAAAATATGACTACGTTGACTTTCGGGGGCTG
CGTGAGCGgtgggagaaaaatcaaaacaaaacagccgaaaagaactgact
aaagaaaaaataaagatcagCAAAAAGATTATTTGCAGATTAATTTTTTA
CTTTGGATTTCTTCCATTAGAGACactaaaatgggggggggggtttgtag
gggttcgaaataccgttttcccgtcaaaatttttgctgaatcccggaatc
ccgaaaattgaaaaaataataacaccgtcacaccagCTTGTACAGGGaaa
aaatgtacctaaataccgtcagcttctgattttaaaataccgttttcccg
tctcttttttcgtcaaatcccgtataataccgtactaaaaaagggccaat
cccgtcacaccgtaaaagtacaaacccccctctaaaatcaaatctaatga
aatgtaaaagtaaaaaattaaataaaagtagaatttcatctaaaaaatct
cctaaaaagacagcaaaaatttagatttttgaaatttcagggtcggtcgg
gcccatAAAACAAACTAATTAAATTGGTCTTGCCTAATAATACTTTCATT
TAATATTATTTAAGAGCCACAAATTACAGAAGAATCGTCAGTGAAAAAGA
GCCGGAACAAtaaaaacagtaaagaaaaaaaatcagatgCTGTAACAAGT
GAAGACATAGCAGGTAAAGCACTGTTCTTTGTAATACTTCTTTATAATGG
CTTTGTTGTCAGTCAACATAGATTCGACATGGAAGTGTGAGGGTATGCAG
TCTAATATCAAAGAAACGAAAATGGAACATAATCTACATACAAAAGATTT
TCTACTAAACTATAGGTTATCTGTTACGCTCCTCTTGACATACCAAAAAT
TATGTTCACAATTTAACTCTTTTTAGAAGAAGAGCTACAAATAAAGGAAT
CCCctgtgaagaagaagaaaaggaaatcACCTAGACAGGACAAAGAACAA
ATATCAGAGATCACTGAGGATGATGCCAATGACAAAGAAataggttttgt
ttttttatatttataaaaggGTTTAGGTTTAATTTCACTATCGGAATCAG
AAGACGACCTATGATGGTCTCATCTTCTTAAATTCCTCCTTAAGATAGAG
GGGACTTGAACGATGTTGATTAGAATTACCCTATAAGAATAGATGTCAAA
GATGGGTTAAAGGGaaattaaagtagtaaaatgtaaacattgcgcgaacc
acgtgtcattaaagagaacaattgagatcacgtgtccaaaacaaacttgt
aagacaattgaacaatcaaaataattagccatatttggtttgattttgta
tccgctgcatacagtttgtttacaaatttcgcaagtactgttatgtccct
ttaatatgGTGAAGGTTTTGCCAGTGATATGGTGTCTTTTTTCAATCTCC
GATTGGGTCATTAAATCATCaagtttcgatatttttataagaaaggttAT
TCACTCGCAAGGGGACGGGTGTAGTTTAAAATTTATTGTACAAAAAAGTT
AATCCTACCATGGTCTTTTTTGATTCGATCGATATTGATCAAAACGAACC
AGGGAGaaagagtaaaaaaaactttcaaaaaacctAAAGAAACATCGCCT
GGAATTTATGAAGCTGAACAATCAAATGCTATtgaatttgattgattgat
atgaATATTAATTTTTAGCTTCAGTTGAACTATATAAGGGAACAAAATTA
TGCGGAATGAAAATTTGGTGGAAATAccaccaaaattaaattcccgccaa
atttaaaatatttttttcccgaATGAGTATTATTtcagtctttaaaaaaa
acgttctttctcatttaaaaaaaaagcgcCAAAAATATCCTTCATCTGCC
AAAGGAAATTCCCAACGAAAATAATGTTTTCGGCCATccaacaaattaaa
ttcctgctcAAATTTCTTCCTTGAGTTAGAATCTAAAAGTGACAGTTTCT
AATGACTAATATGGTTTGCCATTACATTATTCTTTAACTCTTTCAGAGGA
TGAACCAATAGAAACTAAAGTTGAATTGAATAATTCACCACCAACAGACT
CTGAAGATGAAGCTCCCGAGGGGATTTCTTTAAAAGACAGTCGTAAGAAA
GCTATACAAATTCAACAAGACATCTCTGAtgctaaaaaattgaaaaaatc
acatcaAAAACAAGTGGTCCAAGATCGCCAAAAGAAAAATCGTCAACAGC
AAGAAAAGTCTAAGAAGAAAAGCCATCAGTTACCGGATAAGATTTCAGAG
GATGTTTTGAAATTAGTACAGCAAGAGGCTGAAGAGGAGCAAAATTCAGA
TTCTGAAATGGATATAGATGAACTGTTAAACCAAATAGGTCAAGAGAAAC
CTGCATTTAAAACACAacctaaaaatcagaaaattactTTTGAAGATGAC
GATGATCCTGGTTTTGATGAACAATTTCTTGATGAAGAGAGTGAGGATGA
CTTAGAATCAGGTTTACAAGCACCAATAACAGCACAGCATTTGTATTCCG
TAGATAAGGTCAAAGGCNGACTTAGAATCAGGTTTACAAGCACCAATAAC
AGCACAGCATTTGTATTCCGTCAGGGTCAAAGATATTGGTACTGATGCAA
GAGAGTTTCTACAGCAACACTTTTTCGGTAAAAGACTCAAACGAGAAAAG
AGATTAAAATccaatttcaaacaaaaagttGGGTCGAAAAAGTCTAAACA
AATTGGTAAAAGGAAAAAGATTATATGATgtagttttttttgtaaatgtt
tttatagttttataacattgattattttattttactaaCTTTATACATTT
ATAACCTAAATGTGCAATTGATTTTATAAGAGGCTAAATATATCACAAAA
GTTTGCTCCGGGATCgtgtcaaaattaaaaagtatttAAAGTAAGatctg
agaaaattttttccctATTGTATTATGGGAGAATTGGAAAAGTTTGTACA
TCTCTGGTG

Coding sequence (CDS) from alignment at sc0000020:481875..492283+

>TCONS_00002451 ID=TCONS_00002451|Name=TCONS_00002451|organism=Clytia hemisphaerica|type=CDS|length=1752bp|location=Sequence derived from alignment at sc0000020:481875..492283+ (Clytia hemisphaerica)
TTTTTTTCCAgtctgaaaatgaagaaagataCACCCAGAAGACAAACCAG
AGCCTCTTCAAGGCTAAAAGAAAAACACGTAGAAACAATAGAAGaagaGA
GCTTTGTAGAAGACCAACAAAACACAACTTTggtaaagaaatcaaaatca
aagaaagattCAGTCGAAGATTTCCCAAAAGctATAGATAAAGTTGGAGG
TACCCAACAAGAAGCACAAATAGAGGCGTCACCTACGAAAAAGAGGAAGA
ccaaaaaagacaaagaaaaatcactTGAGATAACAGAGATTGATGAAACA
CAAGAAGATGCAGctATAGATAAAGTTGGAGGTACCCAACAAGAAGCACA
AATAGAGGCGTCACCTACGAAAAAGAGGAAGAccaaaaaagacaaagaaa
aatcactTGAGATAACAGAGATTGATGAAACACAAGAAGATGCAGctATA
GATAAAGTTGGAGGTACCCAACAAGAAGCACAAATAGAGGCGTCACCTAC
GAAAAAGAGGAAGAccaaaaaagacaaagaaaaatcactTGAGATAACAG
AGATTGATGAAACACAAGAAGATGCAGAAAAGGAAACACAGGATTCTCCA
ACAAAAAAGAGgaagaacaaaaaaaacaaagaaaatgtaacTGAGGCTGA
AGAAATGAATGATACAGGAAAGAATATCAATGAATCACCAGTGAAAAAGA
GCAGGAAAACcagaaaagcaaaagaaaaatcaCCGGAGTTTGTTCAAGAT
GATGATATTCAAGAAGATACATTAGaagaaaagTCACCAGTGAAAAAAGG
CAagaaaggaagaaaaacaaaagagaaatCACTTGAGTTTGTTGAAGATG
ACAAACCAGACGAACATACAGAGCCACAAATTACAGAAGAATCGTCAGTG
AAAAAGAGCCGGAACAAtaaaaacagtaaagaaaaaaaatcagatgCTGT
AACAAGTGAAGACATAGCAGAAGAAGAGCTACAAATAAAGGAATCCCctg
tgaagaagaagaaaaggaaatcACCTAGACAGGACAAAGAACAAATATCA
GAGATCACTGAGGATGATGCCAATGACAAAGAAatagAGGATGAACCAAT
AGAAACTAAAGTTGAATTGAATAATTCACCACCAACAGACTCTGAAGATG
AAGCTCCCGAGGGGATTTCTTTAAAAGACAGTCGTAAGAAAGCTATACAA
ATTCAACAAGACATCTCTGAtgctaaaaaattgaaaaaatcacatcaAAA
ACAAGTGGTCCAAGATCGCCAAAAGAAAAATCGTCAACAGCAAGAAAAGT
CTAAGAAGAAAAGCCATCAGTTACCGGATAAGATTTCAGAGGATGTTTTG
AAATTAGTACAGCAAGAGGCTGAAGAGGAGCAAAATTCAGATTCTGAAAT
GGATATAGATGAACTGTTAAACCAAATAGGTCAAGAGAAACCTGCATTTA
AAACACAacctaaaaatcagaaaattactTTTGAAGATGACGATGATCCT
GGTTTTGATGAACAATTTCTTGATGAAGAGAGTGAGGATGACTTAGAATC
AGGTTTACAAGCACCAATAACAGCACAGCATTTGTATTCCGTAGATAAGG
TCAAAGATATTGGTACTGATGCAAGAGAGTTTCTACAGCAACACTTTTTC
GGTAAAAGACTCAAACGAGAAAAGAGATTAAAATccaatttcaaacaaaa
agttGGGTCGAAAAAGTCTAAACAAATTGGTAAAAGGAAAAAGATTATAT
GA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001309XLOC_001309Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002451-exon-sc0000020-1491911889:481875..481968TCONS_00002451-exon-sc0000020-1491911889:481875..481968Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1510915933:481875..481968TCONS_00002451-exon-sc0000020-1510915933:481875..481968Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1575043694:481875..481968TCONS_00002451-exon-sc0000020-1575043694:481875..481968Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1491911889:482318..482404TCONS_00002451-exon-sc0000020-1491911889:482318..482404Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1510915933:482318..482404TCONS_00002451-exon-sc0000020-1510915933:482318..482404Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1575043694:482318..482404TCONS_00002451-exon-sc0000020-1575043694:482318..482404Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1491911889:483251..483382TCONS_00002451-exon-sc0000020-1491911889:483251..483382Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1510915933:483251..483382TCONS_00002451-exon-sc0000020-1510915933:483251..483382Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1575043694:483251..483382TCONS_00002451-exon-sc0000020-1575043694:483251..483382Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1491911889:483774..483905TCONS_00002451-exon-sc0000020-1491911889:483774..483905Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1510915933:483774..483905TCONS_00002451-exon-sc0000020-1510915933:483774..483905Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1575043694:483774..483905TCONS_00002451-exon-sc0000020-1575043694:483774..483905Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1491911889:484297..484428TCONS_00002451-exon-sc0000020-1491911889:484297..484428Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1510915933:484297..484428TCONS_00002451-exon-sc0000020-1510915933:484297..484428Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1575043694:484297..484428TCONS_00002451-exon-sc0000020-1575043694:484297..484428Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1491911889:485241..485330TCONS_00002451-exon-sc0000020-1491911889:485241..485330Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1510915933:485241..485330TCONS_00002451-exon-sc0000020-1510915933:485241..485330Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1575043694:485241..485330TCONS_00002451-exon-sc0000020-1575043694:485241..485330Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1491911889:485730..485837TCONS_00002451-exon-sc0000020-1491911889:485730..485837Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1510915933:485730..485837TCONS_00002451-exon-sc0000020-1510915933:485730..485837Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1575043694:485730..485837TCONS_00002451-exon-sc0000020-1575043694:485730..485837Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1491911889:489017..489112TCONS_00002451-exon-sc0000020-1491911889:489017..489112Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1510915933:489017..489112TCONS_00002451-exon-sc0000020-1510915933:489017..489112Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1575043694:489017..489112TCONS_00002451-exon-sc0000020-1575043694:489017..489112Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1491911889:489889..489987TCONS_00002451-exon-sc0000020-1491911889:489889..489987Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1510915933:489889..489987TCONS_00002451-exon-sc0000020-1510915933:489889..489987Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1575043694:489889..489987TCONS_00002451-exon-sc0000020-1575043694:489889..489987Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1491911889:490201..490317TCONS_00002451-exon-sc0000020-1491911889:490201..490317Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1510915933:490201..490317TCONS_00002451-exon-sc0000020-1510915933:490201..490317Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1575043694:490201..490317TCONS_00002451-exon-sc0000020-1575043694:490201..490317Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1491911889:491321..491839TCONS_00002451-exon-sc0000020-1491911889:491321..491839Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1510915933:491321..491839TCONS_00002451-exon-sc0000020-1510915933:491321..491839Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1575043694:491321..491839TCONS_00002451-exon-sc0000020-1575043694:491321..491839Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1491911889:491907..492283TCONS_00002451-exon-sc0000020-1491911889:491907..492283Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1510915933:491907..492283TCONS_00002451-exon-sc0000020-1510915933:491907..492283Clytia hemisphaericaexon
TCONS_00002451-exon-sc0000020-1575043694:491907..492283TCONS_00002451-exon-sc0000020-1575043694:491907..492283Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002451-proteinTCONS_00002451-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000020supercontigsc0000020:481875..492283 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	6.13862e-10	1.55182e-09	1.06896e-07	0	0	0.00391698	8.75143e-10	0	0	0	0	0	0	0	0.152758	0	0	0	0	0	0	3.51926e-08	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002451 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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