TCONS_00002496 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002496
Unique NameTCONS_00002496
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3184

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002496 ID=TCONS_00002496|Name=TCONS_00002496|organism=Clytia hemisphaerica|type=transcript|length=3184bp
TAAAAACGTGGTGAAAAGATTATACTCGAGTATGGAGGAACGTATTCACG
AACAATTTTTAGANGAAacaattttgatataaaaacGTGGTGAAAAGATT
ATACTCGAGTATGGAGGAACGTATTCACGAACAGATTTTAGAATTGAAGG
CTCGTTTAATCGACACAAGCCAGTTCATTGCACAGAACTCAATCTACCAA
CAAATAAAGAAACAGAGTGCTAAGAGTTTGAAATCACAAATCTCTCAATT
CAATTTAGGTAatggcaaaaagtttcaagatcCAATCAAAGCATCTGAGT
ACTTGCTGCAAAGAGAATATGGACAAACGTTTTTGTTCGATGAGAAACTC
AACCAACCTGTCTTCATCCCACCTGTTTTTACATCATCGCAATCTGCTGA
CAAAGCAGTTTTAGATTTCAATGTGGATAGCTCTATACAAGAGACACTTG
TCAATTTAAAACGTGACCAACCTGATTTCTGGTTCACTAAGGATCTTGAA
GCTTTCATTCAACTTCATCAGGACTCTGAAGGTCGGTTTAAGAAACTAGA
TGAAATATTTCATCCATGGATTTTAAACATGAAATTAAAATATCTTGCTA
TTCACGAGTTGAAAACTGACGGAAATGAACTGCATCTTCCTTTGGCAATC
GAAGATAAAGCTACCCTATTGAAAGATTTAATCGTTGCATTACCAAAAGA
TTCTGAGCTGCGATTGGATTTATCATCCATCGTCAATAAAAACACTGGAA
GGATTGTTGAAAATCATTTGAAAAATAAGCAGCCGACTGATTCCAATTTG
AAGTGGTTCTTCAATCTAGATCTTGGTGATAGAGGAAATCGAATCGAAAA
TTGGTTTTTCGACCAATTATTGGACGCTGATGATGAATTAGTGAGTGATC
TAGTTATTTTACAATCTGTCAATTTCTTCACCAATTTGAAGAACAAGATG
CACCAAGAGTATGACTTTCTTATCTTCTCGTGGTCTCGTAAACTCATCAT
AGGTGtggaaatgaaaagaaaaatctccATGAAAGCATTTGAACAATTAG
AAAGATATCACACGCTCTTTGAAGAACGATTGAGTGACCAATTGGAGTCA
GGATGGATCTTCTTCCCTGCTGTTTGCGTGGAGAATTCATCCACTCATTT
GATTGGTGTATCACCTCATTTCATTACAATAGAAACAAACATCGTGCAAT
GGCTTGGTCAAATATTGGCTCGCTTTCCTACGTGTCGGTATCAGTTACCC
CTCATTCACCCCCTGGATCAATTGAAGAAGATATTGCAAATCATCGTTTT
TACCGTCCATGTGTCCAAAAAACACCAACCACAACCTATCACCCAATCTA
ACTGGGTGCAATACATCGACCAAACCATCCAAACACTCTCCAACAAAGAC
AACATTGTCTTTTATTCAGCCAATCAATTACCCGTTTTCGTCGGCGGCAA
TTCTCGTTATAATAAACTCGTCATAACCGGTGGTTTTGGGAGTggcaaaa
gttttttgatgcaAGAGAAGGCGTTGGTGCTTAGCCAGCTGCCTGAATGT
AAAGGACGTATAATGTACGTGTGCAGATTCAAGCATTCAGAAAATGGTAG
TTTGTTTTATCATTCTTTGAAGCAGCAATTGGAACCACATGGAATTCTTG
TTAAAACGACTATTAATAGCgattGTCAAGGTGACTTGTTAAAGTCGATC
AAGTCTNAAGAGATAAATGTTCTATTTCTCGATGAATGGGCAATCGACGA
AGAATTTATCAGCAGTCTTCCTTCATCAGTTACCACTGTATGGATAGCAC
CGAACGTAGCAAGTCAATTCAACAATTTTCAAGAACGACTCCAAAAAGAA
GGATTTCAGCTCCTTAAACTATGCCTCAATCTTAGAAACAGTAAGGAGAT
TGTCAAAGCATCGAAAGAGCTAGCTGAGGAAACGCATTATCGATATCCGG
AGGGTCTCAAAATGCCGCCTGAGAATTTCCCACGTGGTCAAACACCTGTA
GTTGTCAAGGATGTTGAAGTTGCGTTGGCGCTAGCTCTAGATACGAACCA
TGATGGCGGAATTCTTGTGGCTGTTGGTGATGGAAGCTTCGAGGATGACA
TCGAGACAATATCTTCGTACACTGTGTGTGGTCAAGTCATGCGTTACCAG
AGAGGCAACATAACCTTCCATGAAAATTGTGATCCGtatcgatttttgaa
aacaagaggCGCCATTTTGGTTACAGATCATTTCTTTATCACCGGTTTTG
AATATCCAACCATTATCTATATCAAAAAAGATGCAGTACCTATTCAAATT
TTTGTCGAAGAGCACGAGTGTAACCTTTATCTACGCTGCACAACGCAATT
GATCATTGTCGACAAATGCAAACAAGAAGCGTCAACTGAGATGCAGCAAT
TGTCGAAGATTTTTAATAAATATGTTGGTACATTCGACTGGTGTCCGTTA
GCGTCTGTTCAAAAGGTTGTAGACGTGCCTAAAGAATTAGTTGAAGAACG
GGAGATATACAAGCATGCAATTGAGGAAAACTGGGGCAATAACAACACTG
AGGTAGGTGTCATGTCGAGTATCAGAAATGAACACCCTCATGGCCTTTTT
GGTTTCATGCTTCGTTGTTTCAAGCTTCTTTTACCAGCGCTTGAAGACAA
CGAGGATGAAAATGCAAGAATCATAAAGAAATGCTATGCACCTGGTGGGT
TAGAAGAGCTTTATTATCGTTGTTTTAACAATTATGCGACAGATCCGACA
GTATGTACGATTTTTATGGAAAGAATCGTTGAATTGTTGGAACTGGTCAT
AGCCGTTTGTAAATATGTTGGTGAAATTGATGATtaataaaatcttcaaa
aatacgaaaaaggAGGAACTTCATTGACTGGCTAATTTTTACGCTGTACC
TTATTGTACCcatttgttaatatttttcaattttaaaaatagtTGTATTT
CCATTTGTTGTGCGCGCTTTTGTGATAATTGCGCCAATTCGTAATATGTA
CCtgcgcaaatttgtaaaaattgtttCGCTATTTTATAATGCCTACGTGC
AAATTTGTGATAACCGTTGCGCTTTCGACTGcgctttttttgtaatttcc
gactgcgcagaaatgtaatactacTTCCctgatttggattttttttaaac
atagaAGGAGCATATTTTATCCTactaagaaaat
Run BLAST on NCBI

protein sequence of TCONS_00002496-protein

>TCONS_00002496-protein ID=TCONS_00002496-protein|Name=TCONS_00002496-protein|organism=Clytia hemisphaerica|type=polypeptide|length=908bp
MEERIHEQILELKARLIDTSQFIAQNSIYQQIKKQSAKSLKSQISQFNLG
NGKKFQDPIKASEYLLQREYGQTFLFDEKLNQPVFIPPVFTSSQSADKAV
LDFNVDSSIQETLVNLKRDQPDFWFTKDLEAFIQLHQDSEGRFKKLDEIF
HPWILNMKLKYLAIHELKTDGNELHLPLAIEDKATLLKDLIVALPKDSEL
RLDLSSIVNKNTGRIVENHLKNKQPTDSNLKWFFNLDLGDRGNRIENWFF
DQLLDADDELVSDLVILQSVNFFTNLKNKMHQEYDFLIFSWSRKLIIGVE
MKRKISMKAFEQLERYHTLFEERLSDQLESGWIFFPAVCVENSSTHLIGV
SPHFITIETNIVQWLGQILARFPTCRYQLPLIHPLDQLKKILQIIVFTVH
VSKKHQPQPITQSNWVQYIDQTIQTLSNKDNIVFYSANQLPVFVGGNSRY
NKLVITGGFGSGKSFLMQEKALVLSQLPECKGRIMYVCRFKHSENGSLFY
HSLKQQLEPHGILVKTTINSDCQGDLLKSIKSXEINVLFLDEWAIDEEFI
SSLPSSVTTVWIAPNVASQFNNFQERLQKEGFQLLKLCLNLRNSKEIVKA
SKELAEETHYRYPEGLKMPPENFPRGQTPVVVKDVEVALALALDTNHDGG
ILVAVGDGSFEDDIETISSYTVCGQVMRYQRGNITFHENCDPYRFLKTRG
AILVTDHFFITGFEYPTIIYIKKDAVPIQIFVEEHECNLYLRCTTQLIIV
DKCKQEASTEMQQLSKIFNKYVGTFDWCPLASVQKVVDVPKELVEEREIY
KHAIEENWGNNNTEVGVMSSIRNEHPHGLFGFMLRCFKLLLPALEDNEDE
NARIIKKCYAPGGLEELYYRCFNNYATDPTVCTIFMERIVELLELVIAVC
KYVGEIDD
Run BLAST on NCBI

transcript from alignment at sc0000020:281722..297991-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002496 ID=TCONS_00002496|Name=TCONS_00002496|organism=Clytia hemisphaerica|type=transcript|length=16270bp|location=Sequence derived from alignment at sc0000020:281722..297991- (Clytia hemisphaerica)
TAAAAACGTGGTGAAAAGATTATACTCGAGTATGGAGGAACGTATTCACG
AACAATTTTTAGANGAAACAATTTTGATATAAAAACGTGGTGAAAAGATT
ATACTCGAGTATGGAGGAACGTATTCACGAACAGATTTTAGAATTGAAGG
CTCGTTTAATCGACACAAGCCAGTTCATTGCACAGAACTCAATCTACCAA
CAAATAAAGAAACAGAGTGCTAAGAGTTTGAAATCACAAATCTCTCAATT
CAATTTAGGTAATGGCAAAAAGTTTCAAGATCCAATCAAAGCATCTGAGT
ACTTGCTGCAAAGAGAATATGGACAAACGTTTTTGTTCGATGAGAAACTC
AACCAACCTGTCTTCATCCCACCTGTTTTTACATCATCGCAATCTGCTGA
CAAAGCAGTTTTAGATTTCAATGTGGATAGCTCTATACAAGAGACACTTG
TCAATTTAAAACGTGACCAACCTGATTTCTGGTTCACTAAGGATCTTGAA
GCTTTCATTCAACTTCATCAGGACTCTGAAGGTCGGTTTAAGAAACTAGA
TGAAATATTTCATCCATGGATTTTAAACATGAAATTAAAATATCTTGCTA
TTCACGAGTTGAAAACTGACGGAAATGAACTGCATCTTCCTTTGGCAATC
GAAGATAAAGCTACCCTATTGAAAGATTTAATCGTTGCATTACCAAAAGA
TTCTGAGCTGCGATTGGATTTATCATCCATCGTCAATAAAAACACTGGAA
GGATTGTTGAAAATCATTTGAAAAATAAGCAGCCGACTGATTCCAATTTG
AAGTGGTTCTTCAATCTAGATCTTGGTGATAGAGGAAATCGAATCGAAAA
TTGGTTTTTCGACCAATTATTGGACGCTGATGATGAATTAGTGAGTGATC
TAGTTATTTTACAATCTGTCAATTTCTTCACCAATTTGAAGAACAAGATG
CACCAAGAGTATGACTTTCTTATCTTCTCGTGGTCTCGTAAACTCATCAT
AGGTGTGGAAATGAAAAGAAAAATCTCCATGAAAGCATTTGAACAATTAG
AAAGATATCACACGCTCTTTGAAGAACGATTGAGTGACCAATTGGAGTCA
GGATGGATCTTCTTCCCTGCTGTTTGCGTGGAGAATTCATCCACTCATTT
GATTGGTGTATCACCTCATTTCATTACAATAGAAACAAACATCGTGCAAT
GGCTTGGTCAAATATTGGCTCGCTTTCCTACGTGTCGGTATCAGGTATGT
CTGTTTAATATTATTGTAAAACCTGGCTCTAGCCACCTATAAGATGTATG
AGTTTTGGCAAGTTTGCTTTGACCAGGCTTATGGCTTACTCTTCTAGCCT
AAAAGGACATGTCTGTTTTCTTCAAGTCGGTTTATTTCATGGCGGTGATA
ACAGGTTCAAGCCTCTTCTCTTCTATAATCTTTTTTATTCTTTTTCTCCT
TGAAATAACAACATCGATGAAAATCTCGCAATTGTTGTCTAACAACTTTT
TAGTTACCCCTCATTCACCCCCTGGATCAATTGAAGAAGATATTGCAAAT
CATCGTTTTTACCGTCCATGTGTCCAAAAAACACCAACCACAACCTATCA
CCCAATCTAACTGGGTGCAATACATCGACCAAACCATCCAAACACTCTCC
AACAAAGACAACATTGTCTTTTATTCAGCCAATCAATTACCCGTTTTCGT
CGGCGGCAATTCTCGTTATAATAAACTCGTCATAACCGGTGGTTTTGGGA
GTGGCAAAAGTTTTTTGATGCAAGAGAAGGCGTTGGTGCTTAGCCAGCTG
CCTGAATGTAAAGGACGTATAATGTACGTGTGCAGATTCAAGCATTCAGA
AAATGGTAGTTTGTTTTATCATTCTTTGAAGCAGCAATTGGAACCACATG
GAATTCTTGTTAAAACGACTATTAATAGCGTAAGTTATTATACTTTTAAT
GACAATTTAACGTTAATTTAACGTGCTCATTAGTGGTAATTTTAAACAAT
TGTTGCCTGTACTCTAGACTAGTATAGTCGTTGAATGAAAATCATCACAC
CGGAAAATCTTACTAGAGTGGTAAAATCGGGAAACCGTATCTAGAACGAT
ATTCTCAAATTTCAATGTTATTTTCCTTCTCTCTCGCGCGCTAATTNNNN
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ATTTTGTTGCGCGCGGTAAATAACAGACTTGTTTACAAGTCTACCTGTAC
TCTTTTGTTGGACCTACTTCGGAGGTCCTTTAAATTAACCGATGTTCGTC
CGTCCATTCGCCTGTTCGTCTGTTACCAGCTTTTCTCAATGTTGACTCAT
TAGTTTTTTCTTATTTTTTGCACAATGATGCAAAGTGGCAATACCTAAAG
TGTACCTGAGCACGATTTTCGAAAAGAATTTCTTTTCGGCCGAAAATGCT
GGAAAAATGCCGAAAAAAACCAGTGTTTTGGCATTTTCTCGAGATTTCAT
CATTTATTTTTCCGATTTTTGGCTCAAAAATGCGTATTAGCTTATAGCAA
TGCCCGAAATGTGGCCGAGTCGGATTTTTGAGAAATTCTTTTTCAATTCG
TAAATGCTTAAAATTGCCGTTTTTGCAGATTTTCATTGGGCTTTTTTTGG
CCTTATATTTCTTTGTTATTTCTGTATATTTCTTATGCCNTTTTATCATT
CTTTGAAGCAGCAATTGGAACCACATGGAATTCTTGTTAAAACGACTATT
AATAGCGTAAGTTATTATACTTTTAATGACAATTTAACGTTAATTTAACG
TGCTCATTAGTGGTAATTTTAAACAATTGTTGCCTGTACTCTAGACTAGT
ATAGTCGTTGAATGAAAATCATCACACCGGAAAATCTTACTAGAGTGGTA
AAATCGGGAAACCGTATCTAGAACGATATTCTCAAATTTCAATGTTATTT
TCCTTCTCTCTCGCGCGCTAATTNNNNNNNNNNNNNNNNNNNNNNNNNNN
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AAATAACAGACTTGTTTACAAGTCTACCTGTACTCTTTTGTTGGACCTAC
TTCGGAGGTCCTTTAAATTAACCGATGTTCGTCCGTCCATTCGCCTGTTC
GTCTGTTACCAGCTTTTCTCAATGTTGACTCATTAGTTTTTTCTTATTTT
TTGCACAATGATGCAAAGCAGTGCAAAGTGGCAATACCTAAAGTGTACCT
GAGCACGATTTTCGAAAAGAATTTCTTTTCGGCCGAAAATGCTGGAAAAA
TGCCGAAAAAAAACCGTGTTTTGGCATTTTCTCGAGATTTCATCATTTAT
TTTTCCGATTTTTGGCTCAAAAATGCGTATTAGCTTATAGCAATGCCCGA
AATGTGGCCGAGTCGGATTTTTGAGAAATTCTTTTTCAATTCGTAAATGC
TTAAAATTGCCGTTTTTGCAGATTTTCATTGGGCTTTTTTTGGCCTTATA
TTTCTTTGTTATTTCTGTATATTTCTTATGCCCATCATCAAGCATGATTC
GATTGCCAATAAAACTGATTTTTGCAACCGGAACTTTCTATTTTTCCCCT
ACTCCACTTCCCTCCCCCCCATCAACAATCAATGATGAAATCTAATGCGT
TATGCATTTTCGCTAACAAAAGCTTTATTTTCTAACTGATTACTTTCATT
TCTCTCCTTATTGCCATCTAGCTTTCATCATCAGGTAAGTCCATTCAGCA
TCTAGCTTGTGTTTTTTAAAAGCATCTGCACAAAAAAAATTAGAAGGATC
ACTGTAAGTTTAAATTGGATAAACCTAAAGCATCTACGGACAAATCTTCA
TCTCAATATTTTCTAACCTAAAGTTTATAAAATAACCCACTTTTAATTTT
TCAGGATTGTCAAGGTGACTTGTTAAAGTCGATCAAGTCCAAAGAGATAA
ATGTTCTATTTCTCGATGAATGGGCAATCGACGAAGAATTTATCAGCAGT
CTTCCTTCATCAGTTACCACTGTATGGATAGCACCGAACGTAGCAAGTCA
ATTCAACAATTTTCAAGAACGACTCCAAAAAGAAGGATTTCAGCTCCTTA
AACTATGCCTCAATCTTAGAAACAGTAAGGAGATTGTCAAAGCATCGAAA
GAGCTAGCTGAGGAAACGCATTATCGATATCCGGAGGGTCTCAAAATGCC
GCCTGAGAATTTCCCACGTGGTCAAACACCTGTAGTTGTCAAGGATGTTG
AAGTTGCGTTGGCGCTAGCTCTAGATACGAACCATGATGGCGGAATTCTT
GTGGCTGTTGGTGATGGAAGCTTCGAGGATGACATCGAGACAATATCTTC
GTACACTGTGTGTGGTCAAGTCATGCGTTACCAGAGAGGCAACATAACCT
TCCATGAAAATTGTGATCCGTATCGATTTTTGAAAACAAGAGGCGCCATT
TTGGTTACAGATCATTTCTTTATCACCGGTTTTGAATATCCAACCATTAT
CTATATCAAAAAAGATGCAGTACCTATTCAAATTTTTGTCGAAGAGCACG
AGTGTAACCTTTATCTACGCTGCACAACGCAATTGATCATTGTCGACAAA
TGCAAACAAGAAGCGTCAACTGAGATGCAGCAATTGTCGAAGATTTTTAA
TAAATATGTTGGTACATTCGACTGGTGTCCGTTAGCGTCTGTTCAAAAGG
TTGTAGACGTGCCTAAAGAATTAGTTGAAGAACGGGAGATATACAAGCAT
GCAATTGAGGAAAACTGGGGCAATAACAACACTGAGGTAGGTGTCATGTC
GAGTATCAGAAATGAACACCCTCATGGCCTTTTTGGTTTCATGCTTCGTT
GTTTCAAGCTTCTTTTACCAGCGCTTGAAGACAACGAGGATGAAAATGCA
AGAATCATAAAGAAATGCTATGCACCTGGTGGGTTAGAAGAGCTTTATTA
TCGTTGTTTTAACAATTATGCGACAGATCCGACAGTATGTACGATTTTTA
TGGAAAGAATCGTTGAATTGTTGGAACTGGTCATGGCCGTTTGTAAATAT
GTTGGTGAAATTGATGATTAATAAAATCTTCAAAAATACGAAAAAGGAGG
AACTTCATTGACTGGCTAATTTTTACGCTGTACCTTATTGTACCCATTTG
TTAATATTTTTCAATTTTAAAAATAGTTGTATTTCCATTTGTTGTGCGCG
CTTTTGTGATAATTGCGCCAATTCGTAATATGTACCTGCGCAAATTTGTA
AAAATTGTTTCGCTATTTTATAATGCCTACGTGCAAATTTGTGATAACCG
TTGCGCTTTCGACTGCGCTTTTTTTGTAATTTCCGACTGCGCAGAAATGT
AATACTACTTCCCTGATTTGGATTTTTTTTAAACATAGAAGGAGCATATT
TTATCCTACTAAGAAAATATTGAAAAAAAAAGAATCTTGATCAGTCTTGA
TCATTATATAGCATAGTATCACTTTTGTAAGGTAAACTCGATAAATCATG
ATATAGTAAATATTTCTTGTTTAATTCAAAGTAAACAATATACATGCTTC
CAATGTCTGTACGCAATATTCTCTTTTCTTTGTAAAATCATAGTATAAGA
AAGCTGCGGCTGGAATGAGTGGAGCTGAATTTCTGTTGTTCTATCTATGT
CGTAAGAACCTATTTTGTTATGGTTCAGTGACAATATACATTGCCAGTTT
AAAATCACTTTTAACAAACTCCCTAGTAAGACGTAATACAAATCTCTTGA
TAGTTCACGCATTCATAAGATCAAAGTGGCGTACTGTATAATCAGGACCT
AGACTGTACCCTGGGTGGTTAGAAAACCTGGACCCCAGACCCTTACGAAA
ACACGGACCCCTGTAAATTTTGAGAAACGCGGACCCCTTCCTTCGAATTT
TTGCGAAAACAGGGACCCCCTTAAATTTTCGAGAAAGTACAGACCGTCTC
AATTTTTTGTGAAAACACTCTCCCTCTGCTACCATTTAATCAAAAGGAAA
TTTTGACAAGTGCTTTGACTTTAGAATTTTAAACATTGGTAGATATGGAT
AGTAAGATGATTTGCAAAATTTTGGTTCGTTTACCTGTCTAATTAGTATT
TTACAGACCAGAATGNTGTGGTCAAGTCATGCGTTACCAGAGAGGCAACA
TAACCTTCCATGAAAATTGTGATCCGTATCGATTTTTGAAAACAAGAGGC
GCCATTTTGGTTACAGATCATTTCTTTATCACCGGTTTTGAATATCCAAC
CATTATCTATATCAAAAAAGATGCAGTACCTATTCAAATTTTTGTCGAAG
AGCACGAGTGTAACCTTTATCTACGCTGCACAACGCAATTGATCATTGTC
GACAAATGCAAACAAGAAGCGTCAACTGAGATGCAGCAATTGTCGAAGAT
TTTTAATAAATATGTTGGTACATTCGACTGGTGTCCGTTAGCGTCTGTTC
AAAAGGTTGTAGACGTGCCTAAAGAATTAGTTGAAGAACGGGAGATATAC
AAGCATGCAATTGAGGAAAACTGGGGCAATAACAACACTGAGGTAGGTGT
CATGTCGAGTATCAGAAATGAACACCCTCATGGCCTTTTTGGTTTCATGC
TTCGTTGTTTCAAGCTTCTTTTACCAGCGCTTGAAGACAACGAGGATGAA
AATGCAAGAATCATAAAGAAATGCTATGCACCTGGTGGGTTAGAAGAGCT
TTATTATCGTTGTTTTAACAATTATGCGACAGATCCGACAGTATGTACGA
TTTTTATGGAAAGAATCGTTGAATTGTTGGAACTGGTCATGGCCGTTTGT
AAATATGTTGGTGAAATTGATGATTAATAAAATCTTCAAAAATACGAAAA
AGGAGGAACTTCATTGACTGGCTAATTTTTACGCTGTACCTTATTGTACC
CATTTGTTAATATTTTTCAATTTTAAAAATAGTTGTATTTCCATTTGTTG
TGCGCGCTTTTGTGATAATTGCGCCAATTCGTAATATGTACCTGCGCAAA
TTTGTAAAAATTGTTTCGCTATTTTATAATGCCTACGTGCAAATTTGTGA
TAACCGTTGCGCTTTCGACTGCGCTTTTTTTGTAATTTCCGACTGCGCAG
AAATGTAATACTACTTCCCTGATTTGGATTTTTTTTAAACATAGAAGGAG
CATATTTTATCCTACTAAGAAAATATTGAAAAAAAAAGAATCTTGATCAG
TCTTGATCATTATATAGCATAGTATCACTTTTGTAAGGTAAACTCGATAA
ATCATGATATAGTAAATATTTCTTGTTTAATTCAAAGTAAACAATATACA
TGCTTCCAATGTCTGTACGCAATATTCTCTTTTCTTTGTAAAATCATAGT
ATAAGAAAGCTGCGGCTGGAATGAGTGGAGCTGAATTTCTGTTGTTCTAT
CTATGTCGTAAGAACCTATTTTGTTATGGTTCAGTGACAATATACATTGC
CAGTTTAAAATCACTTTTAACAAACTCCCTAGTAAGACGTAATACAAATC
TCTTGATAGTTCACGCATTCATAAGATCAAAGTGGCGTACTGTATAATCA
GGACCTAGACTGTACCCTGGGTGGTTAGAAAACCTGGACCCCAGACCCTT
ACGAAAACACGGACCCCTGTAAATTTTGAGAAACGCGGACCCCTTCCTTC
GAATTTTTGCGAAAACAGGGACCCCCTTAAATTTTCGAGAAAGTACAGAC
CGTCTCAATTTTTTGTGAAAACACTCTCCCTCTGCTACCATTTAATCAAA
AGGAAATTTTGACAAGTGCTTTGACTTTAGAATTTTAAACATTGGTAGAT
ATGGATAGTAAGATGATTTGCAAAATTTTGGTTCGTTTACCTGTCTAATT
AGTATTTTACAGACCAGAATGCAAACTTGACCAAAATCATGTATTTACTT
GATTGACTCGTTCGATTTGACTAAAATTTGTTCCTTGAGGCTGATTTGTC
AAATAAAAAAGACTAGGAAGGCTAGGAACAGAAAAACTCTTTCCCATGAG
TATTTGGTACTTTGCAGACCAGTCTGTAAAATACAAGTTGACCACCTGCT
GGAACCCAGGAACTGCTGGACACTTTGACTTGAAACTTGAAAGTGATAGA
TACTGACCATCTAAGACAATGTGTAAAATTTCAATTTAGTCACGTGAGCG
GTTGGTACTACACTTAATCGTGCCATCCATTCTATAAAGATGCTGTTAGT
GGACCCTGAGCTAGTGTTCAAATAACTATCAACAACTTTTTACAAGGATC
CATATTTGAAATTCAACAGCTCAATACTTCCATCTGTATACCAAGGACCT
CCTTTCCAAATCTCCACATCTTCCCAAATCAAACATTCCAAATTAACAAC
ATTAACAAAATACCAATGATTGATTTTGCTTACCAAACTGCATCTTTCAC
CGTATTTCCTCATTTCAACATAAACGCTATACTCTTTTCCAGGGTTTATT
GTTTGGTGGAAATTTCTTGTATATCTAAACAAATATCCACCATTTGATCT
CGTCACCATGGCCAGTTCAAGTTTCTTTGTTGATCGATTCAAATGAAATC
CTGGTAAATCACTTCCTGAGGCTGGATCTCTACTCTCGATGTTTTTTTTC
TTGAAATGAATGATGGAAACCCAATCACTTGTGGTGTATTCGGTCACTTT
GAAGGTGAATAGGACATACCAATACTCTGGAAATACTGGAATACTCTCCA
ACAGTTGGGTTCTGATTTCTTGTCCTAGAGGAATAAAATTGAAATCGGGT
CTTTATCCAAACTCTTAAAGTAGGGTCTTTCTTTAAAGGTCTNAAGAGAT
AAATGTTCTATTTCTCGATGAATGGGCAATCGACGAAGAATTTATCAGCA
GTCTTCCTTCATCAGTTACCACTGTATGGATAGCACCGAACGTAGCAAGT
CAATTCAACAATTTTCAAGAACGACTCCAAAAAGAAGGATTTCAGCTCCT
TAAACTATGCCTCAATCTTAGAAACAGTAAGGAGATTGTCAAAGCATCGA
AAGAGCTAGCTGAGGAAACGCATTATCGATATCCGGAGGGTCTCAAAATG
CCGCCTGAGAATTTCCCACGTGGTCAAACACCTGTAGTTGTCAAGGATGT
TGAAGTTGCGTTGGCGCTAGCTCTAGATACGAACCATGATGGCGGAATTC
TTGTGGCTGTTGGTGATGGAAGCTTCGAGGATGACATCGAGACAATATCT
TCGTACACTGTGTGTGGTCAAGTCATGCGTTACCAGAGAGGCAACATAAC
CTTCCATGAAAATTGTGATCCGTATCGATTTTTGAAAACAAGAGGCGCCA
TTTTGGTTACAGATCATTTCTTTATCACCGGTTTTGAATATCCAACCATT
ATCTATATCAAAAAAGATGCAGTACCTATTCAAATTTTTGTCGAAGAGCA
CGAGTGTAACCTTTATCTACGCTGCACAACGCAATTGATCATTGTCGACA
AATGCAAACAAGAAGCGTCAACTGAGATGCAGCAATTGTCGAAGATTTTT
AATAAATATGTTGGTACATTCGACTGGTGTCCGTTAGCGTCTGTTCAAAA
GGTTGTAGACGTGCCTAAAGAATTAGTTGAAGAACGGGAGATATACAAGC
ATGCAATTGAGGAAAACTGGGGCAATAACAACACTGAGGTAGGTGTCATG
TCGAGTATCAGAAATGAACACCCTCATGGCCTTTTTGGTTTCATGCTTCG
TTGTTTCAAGCTTCTTTTACCAGCGCTTGAAGACAACGAGGATGAAAATG
CAAGAATCATAAAGAAATGCTATGCACCTGGTGGGTTAGAAGAGCTTTAT
TATCGTTGTTTTAACAATTATGCGACAGATCCGACAGTATGTACGATTTT
TATGGAAAGAATCGTTGAATTGTTGGAACTGGTCATAGCCGTTTGTAAAT
ATGTTGGTGAAATTGATGATTAATAAAATCTTCAAAAATACGAAAAAGGA
GGAACTTCATTGACTGGCTAATTTTTACGCTGTACCTTATTGTACCCATT
TGTTAATATTTTTCAATTTTAAAAATAGTTGTATTTCCATTTGTTGTGCG
CGCTTTTGTGATAATTGCGCCAATTCGTAATATGTACCTGCGCAAATTTG
TAAAAATTGTTTCGCTATTTTATAATGCCTACGTGCAAATTTGTGATAAC
CGTTGCGCTTTCGACTGCGCTTTTTTTGTAATTTCCGACTGCGCAGAAAT
GTAATACTACTTCCCTGATTTGGATTTTTTTTAAACATAGAAGGAGCATA
TTTTATCCTACTAAGAAAAT

Coding sequence (CDS) from alignment at sc0000020:281722..297991-

>TCONS_00002496 ID=TCONS_00002496|Name=TCONS_00002496|organism=Clytia hemisphaerica|type=CDS|length=2727bp|location=Sequence derived from alignment at sc0000020:281722..297991- (Clytia hemisphaerica)
ATGGAGGAACGTATTCACGAACAGATTTTAGAATTGAAGGCTCGTTTAAT
CGACACAAGCCAGTTCATTGCACAGAACTCAATCTACCAACAAATAAAGA
AACAGAGTGCTAAGAGTTTGAAATCACAAATCTCTCAATTCAATTTAGGT
AATGGCAAAAAGTTTCAAGATCCAATCAAAGCATCTGAGTACTTGCTGCA
AAGAGAATATGGACAAACGTTTTTGTTCGATGAGAAACTCAACCAACCTG
TCTTCATCCCACCTGTTTTTACATCATCGCAATCTGCTGACAAAGCAGTT
TTAGATTTCAATGTGGATAGCTCTATACAAGAGACACTTGTCAATTTAAA
ACGTGACCAACCTGATTTCTGGTTCACTAAGGATCTTGAAGCTTTCATTC
AACTTCATCAGGACTCTGAAGGTCGGTTTAAGAAACTAGATGAAATATTT
CATCCATGGATTTTAAACATGAAATTAAAATATCTTGCTATTCACGAGTT
GAAAACTGACGGAAATGAACTGCATCTTCCTTTGGCAATCGAAGATAAAG
CTACCCTATTGAAAGATTTAATCGTTGCATTACCAAAAGATTCTGAGCTG
CGATTGGATTTATCATCCATCGTCAATAAAAACACTGGAAGGATTGTTGA
AAATCATTTGAAAAATAAGCAGCCGACTGATTCCAATTTGAAGTGGTTCT
TCAATCTAGATCTTGGTGATAGAGGAAATCGAATCGAAAATTGGTTTTTC
GACCAATTATTGGACGCTGATGATGAATTAGTGAGTGATCTAGTTATTTT
ACAATCTGTCAATTTCTTCACCAATTTGAAGAACAAGATGCACCAAGAGT
ATGACTTTCTTATCTTCTCGTGGTCTCGTAAACTCATCATAGGTGTGGAA
ATGAAAAGAAAAATCTCCATGAAAGCATTTGAACAATTAGAAAGATATCA
CACGCTCTTTGAAGAACGATTGAGTGACCAATTGGAGTCAGGATGGATCT
TCTTCCCTGCTGTTTGCGTGGAGAATTCATCCACTCATTTGATTGGTGTA
TCACCTCATTTCATTACAATAGAAACAAACATCGTGCAATGGCTTGGTCA
AATATTGGCTCGCTTTCCTACGTGTCGGTATCAGTTACCCCTCATTCACC
CCCTGGATCAATTGAAGAAGATATTGCAAATCATCGTTTTTACCGTCCAT
GTGTCCAAAAAACACCAACCACAACCTATCACCCAATCTAACTGGGTGCA
ATACATCGACCAAACCATCCAAACACTCTCCAACAAAGACAACATTGTCT
TTTATTCAGCCAATCAATTACCCGTTTTCGTCGGCGGCAATTCTCGTTAT
AATAAACTCGTCATAACCGGTGGTTTTGGGAGTGGCAAAAGTTTTTTGAT
GCAAGAGAAGGCGTTGGTGCTTAGCCAGCTGCCTGAATGTAAAGGACGTA
TAATGTACGTGTGCAGATTCAAGCATTCAGAAAATGGTAGTTTGTTTTAT
CATTCTTTGAAGCAGCAATTGGAACCACATGGAATTCTTGTTAAAACGAC
TATTAATAGCGATTGTCAAGGTGACTTGTTAAAGTCGATCAAGTCTNAAG
AGATAAATGTTCTATTTCTCGATGAATGGGCAATCGACGAAGAATTTATC
AGCAGTCTTCCTTCATCAGTTACCACTGTATGGATAGCACCGAACGTAGC
AAGTCAATTCAACAATTTTCAAGAACGACTCCAAAAAGAAGGATTTCAGC
TCCTTAAACTATGCCTCAATCTTAGAAACAGTAAGGAGATTGTCAAAGCA
TCGAAAGAGCTAGCTGAGGAAACGCATTATCGATATCCGGAGGGTCTCAA
AATGCCGCCTGAGAATTTCCCACGTGGTCAAACACCTGTAGTTGTCAAGG
ATGTTGAAGTTGCGTTGGCGCTAGCTCTAGATACGAACCATGATGGCGGA
ATTCTTGTGGCTGTTGGTGATGGAAGCTTCGAGGATGACATCGAGACAAT
ATCTTCGTACACTGTGTGTGGTCAAGTCATGCGTTACCAGAGAGGCAACA
TAACCTTCCATGAAAATTGTGATCCGTATCGATTTTTGAAAACAAGAGGC
GCCATTTTGGTTACAGATCATTTCTTTATCACCGGTTTTGAATATCCAAC
CATTATCTATATCAAAAAAGATGCAGTACCTATTCAAATTTTTGTCGAAG
AGCACGAGTGTAACCTTTATCTACGCTGCACAACGCAATTGATCATTGTC
GACAAATGCAAACAAGAAGCGTCAACTGAGATGCAGCAATTGTCGAAGAT
TTTTAATAAATATGTTGGTACATTCGACTGGTGTCCGTTAGCGTCTGTTC
AAAAGGTTGTAGACGTGCCTAAAGAATTAGTTGAAGAACGGGAGATATAC
AAGCATGCAATTGAGGAAAACTGGGGCAATAACAACACTGAGGTAGGTGT
CATGTCGAGTATCAGAAATGAACACCCTCATGGCCTTTTTGGTTTCATGC
TTCGTTGTTTCAAGCTTCTTTTACCAGCGCTTGAAGACAACGAGGATGAA
AATGCAAGAATCATAAAGAAATGCTATGCACCTGGTGGGTTAGAAGAGCT
TTATTATCGTTGTTTTAACAATTATGCGACAGATCCGACAGTATGTACGA
TTTTTATGGAAAGAATCGTTGAATTGTTGGAACTGGTCATAGCCGTTTGT
AAATATGTTGGTGAAATTGATGATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001336XLOC_001336Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002496-exon-sc0000020-1575043694:296748..297991TCONS_00002496-exon-sc0000020-1575043694:296748..297991Clytia hemisphaericaexon
TCONS_00002496-exon-sc0000020-1575043694:296095..296488TCONS_00002496-exon-sc0000020-1575043694:296095..296488Clytia hemisphaericaexon
TCONS_00002496-exon-sc0000020-1575043694:292336..292367TCONS_00002496-exon-sc0000020-1575043694:292336..292367Clytia hemisphaericaexon
TCONS_00002496-exon-sc0000020-1575043694:288056..288087TCONS_00002496-exon-sc0000020-1575043694:288056..288087Clytia hemisphaericaexon
TCONS_00002496-exon-sc0000020-1575043694:281722..283203TCONS_00002496-exon-sc0000020-1575043694:281722..283203Clytia hemisphaericaexon
TCONS_00002496-exon-sc0000020-1510915933:296748..297991TCONS_00002496-exon-sc0000020-1510915933:296748..297991Clytia hemisphaericaexon
TCONS_00002496-exon-sc0000020-1510915933:296095..296488TCONS_00002496-exon-sc0000020-1510915933:296095..296488Clytia hemisphaericaexon
TCONS_00002496-exon-sc0000020-1510915933:292336..292367TCONS_00002496-exon-sc0000020-1510915933:292336..292367Clytia hemisphaericaexon
TCONS_00002496-exon-sc0000020-1510915933:288056..288087TCONS_00002496-exon-sc0000020-1510915933:288056..288087Clytia hemisphaericaexon
TCONS_00002496-exon-sc0000020-1510915933:281722..283203TCONS_00002496-exon-sc0000020-1510915933:281722..283203Clytia hemisphaericaexon
TCONS_00002496-exon-sc0000020-1491911889:296748..297991TCONS_00002496-exon-sc0000020-1491911889:296748..297991Clytia hemisphaericaexon
TCONS_00002496-exon-sc0000020-1491911889:296095..296488TCONS_00002496-exon-sc0000020-1491911889:296095..296488Clytia hemisphaericaexon
TCONS_00002496-exon-sc0000020-1491911889:292336..292367TCONS_00002496-exon-sc0000020-1491911889:292336..292367Clytia hemisphaericaexon
TCONS_00002496-exon-sc0000020-1491911889:288056..288087TCONS_00002496-exon-sc0000020-1491911889:288056..288087Clytia hemisphaericaexon
TCONS_00002496-exon-sc0000020-1491911889:281722..283203TCONS_00002496-exon-sc0000020-1491911889:281722..283203Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002496-proteinTCONS_00002496-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000020supercontigsc0000020:281722..297991 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.429311	0	0	0.2642	0	2.6634e-06	0.0306637	9.22446e-07	0	6.76335e-06	0	8.99431e-07	1.8135	2.95285	1.48398	1.97589	0.666418	1.09072	2.55694	1.81994	2.96192	1.42044	0.652857	1.98942	2.85361	3.26225	1.89575	2.862	4.66833e-06	0.215769
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002496 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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