TCONS_00002823 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002823
Unique NameTCONS_00002823
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2318

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002823 ID=TCONS_00002823|Name=TCONS_00002823|organism=Clytia hemisphaerica|type=transcript|length=2318bp
AATATTAATAAACGAAAATCATCATATCATTAATGTTATGGGTaaagtta
agaaaaaagaaaaatcaattggAAAGTGCCAAAATACTCGAGAACCCGTA
TTTCACTTGGGGATGTTCTGATGATCTAGCATTGAGATTGAAGAAAACTC
TTTACTGCTCTGAAGATGATGATTGTTATGACGTTTCATCCATTGCACTA
ACAGATGTTGCTGTATCTATTCTCAAAGAATCAGCAAGATGTTCTAGAAG
GAAGATAACACATCGCTATGCAAGCTCGTTAACCAGgCAGCTTTCCATAT
CACCATGTGCACTTATAATGAGCTTGTTGTACTCAGAAAGACTCCGACAA
TGTAATCCAGGTTATTTGGACCGTATCTCGTCCTCTGATTTGTATGTCAT
CTCAATGTTGGTGGCTACAAAATTTTTACACGATGAaggagaacaagaag
aaatcTACAATGACGAATGGGCTGAAGCtgCTGGACTAGCAGTTTCAACT
GTCAACCGTTTGGAAAGAGAATTCCTGGACGCCATCgaTTGGAATATTTA
CGTTAAACCGGCCGATTTCCTTGACTATTGCTCGAAAATTGAAACCAAGA
TAGCTTTAAAGTATGGATTGCAACGCGGATGGTTTTCATACACCGACCTC
GCACAATTCTTACACGCCATACAATACCAGACTGTTTTGAAAGACGTCAT
CGAAAAGACGGTCACTgTCATCTGTGGTTGTGCTTTGGTTTATGGTATGT
CACTCAGCATTCTCGTTTCCACCGCCCTCACTTACGCCTCTCAAACAAGC
CACCGCATTCAAACGATCACCCAAACATCGACCAATCACACCCGTGTAAA
TGATTTCACGCCTTTATCAATGTTGCCTTCTTCAAGCATATTCGCCAGTT
TCTCCGACCGTCGACTGACCCGTAGACGAGGCTTCAGAAGCCATCGCAAA
ACAACAGATATGAACGCCAACCAACCCGAAGCAAATCTCGAAGAAATAAG
CGATCTTGCTCTTGAACGCTTACAGGAAAATGTAACCGCCTCACGCCCAA
CACTGCCTTGCACGGCAGATTCCCAAACACACGCCTTACGCTTTGAATCG
CAACTCCAACACAGGGCACGGCAAACACGGCTTTCAATCACGTTCGACTT
GACAGATCGCCGATTCATGGCATTCGACGAGGTTGGATATCACgaagaat
tttcgaaaaacgtTGCAAAATGTTATGGTTACGCGGCTACAAATGTAAAG
AAGAAGATTGACCCTATTGGAAGCATTTTACGTCGGAACGCAAAGAAGTT
TATGTATGATCCTCGTATCCTAGGAATGACTGTTATTTAATTGATCGTTT
TTCTCACTACTATTTTTTTCACTACAGTATTCTTAATTCAACCTTCCTAT
CTCATAACCCAAAATTCACCATTTTATGTGTTTGTTTATTTGAAATTGCC
TGCCTGTTTAGTCCAACAAATCTGTTCTTTTGTACGCATTTTCTTCCTGT
AAACTTAACAACTATGCCATATTAGTACATAGGCTTAGAATTGTGCTTTG
TTTCGATACTGTATAAATGATTTAATCAATATGTAATACATTATCATAAT
ACAAGGTGTCCCGGAAAAAAAGCACTATATCAAACCCTGACACAGTAATT
TTTTCGAGACACACCATATTCTCCGTATTTCtaattttcattaaagctcT
CTAGTGTTTCTGTTTTTTATGGGTAATATCACTCCCGAAGTAGCCAATTC
TTTAGACTTAGACCACTATAAACAGCTCCAGGCTCCAAGCTCCAACTTAG
TCTATGAGCACTcttataggcggccactagtgacccccctAACCGGAAAC
TTGTGCGGAGCGAAAGaagataaattaaaattttgctcaTCCCTTATTAA
ACATCGTGTCTTTTGAGACCACGTTCACACACTACGGTtctgtttcgctc
cgaaacgaaaagaagtcattctattggttaagTTCAAGTCTTACGTCAAT
TCTAACCAATAAAATGGCTTCGTTTCGGAGGGAAACGGAACAGTTACGTG
CGAACACAGTCTCAGCTTTAGGAAATAAGCAATCATATTATGTACATGTC
TATGTCGTTTGAAGAAGTTTCCTTAAAATTGAGAATAAAACTTGAATTAC
TACCAAGTCAAGTAAATTCGTTTCTTCAATTTATTCCCCTCCTTTTGTAG
ttgtcatttttttgtaaaagattttttacagtaTTGAATATTTGTAGTAT
ATTAGCTAGCCATGTACCTATACCGTATGGATATAATCACTTTCAATAAA
TGTGTTTATATAGCAATG
Run BLAST on NCBI

protein sequence of TCONS_00002823-protein

>TCONS_00002823-protein ID=TCONS_00002823-protein|Name=TCONS_00002823-protein|organism=Clytia hemisphaerica|type=polypeptide|length=435bp
MLWVKLRKKKNQLESAKILENPYFTWGCSDDLALRLKKTLYCSEDDDCYD
VSSIALTDVAVSILKESARCSRRKITHRYASSLTRQLSISPCALIMSLLY
SERLRQCNPGYLDRISSSDLYVISMLVATKFLHDEGEQEEIYNDEWAEAA
GLAVSTVNRLEREFLDAIDWNIYVKPADFLDYCSKIETKIALKYGLQRGW
FSYTDLAQFLHAIQYQTVLKDVIEKTVTVICGCALVYGMSLSILVSTALT
YASQTSHRIQTITQTSTNHTRVNDFTPLSMLPSSSIFASFSDRRLTRRRG
FRSHRKTTDMNANQPEANLEEISDLALERLQENVTASRPTLPCTADSQTH
ALRFESQLQHRARQTRLSITFDLTDRRFMAFDEVGYHEEFSKNVAKCYGY
AATNVKKKIDPIGSILRRNAKKFMYDPRILGMTVI
Run BLAST on NCBI

transcript from alignment at sc0000023:749924..768294+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002823 ID=TCONS_00002823|Name=TCONS_00002823|organism=Clytia hemisphaerica|type=transcript|length=18371bp|location=Sequence derived from alignment at sc0000023:749924..768294+ (Clytia hemisphaerica)
AATATTAATAAACGAAAATCATCATATCATTAATGTTATGGGTaaagtta
agaaaaaagaaaaatcaattggAAAGTGCCAAAATACTCGAGGTATTCTt
ttaattctttgtattttatttatatcattatttacttatctcaacttcaa
tttattgtgtattttatttatatatatttttcaaattacacCGGTGATTT
TGGGAAAAAGTATCGAGTCAAACTTCTTAACAACCCATTCTCACAGACCA
ACTGGGAACCCTTTCCACTGAAAAAAATTGCCCAAACTAtcgtcctgggt
ggaaaatttatcttcaattttgtccccactgaaaataatcaaataagcca
atcctcaatgcaaaatatttactatttttctcgttcccactgaattttct
gacttgaaaacaaaagaattgaaattcccatttgtaaaaaaaagagaATC
TCAATCCCCCCCATCAAGTTTCAATTAATCCTCcgccatttttattttaa
tgttgttTCAGTACATTATCCTTTTTTTTCGTATTTGAACTgatttgaag
tattttgctGGAAAAAATTACTTTCTTATAATGAAATGTAAGGGGTCTTG
AATCgagtaaatgaaaaaatccagaaatttcAACAACAATGCGAATAAAG
CAGAAGCTTGATGATTTCAATTTAATTAAATTTACCTTATAAAGATAACA
CAAAGACTACTCTATTTCAAAAAGGTATTTCCAAAAAACAAATGTTACCA
ATCAAATTGTCGTTTATTTAAGTGCGTACATGAACGTGTGTATGCCATTA
TCACATTTTAGTAACAAACAATtaccaaaacacaaaacaacatCCACACG
ATGAGAAACAcgcaaaataattttctggCGGTGGAAACATTTGAGAGGGA
AAGAAAACTTTTGGCGGTAACTAAACCTGGACGaaactttttcagaaaaa
tgatACTCTACTTTTTCCCAGACAACCCTTTTTTGTATTTCATGTTTTGT
GTGGATATCAGTATGAAAAATACTGgtctattatttttttcaaaaattct
aaaaaaagtcTTCTCTTAATATGGCTAGGAAAAGTCCTTAAAGTGTGATA
TCTTTGAATTGAATTGTCAAATGCTTTGGTCGATAATTTATagtttcaaa
ataataatatctttaaaaaactcataattttttaaattttatctgACGTA
TTCACAATGAAAATTTCGCCGTAAAAATTTAGTCAAAAATAATTGTTTAT
TGAATAAAGTTCGATTGGTGGAGTTTGtacaaatcaaaaatttgaggTGA
AATAAATGATTCAAAATCACTATTCGTTACCGACCCTAATTTTTAATACG
TTGCCGATCCTTTTTTCCGATTGTTACCAACCTTAACTTCAAATCGTTAC
CTGCTCCTACTTACTAAATTTTATATCCAATTGATCCTGATTCAAACTGT
CCAAATTTTAAAACTTGATAACTGACCCATTTCTTCAATTgttaggcaat
tacttttttattttctggtttacggaatcgccgtcgttttttttgcaaaa
ataaaataaaaataaaattggattttacaaatattttatttatttatgct
CTTCCGACCTTGCACTGAACAGCCATAAAAAGgaaactttatagaaaatt
acattttataaaagcaagAAGGGCAAGTTAAAGGGTCAGTGTCCAGGCCT
TTAATAACTTAAACACAATTTCCCTACTAAAAACGTTCTTTAATGTATGT
AAGTTttctcaaaacatatttttttaattttttacaacattaaagtttga
aaagagcaattttatttttatttttttccgcCCTCCGGTCCAAAAGATCA
TCTCcaaatgtccgtaaaccagaaaataaaaaagtaattgccttacCAAT
CTTAATTTCCTATCAATACCGACCATGATTTAAACTGAATGATGATTCAA
CAACAAGAGAAATATCAACTGATGTTTCAACACGAAGAGAATGATGGATA
AATGATCCATTATTTCCAATCGATACCAACCCTAACCTACAATCGATACC
GACCCTACTTTCCGATAAATAAACTTACAACCGATACCTAACTTACAGTA
CAATCGATACCTAGCCAAACTTTCAATCACCACCGACCTAAATCcgtgat
gtttcaacaacaaaaagatgggagagtgatgtttcaacaacaagaagagg
gcagagtgatgtttcaacaacaagaagaggacAGAGTGGTGTTTcagcaa
caacaagaagaggggagagtgatgtttcaacaacaagaagaggacAGAGT
AgtgtttcaacaacaacaagaggGGAGAGTGGTGcttcaacaacaagaag
agggaAGAGTGATgcttcaacaacaacaagagggaagagtgatgtttcaa
caacaacaacagggGAGAGTGGTATTTCATCAACAAGAGGAGGGCAGGtt
gatgtttcaacaacaagaagaggacAGAGTggtgtttcaacaacaagagg
AGGGCAGGATGATGTTTCAACAATAAGAAGAGGACAGAGTggtgtttcaa
caacaagaagaggggagagtgatgtttcaacaacaagaagaggacAGAGT
GGTGTTTcagcaacaacaagaagaggggagagtgatgtttcaacaacaag
aagaggacAGAGTGGTGTTTcagcaacaacaagaagaggggagagtgatg
tttcaacaacaagaagaggacAGAGTGGTGTTTcagcaacaacaagaaga
ggggagagtgatgtttcaacaacaagaagaggacAGAGTGGTGTTTcagc
aacaacaagaagaggggagagtgatgtttcaacaacaagaagaggacAGA
GTGGTGTTTcagcaacaacaagaagaggggagagtgatgtttcaacaaca
agaagaggacAGAGTGGTGTTTcagcaacaacaagaagaggggagagtga
tgtttcaacaacaagaagaggacAGAGTGGTGTTTcagcaacaacaagaa
gaggggagagtgatgtttcaacaacaagaagaggacAGAGTGGTGTTTca
gcaacaacaagaagaggggagagtgatgtttcaacaacaagaagaggacA
GAGTGGTGTTTcagcaacaacaagaagaggggagagtgatgtttcaacaa
caagaagaggacAGAGTGGTGTTTcagcaacaacaagaagaggggagagt
gatgtttcaacaacaagaagaggacAGAGTGGTGTTTcagcaacaacaag
aagaggggagagtgatgtttcaacaacaagaagaggacAGAGTGGTGTTT
cagcaacaacaagaagaggggagagtgatgtttcaacaacaagaagagga
cAGAGTGGTGTTTcagcaacaacaagaagaggggagagtgatgtttcaac
aacaagaagaggacAGAGTGGTGTTTcagcaacaacaagaagaggggaga
gtgatgtttcaacaacaagaagaggacAGAGTGGTGTTTcagcaacaaca
agaagaggggagagtgatgtttcaacaacaagaagaggacAGAGTGGTGT
TTcagcaacaacaagaagaggggagagtgatgtttcaacaacaagaagag
gacAGAGTGGTGTTTcagcaacaacaagaagaggggagagtgatgtttca
acaacaagaagaggacAGAGTGGTGTTTcagcaacaacaagaagagggga
gagtgatgtttcaacaacaagaagaggacAGAGTGGTGTTTcagcaacaa
caagaagaggggagagtgatgtttcaacaacaagaagaggacAGAGTGGT
GTTTcagcaacaacaagaagaggggagagtgatgtttcaacaacaagaag
aggacAGAGTGGTGTTTcagcaacaacaagaagaggggagagtgatgttt
caacaacaagaagaggacAGAGTGGTGTTTcagcaacaacaagaagaggg
gagagtgatgtttcaacaacaagaagaggacAGAGTGGTGTTTcagcaac
aacaagaagaggggagagtgatgtttcaacaacaagaagaggacAGAGTG
GTGTTTcagcaacaacaagaagaggggagagtgatgtttcaacaacaaga
agaggacAGAGTGGTGTTTcagcaacaacaagaagaggggagagtgatgt
ttcaacaacaagaagaggacAGAGTGGTGTTTcagcaacaacaagaagag
gggagagtgatgtttcaacaacaagaagaggacAGAGTGGTGTTTcagca
acaacaagaagaggggagagtgatgtttcaacaacaagaagaggacAGAG
TGGTGTTTcagcaacaacaagaagaggggagagtgatgtttcaacaacaa
gaagaggacAGAGTGGTGTTTcagcaacaacaagaagaggggagagtgat
gtttcaacaacaagaagaggacAGAGTGGTGTTTcagcaacaacaagaag
aggggagagtgatgtttcaacaacaagaagaggacAGAGTGGTGTTTcag
caacaacaagaagaggggagagtgatgtttcaacaacaagaagaggacAG
AGTGGTGTTTcagcaacaacaagaagaggggagagtgatgtttcaacaac
aagaagaggacAGAGTGGTGTTTcagcaacaacaagaagaggggagagtg
atgtttcaacaacaagaagaggacAGAGTGGTGTTTcagcaacaacaaga
agaggggagagtgatgtttcaacaacaagaagaggacAGAGTGGTGTTTc
agcaacaacaagaagaggggagagtgatgtttcaacaacaagaagaggac
AGAGTGGTGTTTcagcaacaacaagaagaggggagagtgatgtttcaaca
acaagaagaggacAGAGTGGTGTTTcagcaacaacaagaagaggggagag
tgatgtttcaacaacaagaagaggacAGAGTGGTGTTTcagcaacaacaa
gaagaggggagagtgatgtttcaacaacaagaagaggacAGAGTGGTGTT
Tcagcaacaacaagaagaggggagagtgatgtttcaacaacaagaagagg
acAGAGTGGTGTTTcagcaacaacaagaagaggggagagtgatgtttcaa
caacaagaagaggacAGAGTGGTGTTTcagcaacaacaagaagaggggag
agtgatgtttcaacaacaagaagaggacAGAGTGGTGTTTcagcaacaac
aagaagaggggagagtgatgtttcaacaacaagaagaggacAGAGTGGTG
TTTcagcaacaacaagaagaggggagagtgatgtttcaacaacaagaaga
ggacAGAGTGGTGTTTcagcaacaacaagaagaggggagagtgatgtttc
aacaacaagaagaggacAGAGTGGTGTTTcagcaacaacaagaagagggg
agagtgatgtttcaacaacaagaagaggacAGAGTGGTGTTTcagcaaca
acaagaagaggggagagtgatgtttcaacaacaagaagaggacAGAGTGG
TGTTTcagcaacaacaagaagaggggagagtgatgtttcaacaacaagaa
gaggacAGAGTGGTGTTTcagcaacaacaagaagaggggagagtgatgtt
tcaacaacaagaagaggacAGAGTGGTGTTTcagcaacaacaagaagagg
ggagagtgatgtttcaacaacaagaagaggacAGAGTGGTGTTTcagcaa
caacaagaagaggggagagtgatgtttcaacaacaagaagaggacAGAGT
GGTGTTTcagcaacaacaagaagaggggagagtgatgtttcaacaacaag
aagaggacAGAGTGGTGTTTcagcaacaacaagaagaggggagagtgatg
tttcaacaacaagaagaggacAGAGTGGTGTTTcagcaacaacaagaaga
ggggagagtgatgtttcaacaacaagaagaggacAGAGTGGTGTTTcagc
aacaacaagaagaggggagagtgatgtttcaacaacaagaagaggacAGA
GTGGTGTTTcagcaacaacaagaagaggggagagtgatgtttcaacaaca
agaagaggacAGAGTGGTGTTTcagcaacaacaagaagaggggagagtga
tgtttcaacaacaagaagagggcaGAGTGGTGTTTCAACACTAAGAGGAG
AATTGAATAGTGATTCTCCTATTTCCAATCAATACCGACCCCAACCATTA
ATCGATACAGAGCCCAACTACCAATGGATACCCACCTTAAATATCAATCA
ATACCAACCCCAACTATCAATACCGACCTCAACTATAAATCGGTACAGAC
CCCAACTACCAATCGATACCGACCCCAGCTATCGATTGATACCGACCCCA
ACTACATATCGATACTGACCCTTACTTCCAATAGCTTTTTGCCTGTATTT
GTATCTGATCGATATCGAGTCAAACTTTGctaccaaattttattttaaat
caacACCGACCCTATTACTAAAAGATGATGTCACTACACCAAGCTGATGG
AAAATTCTGGCAGTACCAGTTCTACCTGTACTTCGGGAGCCAGGGGTGGT
ACTGCCAGATTGAATTACCTCAGCTTGCAATACGTGAACAATCAATCGAC
GATTCCAACACCAAGAGGAGGACAGAATGATGtttcttcaacaacaacaa
gatgAGGACAGAGTGATGTTTCAACTACAACAAGAGGAGGGCAGGATGAT
GTTttgacaacaacaacaagaaaaggggagagtgatgtttcaacaacaag
aggAGGGCAGGCTGATGTTTCGACAACAAGAAGAGGGCAGAGTggtgttt
caacaacaagaagaagGCAGAGTGATGTTTGAATAGTGATTCTCTCATTT
CCAATCAATACCGACCCCTACCAATCGATACCAACCCGAAATATCAATCG
ATACCGACCCCGACTACATATCGATATGAACATAACTTCCAATCAATGCC
GACTTTAACTTCCAATCATTGCTGAACCTACCTTCCTATCCTTTcgcata
gtttgcagaggggtatgaacccccctaggtttatgtcatccccccctata
tacccatcccccccttttgtagtgaaatcttatcccccctttttttttac
agaaaatccgtttcgaaggaaactcgctttcccacctaccNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccccccttttttatttg
ccccccccccctacattcccatcccccctagttttttcggcagatctcgg
tacccccctacaaaggccctccaaaaagttggcatccccccctattaaaa
agggggggtgcaaactatgctTTGGCTCCTGTATATGTATCTGATCGATA
TCGACTCAAACTTTgctaccattttattttaaatcgaCACCGACCCTAAT
ACTAAAAGATGATTTCACTATACCAAGCTGATGGAAAATTCTGGCAGCAC
CAGTTCTACCTGTACTTCGGGAGCCAGGGGTGGTACTGCCAGAATGAAGT
AACTCAGCTCGCAATACGTGAACAATCAATCGACGATTCCAACATCAAGA
GGAAGACAGAatgatgtttcaacaacaagaagagtgcagagtgatgtttc
aacaacaagaagagggcaGAGTGACGTTTCAATAACAAGAAGAGGGCAGA
GTGGTGTTTCACTAACAAGAGGAGGGCAGGCTGATGTTTCGACAACAACA
ACGAGATGCGGGCTGAatgatgtttcaacaacaagaagaggtcagagtga
tgtttcaacaacatGAAGAGGGCagagtgatgtttcaacaacatGAAGAG
GGCAGAGTGGTGTTTTAACAACATAAGGAGGGCAGGGTGATGTTTGAATA
GTGATTCTCTCATTTCCAATCAATACCAAACCCAGCCATTAATCGATACC
GAGGCCAACTACCAATCGATACCGACCCGAAATATCAATCGATACTGACC
ATACCTTCCAATCAATACCGACCCTAACTTCCTATAGCTTTTGGCTCTTG
TATATGTATCTGATCGATATCGAATCAATCTTTGCTAccaaattttattc
taaatcaACACCGACCCTAATACTAAAAGATGATGTCACTACTCCAAGCT
GATGGAAAATTCTGGCAGTACCAGTTCTACCTGTANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNGAATGATGtttcttcaacaacaacaagatgAGG
ACagagtgatgtttcaacaacaacaagaggAGGGCAGGATGATGtttcga
caacaacaacaagaagaggagagtgatgtttcaacaacaagagAAGGGCA
GACTGATGTTTCGACAACAAGAAGAGGGCAGAGTGGTGattcaacaacaa
gaagagggcaGAGTGATGTTTCAAAACTAAGAGGAGAATTGAATAGTGAT
TTTCTTATTTCCAATCAATACCGACCCAACCATTAATCGATACAGAGCCC
AACTACCAATCGATACCCACCCCAAATATCAATTGATACCAACCCCAACT
ATCAATCGATATAGAGCCCAACTACCAATCGATACCCACCCCAAATATCA
ATCGATACCGACCCCAACTATAAATCGATACCGACCCCAACTATCAATCG
ATACCGGACagagtgatgtttcaacaacaacaagaggAGGGCAGGatgat
gtttcaacaacaacaacaagaagaggggagagtgatgtttcaacaacaag
aagagtgcagagtgatgtttcaacaacaagaagaggacAGAGTGGTGTTT
CAACAACAATAAGAGGACATAGTGATGTTTGAATAGTGATTCTCTCATTT
CCAATCAATACCGACCCCAGCCATTAATCGATACCGAGGCCAACTACCAA
TCGATACCGACCCGAAATATCAATCGATGCCGACTTTAACTTCCAATCTT
TGCTGAACCTAACTTCCTATCCTTTGGCTCCTGTATCACTCAAACGTACT
GTGATAAACAACGTgtccaaaatcatgaaattaaACGTTTGAAAAACTCT
CATGTGGGTAGGAACTACAGGAAACTGATCGAAAAATCTGATGGTTTTGA
TTTGGATGAAGACGGAGAacaaagtgaaaatgaaaatgggGATGGAGTTG
AAGAGGAAGGAGATGAAAAAGGAGATGAAAAAGGGGATGGAAGTGACgag
gatgaagatgaagaaagaGATCAAAGTAATGAAGAAGAGAAATTAGAGGA
AGGAGATGAAAAAGGGGATGGAGGTGACgaggatgaagatgaaaaaggag
ATCAGAGCAATGAAGAAGAGAAAGTAGAGGAAGGAGATGAAAAAGGAGAT
GGAAGCGACGAGTTTGACGATGAAAAAGCAGATCAAAGTAATGAGGAAGA
GCAAGTAGAGGAAGGAGATGAAAAAGGAGATCAAAGTGACGagtttgaag
atgaaaaaggagATCAAAGTAATGAGGAAGAGCAAGTAGAGGTAGATGAA
AAAGGAGATGGAAGTGACGagtttgaagatgaaaaaggagATCAAAGTAA
TGAGGAAGAACAAGTAGAGGTAGATGAAAAAGGAGATGAAAGTGACGAGG
AAGACCAAGAAGAAGATGAAGCTAGATTTGGCGACTTAATGAATGCGGTG
GTTCTTGATGACAAGGAAGGCTATCACGAACATCGAAGATCCTTTGCTAT
TGATTTGATAAAATCCGTTGTTACAAATATAACTAAGGAATCAATTGACT
TGGTTTTTCCTAGAAACAAAACTCCATCaggcaaaatcaaaaaaatgacC
CAGTTGAATACTCAAGGGAGGAAGTCGCCACACTCTATCATCGAGGAAGA
AAGCGAGGATCCCCAAGATGTAAGTTTTTTTAATGAAGTTGGTTTGGATC
ATTCAACGGCGGAGAGCTTGGCAAACAAGAAACTAACAAAAACCAAATTC
TTCACGAGAGATTTCCATGGAAAGAAAGCTTCTTATATGATAACTCCTGA
ATTTAGGAAAATTCCAATTATTTGTGACCGGAAAACACTCAAGAGAAGAC
GTGGAGGAAACTGGGTCGACATCACTCTAAAACTTATTAAGGAAGCAAAC
CCGTTCTGTTCTTGGAAGTTCACTTACAACCACatcagaaaaaataaaac
aaacaaaaaaaattcaagttaCTGGGTGGCAAAAGCAAAATGTACATTTG
TTGATTGCAATTGTCGTGTTGAAATAACCCAAGAAGATAAAGAATCTCTG
GAGCTTGTTTTCCATTTTATTGGCGACATAAACCACAATGTTACTAAGCC
TAAATCAAGGAAAATTAACGGCGAAGCTCGAAagcaagtaaaatcaaaat
ttttgaaagagcCGAACCACAGTGCTGCCGGGAATTACCGCAAGAGTCTC
GCATCCATTCCAAGTGATGTTTTTGCTTCAGGAAATAGAGACCGTGTGGG
AACTTCCAAAAAAGTTCACCAAAAAATCCGATCAGAAGTTAATATTGAGC
TGAACGGAATCAATAATCTCCACAAAAACCTTTGTGATCTACAGAGGAGA
TTGGCAGAAGATGACAAGTCAATGTCGCAAAAGTTAGACCTGAAATTCAG
AAAGATATTTGGATTCATTCAACGATTCATTGTAACTGATACTGAATTCA
AATTGGTTATGTTTGAAGAGAAGCATGTCAGATTGTACCATAATACTGCA
AAACGAGATATTATCTACCTAGACGCAACCGGAGGAatcgttaaaaaaat
caaagctttcaagaaaatctttatGTATGCATTGACAATGCGGCATCCTT
TCGGGAAAACAGTTGCACTGCCTGCCCTGAGTTATCTCACATCAAGCCAT
TCCATGGAGTCTGTAAGGTTTTCCTTAATGGCACTCAGGGAAAACGAGAG
GCAAGTTTTTGGCGAATGCTCCCAACCCAAATTAGTCATATTGGATAATA
GTAAAGTTCTCCAAGGGGCTATTCTACGAGAATTCAACAATGAGTCCATA
ACAGATTATGTAAACAGAGTATTTGACACATTAACGCTATCGAGTAGTCA
ACGGTCAACTCTCACAAAGATACTAACAGATATCTTTTCGTGCAGTGGTC
ACCTGTTGAAACAGGTAAAAAGAGCTGTCTCGAAAAAGTGCGCGACAATC
AAAGATTTCATTCTTTTCAGTATTGGAAGGATGATTGTGTGCGAAAAATT
GGAGGAATTGACTACAATCATCACTTTGTTTTCATCGATTCTCACAACAA
GGTTCTCCAGTGATGGTCTTCGTGATGCTGTCAAAATGATGGAAAATTAC
ATCAACCAATTTGATGGTCACGATTTGGTTGAAGATGTACTGTCAGACCA
AAATGATAAGGATGATGAGTTGGAAAGTGAGGAggacgatgatgatgatg
aagaagaagatgttGAAAAAGATCATGGAGAAGTTGAAGAAAAAGATGGT
aacgaaaagaaaacaaaggCGAATGCAAAGACagaaaagacaaagacaaa
aaagaagaaaaaagaaaacaaatggaCAACTTATTGGACTGACCAGATTG
ACAAATCAAGACGTAAATATGAATGGGTGGGGGAAGATATAAATGAAGCA
CCAATCAATGAATACTATTCTCCAACCTTTTNaattttgcacacacaccc
ttgagaataaactctattggcttccaatagtttccaattccaaagataac
cgctctcccccacaggagcccaacttgtcatttggGCTNCATTTGTTGAT
TGCAATTGTCGTGTTGAAATAACCCAAGAAGATAAAGAATCTCTGGAGCT
TGTTTTCCATTTTATTGGCGACATAAACCACGATGTTACTAAGCCTAAAT
CGACGAAAATTAACGGCGAAGCTCGAAagcaagtaaaatcaaaattaagt
tAAGCCTCTTGGCACTATTTCAGAGGGCAATTAAGAACTGAAGGGTGCAT
AAGTTGTATAATTTGATTAAATATTAGTCTTATTTTTCCTAATGTTACTA
CTAATTTACATAAAAAtgacttccaatagtttccaattccaaagataact
gctctcccccacaggagcccaacttgtcatttcggccgaaatgaggtttg
acggttacaaatttttagagggagcacgctgcgacggagagcactgaaat
tttgcacacacacccttaagaataaactctattggcttccaatagtttcc
agttctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Ngtttgacggttacaaatttttagagggagcacgctgcgagggagagcgc
tgaaattttgcacacacacccttaagaataaactctattggcttccaata
gtttccagaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNtttaaaaaatgacgtagaaaCAACTGTGAAAACCAATTACAA
AACCTATGTCACAAATTGCTGACTTTTACTTTTAATAACTTGTTCTCACT
TGCTCCCAATAACGACTTACTTTTTATTATGGAAACCAAACAagtgagaa
caagtcataaGTGCTCCGTGTTACTGACAAACTTTACGAAATTGTTAAGA
TCAAATGACATATatactttttaacaacttttttctacatCATTTTTTTG
AAGCCTCTTTGTAGGCGAATATGTCTTTCTtaaaggaattttataacact
tcatggggcagattaaaaagacaatcagaaaacaaaagcttctttgtttt
tcatttctgtatttatggggaagaatgaaattttcagaagatgttttatt
cgatatgaggattcccatttctGTAAAATCGTGATTCCCCATGGTTGCGA
AATGGTGGCTATGgctaattcctttgttctttttctattttcttttgttc
tatgtgaTGTAAAGACACTTCACAAATCaaagtacttccactaactgagT
GGTCACCGGGACGTATTAACAATTGGGCACATAATCGATTTTTTAGCAAT
TGacctttttctgaaaaacagAAATCAAATCCTGTTGGGAAATCTGCATT
AATAACtaaacaattttaaagaaaGTGTAGGACcagaaaatgtcataaaa
aagCATTAGTCTGAACTGGTCTGAATCATACTTAGGGGGGGTAGGTTGTT
GTAAAAATGTCCCCCTAAAAACActtattaaaaatattaaatggaaaaaa
ttgttaTTATTTAAACAGAACCCGTATTTCACTTGGGGATGTTCTGATGA
TCTAGCATTGAGATTGAAGAAAACTCTTTACTGCTCTGAAGATGATGATT
GTTATGACGTTTCATCCATTGCACTAACAGGTAGCAATATTAATCAAATT
CAAATCACTCAATGCAATATCATAGTGATTTTTCATACATGTAAAATATG
TGAACTCTGGAAAAGTAGTAATTCAGAAATTCTAGGAAAGCAGGGACCAT
TATTAGCTCCATTTAACTGGCTCCATTTAACTGGCTCTTGTGGGTGCTTT
CAAATATTACATGAGTAGTGGGGCTCCTGTTTCCTCAACGTTGTCAGAAT
AAAAAATACGGAATCAAAAAGAGTATGATGTTATTTGAACATACTCGTAT
CCTTTAGAATCGTGATATAACTTAAATGTCAAGTCTCTGAAACCCAAGAC
AGGTTTCACTATTTTTTTGTAATGACTTACGTTTCAGATTAATCTATATA
CTCGTGACTAAAGCATTATTTATTCCTCTCGATTTTTCTCAGATGTTGCT
GTATCTATTCTCAAAGAATCAGCAAGATGTTCTAGAAGGAAGATAACACA
TCGCTATGCAAGCTCGTTAACCAGGTAAAATTACATCTTTCTTTGTCTTT
AATCACTTTGATAATGTCCAAAAATAGATATTAGCTTGAAAGTTTATCTT
ATAAGTGAcagtaaatgttttttttaagtttcttaaACTTTCGAAtcctt
tattattattattattttaggCAGCTTTCCATATCACCATGTGCACTTAT
AATGAGCTTGTTGTACTCAGAAAGACTCCGACAATGTAATCCAGGTTATT
TGGACCGTATCTCGTCCTCTGATTTGTATGTCATCTCAATGGTAAGTTTA
AACCCTTTTATTATTGGTGGTAGTGCTAGTGGTTCCTATTAGAAAATTAT
ATAGTggcaaaaaattaggatttaCTCTTAGGGACCTGAAGTAACAAACT
GTTGGCCCTCATTAACAACAGGACGGAATATCAACTAATTGTCAAATACA
ATAAACAGGGATAGTTGGTGGAAAGTTTGCAAAAATTAGCAAATGATAGG
TTGATTATAAGGCACCAGTAATGATGATAATATTTTAATAACAGCTATTA
AAAACACTTGTCACTCTCTCCTCAGTTGGTGGCTACAAAATTTTTACACG
ATGAaggagaacaagaagaaatcTACAATGACGAATGGGCTGAAGCtggt
aattattttttttaattgtaggTTTTCTATTTCCTACCCTAGGCTAAGAT
TTGCACACCTGCTTAGTTCCACCTTAACTGGAATATTTTGAATTGCTTGA
TCACATTTTGTGTCAAACTTAACTTTGAAGAAActaatttttcccttttt
tacaGTTTTCACCAAAACCATATTAAAAATCACTTCCAAGGGGGGGGGTT
TCAAAATATTCTCCATAGATGGGTTGAGAACATCGCTCTTTTACTTTCAG
CTGGACTAGCAGTTTCAACTGTCAACCGTTTGGAAAGAGAATTCCTGGAC
GCCATCGtaagttttcaataaaatatctaattttttaatatttatcgTAT
TAAACCATGTAAATAAATAATCCCGGCGGGTTCTAGGTTCACATTGCCCG
ACCTACCACCCTCGGATACTTAGCAGGACTAAgaaagaggataaatagga
aaAACCTCTAAGAAACTTCGTTGGGAATGAGTTGACATTGCATTACACTT
CGCAAACGAGACACGAGTGGCCAATGACGTGATTTATTAAAAGGATTATT
GTATTTTTGTGTCTGTTGTCtctatattttaattttttttaaggaTTGGA
ATATTTACGTTAAACCGGCCGATTTCCTTGACTATTGCTCGAAAATTGAA
ACCAAGATAGCTTTAAAGTATGGATTGCAACGCGGATGGTTTTCATACAC
CGACCTCGCACAATTCTTACACGCCATACAATACCAGACTGTTTTGAAAG
ACGTCATCGAAAAGACGGTCACTGTAAGTGTTCATTGATTTATCTTCGAA
TCAGTTCGAATGTTTATTTTCGTAACAGCTTTAAAATtccaaaaccttaa
aaattaaaagttgttGAATGTCAAAAGAATCTTGAAGATAAAAAGATCTA
GTTTTAAGGTTATGTAATCGTCGCACATAGTTTGATATTATCTAAAACTA
CtataaaatatcaaatatctcGATAAAGTTATCTAATGAAAAAGTAAACT
CGTAATAATACTCGACTGTATGAGGTGAAATTAATCAAAGAGGatctttt
aaaaaacatgtTTCTGTTTGGTTTAATATAATATTTGCATAAAATTTGCT
AGCCATGACGTAAGTTTAGAATTCCGTAAATTTCataatgttttcaaaac
ttttttttttatttgacaggTCATCTGTGGTTGTGCTTTGGTTTATGGTA
TGTCACTCAGCATTCTCGTTTCCACCGCCCTCACTTACGCCTCTCAAACA
AGCCACCGCATTCAAACGATCACCCAAACATCGACCAATCACACCCGTGT
AAATGATTTCACGCCTTTATCAATGTTGCCTTCTTCAAGCATATTCGCCA
GTTTCTCCGACCGTCGACTGACCCGTAGACGAGGCTTCAGAAGCCATCGC
AAAACAACAGATATGAACGCCAACCAACCCGAAGCAAATCTCGAAGAAAT
AAGCGATCTTGCTCTTGAACGCTTACAGGAAAATGTAACCGCCTCACGCC
CAACACTGCCTTGCACGGCAGATTCCCAAACACACGCCTTACGCTTTGAA
TCGCAACTCCAACACAGGGCACGGCAAACACGGCTTTCAATCACGTTCGA
CTTGACAGATCGCCGATTCATGGCATTCGACGAGGTTGGATATCACgaag
aattttcgaaaaacgtTGCAAAATGTTATGGTTACGCGGCTACAAATGTA
AAGAAGAAGATTGACCCTATTGGAAGCATTTTACGTCGGAACGCAAAGAA
GTTTATGTATGATCCTCGTATCCTAGGAATGACTGTTATTTAATTGATCG
TTTTTCTCACTACTATTTTTTTCACTACAGTATTCTTAATTCAACCTTCC
TATCTCATAACCCAAAATTCACCATTTTATGTGTTTGTTTATTTGAAATT
GCCTGCCTGTTTAGTCCAACAAATCTGTTCTTTTGTACGCATTTTCTTCC
TGTAAACTTAACAACTATGCCATATTAGTACATAGGCTTAGAATTGTGCT
TTGTTTCGATACTGTATAAATGATTTAATCAATATGTAATACATTATCAT
AATACAAGGTGTCCCGGAAAAAAAGCACTATATCAAACCCTGACACAGTA
ATTTTTTCGAGACACACCATATTCTCCGTATTTCtaattttcattaaagc
tcTCTAGTGTTTCTGTTTTTTATGGGTAATATCACTCCCGAAGTAGCCAA
TTCTTTAGACTTAGACCACTATAAACAGCTCCAGGCTCCAAGCTCCAACT
TAGTCTATGAGCACTcttataggcggccactagtgacccccctAACCGGA
AACTTGTGCGGAGCGAAAGaagataaattaaaattttgctcaTCCCTTAT
TAAACATCGTGTCTTTTGAGACCACGTTCACACACTACGGTtctgtttcg
ctccgaaacgaaaagaagtcattctattggttaagTTCAAGTCTTACGTC
AATTCTAACCAATAAAATGGCTTCGTTTCGGAGGGAAACGGAACAGTTAC
GTGCGAACACAGTCTCAGCTTTAGGAAATAAGCAATCATATTATGTACAT
GTCTATGTCGTTTGAAGAAGTTTCCTTAAAATTGAGAATAAAACTTGAAT
TACTACCAAGTCAAGTAAATTCGTTTCTTCAATTTATTCCCCTCCTTTTG
TAGttgtcatttttttgtaaaagattttttacagtaTTGAATATTTGTAG
TATATTAGCTAGCCATGTACCTATACCGTATGGATATAATCACTTTCAAT
AAATGTGTTTATATAGCAATG

Coding sequence (CDS) from alignment at sc0000023:749924..768294+

>TCONS_00002823 ID=TCONS_00002823|Name=TCONS_00002823|organism=Clytia hemisphaerica|type=CDS|length=1308bp|location=Sequence derived from alignment at sc0000023:749924..768294+ (Clytia hemisphaerica)
ATGTTATGGGTaaagttaagaaaaaagaaaaatcaattggAAAGTGCCAA
AATACTCGAGAACCCGTATTTCACTTGGGGATGTTCTGATGATCTAGCAT
TGAGATTGAAGAAAACTCTTTACTGCTCTGAAGATGATGATTGTTATGAC
GTTTCATCCATTGCACTAACAGATGTTGCTGTATCTATTCTCAAAGAATC
AGCAAGATGTTCTAGAAGGAAGATAACACATCGCTATGCAAGCTCGTTAA
CCAGgCAGCTTTCCATATCACCATGTGCACTTATAATGAGCTTGTTGTAC
TCAGAAAGACTCCGACAATGTAATCCAGGTTATTTGGACCGTATCTCGTC
CTCTGATTTGTATGTCATCTCAATGTTGGTGGCTACAAAATTTTTACACG
ATGAaggagaacaagaagaaatcTACAATGACGAATGGGCTGAAGCtgCT
GGACTAGCAGTTTCAACTGTCAACCGTTTGGAAAGAGAATTCCTGGACGC
CATCgaTTGGAATATTTACGTTAAACCGGCCGATTTCCTTGACTATTGCT
CGAAAATTGAAACCAAGATAGCTTTAAAGTATGGATTGCAACGCGGATGG
TTTTCATACACCGACCTCGCACAATTCTTACACGCCATACAATACCAGAC
TGTTTTGAAAGACGTCATCGAAAAGACGGTCACTgTCATCTGTGGTTGTG
CTTTGGTTTATGGTATGTCACTCAGCATTCTCGTTTCCACCGCCCTCACT
TACGCCTCTCAAACAAGCCACCGCATTCAAACGATCACCCAAACATCGAC
CAATCACACCCGTGTAAATGATTTCACGCCTTTATCAATGTTGCCTTCTT
CAAGCATATTCGCCAGTTTCTCCGACCGTCGACTGACCCGTAGACGAGGC
TTCAGAAGCCATCGCAAAACAACAGATATGAACGCCAACCAACCCGAAGC
AAATCTCGAAGAAATAAGCGATCTTGCTCTTGAACGCTTACAGGAAAATG
TAACCGCCTCACGCCCAACACTGCCTTGCACGGCAGATTCCCAAACACAC
GCCTTACGCTTTGAATCGCAACTCCAACACAGGGCACGGCAAACACGGCT
TTCAATCACGTTCGACTTGACAGATCGCCGATTCATGGCATTCGACGAGG
TTGGATATCACgaagaattttcgaaaaacgtTGCAAAATGTTATGGTTAC
GCGGCTACAAATGTAAAGAAGAAGATTGACCCTATTGGAAGCATTTTACG
TCGGAACGCAAAGAAGTTTATGTATGATCCTCGTATCCTAGGAATGACTG
TTATTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001540XLOC_001540Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002823-exon-sc0000023-1491911889:749924..750015TCONS_00002823-exon-sc0000023-1491911889:749924..750015Clytia hemisphaericaexon
TCONS_00002823-exon-sc0000023-1510915933:749924..750015TCONS_00002823-exon-sc0000023-1510915933:749924..750015Clytia hemisphaericaexon
TCONS_00002823-exon-sc0000023-1575043694:749924..750015TCONS_00002823-exon-sc0000023-1575043694:749924..750015Clytia hemisphaericaexon
TCONS_00002823-exon-sc0000023-1491911889:764292..764403TCONS_00002823-exon-sc0000023-1491911889:764292..764403Clytia hemisphaericaexon
TCONS_00002823-exon-sc0000023-1510915933:764292..764403TCONS_00002823-exon-sc0000023-1510915933:764292..764403Clytia hemisphaericaexon
TCONS_00002823-exon-sc0000023-1575043694:764292..764403TCONS_00002823-exon-sc0000023-1575043694:764292..764403Clytia hemisphaericaexon
TCONS_00002823-exon-sc0000023-1491911889:764816..764897TCONS_00002823-exon-sc0000023-1491911889:764816..764897Clytia hemisphaericaexon
TCONS_00002823-exon-sc0000023-1510915933:764816..764897TCONS_00002823-exon-sc0000023-1510915933:764816..764897Clytia hemisphaericaexon
TCONS_00002823-exon-sc0000023-1575043694:764816..764897TCONS_00002823-exon-sc0000023-1575043694:764816..764897Clytia hemisphaericaexon
TCONS_00002823-exon-sc0000023-1491911889:765044..765164TCONS_00002823-exon-sc0000023-1491911889:765044..765164Clytia hemisphaericaexon
TCONS_00002823-exon-sc0000023-1510915933:765044..765164TCONS_00002823-exon-sc0000023-1510915933:765044..765164Clytia hemisphaericaexon
TCONS_00002823-exon-sc0000023-1575043694:765044..765164TCONS_00002823-exon-sc0000023-1575043694:765044..765164Clytia hemisphaericaexon
TCONS_00002823-exon-sc0000023-1491911889:765449..765521TCONS_00002823-exon-sc0000023-1491911889:765449..765521Clytia hemisphaericaexon
TCONS_00002823-exon-sc0000023-1510915933:765449..765521TCONS_00002823-exon-sc0000023-1510915933:765449..765521Clytia hemisphaericaexon
TCONS_00002823-exon-sc0000023-1575043694:765449..765521TCONS_00002823-exon-sc0000023-1575043694:765449..765521Clytia hemisphaericaexon
TCONS_00002823-exon-sc0000023-1491911889:765774..765829TCONS_00002823-exon-sc0000023-1491911889:765774..765829Clytia hemisphaericaexon
TCONS_00002823-exon-sc0000023-1510915933:765774..765829TCONS_00002823-exon-sc0000023-1510915933:765774..765829Clytia hemisphaericaexon
TCONS_00002823-exon-sc0000023-1575043694:765774..765829TCONS_00002823-exon-sc0000023-1575043694:765774..765829Clytia hemisphaericaexon
TCONS_00002823-exon-sc0000023-1491911889:766117..766296TCONS_00002823-exon-sc0000023-1491911889:766117..766296Clytia hemisphaericaexon
TCONS_00002823-exon-sc0000023-1510915933:766117..766296TCONS_00002823-exon-sc0000023-1510915933:766117..766296Clytia hemisphaericaexon
TCONS_00002823-exon-sc0000023-1575043694:766117..766296TCONS_00002823-exon-sc0000023-1575043694:766117..766296Clytia hemisphaericaexon
TCONS_00002823-exon-sc0000023-1491911889:766693..768294TCONS_00002823-exon-sc0000023-1491911889:766693..768294Clytia hemisphaericaexon
TCONS_00002823-exon-sc0000023-1510915933:766693..768294TCONS_00002823-exon-sc0000023-1510915933:766693..768294Clytia hemisphaericaexon
TCONS_00002823-exon-sc0000023-1575043694:766693..768294TCONS_00002823-exon-sc0000023-1575043694:766693..768294Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002823-proteinTCONS_00002823-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000023supercontigsc0000023:749924..768294 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
42.3243	39.5833	31.4844	31.7156	42.0816	31.3353	37.7399	42.0942	39.2098	39.0859	80.0851	64.498	52.6835	63.9143	13.3921	16.1862	22.2384	23.9068	36.1936	32.8217	26.2672	28.179	35.7983	38.7008	98.7762	80.8535	12.5251	16.715	22.0133	22.9798
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
IPR013922Cyclin_PHO80-like
Vocabulary: Biological Process
TermDefinition
GO:0000079regulation of cyclin-dependent protein serine/threonine kinase activity
Vocabulary: Molecular Function
TermDefinition
GO:0019901protein kinase binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity
molecular_function GO:0019901 protein kinase binding
Blast
[Close]
BLAST of TCONS_00002823 vs. Swiss-Prot (Human)
Match: CNPD1 (Protein CNPPD1 OS=Homo sapiens GN=CNPPD1 PE=2 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 2.803e-50
Identity = 87/209 (41.63%), Postives = 139/209 (66.51%), Query Frame = 3 
Query:  126 LALRLKKTLYCSED--DDC-YDVSSIALTDVAVSILKESARCSRRKITHRYASSLTRQLSISPCALIMSLLYSERLRQCNPGYLDRISSSDLYVISMLVATKFLHDEGEQEEIYNDEWAEAAGLAVSTVNRLEREFLDAIDWNIYVKPADFLDYCSKIETKIALKYGLQRGWFSYTDLAQFLHAIQYQTVLKDVIEKTVTVICGCALVY 743
            L+ R+++ LY   D   DC  +  S  + D+AV +L+++A    R++  +Y + ++R+  ISPCA++++L+Y ERLR  NP YL  +SSSDL++ISM+VA+K+L+DEGE+EE++NDEW  A G+AV T+N LER FL A+DW++Y  P +  +  S +E+ +A + G  RGW++YTDL   L    +Q  L  + ++ V + C  A+ Y
Sbjct:   31 LSARIRRRLYYGWDWEADCSLEELSSPVADIAVELLQKAAPSPIRRLQKKYVAHVSREACISPCAMMLALVYIERLRHRNPDYLQHVSSSDLFLISMMVASKYLYDEGEEEEVFNDEWGAAGGVAVPTLNALERGFLSAMDWHLYTDPREIFEVLSWLESCVAEQQGRWRGWYTYTDLCVLLEQPTWQLALGSLCQRLVKLSCLLAVAY 239
The following BLAST results are available for this feature:
BLAST of TCONS_00002823 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CNPD12.803e-5041.63Protein CNPPD1 OS=Homo sapiens GN=CNPPD1 PE=2 SV=2[more]
back to top