TCONS_00003020 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003020
Unique NameTCONS_00003020
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1033

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003020 ID=TCONS_00003020|Name=TCONS_00003020|organism=Clytia hemisphaerica|type=transcript|length=1033bp
GTCGGATTTTTCATCGTGAAACGTTCAGAAATGATACTTTGAATTTTATC
AATGACTTAATCAATCAAAAAGATTTCAGTTGTAACCATGCCATAGTTGT
TACATATGAGAATATGCCTGAGTTTGGTGTTTACACATCAAGGAATAGCT
TCCAAATCGTGCTAGCGTCAGATGGGAAAGTTACCTACGGTCTAGCTCTC
TATTACCGCGTAGACTCTTATGATCGCGCTATGGTTGGCTATGGAGAAGC
AACATGTAACACAGGCATTAAGGTTGCACCTCCATCTCAACAACAATTGG
ACGAGTTTGGACATCGAGTGAACACAAAGATATTCTTATTGACAAATTCA
GTATGTAAAGCCAAAATTGACAGCTATTTATATTCATATGGCGAATCAGT
TGGTGATCAACTTCTGCCGTATGATAGCTTGAACCCAGTTCGTGAATTAG
TTGTGGAAGATCCTTTCCAATATTTTGATAAGGATGTGCACAAAATATAT
ATCAGCAAGTATGGTTTTATATCATTACACGAACCCGCTCAACATTCACT
CGTGTGGTTCCCGTATAAATACACTTCAATTATATACGGATATCTTACGC
TTCTACCCGGTAATGTTTACTACCGGCAAACAAATGATACAGCGGAAATC
AATGTGTTGTTGGAGAATCTGATTGAAATGAACTTGCGAACAACTTTTGA
CAGTGTTATTATTATAACATATCATACAGAATCTCGAAATGATCCTGAAG
ATTCTCACTTGCGTACCAACaactttcaaattattttggCAAATCGTCCA
GGAAGTCCTGTCTATATTCGATTCATATATCGTCGTTTGGACTATATATT
TGGAATATCAGGATTCAGCGTTCCAGGTTGTTACCAAGGTCAGATTGTGG
ACCCGAGAGCTTCTCATTActtgacagttacatcaaatggtgaaagacat
tatttcgGATGGTCAAACTGTAATACTAAACATACAGcATTTTTACCAAA
CGGAGCTGTTTGTGGGGACTTGTTTAATTCAAA
Run BLAST on NCBI

protein sequence of TCONS_00003020-protein

>TCONS_00003020-protein ID=TCONS_00003020-protein|Name=TCONS_00003020-protein|organism=Clytia hemisphaerica|type=polypeptide|length=343bp
RIFHRETFRNDTLNFINDLINQKDFSCNHAIVVTYENMPEFGVYTSRNSF
QIVLASDGKVTYGLALYYRVDSYDRAMVGYGEATCNTGIKVAPPSQQQLD
EFGHRVNTKIFLLTNSVCKAKIDSYLYSYGESVGDQLLPYDSLNPVRELV
VEDPFQYFDKDVHKIYISKYGFISLHEPAQHSLVWFPYKYTSIIYGYLTL
LPGNVYYRQTNDTAEINVLLENLIEMNLRTTFDSVIIITYHTESRNDPED
SHLRTNNFQIILANRPGSPVYIRFIYRRLDYIFGISGFSVPGCYQGQIVD
PRASHYLTVTSNGERHYFGWSNCNTKHTAFLPNGAVCGDLFNS
Run BLAST on NCBI

transcript from alignment at sc0000024:822941..831497-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003020 ID=TCONS_00003020|Name=TCONS_00003020|organism=Clytia hemisphaerica|type=transcript|length=8557bp|location=Sequence derived from alignment at sc0000024:822941..831497- (Clytia hemisphaerica)
GTCGGATTTTTCATCGTGAAACGTTCAGAAATGATACTTTGAATTTTATC
AATGACTTAATCAATCAAAAAGGTTAGTTTCGTGAGTTTCCTAATAATTT
GTGTAAAGTCTCTTTCAATATAATCTGCAGCGGGACAATAAAATCTGTAA
CTATTGATATAATTGGATTTCCTAGCTTAACCGTGTCGGAAGAAAATTTC
TACATCCATTGTTAGATAACCAGCTACTTTTCGTCAGGTTGTGGGTTCGA
TCCCCAGCCAGTTCATATCAAAGATCACCAAATTTTGTACTTGAAGCCTC
GCTGTTTGAAGCTCCGAAATCAGATGCCATATACAGCCTAGAAACTTAAA
TGAGTAAATTTGCAACAGCGTAATGTTTTGTATTTATCAGTTAGATTTTA
CTGTATAATACGTAAATTTTATTTATGGACAGCCCAGTCGTTCAATCTTT
TTCATGGAATCAACCGCCTGCTCGGCTCTGCTCGTTTATTTTTTTCATAA
GAACAAACTATATAGCATGAATTTTTGGTGGCTTCAGAAGGCTTCAAAAT
TGTTGGGTATAAAAGACGTGTTTACAGTTGACTCTCTCTAATTCGATCTT
CAAGGGGATGAAAACTTTTATTCAAATTAGAGATAGATTCGAATTACATA
GAGTAACTTAAGCCACTATCCAGCTAAGGGACCAATATTTTTGTTCGAAT
TACAGAAAGATTGGAATAATAGAGATTCGAATTACAGAGAGTTGACTGTA
TTAGGCAATACATACCCTGAGTATCAGAGGTTAAGTTTTCAAAGAATATA
TTAACCTCTGAAGACCAATAATATAAATTTCATCGCGCATGTGTCAATCT
AATCACTGTAGAGATGAAGAGCAAATATTACGATATTAATGTCTAGCAGA
TTGTATCAGTATACATGTTTACAATTGACGAATTCCCCAGAAACTTCCAA
GTGTAGTTGAAATGATTTTCTCTCAAAAGAAATCTTCTATATGATTCTCA
AATGTATAACAGTAATTATTAGATTATTAATTATGGTAATATTACTTCAA
TGGAATCGAAATAATAGAGAAATCTTGTGTTATGATTCTCTATCACTGAC
TTTTTTTAAAAAGCATTGATGACATTTTTAAGTTGTGTTTTCAACGACGG
GAATAAAAATATCGACTATGACCCTCATCCAAGATCTTGGATGGTCGTCA
TGGTTACTTTTCTCTGCGTTGATTGCGCGCTGAATAGAATCTCGATTGGT
CGACACAGGTCAATATATGATTTTGGCCTGTGCTTTTCAGTAGGCAATAC
ATGGAAAGAAATGGGAAAGAATCAAACTGAAATTATTTTCCTTGTTTGTC
ACCTTCTTATCCTTTGTAATTTTCATGTTCGTTTCTAGATTTCAGTTGTA
ACCATGCCATAGTTGTTACATATGAGAATATGCCTGAGTTTGGTGTTTAC
ACATCAAGGAATAGCTTCCAAATCGTGCTAGCGTCAGATGGGAAAGTTAC
CTACGGTCTAGCTCTCTATTACCGCGTAGACTCTTATGATCGCGCTATGG
TTGGCTATGGAGAAGCAACATGTAACACAGGCATTAAGGTAATATATATA
GTGGTTGTTACTCCCATCCCGGTAGAAGCTTTACATTTCTTAACGTCAGT
CACTGTGGCAAAGAAGACTTACAAAAACCGATTTACTTTTTCTAATGCAT
GATATTTTTTATCCTTTTTTAATCCAAATGTTTTTGAAATAAGGTTTACG
AGCAGCCTAACTTCTTGGATACGATAGAATGAATATAATAACAAAAATGA
AGAACATTGACGAAATCTTATCTTGCCAATACCATCCGTCATGTTGCATG
AAGAAAACAACCAATTTGTTTTGGAGACCTTCTTTACGACAACATTCTTC
AAATCTTTACTGCATATCAATTTGGGCTATAAGAGACTTTTTAACCGATG
ATTTCCAAAGCAATGTCTGACGAAAAATCCTCGACTATTTAGTAATCTTT
CTAGCCCTTTCTAAAGTTTTGGCAGTTTTCTAATAAAATAACATGTTATT
GACGTACCAAATCGTTTCTCGCCAGGTTGCACCTCCATCTCAACAACAAT
TGGACGAGTTTGGACATCGAGTGAACACAAAGATATTCTTATTGACAAAT
TCAGTATGTAAAGCCAAAATTGACAGTAAGTCTATAACATTTTGAAGATC
TTTTAATACACATTTAAGCGGCTCCCAGCAGAGTCTCTGACCATACAAAC
AACTTACCCGTCTGGCACGCAACGTCAATCTAATGTTCACAACGTCCATT
TAACATTAGATGAACGTACCAGAGTAACTTCAAGAAATTGAGTAACTTAC
AGTCTCGGGGAAGGGGAAGGGGGAGGGAGTCACTCGATTTAAAAAAGACA
TTAAAAATTAGGCATGTACAGTGCAGAGAAAATTAAGCCAAATTCGAGTA
AATTTAGGCGGAAAATCGACTCTTACGGCGCATTTCTTGAACATTTTTCT
GTCTATTTTAAGACGCTTTACTCCCTATTAAATCCTTAGAGTGCACTTTC
TCTCATTTTAGCAATTACCGTATACTTTAATTGAAAAGCCTGAAAATATA
CCCCTAAAGGTCACACCTATGGTAGGTCGCTTAACTTAAGTGCCTCCCCC
ATGATGCATTCGGATGATGCTTGAACAAAACCAATTTAGTACATACCCAT
CATTACCCTGAGTATCAGAGGTTAAGTTTTCAAAGAATATATTAACCTCT
GAAGACCAATAATAGAAATTTTATCGCGCATGTGTCAATCTAATCACTGT
ANAACCCATCCGGCTCCCAGGCACCTGTATAGAAAATAGCATCTTGGCGT
CTCAAAGTTAGTCCAGTGGTAGGAAATCTGCATAAGGTGCAAAGGGATGA
TGGTTCAACGCCATGAAGAGAAGGCTTTGTAGAGCTTTGTTAGATTTTCG
AAAACTTTTTACAAAACGTTGTAAATTGTAAAAAACGTATGCGCAACGTC
GCACGCTGCAAATTCCCCAGAAACCTCCAAGTGTAATTGAAATGAGTTTC
TTTCAAAAGAAATCTTCTACCTGATTCCCAAATGTATAACAGTAATTACT
AAACTATTAATTATGGAAATGTCACTTTTAATTGAATCGAAATAATAGAC
AGACTTTATGGCCGTGTTCAGACCTAGGTTTAAAGTAATTATGTCCGCAT
GCCTCTTTTATATTCCTTTTGTNTATCGTAACATAGGCCGTGTTCAGACC
TAGGTTTAAAGTAATTATGTCCACATGCCTCTTTTATATTCCTTTTGTAT
TTAACTGCACGCTCCTCATTAGTTAAACCAAAGTTTAAAAAGGAATCACC
CTCTGGTTTAAAAAAAAAGTTTTNNNNNNNNNNNNNNNNNNNGTCAATAT
ATGATTTTGACCTGTGCTTTTCACGGTAACACATCATTGATTGGAATACG
TTATTTTGAATCATCCGAATGCATCATTCTCGCCTAGCCGCAGCTTAATT
CACATTATAGTTAAGTCTCCATAACTAGAAAACAAAAATGGGGAGCAACA
ATTTGCTCGAGTTAATGTTGAGTTAGTAAGGTTTATAAAGCATTGTTAAC
TAGAGGGTCCACAAAGTTCGAGTTAAGGAAATATTCAAGTTATAGAGGTC
ATGATATGAGCCCTTCCCATAGAGGAATAGGTCCTACTCCTTGCGAAGTA
GGAATTCCTCCTTTTTCAAGGCGGAGTGCATAGCGCTGTTCAGACACCAA
TGGTGTAGTTCGTCGCAAGCGCAGGTCGGAAGGTCTGAGTCAAAGAAACT
CCACTCCAATAAACTTAACGCTTATAAAAAGCAAACTTTTAATTTATTTT
CCAGGCTATTTATATTCATATGGCGAATCAGTTGGTGATCAACTTCTGCC
GTATGATAGCTTGAACCCAGTTCGTGAATTAGTTGTGGAAGATCCTTTCC
AATATTTTGATAAGGATGTGCACAAAATATATGCAAGTATTTTCATCATT
TTAATACACCTTTTCGACCGTAGCCACCAATTGCCACGCGGGCGTTTTTT
GTCCACTTTACCACCCTAAGAACCGTCCCAGTCTTTTTTTCGCACCTAAA
GACAATAGAAAAAAGTGTAAGAAAAGGATTGGATCGGGTTTATAAGGTGG
TAAATTAAATAGTAAAGTAGCACGCGCTTGACCGTGCGACTACGGTCGAA
AAGGTGTCTTGCTTTTTATTAAATGGCATAATTTAACGTATCTATCCTGC
CATTTGCTTAAACAGCATTTATACTTTTTCCCCTTTCAGTGGCGCGCAAG
CATAAATTTTGTGAAATTCTTTTGTTGGTTCTGCTTTGTAAACATATCAT
TGAATGATCCGGAGCTTCTTCTACCAGAGCAACGAGTTTCTATCAGAGGC
TTCCATTTCCCGTTCGGTTCATAGATAACTGTGGGTCCCGTTAACAATCC
AAGAAACCCTAAAGTATCTAAATACACCCCTGTCTCACAGACCCGCTGGG
ACCCTAGTCGCACTAGAAAATTTGGCAAAATTTTTGTCCCCGGTGAGAAA
ATACCCTGGAATTTCAACTGAGAAATTGACTTTGATTTCATCTCCAATCG
AAATTTAATGTTAAAAAATTGCACTCCAAAACCACGCCACTGGATTTTTG
AACCTTGGGACAATAAAATTGCTTTCCCATTGGGATTTCAATAGGAACTT
ACTTTTATCCCCCCGAATAAAAAAGTTCCACCGGGGCTATGGGACAGTGG
TGTTTAAATTACTGATCTATCCATATAAAAAATATTACTCCCTCTTGTCC
GTGTCTGTGTATTTGCATTGGTATTTATATCAATTATGCCTTCTGAAAAA
ACAACGTTATAAATGGAAATTTCATTGTAATGCAAGGTCAAAACTCAATC
ATGCAGGTCACCTTCTTTAAAAAATTACAGAAAAATGCTTACGCAGCTAA
AAAACATATCTCATCATCCTTGAAGTTCAATATCTCGACAAGCAGACAAT
TGGCACATAGCAAGCAATACCATTTTCTGATAGAATTCTTTCAGAGCTAT
ATAAAAATACCATCTAATGATCAAAAAAAGTTTTGGCTTCAGCAAAAATG
CTTAAAAAGGGCCATATCGTTGGTCCAGATGGTCCAACCAAACAAACAAC
CCCGCATTATTTCATCGGCTCAACAAACTGAATCTTGTAAAGAGACCCTT
AACGACGTAATTTTGCCCATTGTGACCCATCATTCCATATGATTGGAGTT
TGCTAACACCAAAAATTCAATTCTCACATAACATTCGGAAACATTTTGCG
TACAATTTTTCCGGTAAGCTAATTTTGACCCTCGATATATAAAACGTTCT
TGATTGGTTTGGCTGTAAGGAAGGTTTTGTCGGGGGACGGCAGCGTAGAA
AAGTGGCTTCATAAAATCTGTCGCTTAGAAAGGTCCATTTCATTAAGTTT
AAAGCCCGAAGGGCTGGAGTAGAAACTCTAATCTTTCCCATGCAAGAAAA
CATGAAGCCACTTATTTCCCATCCAGATCGCGCCTAGAATGCGCCGCAAT
CACGACGACGAATTGTATCTAGGAGTTCCTTTGTTTTTGAGGATTGTTTT
AATCTAATGATAGATTTTACTTTCAATCCGGCGTTTGTGTAAAAACCACG
CAGAGGCGTTCTGGATGAGAAATAAGTGGCTGGTGTCGAGTCTAGCCCTT
CGAACTTGGAAGTCAATGGTCCATTCCTGACAATTTATTTAACTGTTTAA
ATAATTATAGATCAGCAAGTATGGTTTTATATCATTACACGAACCCGCTC
AACATTCACTCGTGTGGTTCCCGTATAAATACACTTCAATTATATACGGA
TATCTTACGCTTCTACCCGGTAATGTTTACTACCGGCAAACAAATGATAC
AGCGGAAATCAATGTGTTGTTGGAGAATCTGATTGAAATGAACTTGCGAA
CAACTTTTGACAGTGTTATTATTATAACGTAAGTGTTTGTCAAACAGATT
ACGATTTAACTTAAGAGAAGAAATTTTGGTACTACAGTTTTTTATCATGG
CATATTTCTATCGAAACAAAAGTCTCAATTTTCAACTATCCGGAAAAGTG
AAATGCAGGAAGTGGAATCTTATAAAAAACGACAGTACAACCATAAAATT
TTTCTTTCCATTTTACAGATTGATATTTAAATTCTTCTAGATATCATACA
GAATCTCGAAATGATCCTGAAGATTCTCACTTGCGTACCAACAACTTTCA
AATTATTTTGGCAAATCGTCCAGGAAGTCCTGTCTATATTCGATTCATGT
ATGAACATTTTCATGACTTTTTTTCATTTTTCAAATTTTCCAATTAACCC
GGTCAAAAAAAGAATATTAACAAAAGAAAATCTGTCCTCCATTAATTTTA
AGTTTCTTTTGTAACCGCTGCTGGCGTCGGTATTTCGTTCTTTGCTACCC
CGCATGTCCCCATTAAATTTCGCAATCGCCTATACAAGATTAGCCTATAC
TAGACGTCACCGCTTTTCCGTACGCAGTAAGATATTTTCTACTTTTACGA
CTTTTTCGAATGTTTCGGGCCAAGTTTTTTGGGTTCTAAACATTCGATAT
TTTGACGTCATTTTAAAGTTTTGAAGCTATTTTAACGTCTTCTAACATTA
CATCACGGAGACAACAGCTGATTGGTTGCAAGTGACGTATTAACTGACTT
TACGTCACTTTACAACAAAACTTGCTGTTGGGTCTATGGTGTGATGTCAA
AAACATTGTAGTGATGTATATCATGAATATAGAGCATGATCATAACATGT
GATCAAAAAATAGTATGGTGGGATAGAGAAATGCTAATTTCACAAGTATA
TTTTAAAATTGTACACTTGTTTCCCCACTCAGATATCGTCGTTTGGACTA
TATATTTGGAATATCAGGATTCAGCGTTCCAGGTTGTTACCAAGGTCAGA
TTGTGGACCCGAGAGCTTCTCATTACTTGACAGTTACATCAAATGGTGAA
AGACATTATTTCGGATGGTCAAACTGTAATACTAAACATACAGGTATAAC
AATACACTTTTCTCGAGATGCATAAATTTATTGTTGTCCTCGTTTTCAAA
CAGATTTCATTGCTATGAAATTATAAAGTACTTGAAATTCAAAATGTCTG
ATGAGGTGTAAACAACACAATTATCATTGTGAACATGTAATTTTATAGCA
ATGAAATCTGTTTGAAAACGAGGACAACAATAAATTTATGCATCTCGAGA
AGAGTGTATTTCGTTGTTCCTATGAGAAAAGGTTCGATCTCAAATCAAGT
GTCTTGATAATGTTATAATTTTGCACTCCTATTCTTTATGTGAGATTGGC
CTTTTTTGTTCTATGGAAATATTGACTATTGCTCCGTATGTGCCTAATCT
CAATATCAAAGATAAAAGTCACAGTTAAACTATTGATTTTGCAAGGCACT
CATTTTCAGATTGAACTATTGGTCATGTAAACATCTAATTAGACTATGCT
ATATAATCTAAAACAAATCACTATCTAAGAAATAAGCCTACAGCCGAAGA
AAATTCTCAAACGGATTTTAACCTTGCCAGTCTTTTTTTTCTTCGCTTCT
TTGAAACTCTCCCGCCGATTATTTTCCCGTCTACCACCATAGCGGCTGTG
AACACCGCGCATAATATGATTTTTCCACTTTTACCACCCCTGTAACGAAC
GGTAACATCATGTAGTAAAACAATTAAACCTGTGCTACACTTTCTTTATA
TAACAACCCTTTCTCACAGACCCGGTAGGATTTTTTCAGCCAGTGTGAGT
AAAAATAACAGACCAAAAGTAGATGGGGATTGATATTCCCATGTTTTTTA
TGACTGTGGATTTGGATTCAATTGTTTTAGAGCCAGAAAATTCAGTGGGG
ATGACAAAATAGCACAATATTTTGCAGTGAGGATTTACTTTTTGATTATT
TTCAGTGGGGAAGAATTTAGAGAATAATTTTCCACTGGGGACGATATCTT
GGCTAATCTTTCCTGTGGGAAAGGGTGGTATATAAAAGCAAACTATTTAA
AAACCTAAGACTTAAAAAAATTACTCTTCTCCTTGCTAGTTGCCCATTTT
GGGAGCATAAATTTCCATACCAAGGGGGGGATGGACCAACCGTTTCACTT
CGAAAAAAGATTCTTAGAAACGTGTGCACACCCTGTGGAAAAAAACAAAA
TTCGCAAAAGAACCCTTGGAAGAATTGTTTTCATAACTTAAAGTAAGGGT
AGACGAACTGAAATCAGTTTTTTGCCCCCCCCCCCCCCCAATTTTTTTAA
AAAATTAAAAAAGGGGTGAACGAACTAAAACCAGTTTTTTTCCCCCCCCC
CCCCTAAATATTTTAGAATAACTTTTTTCCCCTGGAAAATGGTCCTGCTT
AACTTTAATGTTATCTCTATCACAAACTCAACTTTGTGCAACGTTAATAT
TTTTTTCCTGCACTGTAAAACATCTGATATAGACTTAGACTCCTACTTTT
TCACTTTTCAGCATTTTTACCAAACGGAGCTGTTTGTGGGGACTTGTTTA
ATTCAAA

Coding sequence (CDS) from alignment at sc0000024:822941..831497-

>TCONS_00003020 ID=TCONS_00003020|Name=TCONS_00003020|organism=Clytia hemisphaerica|type=CDS|length=1029bp|location=Sequence derived from alignment at sc0000024:822941..831497- (Clytia hemisphaerica)
CGGATTTTTCATCGTGAAACGTTCAGAAATGATACTTTGAATTTTATCAA
TGACTTAATCAATCAAAAAGATTTCAGTTGTAACCATGCCATAGTTGTTA
CATATGAGAATATGCCTGAGTTTGGTGTTTACACATCAAGGAATAGCTTC
CAAATCGTGCTAGCGTCAGATGGGAAAGTTACCTACGGTCTAGCTCTCTA
TTACCGCGTAGACTCTTATGATCGCGCTATGGTTGGCTATGGAGAAGCAA
CATGTAACACAGGCATTAAGGTTGCACCTCCATCTCAACAACAATTGGAC
GAGTTTGGACATCGAGTGAACACAAAGATATTCTTATTGACAAATTCAGT
ATGTAAAGCCAAAATTGACAGCTATTTATATTCATATGGCGAATCAGTTG
GTGATCAACTTCTGCCGTATGATAGCTTGAACCCAGTTCGTGAATTAGTT
GTGGAAGATCCTTTCCAATATTTTGATAAGGATGTGCACAAAATATATAT
CAGCAAGTATGGTTTTATATCATTACACGAACCCGCTCAACATTCACTCG
TGTGGTTCCCGTATAAATACACTTCAATTATATACGGATATCTTACGCTT
CTACCCGGTAATGTTTACTACCGGCAAACAAATGATACAGCGGAAATCAA
TGTGTTGTTGGAGAATCTGATTGAAATGAACTTGCGAACAACTTTTGACA
GTGTTATTATTATAACATATCATACAGAATCTCGAAATGATCCTGAAGAT
TCTCACTTGCGTACCAACAACTTTCAAATTATTTTGGCAAATCGTCCAGG
AAGTCCTGTCTATATTCGATTCATATATCGTCGTTTGGACTATATATTTG
GAATATCAGGATTCAGCGTTCCAGGTTGTTACCAAGGTCAGATTGTGGAC
CCGAGAGCTTCTCATTACTTGACAGTTACATCAAATGGTGAAAGACATTA
TTTCGGATGGTCAAACTGTAATACTAAACATACAGCATTTTTACCAAACG
GAGCTGTTTGTGGGGACTTGTTTAATTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001652XLOC_001652Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003020-exon-sc0000024-1575043694:831426..831497TCONS_00003020-exon-sc0000024-1575043694:831426..831497Clytia hemisphaericaexon
TCONS_00003020-exon-sc0000024-1575043694:829910..830109TCONS_00003020-exon-sc0000024-1575043694:829910..830109Clytia hemisphaericaexon
TCONS_00003020-exon-sc0000024-1575043694:829323..829422TCONS_00003020-exon-sc0000024-1575043694:829323..829422Clytia hemisphaericaexon
TCONS_00003020-exon-sc0000024-1575043694:827516..827643TCONS_00003020-exon-sc0000024-1575043694:827516..827643Clytia hemisphaericaexon
TCONS_00003020-exon-sc0000024-1575043694:825520..825737TCONS_00003020-exon-sc0000024-1575043694:825520..825737Clytia hemisphaericaexon
TCONS_00003020-exon-sc0000024-1575043694:825200..825307TCONS_00003020-exon-sc0000024-1575043694:825200..825307Clytia hemisphaericaexon
TCONS_00003020-exon-sc0000024-1575043694:824455..824615TCONS_00003020-exon-sc0000024-1575043694:824455..824615Clytia hemisphaericaexon
TCONS_00003020-exon-sc0000024-1575043694:822941..822986TCONS_00003020-exon-sc0000024-1575043694:822941..822986Clytia hemisphaericaexon
TCONS_00003020-exon-sc0000024-1510915933:831426..831497TCONS_00003020-exon-sc0000024-1510915933:831426..831497Clytia hemisphaericaexon
TCONS_00003020-exon-sc0000024-1510915933:829910..830109TCONS_00003020-exon-sc0000024-1510915933:829910..830109Clytia hemisphaericaexon
TCONS_00003020-exon-sc0000024-1510915933:829323..829422TCONS_00003020-exon-sc0000024-1510915933:829323..829422Clytia hemisphaericaexon
TCONS_00003020-exon-sc0000024-1510915933:827516..827643TCONS_00003020-exon-sc0000024-1510915933:827516..827643Clytia hemisphaericaexon
TCONS_00003020-exon-sc0000024-1510915933:825520..825737TCONS_00003020-exon-sc0000024-1510915933:825520..825737Clytia hemisphaericaexon
TCONS_00003020-exon-sc0000024-1510915933:825200..825307TCONS_00003020-exon-sc0000024-1510915933:825200..825307Clytia hemisphaericaexon
TCONS_00003020-exon-sc0000024-1510915933:824455..824615TCONS_00003020-exon-sc0000024-1510915933:824455..824615Clytia hemisphaericaexon
TCONS_00003020-exon-sc0000024-1510915933:822941..822986TCONS_00003020-exon-sc0000024-1510915933:822941..822986Clytia hemisphaericaexon
TCONS_00003020-exon-sc0000024-1491911889:831426..831497TCONS_00003020-exon-sc0000024-1491911889:831426..831497Clytia hemisphaericaexon
TCONS_00003020-exon-sc0000024-1491911889:829910..830109TCONS_00003020-exon-sc0000024-1491911889:829910..830109Clytia hemisphaericaexon
TCONS_00003020-exon-sc0000024-1491911889:829323..829422TCONS_00003020-exon-sc0000024-1491911889:829323..829422Clytia hemisphaericaexon
TCONS_00003020-exon-sc0000024-1491911889:827516..827643TCONS_00003020-exon-sc0000024-1491911889:827516..827643Clytia hemisphaericaexon
TCONS_00003020-exon-sc0000024-1491911889:825520..825737TCONS_00003020-exon-sc0000024-1491911889:825520..825737Clytia hemisphaericaexon
TCONS_00003020-exon-sc0000024-1491911889:825200..825307TCONS_00003020-exon-sc0000024-1491911889:825200..825307Clytia hemisphaericaexon
TCONS_00003020-exon-sc0000024-1491911889:824455..824615TCONS_00003020-exon-sc0000024-1491911889:824455..824615Clytia hemisphaericaexon
TCONS_00003020-exon-sc0000024-1491911889:822941..822986TCONS_00003020-exon-sc0000024-1491911889:822941..822986Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003020-proteinTCONS_00003020-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000024supercontigsc0000024:822941..831497 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.0974993	0	0.0580628	0	0.422336	0	0	0	0	0.258073	0	0	0	0	0	0.463801	0	0.0957878	0.666056	0.464757	0.493666	1.2118	0.705383	0.536332	0	0	0.525671	0.243443
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003020 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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