TCONS_00003085 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003085
Unique NameTCONS_00003085
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2585

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003085 ID=TCONS_00003085|Name=TCONS_00003085|organism=Clytia hemisphaerica|type=transcript|length=2585bp
TAGACAGTATGTAAACTAAGAAGTATACCAGAATAATCGAAAATAAACTC
ACTAAAAAGACGGTCAACCGAGATGCATACTTGTTCCTCAGCAGCAATCA
TCATAGTCGCCTTCGTTGCTGGGTTTGTGACATCACAGTCCCTCTTGATC
CCGAAACAGGTCGACCGTATGAAGGCTGGAGATGTGTTTCAGCCCAACCC
TGGAAAGAAGTGTACAGATATACGGAACGCCGAGAATCACTCATCAATCA
ATACGAACGTATGCAAATGTAAGAGTGGAACAAACACattgtattttgat
tttaataatgAAGATTCTTGTTATGCAAGCAGCGACACGGTTGGTCAAAC
AACCATGTTTTTCCAAGGAACGAACGGTCAAGTCGCTTTAGTTGGTTGGG
ATAATACAAACAAACAATGGAATTTCGTACAAAGACCTATTATACATGAA
AATGGAACTTTGTTCGATTTCCAATCTTGCTCACAGAGAATTGAGCTTGA
ACTTTGGGAATATACTAATTACAATTTCAGTTACACTAAGTTCAACGACG
ATATTTTCAAACCAGCAGTACCGGACAGGAAATTTACTTTCGAAttttca
gccagtggacaaaacaaaaaagataaaagtgTACTTCAAGGAAGGCTGTT
CGATATATCATGGAGTTGTGATAAGTCTggagagaaatattttacgagtg
tCAAATTCGCTGGAAGAGAAGAGTATTATTTTGGAAAAACTCCTCCATCT
CCAACCGCCCCTCCTACACCAGAGACAACAGAAGAAGAAACAACTCAGGC
TCCACCCGATTATGTTATTGTTGAACGCGGTCTGGACAGAGACAGATATT
CTTTGAACGGGCCCGATGAATATCAAAACTGTGATTGGGGCAATCCAATG
TATGCATTGACACCTGACATCGGTGATTTGGGATGTACCAATCTCACAGC
CATCTCAGATGCGTATCAAGCTGGTTACAATACTATGTTGAAATACGTTG
GTCCTCACGAGGATGGAGATAAAACATCCACCTACACCATCTTCATTAAG
AATAACGAATGGACAGAACCCAAGCAATATGATTGGAGATTGCGATTTCT
ACAGAATAGTGAATTGTTGATCTCATCAGATGCTTGCAGCAATGGAGAAC
TGCGTATTAAAGAGATACAAGTTTTGACTTTTGATGGTTGGAAAGTGTGG
ACTAAACTAGTACAGAATTACTTTACTTTGGTAAAACATGATGATAATGA
GGTTGCTGGAGGAGAAACgacttcttctttttccttaaCTTTCAACTATT
TCGAGTATAAATATTACAGAGCCTTTTTGGGTCATTTATTCGACATCCAA
ATGGATTGTTTTGGTTCAGGTGTTTATCATTTGTTCGTCAAGTTCGAAGG
TAGTAGAACATATACGCAAGGAGAGGACAACTTTGAACCACCAACTCACA
AACAACCCATACAAACTACACAATCACCAACTCCGCCCATTAAAAATCCA
CCATCAGAAGCATCCTCAACTTCTGATGATAATGTTCCTGTCATAGTTGG
AGCTGTTGTCGGAGGAATTGCATTTATTGTACTATTGATAGCTTTATACT
GTTACTGCAAGGCGAGAAGATACAAAGGAAGGCATAACGGGACAACACAG
CTAAAAACTAAAGAAAGTGGTGATGCCGTTTGGTCAAAGACCGCCCAAAA
ATCACTCAATATACCTGAAGGACCTGAAGatgaaagcaaaaaagaggcaG
CAGAAATTCTTGAACTGGCTAAGGAAATCATCCATGAAAGACACAGTGCA
AAAGAAAGACCCGACGTCATTCCACGATATATAATGGGCCGACCAGCTCC
AAACCCAACAACTTCAGCGTACCAAGACCCTAGACCTAGCATCGGCCCCT
TAGCGGCGAAGACCGACCCCTCAAAGTCGGGTCCTACCTCACCAGCATCA
AATTTGTATACCGATTTAGCAAACGTACGACCAGGAGACTCCGCTTACGA
GAGTTTACGACAAGATGCCGTAATACAGGACGATGAAAAACCACAAGAAT
CTTATGTGGATATGAATGGAATAGGTGGAGAAGAAGCTTATTTAGATTTG
GAGCAAGCAAGAGAAGACTTTGAGAAAGaaatacaacaacaacaagaggg
AAATAATTATGATAATCCTGATTACAAAgaacttcaaaaaattgaacCTG
ACAACGAATGTTGAGTTGTGTTTAGCAATGTGAATTATTTCGTTTAGCCC
AAGCTGGGAAGATGATATTCGCATTTGACGAATCAACAAATGAGACACTA
GCTAATATGATAAAAACGATATAAATAGACTTTAGGAATTGTAGGAAGGC
GCCCCAGAGATTGGTGACTCAAGGGTTCTTTGACCGATTTGTCTCTACCG
TGCACATACATGTTCAACACACCAGTGTATTCACCAAATAACCCATTCGA
AGAGGTATTGGCCGACGATGATGGCTTATttactgtaaatattttttctt
gtaacaGTTTAAAGATTTTGACCTAGCGATTGAAAATCTTATTTGAAGTT
CAAGGATAGTGCTCTAATTGTCATTCCGTAGTTGG
Run BLAST on NCBI

protein sequence of TCONS_00003085-protein

>TCONS_00003085-protein ID=TCONS_00003085-protein|Name=TCONS_00003085-protein|organism=Clytia hemisphaerica|type=polypeptide|length=713bp
MHTCSSAAIIIVAFVAGFVTSQSLLIPKQVDRMKAGDVFQPNPGKKCTDI
RNAENHSSINTNVCKCKSGTNTLYFDFNNEDSCYASSDTVGQTTMFFQGT
NGQVALVGWDNTNKQWNFVQRPIIHENGTLFDFQSCSQRIELELWEYTNY
NFSYTKFNDDIFKPAVPDRKFTFEFSASGQNKKDKSVLQGRLFDISWSCD
KSGEKYFTSVKFAGREEYYFGKTPPSPTAPPTPETTEEETTQAPPDYVIV
ERGLDRDRYSLNGPDEYQNCDWGNPMYALTPDIGDLGCTNLTAISDAYQA
GYNTMLKYVGPHEDGDKTSTYTIFIKNNEWTEPKQYDWRLRFLQNSELLI
SSDACSNGELRIKEIQVLTFDGWKVWTKLVQNYFTLVKHDDNEVAGGETT
SSFSLTFNYFEYKYYRAFLGHLFDIQMDCFGSGVYHLFVKFEGSRTYTQG
EDNFEPPTHKQPIQTTQSPTPPIKNPPSEASSTSDDNVPVIVGAVVGGIA
FIVLLIALYCYCKARRYKGRHNGTTQLKTKESGDAVWSKTAQKSLNIPEG
PEDESKKEAAEILELAKEIIHERHSAKERPDVIPRYIMGRPAPNPTTSAY
QDPRPSIGPLAAKTDPSKSGPTSPASNLYTDLANVRPGDSAYESLRQDAV
IQDDEKPQESYVDMNGIGGEEAYLDLEQAREDFEKEIQQQQEGNNYDNPD
YKELQKIEPDNEC
Run BLAST on NCBI

transcript from alignment at sc0000025:155527..164093+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003085 ID=TCONS_00003085|Name=TCONS_00003085|organism=Clytia hemisphaerica|type=transcript|length=8567bp|location=Sequence derived from alignment at sc0000025:155527..164093+ (Clytia hemisphaerica)
TAGACAGTATGTAAACTAAGAAGTATACCAGAATAATCGAAAATAAACTC
ACTAAAAAGACGGTCAACCGAGATGCATACTTGTTCCTCAGCAGCAATCA
TCATAGTCGCCTTCGTTGCTGGGTTTGTGACATCACAGTCCCTCTTGATC
CCGAAACAGGTCGACCGTATGAAGGCTGGAGATGTGTTTCAGCCCAACCC
TGGAAAGAAGTGTACAGATATACGGAACGCCGAGAATCACTCATCAATCA
ATACGAACGTATGCAAATGTAAGAGTGGAACAAACACattgtattttgat
tttaataatgAAGATTCTTGTTATGCAAGCAGCGACACGGTTGGTAagat
attttttagtatttggTTACAACCCTCTCCCCCGTCGCGAAAAGCTAGAG
ATTTGCCCGAGCAATTCCTGGTCTCCAAAAATGAGAAATTaggagaaatt
aattttttgacaaaGTATCCTTCAAATTAAGTGGTTAAGTCATTCAAATT
GGTCCAGAATTACGACCAAGTTGACATTTTTGACCCTGATAAGGCAAGCA
AAGGTGACGCAAAAAGTGCATACGCGAAGATCTGcaaaaagttaattaaa
aaaattcatcaggTTGAAAAATTCAACAAGAACCTTTCTATATTTTCATT
GTCCAACCCGATATTCAATCGTTTTTCGTTATCAGGTCAAACAACCATGT
TTTTCCAAGGAACGAACGGTCAAGTCGCTTTAGTTGGTTGGGATAATACA
AACAAACAATGGAATTTCGTACAAAGACCTATTATACATGAAAATGGAAC
TTTGTTCGATTTCCAATCTTGCTCACAGAGAATTGAGCTTGAACTTTGGG
AATATACTAATTACAATTTCAGTTACACTAAGTTCAACGACGATATTTTC
AAACCAGCAGTACCGGACAGGAAATTTACTTTCGAAGTAAGTAAAACTTT
TCCAtcgttgatttttttttttttttggtgcgATCGCGtaatcaacaata
tttttttcgcAGGATGGTGTGCTTaaggaatttttttgtgaaaaacctTG
ACCATTCTTGACCATTTTCGAGAACAAAGAGCGCAAATCAAAGATATAAA
ATAATGTACAACTTGAATATTCTAGGCTTGTGAGGCCTTCTTCTTCTAGG
CCTATTTTTCTCTGAATGTTTTTTAAGGAGCGGTCATTCTGATAAAAagt
gaactaattttttttcgtaccaaataaatttttgtatttttcggTTATTC
CACAAAGATTATATTCAATATCAGTAAAGGCCTCTATATAAATGAACAAA
ATTAGAGCGTCTTTGTAAacgaaaaattcttttaaacaaaattcaaataG
AGTTAAATATATATGTACCCCTCTTTCCAGGGTTGGACTGAAACAGTGAA
TGACTCAGTGAAAGTGATATTTGAAACGAAACCCTCCTGTTTCTAACCCG
AACAaattttatggtcccttcattTAACactgccttataaaccttactta
atctgaacaaattttgtGCTCCTGTGCGGGTTTTAGTTATGGATATCCAC
TGTATATTAGTGCTGATAAGACAAGAGTGGGTTGGTTTCACCAAAGACAG
TGCTCTATGTGGAGGAGCAATATAATAAGAAGAAGATCcactgtatatat
ttttaattcttaaaagttttcagccagtggacaaaacaaaaaagataaaa
gtgTACTTCAAGGAAGGCTGTTCGATATATCATGGAGTTGTGATAAGTCT
ggagagaaatattttacgagtgtCAAATTCGCTGGAAGAGAAGAGTGTAa
gtattgattgattgattgattgattgattttggccatttttgacTCCGAA
ATACCGATAAATTTCCTTTCCTCAAACATCGAAACAAACGACAAAAAAGG
ACTACATCATACTGTTAAACCAGTTAAGTAAAGGTGGATGGATACTCAAC
GTGCTCTTTCGCAGAGATTCGAAATACTTGGGTCTGTCAAAAAACGCccc
tatttttcaatttttaacgtACAAATTTCTATCGAACAAAGACAAATTAA
ATTTTAAGggaagatttaaaatttaattcaaattaTACATTTGTATGTTT
ATTTGAAATGACTTTATGACAACTTCGCTGAGTTAcgtcaatttttcact
ttttggaaataaaatgtgcaatactcacaaaaaaaatcaagcagCTCAAC
TGAATAGAAAAATGTACGTCAAAGATTGTAAAATAGGGACGTTTTTTTTT
ACACACCCGGTAGATAAAAGTGGAGCGTTTGCAAATAGATTCTTAAAGGA
TATAAATTTAAATACCAAAATATTTACTTTGCAGATTATTTTGGAAAAAC
TCCTCCATCTCCAACCGCCCCTCCTACACCAGAGACAACAGAAGAAGAAA
CAACTCAGGTATATATATTAGTTAAGATATATTAGCCTTTTTGTAAGAGA
TAACACCAGAATTCCGGTCATCGCACTTTCTTCCAAACAAAAGCTTTGGC
GAAAGCTTTGTGCAACTGCAGGGGTTTTGGGCGATCCATGAGCAATCCGT
TCAGATTTATTTTTCGAGTCTAACTCTAGACCTGAAGGTACATCACGTTT
ATTGTACAATTTgtgttatcattttttttactGTGTTTCAGTTTCAGCCG
CAATTTATTGATTTTATATGTAAAAGATAAAGAGCATGTATTTCTGTGAA
CAGCTAAAAGTGTGCGTCCTCGTTAACATTGAATCGGACCCCCACAGACT
TTGTCAGCAGCACCAAAAGTAAATTAAATAGATTCTCTATCCAAAGTTGT
GCGGTGAAATGACTGGAACGATTTATAATAACCCACAGTTTTCACCCGCG
CAAAATCAACgacggtaaaagtgcttgtttgccgtcgtcctcagtcattC
AGGATATGAGCAGATCAGAAGTTAATTGTCTCCGTCGCTAAAAAAAACAC
ACACAACTACATTAACTCGCTTAAGTCACCTACCACCAACTATTCGCCCC
TATTTGCGAGGTTGTGTAACGCCTAAGTTCCCCGAAAGTCAGCAGATAAG
CAACACACAAACATAATCAATAACTtgcagaaattttaaattttaaactt
cAAAGTGTTTTTCTATAAACAGGCTCCACCCGATTATGTTATTGTTGAAC
GCGGTCTGGACAGAGACAGATATTCTTTGAACGGGCCCGATGAATATCAA
AACTGTGATTGGGGCAATCCAATGTATGCATTGACACCTGACATCGGTGA
TTTGGGATGTACCAATCTCACAGCCATCTCAGATGCGTATCAAGGTAAGA
TTCATAAAACCAATTTAATTGATACACTACAGTACCCCTCGAATTTAGTT
CTGCTTTGTTTATTCCAGAAGCAAACTCAATGTTTTTGGTATATCTGCAA
TCAggttcaaaatatattgagaatttggGGGTATTTTAGCGTTTTACGTT
TTACGGAATTTTTAGGCTCCCTCTAAAAATGGGAATCAATCGTTAACCCC
AGTAATGTAGGTAAGGTATCCAGCtaacacaacattgtttcaaaatgAAC
ATATTAAAGCTTGATATTATTCGAAGTAGAAAAAATGTTATGATATTTAT
CATGAACCGCATGCTAGCTTTTCTTCTTTGAATTTAGCTGGTTACAATAC
TATGTTGAAATACGTTGGTCCTCACGAGGATGGAGATAAAACATCCACCT
ACACCATCTTCATTAAGAATAACGAATGGACAGAACCCAAGCAATATGAT
TGGAGATTGCGATTTCTACAGAATAGTGAATTGTTGATCTCATCAGATGC
TTGCAGCAATGGAGAACTGCGTATTAAAGAGATACAAGTTTTGACTTTTG
ATGGTTGGAAAGTGTGGACTAAACTAGTACAGAATTACTTTACTTTGGTA
AAACATGATGATAATGAGGTTGCTGGAGGAGAAACgacttcttctttttc
cttaaCTGTAAGTAGAAAAGTTTCGCCGATTTTCGCTGAGGTCTCTCCAA
TGAGGGAGGGTACACCAACAACGGTGGATAGTTTCAAAATAGTACGTAGA
AATTTTCCAGAGATTGATTGACAGTGGAGTCAATTTAAttcaaacctcta
taactcgaatgacTCAAACAAGTTATCGCATCCCTACAGTTAAAAATGTC
TTACAAACCTTAACCCATAACTTTCGTTACAAATTTGCGCAACATTACGT
GTTCGTGAAGACTCTCCTACATATAACGAGTTATCTCATTTCATTTTCAG
TTCAACTATTTCGAGTATAAATATTACAGAGCCTTTTTGGGTCATTTATT
CGACATCCAAATGGATTGTTTTGGTTCAGGTGTTTATCATTTGTTCGTCA
AGTTCGAAGGTAGTAGAACATGTAAGTCGCATTTTGGCTTTGATTTGTTT
TTCTTATCATAAAGTCCCGGGGAGGGGGTGGTACTAGGGTTGAGAGCTGA
CGGGGGGGGGTACCGCCCGACTTTCGACCCTTGGACCCTTACTGGGACTA
ACAAAGAGAAAACAAAGAAAATGTTTGTGAATTTCACGACCCTTATTAGG
ACAAATTTGACCAATTTTGATCAAATTTCGATCTTTCCAGGGGTgtaaaa
agttgaaatttttctatttttccgacccttagtgggactgaaatttgatt
ttctgatttttctgacccgtagcgggactttggaaatccaaaaaaggtac
ccttaagagCGGCACacaccgtaccctccatttgcctaagtaCCCCCGGG
CATAAAGTCAATTAAAGCCGAATAGGGGGACGGACCAACACCGTTTTGAT
ACGGAATGTTTCTATAGATAACACCCCTGTNAATTAAAGCCGAATAGGGG
GACGGACCAACACCGTTTTGATACGGAATGTTTCTATAGATAACACCCCT
GTCACCTCAGAAGCCCAGTGGGGTTACTTTAAGTTACAGATAGTGATTTT
CCAAGGGTCCAATGATTTTCATAATTGGGCTAACAGTTCAGAAAATTTCC
CCACCAGGGCCAATTTTTCGACTAATATTTCCAGCGAGGAGCCTGTAATA
ACAGGGGTAAACATCATATTCAATATCGATATTCAGATAATCCAACTATC
TTATCTACATTTAACCCTTAAAGTGCCAATGACTAGatatgggctatata
ggagggcgaagccttcctgtaatgcccagtttgagttagaaatcgtcatt
tttggtctaactcgtaggaattggattgggtttcatggtcaagcaaaaaa
gtgagtttttccagcgagattttaagccaaaaaatcaaaaaaatgcaaaa
atttgacaaaaatcccattttttaAGATTGTGACcgtttttttgaccatt
tttggtcaacgagtgatcccaagaacctccaaattggccctgctttactt
gattctatCCTCTAGTGAATTAATTAATTaactgggcacctttctatcat
tcagtctTTTAATAACGATATCATCAATCTAAAATTAAGCCGGACATAAT
AAGGGATTCTAATTTACGAACAGCCTTCTATCAATATTTTGTCCCCTAAA
AACGGGCCGAGTCGATAGCACTTCGggaaaaataaacaataataataata
atcacaTTTTCATTTGTTCAACAAACTCTAACAAACTCATGGCTATCAAT
CATTTTTACCTCTTTAAACCTTTAGATACGCAAGGAGAGGACAACTTTGA
ACCACCAACTCACAAACAACCCATACAAACTACACAATCACCAACTCCGC
CCATTAAAAATCCACCATCAGAAGCATCCTCAACTTCTGATGATAATGTT
CCTGTCATAGTTGGAGCTGTTGTCGGAGGAATTGCATTTATTGTACTATT
GATAGCTTTATACTGTTACTGCAAGGCGAGAAGGTATAAAATTTAAGGTA
TTTAAGGTATAAAATTTGATCAAGCTCAAACCCTTcgattttgaagtatt
ttgataGCACTCGCGATTGTATTACCCaacaagtaaaatcaaaaagtggt
gtaAGTGGTGCTCTGAGTATAAGATTGTTTGATTTGTAAAGTAATTAAGT
AGAGGGGGCTTATTTATACGGATTCTCGCAATCCTTCTATGCCACTTTTC
TAGAAGGGGGTCAGAATCAGATCTGATTAGTAATCCAATATCATTAACAT
TATGGAATAAAGCTGTTCGAATTGTAAGTGTTCTAACATAGATTGGAAgg
gtaaattttaaaattaatggTCTAATAAGTGGTCCAAAATGGTCTAACAT
AGCCAGGAAGTCTGTaaacccctccaaaatcaaaatattcgattaaatta
agtcgatggcccaaaatcgactttctcgcccagAAAGAATAACTAGAATT
CTCAACATATATTAAAAAGGCAAAGATTATAGTTGCAAGCCCTCTCTCAA
ATATTCTCAGAATTATCTACAAAGAACAGAAGATATTCATCTCAAGAGAT
TGTTTTCATGGATCCTGTCCAAGAAGGATTGCATAAACTACTAAATTGCG
AATATCGCCGGGTGTAAAATATTGCTCATTATTTTCGTTTAGATACAAAG
GAAGGCATAACGGGACAACACAGGTCAGTTTAATACTAAAATCGTGCTGT
GTTATCAAAAAGCCAAGAATAAAAGTCAGAAACTACCAAAACTGAaaccc
aacctcgtccccgtgtatcctaGGCTTTATTTACGATTGACCGccgagaa
taccctggtgttgagGGGGGAGggacttctcaaaacaatatgtcataaaa
aatctgacgttacaaaactacactgcaatgcaatggtttcaaatccagaa
acaaatgaaatctgacgttttgtttttagattACATAATTTTTCGCGTTC
GAAAAAcagacaatgccagggtatAAGTAAGCATCAAAAtactgataata
cgcaggggaACGAGGTTGACTGAAACCAATATTAGTTTATTTAAAGAGAC
GTCAAAGTGAAATCCATAGTGTAGTCTATAACTAGATATAAAAGCGGCAA
AGGGAACCAATTAACTTGTTAATTGTCATTACTGTtgtcactttttcaaa
ttttcagctcaaatttttttttaaatcttccaGCTAAAAACTAAAGAAAG
TGGTGATGCCGTTTGGTCAAAGACCGCCCAAAAATCACTCAATATACCTG
AAGGACCTGAAGGTATGTaatgctttctttttcattttctactctcttca
ggggcacAAGAAGCGTGACAGTACCTCCTTTTGATGTCTATAATTTAACA
TCATTAGTAAAAATAATCCCCCTTTTATCCCCTCCTCGTTTTTCCCACGC
TGGCTAAAAAAACTCTTCGTCCCcacttaagaaaaaaaaatcaaaattga
cgaATTTCGATGTGCCTATCATTTTCAAAGGGTACATTTCAAATTAACGG
GATAATGAAAAggatttttttcaagtaaaatctCTCTAATATCTCTTTAA
TATTGCTGGTCTAAAATAAGAAACGGAACATATGATTTCAGCAAATcagc
ttttttaatttttaattaacaTTTTAAGAGGTGTTCCTCGATACTTAGAT
TGAAAGTTCTCCATTCCCCATCCTCGGTTGCTCCCCATCCTAGCCCCGAA
CAAATTTTTCCCTCCCATACCTCCAGTTGGCCTCAAAACCTATTCCTCCC
TAATCCAGAGGGGCACTATGGGTCTAGTCTATCAATACGAAACATTTCTT
ATAAATTTTAgatgaaagcaaaaaagaggcaGCAGAAATTCTTGAACTGG
CTAAGGAAATCATCCATGAAAGACACAGTGCAAAAGAAAGACCCGACGTC
ATTCCACGATATATAATGGGCCGACCAGCTCCAAACCCAACAACTTCAGC
GTACCAAGACCCTAGACCTAGCATCGGCCCCTTAGCGGCGAAGACCGACC
CCTCAAAGTCGGGTCCTACCTCACCAGCATCAAATTTGTATACCGATTTA
GCAAACGTACGACCAGGAGACTCCGCTTACGAGAGTTTACGACAAGATGC
CGTAATACAGGACGATGAAAAACCACAAGAATCTTATGTGGATATGAATG
GAATAGGTGGAGAAGAAGCTTATTTAGATTTGGAGCAAGCAAGAGAAGAC
TTTGAGAAAGaaatacaacaacaacaagagggAAATAATTATGATAATCC
TGATTACAAAgaacttcaaaaaattgaacCTGACAACGAATGTTGAGTTG
TGTTTAGCAATGTGAATTATTTCGTTTAGCCCAAGCTGGGAAGATGATAT
TCGCATTTGACGAATCAACAAATGAGACACTAGCTAATATGATAAAAACG
ATATAAATAGACTTTAGGAATTGTAGGAAGGCGCCCCAGAGATTGGTGAC
TCAAGGGTTCTTTGACCGATTTGTCTCTACCGTGCACATACATGTTCAAC
ACACCAGTGTATTCACCAAATAACCCATTCGAAGAGGTATTGGCCGACGA
TGATGGCTTATttactgtaaatattttttcttgtaacaGTTTAAAGATTT
TGACCTAGCGATTGAAAATCTTATTTGAAGTTCAAGGATAGTGCTCTAAT
TGTCATTCCGTAGTTGG

Coding sequence (CDS) from alignment at sc0000025:155527..164093+

>TCONS_00003085 ID=TCONS_00003085|Name=TCONS_00003085|organism=Clytia hemisphaerica|type=CDS|length=2142bp|location=Sequence derived from alignment at sc0000025:155527..164093+ (Clytia hemisphaerica)
ATGCATACTTGTTCCTCAGCAGCAATCATCATAGTCGCCTTCGTTGCTGG
GTTTGTGACATCACAGTCCCTCTTGATCCCGAAACAGGTCGACCGTATGA
AGGCTGGAGATGTGTTTCAGCCCAACCCTGGAAAGAAGTGTACAGATATA
CGGAACGCCGAGAATCACTCATCAATCAATACGAACGTATGCAAATGTAA
GAGTGGAACAAACACattgtattttgattttaataatgAAGATTCTTGTT
ATGCAAGCAGCGACACGGTTGGTCAAACAACCATGTTTTTCCAAGGAACG
AACGGTCAAGTCGCTTTAGTTGGTTGGGATAATACAAACAAACAATGGAA
TTTCGTACAAAGACCTATTATACATGAAAATGGAACTTTGTTCGATTTCC
AATCTTGCTCACAGAGAATTGAGCTTGAACTTTGGGAATATACTAATTAC
AATTTCAGTTACACTAAGTTCAACGACGATATTTTCAAACCAGCAGTACC
GGACAGGAAATTTACTTTCGAAttttcagccagtggacaaaacaaaaaag
ataaaagtgTACTTCAAGGAAGGCTGTTCGATATATCATGGAGTTGTGAT
AAGTCTggagagaaatattttacgagtgtCAAATTCGCTGGAAGAGAAGA
GTATTATTTTGGAAAAACTCCTCCATCTCCAACCGCCCCTCCTACACCAG
AGACAACAGAAGAAGAAACAACTCAGGCTCCACCCGATTATGTTATTGTT
GAACGCGGTCTGGACAGAGACAGATATTCTTTGAACGGGCCCGATGAATA
TCAAAACTGTGATTGGGGCAATCCAATGTATGCATTGACACCTGACATCG
GTGATTTGGGATGTACCAATCTCACAGCCATCTCAGATGCGTATCAAGCT
GGTTACAATACTATGTTGAAATACGTTGGTCCTCACGAGGATGGAGATAA
AACATCCACCTACACCATCTTCATTAAGAATAACGAATGGACAGAACCCA
AGCAATATGATTGGAGATTGCGATTTCTACAGAATAGTGAATTGTTGATC
TCATCAGATGCTTGCAGCAATGGAGAACTGCGTATTAAAGAGATACAAGT
TTTGACTTTTGATGGTTGGAAAGTGTGGACTAAACTAGTACAGAATTACT
TTACTTTGGTAAAACATGATGATAATGAGGTTGCTGGAGGAGAAACgact
tcttctttttccttaaCTTTCAACTATTTCGAGTATAAATATTACAGAGC
CTTTTTGGGTCATTTATTCGACATCCAAATGGATTGTTTTGGTTCAGGTG
TTTATCATTTGTTCGTCAAGTTCGAAGGTAGTAGAACATATACGCAAGGA
GAGGACAACTTTGAACCACCAACTCACAAACAACCCATACAAACTACACA
ATCACCAACTCCGCCCATTAAAAATCCACCATCAGAAGCATCCTCAACTT
CTGATGATAATGTTCCTGTCATAGTTGGAGCTGTTGTCGGAGGAATTGCA
TTTATTGTACTATTGATAGCTTTATACTGTTACTGCAAGGCGAGAAGATA
CAAAGGAAGGCATAACGGGACAACACAGCTAAAAACTAAAGAAAGTGGTG
ATGCCGTTTGGTCAAAGACCGCCCAAAAATCACTCAATATACCTGAAGGA
CCTGAAGatgaaagcaaaaaagaggcaGCAGAAATTCTTGAACTGGCTAA
GGAAATCATCCATGAAAGACACAGTGCAAAAGAAAGACCCGACGTCATTC
CACGATATATAATGGGCCGACCAGCTCCAAACCCAACAACTTCAGCGTAC
CAAGACCCTAGACCTAGCATCGGCCCCTTAGCGGCGAAGACCGACCCCTC
AAAGTCGGGTCCTACCTCACCAGCATCAAATTTGTATACCGATTTAGCAA
ACGTACGACCAGGAGACTCCGCTTACGAGAGTTTACGACAAGATGCCGTA
ATACAGGACGATGAAAAACCACAAGAATCTTATGTGGATATGAATGGAAT
AGGTGGAGAAGAAGCTTATTTAGATTTGGAGCAAGCAAGAGAAGACTTTG
AGAAAGaaatacaacaacaacaagagggAAATAATTATGATAATCCTGAT
TACAAAgaacttcaaaaaattgaacCTGACAACGAATGTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001711XLOC_001711Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003085-proteinTCONS_00003085-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003085-exon-sc0000025-1491911889:155527..155869TCONS_00003085-exon-sc0000025-1491911889:155527..155869Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1510915933:155527..155869TCONS_00003085-exon-sc0000025-1510915933:155527..155869Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1575043694:155527..155869TCONS_00003085-exon-sc0000025-1575043694:155527..155869Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1491911889:156212..156462TCONS_00003085-exon-sc0000025-1491911889:156212..156462Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1510915933:156212..156462TCONS_00003085-exon-sc0000025-1510915933:156212..156462Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1575043694:156212..156462TCONS_00003085-exon-sc0000025-1575043694:156212..156462Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1491911889:157193..157322TCONS_00003085-exon-sc0000025-1491911889:157193..157322Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1510915933:157193..157322TCONS_00003085-exon-sc0000025-1510915933:157193..157322Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1575043694:157193..157322TCONS_00003085-exon-sc0000025-1575043694:157193..157322Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1491911889:157861..157934TCONS_00003085-exon-sc0000025-1491911889:157861..157934Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1510915933:157861..157934TCONS_00003085-exon-sc0000025-1510915933:157861..157934Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1575043694:157861..157934TCONS_00003085-exon-sc0000025-1575043694:157861..157934Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1491911889:158649..158820TCONS_00003085-exon-sc0000025-1491911889:158649..158820Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1510915933:158649..158820TCONS_00003085-exon-sc0000025-1510915933:158649..158820Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1575043694:158649..158820TCONS_00003085-exon-sc0000025-1575043694:158649..158820Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1491911889:159164..159483TCONS_00003085-exon-sc0000025-1491911889:159164..159483Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1510915933:159164..159483TCONS_00003085-exon-sc0000025-1510915933:159164..159483Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1575043694:159164..159483TCONS_00003085-exon-sc0000025-1575043694:159164..159483Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1491911889:159777..159897TCONS_00003085-exon-sc0000025-1491911889:159777..159897Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1510915933:159777..159897TCONS_00003085-exon-sc0000025-1510915933:159777..159897Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1575043694:159777..159897TCONS_00003085-exon-sc0000025-1575043694:159777..159897Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1491911889:161202..161409TCONS_00003085-exon-sc0000025-1491911889:161202..161409Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1510915933:161202..161409TCONS_00003085-exon-sc0000025-1510915933:161202..161409Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1575043694:161202..161409TCONS_00003085-exon-sc0000025-1575043694:161202..161409Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1491911889:162069..162099TCONS_00003085-exon-sc0000025-1491911889:162069..162099Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1510915933:162069..162099TCONS_00003085-exon-sc0000025-1510915933:162069..162099Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1575043694:162069..162099TCONS_00003085-exon-sc0000025-1575043694:162069..162099Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1491911889:162610..162688TCONS_00003085-exon-sc0000025-1491911889:162610..162688Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1510915933:162610..162688TCONS_00003085-exon-sc0000025-1510915933:162610..162688Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1575043694:162610..162688TCONS_00003085-exon-sc0000025-1575043694:162610..162688Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1491911889:163238..164093TCONS_00003085-exon-sc0000025-1491911889:163238..164093Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1510915933:163238..164093TCONS_00003085-exon-sc0000025-1510915933:163238..164093Clytia hemisphaericaexon
TCONS_00003085-exon-sc0000025-1575043694:163238..164093TCONS_00003085-exon-sc0000025-1575043694:163238..164093Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:155527..164093 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0149317	0.0145608	0	0.0165403	0.0402725	0	0.0383941	0.0718883	0.0125827	0.0155857	0	0.0397777	14.6675	13.1491	0.0339149	0.0545938	8.86646	10.3287	31.1106	31.6414	11.6072	10.6049	1.45523	2.05457	3.38265	4.02048	0.0409487	0.0218508	0.016573	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003085 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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