TCONS_00003501 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003501
Unique NameTCONS_00003501
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3748

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003501 ID=TCONS_00003501|Name=TCONS_00003501|organism=Clytia hemisphaerica|type=transcript|length=3748bp
cagacaaaCATGAATCATAAATAGAAATGtataaaagattttccaaacAT
CAGAATAATGAAGAAACAaataaaagtgatttagagTATGATCATATTGT
CAGTGAATTGGAAAGATCTTATTCTAGCCTTCAAAGCATAAACAATAATG
GAAGTGCATTTAGCAGTGCTTTCTCACTTCCACCAGAATCTTCATCACGT
TCCACTGCGACAAATGGTGAAAAACATGATCCACATTTCGTTATGAATGA
GCAATTTCAAGCCATTCAGCTGGctcaaatcttggaaaaaacAGCCTTTG
AACTAAGGGTGTATTCAAAAAGAAGATTTCAACGATTCACCCCTAAAACA
AGaaGAAAGAAGAAGTTGCCACCATGTGTGACAAACAATTTGTTCCTTAT
CACCCTTGTATGGCAGTTGATTTGTATTGCGATGCTTGAGATTATTGATG
TTTTATTCAAGCGTTTCGAAAGAACTGAAAGGGAATACTATTACACTgTG
ATCAGCATAATGGTGGTCTTTCAATTTGTCAATTTGGTGTTATCGATTTC
TGCTACCATGAAATTGAAGAAGCAATATATCCACAAGACAGCCAGTATGA
AGTTCATGTTGCAATCTTACGCTTCCACAGTTGTCCTCTTCGCTGGATTA
TACACCTTTGTGGCCAAAATAAATCCTCATTACTTCAGTGGGTTGGAGAA
GGTTAATAGAGGAGACTTTCGATCAGTCTTGTTGTTCGCCAAACTGTTCT
TCACGTCAATATCCACTGGTACACTTTGTGGTGCTGCAAAAGTGACAGCT
GTACACTTCTCAACAGAGTTCATCATGGCACTTCAGATGTTGTTGAGCTT
CATCTACTTTGCATCCATCCTTTCACAAGTCTTGAGCCCTGGAGATGGCA
AATCCAAGGACGTCATGTACAAGATGTTGCTTGAACAGAACGAACAAATG
CTCAGCCATGTCACTGCGAAAAAGAAGAGCAAATCGCACAGTGAAACCAT
CTAATTATTGGACTGAGATTTTCAGATTCACGGTCAATACGATCCAACGC
CATTTCCGGGACTgtaagtttaatattttttttttttttaaatcaattct
GAATGAATAGAACTGGACAAAGTAGGGCTATCTCATTTTTCCAACAGTTA
TGTGGGTTTAAATGTCGGGTCGCTATTTTTCCTTGCCAAAGAAGGGGACA
AAAGGGCGGTAATATTATAACCGGGTAAAAGTGTTTCTCTTTTAACCTCA
AAAGAGTTTCACTAAGGTCATTTTTTCAGGCGTAGGTCTTCTTAGAGATG
ATGATGGGTATGAAAACCATCAAAAGAAAAGTCTTTCTAAAATCTTTTCT
CTCGTAGTcacttttttgttgattttatgtTTCTACTTAGGGTCACAAAC
GTACTTAACCCGATATTCTATACCCTAGTATACTTGGCCCCCCCCCTCCG
CCTCTgggtttttctttgtttttggtaggctggcgaatgaaaaattaccT
TTCGAACGGTGAATTGTAATTTTTGTAACTTCAATCAAAGAGGTTATTTT
TGAACGGGGGGGAGGGCTCTGATAATTTCTCtttctgaaatattttatat
GACAAGATTATAACTAGTAGGACTCGTAGGATTTATAtaagaaattttcg
aaaagcaTTTAGATAACCTTATTAAAATTCAAGCATTGAAATATTTACTA
AATTAgtctaaattattttttaaatagagtcatttaattttgattttttg
taaattacatatttttatatagttaaatttttgtttttatttttatatta
caGAATTTGTGTATTATAAACCTTCCTAAATCGCGACTATTTCTCTAATT
TTCAATTAGACTATGAATTTTTTTCCGGCTAGATTATCCCTTAAGATGTA
TTTGTAGAATGtcttttggtttgatttttgaCCCGATAATTACGGAAATC
TCAAAATTCATCAACGTAGAGGTTCTACACTACGTTATACTCTTATACAG
TAAAAGATACAtgaagggaagaaattttcgcggaattttaTTTCGtggtt
cacagctcaaaattcgtCAATATCGCGAAATtgaattccgcgaaaatttc
ttcccttaaggtaatccACTGTatgtctacacgtttttttttataagaac
aaactatataagaacataaggcttcgaggcccaaaaatttaagaacattc
taagaacataccaaggctttggagacttaatNACAAAAGGGCGGTAATAT
TATAACCGGGTAAAAGTGTTTCTCTTTTAACCTCAAAAGAGTTTCACTAA
GGTCATTTTTTCAGGCGTAGGTCTTCTTAGAGATGATGATGGGTATGAAA
ACCATCAAAAGAAAAGTCTTTCTAAAATCTTTTCTCTCGTAGTcactttt
ttgttgattttatgtTTCTACTTAGGGTCACAAACGTACTTAACCCGATA
TTCTATACCCTAGTATACTTGGCCCCCCCCCTCCGCCTCTgggtttttct
ttgtttttggtaggctggcgaatgaaaaattaccTTTCGAACGGTGAATT
GTAATTTTTGTAACTTCAATCAAAGAGGTTATTTTTGAACGGGGGGGAGG
GCTCTGATAATTTCTCtttctgaaatattttatatGACAAGATTANACAA
TAATTTCTGATTTCGCGTGTTTGGTGGTTGCGTGTTTATCCTCGTTATTA
TGGGAATTTCCATTCTATTGGGTAAGTTGGTTGGTTATTTTGGTAAGTTC
GCATGAAACGATAAATAATTCTACTTTAAGAAACTGAATGCTTCttaata
tttcatatatatCGCTTTTATTTTGGTCTGAAAGCAGTGGGGTGTGGACA
AAAACCGCATATTACGTCTTAGTTACATAACATAGCATNCAGGATTTATA
taagaaattttcgaaaagcaTTTACTTGTAGATAACCTTATTAAAATTCA
AGCATTGAAATATTTACTAAATTAgtctaaattattttttaaatagagtc
atttaattttgattttttgtaaattacatatttttatatagttaaatttt
tgtttttatttttatattacaGAATTTGTGTATTATAAACCTTCCTAAAT
CGCGACTATTTCTCTAATTTTCAATTAGNATGATTTTGTAAACACGCTTT
CAAATGTGTAGGatccaaaattgattttgtaacAACTATTTGACCTTGAC
AGTTAGTTGAATAGTGTTTTAAATTACGTAACTCAAGTGATGTTACATTT
CTTCGATGTAACTAACACGTCGTAATTGTAATTTCAAAGTGTGATTGATA
GGGAATCGCCTCTTTTTTATTCAGTTACAACTCCTCTAAATAATTGATGT
TTAATACTCACatggtttattttttttgaacgtgaataacaattttttgt
cgcgttttcttttttttataagaatatccaaaatttctgaaggttttgga
tttaaatttttgagttttaaacctcaaaatgttctcaacttatttttaat
attttggctatcaaAGCCTTACGCTCTTTTATAGTTTATTttgatggcgg
attggcggccgccctcGTTAAAGAATCCTCGAAAACGAGGACTGGGTTAT
CAGACCTCCCAAACCTTccaaatgttaaaaattttcccTATCTTCCAAGC
TTAagcatctgggtgccagataagtgaAAAACGTGTACACGTCAGAAATA
CTGAAggccgaaatattaagaacaagttaagaacaaggctttgcggac
Run BLAST on NCBI

protein sequence of TCONS_00003501-protein

>TCONS_00003501-protein ID=TCONS_00003501-protein|Name=TCONS_00003501-protein|organism=Clytia hemisphaerica|type=polypeptide|length=325bp
MYKRFSKHQNNEETNKSDLEYDHIVSELERSYSSLQSINNNGSAFSSAFS
LPPESSSRSTATNGEKHDPHFVMNEQFQAIQLAQILEKTAFELRVYSKRR
FQRFTPKTRRKKKLPPCVTNNLFLITLVWQLICIAMLEIIDVLFKRFERT
EREYYYTVISIMVVFQFVNLVLSISATMKLKKQYIHKTASMKFMLQSYAS
TVVLFAGLYTFVAKINPHYFSGLEKVNRGDFRSVLLFAKLFFTSISTGTL
CGAAKVTAVHFSTEFIMALQMLLSFIYFASILSQVLSPGDGKSKDVMYKM
LLEQNEQMLSHVTAKKKSKSHSETI
Run BLAST on NCBI

transcript from alignment at sc0000028:708860..718636-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003501 ID=TCONS_00003501|Name=TCONS_00003501|organism=Clytia hemisphaerica|type=transcript|length=9777bp|location=Sequence derived from alignment at sc0000028:708860..718636- (Clytia hemisphaerica)
CAGACAAACATGAATCATAAATAGAAATGTATAAAAGATTTTCCAAACAT
CAGAATAATGAAGAAACAAATAAAAGTGATTTAGAGTATGATCATATTGT
CAGTGAATTGGAAAGATCTTATTCTAGCCTTCAAAGCATAAACAATAATG
GAAGTGCATTTAGCAGTGCTTTCTCACTTCCACCAGAATCTTCATCACGT
TCCACTGCGACAAATGGTGAAAAACATGATCCACATTTCGTTATGAATGA
GCAATTTCAAGCCATTCAGCTGGCTCAAATCTTGGAAAAAACAGCCTTTG
AACTAAGGGTGTATTCAAAAAGAAGATTTCAACGATTCACCCCTAAAACA
AGGTAAGAGTAATGAAGTTGTGGTTAAGCTATCATTTTTTTAAGATCTTG
CATCTTCCTGAGCTATATTTTACTCAAGCCTATTCGAACAAGTGAGGTTC
ATCATTCAATTCTCCACAATTTTGTCTTTATAAAAAAACTTATAAAAGGT
TCAAGTAATTTAATGAAACTTCTCGACATTACCACAAAGAATTTTCAAAG
AAGACCTATGTTGCATTACCCTTTTAGTGTTTTCATCATAAGCTGTTAAA
TGTCCCTTAGAATCTAGTATTCTTTACCAATTTAAAATTTTAGAAGAAAG
AAGAAGTTGCCACCATGTGTGACAAACAATTTGTTCCTTATCACCCTTGT
ATGGCAGGTGAACCATTGTATATTTTGAATTTAGCAAAAGTTAATTAAAA
AAGGCCTTCCTGCAGAAGAGTAGACAGAGGACCTTTTTATGGCACAGTAA
TTATTTCTTTTATATTATATGATACATATATTATATTATAGTAGGGGGGC
CAAGCCTTGGGTTCCGTGACATCTTTTCTACGACCTAGCCATTTTTAGTC
TATTCCAAAGAACAGTATATTACAAGATATTTTTGAGAGGGAGGACGCGG
ATTAGGCCCAGGAGTACTTTTTATGACCAAAATAGTGACGCCATAGGCAA
AACTGCAAGGGAAAATAAGGGGTAGAGAAATAGCTGATTTTCAAAAGTCA
GAATAAATGAAAATGATTGATACTATCTGAAAGAGCATGAAATTCTGAGC
AAAAAAATGTATTACAACAACTCTCTGACTAAAACACACAAAGGAATACA
GCCGCTTTAAGACCAACTAACTGTCAGCTCTAACTGCGATTTGACGTCAG
ATCTCGTCTTTTGATCGTACTGACGTCGGTATGTTTTTGAACTTCAGGTG
ACTGTATTTCTTTGTGTGTTTTAGTCAGAGATTTGTTGTAATACATTTTT
TTGCTCAGAATTTCATGCTCTTTCAATCATTTTCGTTTATTCTGACTTTC
TCTACCTCCTATTTTCTCTTGCAGCTTTGCCTATGGCGTCACTATTTTGG
TCATAAAAAGTTTTCCCGGGCCTAATCCGCGTCCTCCCTCTTAAAAATAT
CTTGTAATATACTGTTCTTTGGAATATACTAAAAATGGCTAGGTCGTAGA
AAAGATGTCACGGAACCCAAGGCTTGGCTCCCTACTATTATATTATATGC
TCTCATACACAAATTTTCACCCCTCTTGTCTACACTATTGCCCTAGTTGT
CCATATTGAGGAGGTATGACAGGAGTGAGAAGATATTAGATATTTCTCTC
AGTGTCGAACACAATGTTAACCCTATTAACCCCAACCTTTTTTGATTTTT
GTAGCCCCAGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGTAGACTACCACCCT
CTATTATTTTTGATCTAGAAGAGCTATGGTCATAAAAACTGGTACAGATG
TTCTCCATAGTGACACAAATTTCCAGGAAGAACAAACAATTTTGATGACG
TCATCCAAAAAGCGATGACGTCATCATAAAATTTCCACTTGTCAGAAAAA
AGCAAAAATGTATGGTTTACAAAAATGTCTCTCACAGTCGAAACAATAAA
GATATTGAGATTCTGTTTAAAGATTCTAAAAGATAAAAGGTTGCTCCTTA
ACATAATTGCTGGTTTTGTATTTCCCATTGAGACTTTTTGTTAAAATCCA
TGCTGAAAATGAGTAAAATTTTCAAAATTTGATGACGTCATCATTTTCAA
AATTTTTTGTAAATTCTTTTAAAATCACATCGGTAATACCTATCGTCTGT
CAAAATTTGAATATGAATGGATCAATACTTCAGAAGTTATTGCAGTTTTA
AAATTTTTAGTTTTAAGCGATTTTAGCTTGGTTTTATGTGATGTTTCACA
ATAAAGTCATAAAACCTGATCTAGAAGACCTATGACCGTAAACATTTGCA
CAAGTACTCTTGATAAGATTTTATTAAAAGTCAGAAAGTTTCAAGTCGTT
TCAAAAAATTTTCTCCGAGATATACACAAAAGCACACCAGCGTGGTAGAT
TCTACCCCCCCCCCTGGGGCTAATAGGGTTAAGATTCTGTTTGAAATTTT
TGAAGGATGAGACAATTCTTTATTGGCAAATTTTGTGTTTTTCATGAAAA
TTCAATGATAAAATCAATGCTGAAAATAAGTGAGATTTTGTAACTCAATA
ATGGCATATAATAATTATGTCATCATTAAAATGGGAGTCGGCAGAGGTAC
TTTTGTACTACCTTTTGTACTTCATCAGCTTCAGGACATTGAGCTTTTTA
TAATGACCAATCTGATTGAATTATCAGTATACAGAATGAACAAAGAAAGC
CTTCTTGAAATATAATTTAATGTGTGTATAGGGTGGGGGGTTTCAGGGGA
TACCCAATTCCGCAATTCCGCCAATTTTTTCTCCAATTTCCGTCAAACCG
TCTAAAAATGAACCGTGATTCCGCCACCAAAAATTCATTTGAAATTCAAG
ATTTTTGTCAAAAATTGCACGAATTTATAATATTTTTTGCCAATTCCGAA
ATTCTGCAAAACTTTTTGCTAATTTCCGTTTTTCCGCACTAAAATTGTCT
AATTTTATGTCTACGTCTAAATTTTTGCCATATTCCGCCACTCCATCCAA
AAAAAGAGCCGATTCCGCTCCTCCGCCAACCATGAAACCCCCCTGTATAT
TAGTTGTTATTTTAGAGATTGAGTTATAGTTAGGTACCAGGCCAAATAAT
GATAACTCAGTGTGTATTTTCAAAGACAACTTTCCAGATGTGATGATGAT
GATGATGATGCAATGATTCTTTCACTCCTCATAATTTTGTATTTTATTTG
TATAAATCTTTTTCAGTTGATTTGTATTGCGATGCTTGAGATTATTGATG
TTTTATTCAAGCGTTTCGAAAGAACTGAAAGGGAATACTATTACACTGTG
AGTTCACCTTTCTCTTATTCACTTTTCTTTTCCATGGAAGGGGGTTTAGA
AATCCAGTTTAAGGGGCTCTTTGTGTTGATTTTGACGATATGTATGGAAA
CTGAAGAATCTGTCTTTTTCTGTTATGCAAAAGAATTTGGAAAACTTAGA
AATGATCCATTGTAACTTAAGCAAGGATGAGCCTTGATGAGAAGCATGGA
AAATAAAGTGTCACTGCCAATTTTCCTTATTTTCTATTGTTTAGGTGATC
AGCATAATGGTGGTCTTTCAATTTGTCAATTTGGTGTTATCGATTTCTGC
TACCAGTAAGCTTTCTTTTTCAGAGCACTGATTGGTTCATTTAGGTCAAT
TACATCATAATTTTAGGTTTGGACCAATCAGATCGATTTGATTGTCAATG
GAATTTTTTGATTGTTATAGATAAGTATAGTACTGGTCATTCGATTTCAT
TCGAACCCAGGGGTATGTGTACACGTGAAATTAAATGCATGATAATTGTA
ATGAGAATTTCATTTCAAAAAATGTGCACGAAATCCAATCCTGGAAATAT
CTNGTTATAGTTAGGTACCAGGCCAAATAATGATAACTCAGTGTGTATTT
TCAAAGACAACTTTCCAGATGTGATGATGATGATGATGATGCAATGATTC
TTTCACTCCTCATAATTTTGTATTTTATTTGTATAAATCTTTTTCAGTTG
ATTTGTATTGCGATGCTTGAGATTATTGATGTTTTATTCAAGCGTTTCGA
AAGAACTGAAAGGGAATACTATTACACTGTGAGTTCACCTTTCTCTTATT
CACTTTTCTTTTCCATGGAAGGGGGTTTAGAAATCCAGTTTAAGGGGCTC
TTTGTGTTGATTTTGACGATATGTATGGAAACTGAAGAATCTGTCTTTTT
CTGTTATGCAAAAGAATTTGGAAAACTTAGAAATGATCCATTGTAACTTA
AGCAAGGATGAGCCTTGATGAGAAGCATGGAAAATAAAGTGTCACTGCCA
ATTTTCCTTATTTTCTATTGTTTAGGTGATCAGCATAATGGTGGTCTTTC
AATTTGTCAATTTGGTGTTATCGATTTCTGCTACCAGTAAGCTTTCTTTT
TCAGAGCACTGATTGGTTCATTTAGGTCAATTACATCATAATTTTAGGTT
TTGACCAATCAGATCGATTTGATTGTCAATGGAATTTTTTGATTGTTATA
GATAAGTATAGTACTGGTCATTCGATTTCATTCGAACCCATGGGTATGTG
TACACGTGAAATTAAATGCATGATAATTGTAATGAGAATTTCATTTCAAA
AAATGTGCACGAAATCCAATCCTGGAAATATCTTGAAAATATGATTGTGT
GATCAAGGTTTTGGTATGGTGCGTGATAGGGCGACAATTTTAGGCATAAT
GCGCGATGCGTAGTAACGCCTGGGGGTTATTAACTGTTGAACACAATCTA
CAAGTGAGTGAAAGAAAAAAGTGTGTTGATTGTATTTGTAATTCGCATTT
CTTTGGTTATTTGAATTTTAGTGAAATTGAAGAAGCAATATATCCACAAG
ACAGCCAGTATGAAGTTCATGTTGCAATCTTACGCTTCCACAGTTGTCCT
CTTCGCTGGATTATACACCTTTGTGGCCAAAATAAATGTAAGAGTTTCAT
AATCGATGTTTATTTCGATATTCACTCTTAACTCTCCTCTGTTTGCCGCG
ATGGACATATGAAACTAGTGCTCTATTTCCTTTACAAAGACAATGCAATA
AATAGCTGAGCCGATCTGAAGGGTTATAAAATCAATTTTTGATAAGACAT
TTTGAAGCTCAAACCTGTTTTAATTAAAAAATAATTCATCAATAGTCATT
GGAACAACTAAACTTACATCAAAATTCGTTTTAGCCTCATTACTTCAGTG
GGTTGGAGAAGGTTAATAGAGGAGACTTTCGATCAGTCTTGTTGTTCGCC
AAACTGTTCTTCACGTCAATATCCACTGGTACACTTTGTGGTAAGTTAGC
TCTGGTTTAGACAGACCGCTTTTTCGCCTTGCTTACTTTGATTGATTGTG
AATTAAAGTCACTGACCTTTATATACGCTGGACTAAGCAATATCCGCCAT
CTTTAATTGGAGTTTTTTTGGAATTGGTACCCGAGAAGAAGCCATTGCAA
TGTTAAGAATTAACGTCCTAACGGCGCTACATTATCAAAAGTATTCGAGG
AAATGTAGATCTAGCGCTCTCAATGCATTTTCACTGCTATCGAGTAGTGC
TACCATTAGGGTACCACTTTCAAAAAAACTCCGATCAAAGAATTTGCTTG
GTTGGGATTGAAAAACTTGGTCCAGGTTATACAAAGGTCAGTTATTAAAG
TATGCAGAAAGCTGACTGTCTAAAGTCAATGCATTGCCCTCTCTTGACGT
CAGAATTGCAATGACTTTGTTCAATCTTGTTCAAGCAGAGATTTTAACTG
CAAGCTTTTTCTACTTTTTTTGCCTAACTAGTCTAACAATTTGAAGAGGC
AGTGTAGAATGTATACCGTCAAAACTAGTTAGAGCTTACTCCTTTGAAAA
TGAAATTCTATCCAGTGTGGAGCACACGTCTGTCATTCAATCATAATTTT
GAGAACGCCCAATGATTGTACCTCTTTATTTTTACAGGTGCTGCAAAAGT
GACAGCTGTACACTTCTCAACAGAGTTCATCATGGCACTTCAGGTTTACA
CACATTAAGATCCTTTTTTATTTCTGACAAATTTCGAATTTTCTTGTGTA
ACTAATGAAATCCAAGAATCTGTGAATGATTTCATGTACTAAGATAATAT
ATTCGTACATAGGCCATTTCACAGTCGAAATGGATCATGGGTAATCAGCC
AGGGCTGATTGCGCCTCCATAGCGGATTTCTCTCGGCTAGACGCAATAAT
CTTCAAAAAAATTCAAAACTTTGGACCAATAGTAATCGTCATTAGCGCGC
AGTGGTCCTGATTTCCCGTTACGCCTTGCGACTGTGAAATGGAGGTATTA
ATTAATGATAGTAAGTTGATGGATTGCTACTTTACGCATTTACAATTTTG
AAACATCATTTTAGATGTTGTTGAGCTTCATCTACTTTGCATCCATCCTT
TCACAAGTCTTGAGCCCTGGAGATGGCAAATCCAAGGACGTCATGTACAA
GATGTTGCTTGAACAGAACGAACAAATGCTCAGCCATGTCACTGCGAAAA
AGAAGAGCAAATCGCACAGTAAGTCAATATCGTTTCATCCTGTGTCTATT
GAGATTCCCAAACTCGTTGCCATTGACTGTCTGTTGTCATGTCATAATCT
GTCCTGATTTGAAATTTTCGAAAATAAGTTTGTAGAAAATATTTCTGGGC
AGATATTCCATAAAGCACTTTTCACGTTAAATTTTCAAATGAAAAATTTT
CGGTAAAGTAGCACAGAGTGTGATACGAACCTATAACGAGTTACACATTG
GTCTGTTAAAGGTTGTTTTGACTCCTTGCATCGGATATTTAGTGATCATT
TTGTACCCTAATTTCATTTGCGATTTTTAGTTATCGGTTGTAGGTTGCGC
TAGCTACGGTCTAGGTGTTCGTTTCATGTGCTTTTGATAATGTGTGTCTC
CTATTTGTATTGTTAACAGGTGAAACCATCTAATTATTGGACTGAGATTT
TCAGATTCACGGTCAATACGATCCAACGCCATTTCCGGGACTGTAAGTTT
AATATTTTTTTTTTTTTTAAATCAATTCTGAATGAATAGAACTGGACAAA
GTAGGGCTATCTCATTTTTCCAACAGTTATGTGGGTTTAAATGTCGGGTC
GCTATTTTTCCTTGCCAAAGAAGGGGACAAAAGGGCGGTAATATTATAAC
CGGGTAAAAGTGTTTCTCTTTTAACCTCAAAAGAGTTTCACTAAGGTCAT
TTTTTCAGGCGTAGGTCTTCTTAGAGATGATGATGGGTATGAAAACCATC
AAAAGAAAAGTCTTTCTAAAATCTTTTCTCTCGTAGTCACTTTTTTGTTG
ATTTTATGTTTCTACTTAGGGTCACAAACGTACTTAACCCGATATTCTAT
ACCCTAGTATACTTGGCCCCCCCCCTCCGCCTCTGGGTTTTTCTTTGTTT
TTGGTAGGCTGGCGAATGAAAAATTACCTTTCGAACGGTGAATTGTAATT
TTTGTAACTTCAATCAAAGAGGTTATTTTTGAACGGGGGGGAGGGCTCTG
ATAATTTCTCTTTCTGAAATATTTTATATGACAAGATTATAACTAGTAGG
ACTCGTAGGATTTATATAAGAAATTTTCGAAAAGCATTTAGATAACCTTA
TTAAAATTCAAGCATTGAAATATTTACTAAATTAGTCTAAATTATTTTTT
AAATAGAGTCATTTAATTTTGATTTTTTGTAAATTACATATTTTTATATA
GTTAAATTTTTGTTTTTATTTTTATATTACAGAATTTGTGTATTATAAAC
CTTCCTAAATCGCGACTATTTCTCTAATTTTCAATTAGACTATGAATTTT
TTTCCGGCTAGATTATCCCTTAAGATGTATTTGTAGAATGTCTTTTGGTT
TGATTTTTGACCCGATAATTACGGAAATCTCAAAATTCATCAACGTAGAG
GTTCTACACTACGTTATACTCTTATACAGTAAAAGATACATGAAGGGAAG
AAATTTTCGCGGAATTTTATTTCGTGGTTCACAGCTCAAAATTCGTCAAT
ATCGCGAAATTGAATTCCGCGAAAATTTCTTCCCTTAAGGTAATCCACTG
TATGTCTACACGTTTTTTTTTATAAGAACAAACTATATAAGAACATAAGG
CTTCGAGGCCCAAAAATTTAAGAACATTCTAAGAACATACCAAGGCTTTG
GAGACTTAATNACAAAAGGGCGGTAATATTATAACCGGGTAAAAGTGTTT
CTCTTTTAACCTCAAAAGAGTTTCACTAAGGTCATTTTTTCAGGCGTAGG
TCTTCTTAGAGATGATGATGGGTATGAAAACCATCAAAAGAAAAGTCTTT
CTAAAATCTTTTCTCTCGTAGTCACTTTTTTGTTGATTTTATGTTTCTAC
TTAGGGTCACAAACGTACTTAACCCGATATTCTATACCCTAGTATACTTG
GCCCCCCCCCTCCGCCTCTGGGTTTTTCTTTGTTTTTGGTAGGCTGGCGA
ATGAAAAATTACCTTTCGAACGGTGAATTGTAATTTTTGTAACTTCAATC
AAAGAGGTTATTTTTGAACGGGGGGGAGGGCTCTGATAATTTCTCTTTCT
GAAATATTTTATATGACAAGATTANACAATAATTTCTGATTTCGCGTGTT
TGGTGGTTGCGTGTTTATCCTCGTTATTATGGGAATTTCCATTCTATTGG
GTAAGTTGGTTGGTTATTTTGGTAAGTTCGCATGAAACGATAAATAATTC
TACTTTAAGAAACTGAATGCTTCTTAATATTTCATATATATCGCTTTTAT
TTTGGTCTGAAAGCAGTGGGGTGTGGACAAAAACCGCATATTACGTCTTA
GTTACATAACATAGCATNCAGGATTTATATAAGAAATTTTCGAAAAGCAT
TTACTTGTAGATAACCTTATTAAAATTCAAGCATTGAAATATTTACTAAA
TTAGTCTAAATTATTTTTTAAATAGAGTCATTTAATTTTGATTTTTTGTA
AATTACATATTTTTATATAGTTAAATTTTTGTTTTTATTTTTATATTACA
GAATTTGTGTATTATAAACCTTCCTAAATCGCGACTATTTCTCTAATTTT
CAATTAGNATGATTTTGTAAACACGCTTTCAAATGTGTAGGATCCAAAAT
TGATTTTGTAACAACTATTTGACCTTGACAGTTAGTTGAATAGTGTTTTA
AATTACGTAACTCAAGTGATGTTACATTTCTTCGATGTAACTAACACGTC
GTAATTGTAATTTCAAAGTGTGATTGATAGGGAATCGCCTCTTTTTTATT
CAGTTACAACTCCTCTAAATAATTGATGTTTAATACTCACATGGTTTATT
TTTTTTGAACGTGAATAACAATTTTTTGTCGCGTTTTCTTTTTTTTATAA
GAATATCCAAAATTTCTGAAGGTTTTGGATTTAAATTTTTGAGTTTTAAA
CCTCAAAATGTTCTCAACTTATTTTTAATATTTTGGCTATCAAAGCCTTA
CGCTCTTTTATAGTTTATTTTGATGGCGGATTGGCGGCCGCCCTCGTTAA
AGAATCCTCGAAAACGAGGACTGGGTTATCAGACCTCCCAAACCTTCCAA
ATGTTAAAAATTTTCCCTATCTTCCAAGCTTAAGCATCTGGGTGCCAGAT
AAGTGAAAAACGTGTACACGTCAGAAATACTGAAGGCCGAAATATTAAGA
ACAAGTTAAGAACAAGGCTTTGCGGAC

Coding sequence (CDS) from alignment at sc0000028:708860..718636-

>TCONS_00003501 ID=TCONS_00003501|Name=TCONS_00003501|organism=Clytia hemisphaerica|type=CDS|length=978bp|location=Sequence derived from alignment at sc0000028:708860..718636- (Clytia hemisphaerica)
ATGTATAAAAGATTTTCCAAACATCAGAATAATGAAGAAACAAATAAAAG
TGATTTAGAGTATGATCATATTGTCAGTGAATTGGAAAGATCTTATTCTA
GCCTTCAAAGCATAAACAATAATGGAAGTGCATTTAGCAGTGCTTTCTCA
CTTCCACCAGAATCTTCATCACGTTCCACTGCGACAAATGGTGAAAAACA
TGATCCACATTTCGTTATGAATGAGCAATTTCAAGCCATTCAGCTGGCTC
AAATCTTGGAAAAAACAGCCTTTGAACTAAGGGTGTATTCAAAAAGAAGA
TTTCAACGATTCACCCCTAAAACAAGAAGAAAGAAGAAGTTGCCACCATG
TGTGACAAACAATTTGTTCCTTATCACCCTTGTATGGCAGTTGATTTGTA
TTGCGATGCTTGAGATTATTGATGTTTTATTCAAGCGTTTCGAAAGAACT
GAAAGGGAATACTATTACACTGTGATCAGCATAATGGTGGTCTTTCAATT
TGTCAATTTGGTGTTATCGATTTCTGCTACCATGAAATTGAAGAAGCAAT
ATATCCACAAGACAGCCAGTATGAAGTTCATGTTGCAATCTTACGCTTCC
ACAGTTGTCCTCTTCGCTGGATTATACACCTTTGTGGCCAAAATAAATCC
TCATTACTTCAGTGGGTTGGAGAAGGTTAATAGAGGAGACTTTCGATCAG
TCTTGTTGTTCGCCAAACTGTTCTTCACGTCAATATCCACTGGTACACTT
TGTGGTGCTGCAAAAGTGACAGCTGTACACTTCTCAACAGAGTTCATCAT
GGCACTTCAGATGTTGTTGAGCTTCATCTACTTTGCATCCATCCTTTCAC
AAGTCTTGAGCCCTGGAGATGGCAAATCCAAGGACGTCATGTACAAGATG
TTGCTTGAACAGAACGAACAAATGCTCAGCCATGTCACTGCGAAAAAGAA
GAGCAAATCGCACAGTGAAACCATCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001946XLOC_001946Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003501-exon-sc0000028-1575043694:718285..718636TCONS_00003501-exon-sc0000028-1575043694:718285..718636Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1575043694:717930..717993TCONS_00003501-exon-sc0000028-1575043694:717930..717993Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1575043694:715240..715320TCONS_00003501-exon-sc0000028-1575043694:715240..715320Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1575043694:714932..714992TCONS_00003501-exon-sc0000028-1575043694:714932..714992Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1575043694:713600..713715TCONS_00003501-exon-sc0000028-1575043694:713600..713715Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1575043694:713247..713352TCONS_00003501-exon-sc0000028-1575043694:713247..713352Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1575043694:712544..712599TCONS_00003501-exon-sc0000028-1575043694:712544..712599Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1575043694:712019..712172TCONS_00003501-exon-sc0000028-1575043694:712019..712172Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1575043694:708860..711617TCONS_00003501-exon-sc0000028-1575043694:708860..711617Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1510915933:718285..718636TCONS_00003501-exon-sc0000028-1510915933:718285..718636Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1510915933:717930..717993TCONS_00003501-exon-sc0000028-1510915933:717930..717993Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1510915933:715240..715320TCONS_00003501-exon-sc0000028-1510915933:715240..715320Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1510915933:714932..714992TCONS_00003501-exon-sc0000028-1510915933:714932..714992Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1510915933:713600..713715TCONS_00003501-exon-sc0000028-1510915933:713600..713715Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1510915933:713247..713352TCONS_00003501-exon-sc0000028-1510915933:713247..713352Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1510915933:712544..712599TCONS_00003501-exon-sc0000028-1510915933:712544..712599Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1510915933:712019..712172TCONS_00003501-exon-sc0000028-1510915933:712019..712172Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1510915933:708860..711617TCONS_00003501-exon-sc0000028-1510915933:708860..711617Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1491911889:718285..718636TCONS_00003501-exon-sc0000028-1491911889:718285..718636Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1491911889:717930..717993TCONS_00003501-exon-sc0000028-1491911889:717930..717993Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1491911889:715240..715320TCONS_00003501-exon-sc0000028-1491911889:715240..715320Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1491911889:714932..714992TCONS_00003501-exon-sc0000028-1491911889:714932..714992Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1491911889:713600..713715TCONS_00003501-exon-sc0000028-1491911889:713600..713715Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1491911889:713247..713352TCONS_00003501-exon-sc0000028-1491911889:713247..713352Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1491911889:712544..712599TCONS_00003501-exon-sc0000028-1491911889:712544..712599Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1491911889:712019..712172TCONS_00003501-exon-sc0000028-1491911889:712019..712172Clytia hemisphaericaexon
TCONS_00003501-exon-sc0000028-1491911889:708860..711617TCONS_00003501-exon-sc0000028-1491911889:708860..711617Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003501-proteinTCONS_00003501-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000028supercontigsc0000028:708860..718636 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0273369	2.15139	0.466038	0.276077	0.00368231	0.128062	2.53379	0.0625228	2.17226	0.0391422	2.6451	1.68996	3.62363	3.24528	2.60705	2.61705	3.59126	0.634161	0.138258	2.79569	3.39318	2.54484	3.11234	4.19872	2.90813	3.98935	0.0188189	1.56071	5.14359	0.184186
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003501 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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