TCONS_00003670 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003670
Unique NameTCONS_00003670
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4059

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003670 ID=TCONS_00003670|Name=TCONS_00003670|organism=Clytia hemisphaerica|type=transcript|length=4059bp
NTATCCTATGCTTACGTGGATCGAGAACTGTTAGGAAATTGAACATTGAT
ATGAATGAGATTGAAATTCATGAATCTACTAGgagaaatttttagtcaat
CTCTTTTATTATTCGTcgattttgagattattttttttcagacttttGCA
TTCTCGTTAACCCCTTGTTTTGCGCCCGGCGTGACCGCAAGGTTGTGCCA
CTATCCTTATGATGTGGATTTGTGATACTTGATTTGTTTGCCtcttatta
ttcgtttttaactaatttagtcttataatatttatatttattctaATGTA
TATCTGGTACAGGCTGTCctttaaaagtgacgtcaaaaaagacaACTCAA
GAAGACCCTCCAATGCGACgttgaaaaagaagatgctaaattgttttcaa
aattgacGTCAGGGTCAACGGTTTCGAAATTTtatatttcgaaaattttt
agcCGAGAAGAGAAAAGTGGACAAGACGTCGAAATTatcatctattgttt
aattgttttttccAATTTATCTTGAAACAAGCATTTTCAATGGCTACAAA
ACCAACGCTCGTGAAAATTCACTCAAATGTCAAATCATCATCACCGAATT
CGACCATAAAACGAACGCCCTCCAAAATGACCCCCTCgaaaaacaagaag
aaacaGCCACAAACTCCATCAAGACTCATAAAAGAGTTGGAGATAGATTG
CGTGCAGCAGAATGTAGCAGTCATCGGAAAACGAAAGTGTCACCAGAAAG
CGcgaaaaaacataaacaaccAGATGACTGAAGAGAGGCATACATCAAGT
CAGGTACCGAAACACGATCAAACCATCATCGAAGAAATCAACTCTAAGAG
GTCATCATACGTCAACGCTCGCAAACAAATCACTGACCAAACACGTTTCA
TGAAGTATAGTATTGTTCCCAATGACCTATATGAAAACGTGATAACAGAA
GATGTGCAGCCAAGAAGTCACCAAGAGCCAGTTTATGACGAGCAAGCAAC
CCTTACACCATTCGTCGAGGAAACTCCGAAACATACACCGAAAAGTCAAA
AGAATGGTCACAACATCACTGAGGAAAGGCTGCCATACTTCACCAAATTG
GACCAAGCCTCTTCACTCGCGTCCAAGGCTGAGGAAGAGAATGCAATTTG
GGAAGAACAGGCACCGGAAAAACCGGTCGCTGGAAAATTTATTCATCCTT
GGGAAAGACTTATCAAAAAGAAGAGAAACCAATTTTCAATGTGTGATACC
TCTTTGCAAACAATAATTCCATCAGCCGAAAGAGTCGGTCCAATACCAAA
TTCCCCTAGAAATAGTAGCATCTCCTACAACAAGCAGCATACCAAGCTGG
CAAATTCAATCGAAATAGAAAGTACAGGAAGTGTCTTTTCACCGCTCTCA
ATAAAGATGAAGTCTGAAAGTTACCAATATCAATACATTCGGCATCTAAC
TGCTGCTCGAATGATTGTAAATCAAGAGAATCTCACGAAAAGTGAAAAGG
CAACAGTCAAGCTTGAGGCAAAATTGCAACGATTGGACATGAAACTTTTT
CAACTACTTCACATTGAGAGATACAAGAAACGTGGTGTTCCCAACCATCC
GAGCACCAGAGGGAAGTTCCAACCTGGTCAGAAAGCACTCCTTGATGAAT
GGTACAGGGTAAAGGATGGAGAGAGGATCAAAGCAGGAGTGACTGTAGTG
CAGGCTGTAGAAGAACAAATGGGTGAGGAAATCGAAGAACAAACATCAAA
CCAGAGTGATGATAAAGATCAATCGATACCAGAACAAGAATCACCTACAC
CATTAGTTCTGGACGAGGAACTTCAACCATTCCCAATAAAAGAGGAAGAC
TCATTGTATGCAGCATTTTTAAAAAGTCGACCACCACCTATAAGAAAAGC
AAATTCCTCGTCACTGGCAGCTTTGGGAAATTAAATAGAAAATgtgaaaa
aggaaaacaaagcCTACGGGAAAGAGGAAAACCTATCCTGGTCAAAAGAA
TATGAAAAAGTTTTGTCGCGGAAAAAGAAGGAACCTCAAACTTCACCAAC
ACAAGAGGAGAACCCATCAAAAGATGATAAGACGCcaggaaaaataaaga
aaaagacaaagacAAGGAGAATCGGAGGATATCAGCCTAAGGCTAAAACA
AAGTCCAACCAAGTCAAAAGTTGGTGGTCCAAAAGTAGAAAGAAATTACA
GAAAGAGTTTGCAAAGAAGAAGAAACGTCCGGTTGGAAGGCCTCCTGGTC
CTCAAGGAAAACCAACCACACTGGAGACAGAGGAGGTGGAGGAAAAAGAA
AGAGAATTGAAAGAAGAACTCAAAACAGGATCGAACCTTATTAAAGACTT
CATGGTTGAAGAGCTGGTCATGATAGATAGATTGATGAATTCTGAAGAAT
ACGAGACAGAAGAAAATGATGAAGCAGCTAAAATCCTTTGTGAAGAAGAA
CCTATTTTGAGTGATATCGTCAACAAATCGCTAAATGCCACGTTGGAAGA
GGACGAGCAACCTCAAAAATCGAGCGACGATGAAAAACTCAATGTCGgtg
aagaaaaggaagaaagaaATCAAACTACTCAATCTCGTGTTGTACAGCGT
AACCATTGGTGATAATTATTTCTGAGGAAAATATAAAACTGATAAACTAA
AAAATACGTTTTCTACTGTTATACAGTATTAGACTGAAATATTAAACTCA
TTAATTAGtattgaaaatattaaattataCAACCTTTTATTAACTAAAAT
CAAGCCAGTATTAAACTGATTAATTTACGCAAGTatttctagaaaattat
tttagaactttagGCTTTCACTTCAATAGATTGTCTTGTTAAAGATCTTT
ACTGTCTTATGATATTAAAATTTGACTGTGTAGTTCTTGAACTCAACCTT
TTGGTGACAAAGTATAAGCTCaagtaaataataaaataaactcGCTATAT
ACAGCAAATCAATTCTATTAGTTCGTGTAATTATTATCTGCGTGTGGGAG
TGTGATGTTTTGGCGGTACTTGCCATCTTCGATCAGAGTTTATGAAATAG
TTGTACCTTAATGGTAGCATTAGGTTGATGCAGGTCAATTtataattcaa
tgaaatttgCCTTAAAATGCTTTTACCCATATTGAAAAGTGGTACCATTA
GGGTAcctctttcaaaaaaaactccgaaaaaagattttgtttggcAGTTA
TCCAGTACCTTAGTTGAGGGTATATAGAGGTTCTTTTGGACGCCTGACAA
CTATTTCCAGAGTTGAATTTCTTGGTTCATTCGACAGAAGAATGTGCTTA
GAGACTATTGACAAGGGGTACACAAATTAGTCCCGGCAACAGTTTTTATG
ACCTAAAGACTGACGTTGCAGTTCAACtgtaaggggggggggtgcgtAAA
AGATCAAAGAATTCGACAAAATTGATTAATACCATCGGAAAGAGTATGAA
ATTCTGAGCAGAACAAGTTTActtaagtctgtctcaatataatctgcagc
ggagacaaaaaaatAGAACTCAAAACTAAATAGCGggtttgtgctcgttg
aaaagatattcaaggTCCACGATCAGGTCAATTCAAATCGACCAGTTGGC
CGACCACAATGCGTACAAAGCAGACGATGCACCTACCATCGCATGTGATT
GGCTTAATGTGACGAGTCCCAGGTTGAACCGGCAGCTCCAACAGTACCAG
TAGACAATTTCCACTtaagcgacttttatcgaaaagtgaagcctaggttt
ggaaggatttcctaccaaagtcacgtgactaaaNATttgcgacttttatc
gaaaagtgaagcctaggtttggaaggatttcctaccaaagtcacgtgact
aaaatatgcaatttcacgggtttgagagatgtgaaatagcgtttaccgcc
tactttttttgatctcgcgctccaaaaacaattaaaatgctagatcctat
ctgcgtgcacgaaatttaaaaagtcaattttttgcttcactttttgcgga
acgtgcgtttgagagcgcgctcaaacgcgcgttccgcctcctttggcaag
atctgcgNt
Run BLAST on NCBI

protein sequence of TCONS_00003670-protein

>TCONS_00003670-protein ID=TCONS_00003670-protein|Name=TCONS_00003670-protein|organism=Clytia hemisphaerica|type=polypeptide|length=464bp
MATKPTLVKIHSNVKSSSPNSTIKRTPSKMTPSKNKKKQPQTPSRLIKEL
EIDCVQQNVAVIGKRKCHQKARKNINNQMTEERHTSSQVPKHDQTIIEEI
NSKRSSYVNARKQITDQTRFMKYSIVPNDLYENVITEDVQPRSHQEPVYD
EQATLTPFVEETPKHTPKSQKNGHNITEERLPYFTKLDQASSLASKAEEE
NAIWEEQAPEKPVAGKFIHPWERLIKKKRNQFSMCDTSLQTIIPSAERVG
PIPNSPRNSSISYNKQHTKLANSIEIESTGSVFSPLSIKMKSESYQYQYI
RHLTAARMIVNQENLTKSEKATVKLEAKLQRLDMKLFQLLHIERYKKRGV
PNHPSTRGKFQPGQKALLDEWYRVKDGERIKAGVTVVQAVEEQMGEEIEE
QTSNQSDDKDQSIPEQESPTPLVLDEELQPFPIKEEDSLYAAFLKSRPPP
IRKANSSSLAALGN
Run BLAST on NCBI

transcript from alignment at sc0000030:748760..758981-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003670 ID=TCONS_00003670|Name=TCONS_00003670|organism=Clytia hemisphaerica|type=transcript|length=10222bp|location=Sequence derived from alignment at sc0000030:748760..758981- (Clytia hemisphaerica)
NTATCCTATGCTTACGTGGATCGAGAACTGTTAGGAAATTGAACATTGAT
ATGAATGAGATTGAAATTCATGAATCTACTAGGAGAAATTTTTAGTCAAT
CTCTTTTATTATTCGTCGATTTTGAGATTATTTTTTTTCAGACTTTTGCA
TTCTCGTTAACCCCTTGTTTTGCGCCCGGCGTGACCGCAAGGTTGTGCCA
CTATCCTTATGATGTGGATTTGTGATACTTGATTTGTTTGCCTCTTATTA
TTCGTTTTTAACTAATTTAGTCTTATAATATTTATATTTATTCTAATGTA
TATCTGGTACAGGCTGTCCTTTAAAAGTGACGTCAAAAAAGACAACTCAA
GAAGACCCTCCAATGCGACGTTGAAAAAGAAGATGCTAAATTGTTTTCAA
AATTGACGTCAGGGTCAACGGTTTCGAAATTTTATATTTCGAAAATTTTT
AGCCGAGAAGAGAAAAGTGGACAAGACGTCGAAATTATCATCTATTGTTT
AATTGTTTTTTCCAATTTATCTTGAAACAAGCATTTTCAATGGCTACAAA
ACCAACGCTCGTGAAAATTCACTCAAATGTCAAATCATCATCACCGAATT
CGACCATAAAACGAACGCCCTCCAAAATGACCCCCTCGAAAAACAAGAAG
AAACAGCCACAAACTCCATCAAGACTCATAAAAGGTACTAAGAAATGATA
ATTTATTTTTTTACGATATTCAGTAATAGATAATCTTAAATTGATTTAAA
GAAGTTAAAAATTCCCAAAATCCTGATAATCTTAGCTTAATTTATCATTT
GGCGCTGGGAAAAATTTTATGGGAAGACTGTGACATGCTACTTTATGACT
TTATTTTGAGTAGTTAAAGGAAGAAATTTTGACGGGAGTTTAATTTGGCG
GATGGCGGAAAAATTAAATTTGGAACTTTATTTGGCAGATTTGGCAAATT
TTCTTTCCGCCAAAATTACTTATATACCTATTGAATCTTTTTATCTACAG
AGTTGGAGATAGATTGCGTGCAGCAGAATGTAGCAGTCATCGGAAAACGA
AAGTGTCACCAGAAAGCGCGAAAAAACATAAACAACCAGATGACTGAAGA
GAGGCATACATCAAGTCAGGTACCGAAACACGATCAAACCATCATCGAAG
AAATCAACTCTAAGAGGTCATCATACGTCAACGCTCGCAAACAAATCACT
GACCAAACACGTTTCATGAAGTATAGTATTGTTCCCAATGACCTATATGA
AAACGTGATAACAGAAGATGTGCAGCCAAGAAGTCACCAAGGTACTTACA
TTTGTATTTTCGAGTTCAACTCTCTGAGATGACATCGACTCTTATTGATT
ACTCCAATTTTTCTACAATCGAAGTCATAATATTTGAGAAAAAAGGGAAA
TTCCCACGAAATCTTACAACCACAAACGATTTGGAAGCGCTCTAAATTAG
GTTGGACGGGTAGAGTTTTAACTCTGAGTTTTAACCCTAGACTTAAAACT
NAAACGATTTGGAAGCACTCTAAATTAGGTTGGACACTAGACTTAAGACT
TAGGACTTTAGGATCTGAGGAACTAAAAGTCCAAGAATGGTCCAATAGGG
CTCAGAATATAGCCTGGAAGTCTATAAACCCCTCCCGAATTGAAATATTC
AAATAAATTCATCAATTTGTTCAAAAGCGACTTTTACGCCCGTGCTTGAT
CAGCATGAATGTTTGAGAAAGGCCATTTCATAGTCCCCGCAATGCGTAAT
TAGAACTCTGCACTAATGGAAAGTACTAATTGGTTCAAAATTTCAATCAT
TTTTTACGTCTGGCCAACAGGAAAAGGTGTCACCAGAGCGAAATCAGTCC
TGGTTGTCCATGATTGCGAGATGGTCAATGGAAAAATCCGTCAGCTTGAA
ATTAGGGGAATCTAGAACTGAGACGATGAGCTGCTCCCAGAAGTCNATGG
AAAAATCCGTCAGCTTGAAATTAGGGGAGTCTAGAACTGAGACGAAGAGC
TGCTCCCAGAAGTCAAATTGATGATTAACATATATTGGTGAAATTAGAAA
CTACCTATTCAAATTTCTTACGATCTTCTTGTCCATTTAGAGCCAGTTTA
TGACGAGCAAGCAACCCTTACACCATTCGTCGAGGAAACTCCGAAACATA
CACCGAAAAGTCAAAAGAATGGTGAGGATTTTGAATTTTAATTGACCTTT
TCATAACTTACGTCACGTATAATTCCTGCCTCGTCTTGGAACGGTTACCA
AGGTGATTATCTTCCTTGAGACATACAATAATTTCCCAATGAAAAGTATA
CACCTCTAAGAAATTTCGTTGGTTGAGTTTTCATAGCATAATTTCCAAAA
CGAGGCTCAAATTGTTCGAAGTCTTCTAAGGAATAAGCTCCGACAATCTA
AGTTTTAAGACTTAGGACCTTAGGACCTCAGGATCTAAAAGCTCAAAAAT
GTCCCAATAAGGCTGAGAATATAGCCTGCCCAAATCGGAAATCCAATGAA
ACAAAGTAGAAGTATTGAAACTGCAATTCTCGCCCGACCTTTAAATTTTC
AAAACCAAAAGTGCCGATATGTTTCGGCGCCGATTGTAGAAACAATTTTT
AACAGTAGTTTCTCTAAACTGGTCGCAGAAAGAACACGAACACTTATCCT
CTGAAAATGTTAACGTGCAAAGGACACTATGATGAAGACTGTATTATCAT
CACAATTGTTTTAGCCTCAAATCAACATCAAGAAAGTGAACGACCGAATC
AAAGACAAGAAAGACCAACAAGAAACGTCGAATTTCAACTTGGATACTTT
ATGGATCAACAAATCGAATTCCTGAACAACAAGAAAGTTGCTCGTTGTGA
TATCATCGTTTTCAATAAAAAACCCGTGAGGTTCTATTGTGTTTCTGACT
GTGTCGACCCAACGACGGCGATAGATTTTGAATTTTCGATACTTCATCGT
CAATGGATCACAACTCAATTTAAAATTTTAACTAAAGATCTTAAGGAAGG
TCGCGTGTTTCGAGTTATCCCTGTTAACTGGGATCGACGTACAGACAAAG
TCAAATGGATGAGAAGATCAAAATGTTCAAGAGAAATAATTTACGATTCA
GAACCAAACTGTGAATACTTGCTTCATCGGATTCGTAGATCTGTCTACCA
GACAGGGTGCAAACCATTGATTGTTGATAATCTGTTTGGACTTTGGACTT
CAGAAGAAATTAACCAGTGCAGCATTGAAAGCTTTGGCGATGAATCAGAA
CTAGATTTCTCCTCAAACTGTTCCTCGTATGCATGCACTCCCACCAAACT
TTCTGTCACTGGCTCCCCTATAGCGACACCGACACCAATGAGCCCGATTG
TAAAAGCAAGAGAGCGAATGCTAAACCTTACAAACAAATCAAACCCGCCA
TCTCCTTTGAGGAGCCGCATGAAACGCAAATATTCAATCAACTCTCCTAT
TAATCAAAGTCCGAAACTTTCGACTCTGAAAATGTCACCACTAGCCAAAC
GCTTAAAGACAGAACATAGCACTCCTCGCGCATGCGTAAAGCAAACCAAA
GAGAAAAATGGATCGATTAATCGAACCAAATGTGATAAAAAACTCCCTCC
GTCTCCTCTGATTCACGAGTCAACTCTTCCCAAAAGACAATCAGCGGTCA
ACGCTCGTAGAGAAATCAATTTCCAATTGGCAATCGACGAAGATAATATC
GAAGTTTACGATATGAAAGAAAAAGAAAGACAACATTGTTGAAACAGACA
CAATTGAGTAAACTAAATTAATCATTAATTCCCCTATGCCAATAGCCCAA
TTAGGATCTTCTTCTTCGGATTAAACTTTGTTCTCCAGGGGACGTTACAA
TGTTAATAGAAAGGATGGTATCCGTACCAAAATGGACCTTGACATGACAT
CCTTTAACGGATTAGTACTTCTACACACATTACGGTTATTGTTTTTACTA
AATTTGGAATTCAAAGATAATATTTTTGGCAGCTCTGACTTAAATTGAAT
TTTATTTGAATAGAATATTTCGAGGATACTACAAAGAAATAATACTTATA
TAAACATTTTTTGCTTTCTCATTGAACTTACATTCCTCTACAATCAGGGT
CGAAATATATCGGGAATTTTGGTTGAAATTCTCGTTTTCAGCAATTTAAA
GTTCGGGCGAAAAAGTCGCTTTTGGGCAAATTAATAAATTTATTCGAATA
TTTAAATTCGAGAGGGGTTTATAGACTTCCAGGCTATATTCTTAGCCTTA
TTGGACAATTCTTGGACTTTTAGTTCCTCAGATCCTTATTTAAACTCAGA
GTTCAAACTCTACCCGTCCAACCTAATTTAGAGCACTTCCAAATCGTTGG
TGGTTGGTAAGATTTGGTGAGATTTTCTTCTCAAATATTATGACTTTGAT
TGTAACAAAACTAGTAACGATGACAAAATTTCAAAAAATTGTCGCCTCGC
AAAAATTAATTCTCGCTGAATTTAGATTCTTTTGCGATTTTTGCTCTTCC
CCAAATTAGGTTACCTTCATTTTTCCATTTTTCAGAGTTTTTTATTTCCA
CTACTCCAGAATATTTTTTTAAGAATTACAAAACCGCTCTCTAATTCTTT
AATGGGATAAAATTTCGCGGGGATTAAATTTCGCGGTTGGGCCTATCCTC
GCGAGGACTTAATTTCGCGGGTGGCACTATTAGGTGGCAATATTTTCACG
ATTTTGAATCTTTATACTGTCAAATCATGTATATTGGTTGTTGAAATACA
CATTATTTGCGCTTTTTTGATGCAAATAACCATTCAAAAAGTATTTATTT
GACATATTTTGAGTTTTGATTATAAATATTTCGCGGATGAGGCCCTTCCA
AATTTCCATTGGGATTTAATTTCGCGGATTTTCGCGGATGACACCCAAAT
CCGCGAAATTTAATCCCCCCGAAAGTTTATCCCATTAAAGTATTCTATCA
AAAGTTATATAACTTGTAAAAGTCATACCAAGAAGTTATAGTTTTTTTTG
TCTCCGTTACAGATTATACCGAGGCAGATTTTAGATACATTCACACTTGT
CCAATTCCAAATTCAACTTCAAATTGGGTTTTCAAAGAATGAAAACAACT
TCAAAACTGTCAATTTTTTTTATTTAAACTACTTTATAGGTCACAACATC
ACTGAGGAAAGGCTGCCATACTTCACCAAATTGGACCAAGCCTCTTCACT
CGCGTCCAAGGCTGAGGAAGAGAATGCAATTTGGGAAGAACAGGCACCGG
AAAAACCGGTCGCTGGAAAGTATGTGGAATTTTTCCATAGAGAGAATTGT
CGTGTACCAGTGGAAGAGGCCTATAGTACACTTGCAAGAAAAGTTGATAG
CAAATGGTTCCAGTTGGAGTTCTTAGCAGATTTGATTTAAAGATTTTGTA
GATTCGAGTCCCCTGCTCAATTGCAGTATTTATTAACTAGATCATGCAAC
ACGGCAACAGCTGTCTCAATCAACTTTTTAATTGTTTGAATATGCTTTTT
TCATCAATAGCGTCTAATCACCAATTTCTGGACAAATAGAAATTCTAAAA
ATTTTAAAAGAGATTTTCCCCACCCAATCGAGCTTTCCCACTCCATCAAG
CTTTCCAGCTCAAAGAAATCTCATTTCATTTCCAGTGTAGTCGAAGCAAA
GTTTCTCGTTTCAGACAGAACTTGAAATTTAATCGAATCAAACTCAACGA
ATTGCTCTGATTCTTTTACTGAATTTTTTTGTACCTTGCTTCACTAACTT
TTGATCATATTGTCATTCCGCCTTAGATTTATTCATCCTTGGGAAAGACT
TATCAAAAAGAAGAGAAACCAATTTTCAATGTGTGATACCTCTTTGCAAA
CAATAATTCCATCAGCCGAAAGAGTCGGTCCAATACCAAATTCCCCTAGA
AATAGTAGCATCTCCTACAACAAGCAGCATACCAAGCTGGCAAATTCAAT
CGAAATAGAAAGTACAGGAAGTGTCTTTTCACCGCTCTCAATAAAGATGA
AGTCTGAAAGTTACCAATATCAATACATTCGGCATCTAACTGCTGCTCGA
ATGATTGTAAATCAAGAGAATCTCACGAAAAGGTACGCTTTTAACCCCTA
ACAAACATTGGCAGAGTCTGGCAGGGTCAAGGTGTGAGCGAACATGTGTA
AAAATTAAATCTAATTTACTTCAAGGGTATCCGACCATAATATTTCGAAA
AACATTGTGAAGTAGGGTAACCGTGAAGTAGTAGAAACGTAAATGTACCT
ATCAAATCTTCACAATAAAATCTATTAGGTTCGAGTTACAGTAGTCAAGA
AAAAACAACTTTCGAATCACTCCAGTATTTAATGTCATTTGATTACTGGT
AAACTAGATCCAAAATTAATTCTGAGTTTCAGATCACATAAAATTACTAA
CAAAAGTTTCATTTTCAGTGAAAAGGCAACAGTCAAGCTTGAGGCAAAAT
TGCAACGATTGGACATGAAACTTTTTCAACTACTTCACATTGAGAGATAC
AAGAAACGTGGTGTTCCCAACCATCCGAGCACCAGAGGGAAGTTCCAACC
TGGTCAGAAAGCACTCCTTGATGAATGGTACAGGGTAAAGGATGGAGAGA
GGATCAAAGCAGGAGTGACTGTAGTGCAGGCTGTAGAAGAACAAATGGGT
GAGGAAATCGAAGAACAAACATCAAACCAGAGTGATGATAAAGATCAATC
GATACCAGAACAAGAATCACCTACACCATTAGTTCTGGACGAGGAACTTC
AACCATTCCCAATAAAAGAGGAAGACTCATTGTATGCAGCATTTTTAAAA
AGTCGACCACCACCTATAAGAAAAGCAAATTCCTCGTCACTGGCAGCTTT
GGGAAATTAAATAGAAAATGTGAAAAAGGAAAACAAAGCCTACGGGAAAG
AGGAAAACCTATCCTGGTCAAAAGAATATGAAAAAGTTTTGTCGCGGAAA
AAGAAGGAACCTCAAACTTCACCAACACAAGAGGAGAACCCATCAAAAGA
TGATAAGACGCCAGGAAAAATAAAGAAAAAGACAAAGACAAGGAGAATCG
GAGGATATCAGCCTAAGGCTAAAACAAAGTCCAACCAAGTCAAAAGTTGG
TGGTCCAAAAGTAGAAAGAAATTACAGAAAGAGTTTGCAAAGAAGAAGAA
ACGTCCGGTTGGAAGGCCTCCTGGTCCTCAAGGTACACACTTTTTAGAAG
ATTAGCCGAGAAACAGATATTGAAAATATTGTCAACAGAAACTTTTTGAA
AATACTAAAATCAAGCATGCTCATTTCAGTACAGCTCTAAGATCTCAGCT
TAAGAACGTAATTGATCAACTCTTAAAATAAGCTTTCGAAAATTACCTTA
AGTGGATTAAATTTCGCGATTTTCACGAATCTCGGTTAACCCGACCCCCC
CCCCTAGGAAGATGAAAGAAATTGGATGCAAAAGAGACCGATAGGCAAAA
TTTTGTCCACTAGAAATTTTAGATTCTTGCAAAATTTGTTTAAGGTGTCA
GCCCAAGTTTTGAGTAGGAAAAAATAGTAGGAGAAATGTTAATCTTTTCA
GGAAAACCAACCACACTGGAGACAGAGGAGGTGGAGGAAAAAGAAAGAGA
ATTGAAAGAAGAACTCAAAACAGGATCGAACCTTATTAAAGACTTCATGG
TTGAAGAGCTGGTCATGATAGATAGATTGATGAATTCTGAAGAATACGAG
ACAGAAGAAAATGGTGAGTCATATATCGTCGTTCACGTGACTGAAGATTC
AATCTCAAAATTAGTACCTTACAAAATTTAAAGTTTTACTGTGATCTTTG
AGATTCAGATTGCCCTTTTTTCATGTAGACGAATAGTCAATGTTTTCATA
CGACAAAAAGGCCTATCTCAAAGGCAGAACAGGATTGCAAGATTTCCAAA
TTTTGAGATTAAACCTTTAGTCATGTAGACGACGATACGTTTCCTTTCAA
GCCGACAATCGACGTTCATCTTGTGTGTATAATGTGGAGGGGTATATGTA
GAATTCCGTCTTTTTAGAGTTTTTCTTCAAGAATGCTAAAATTCTGTTAA
GGCAAAACAAAAAAGTAAGAAAATATAATTCGTCAGAAGATCGATGAAGC
TGGCTCGTCACCCTTCTATGGTTTATCTAACGTAACGCTGGCAACACGCC
ATCGAATATTTTGAGCCGTTAAACCTGGTATGAATAAGAAATTGTCTGAG
CTAACCTTCAAAACAATGAACTTATCAACTACTTACCCTCAACCATGTCC
TAAAAGATACAAAATATTCATGATACGTTTTTTTAGGCGAACTTAAAAAC
TCAAATTATTATCATTTGCTTAGAACATTATTGCTGGAGAAATAAACCAA
CATTAAATTTCCATACAGGGGGTGGACGAACCTTTTGAGGTCAAAAAACC
CTTGAAATTTTGCTAGAAATTACCCCTGGAAATGTTCGTCCACCCCATGT
CTGGATATAAATGAAATGATCCATGTCTTTTGCTGATTTAATCATCTCTG
ATACCTTAGTCCTAAAAATTCTAACAAAGGCTGAAGACTGTTGAAGACTA
GTTATAAACAAAACTCTTTCAACTTTCTCAGATGAAGCAGCTAAAATCCT
TTGTGAAGAAGAACCTATTTTGAGTGATATCGTCAACAAATCGCTAAATG
CCACGTTGGAAGAGGACGAGCAACCTCAAAAATCGAGCGACGATGAAAAA
CTCAATGTCGGTGAAGAAAAGGAAGAAAGAAATCAAACTACTCAATCTCG
TGTTGTACAGCGTAACCATTGGTGATAATTATTTCTGAGGAAAATATAAA
ACTGATAAACTAAAAAATACGTTTTCTACTGTTATACAGTATTAGACTGA
AATATTAAACTCATTAATTAGTATTGAAAATATTAAATTATACAACCTTT
TATTAACTAAAATCAAGCCAGTATTAAACTGATTAATTTACGCAAGTATT
TCTAGAAAATTATTTTAGAACTTTAGGCTTTCACTTCAATAGATTGTCTT
GTTAAAGATCTTTACTGTCTTATGATATTAAAATTTGACTGTGTAGTTCT
TGAACTCAACCTTTTGGTGACAAAGTATAAGCTCAAGTAAATAATAAAAT
AAACTCGCTATATACAGCAAATCAATTCTATTAGTTCGTGTAATTATTAT
CTGCGTGTGGGAGTGTGATGTTTTGGCGGTACTTGCCATCTTCGATCAGA
GTTTATGAAATAGTTGTACCTTAATGGTAGCATTAGGTTGATGCAGGTCA
ATTTATAATTCAATGAAATTTGCCTTAAAATGCTTTTACCCATATTGAAA
AGTGGTACCATTAGGGTACCTCTTTCAAAAAAAACTCCGAAAAAAGATTT
TGTTTGGCAGTTATCCAGTACCTTAGTTGAGGGTATATAGAGGTTCTTTT
GGACGCCTGACAACTATTTCCAGAGTTGAATTTCTTGGTTCATTCGACAG
AAGAATGTGCTTAGAGACTATTGACAAGGGGTACACAAATTAGTCCCGGC
AACAGTTTTTATGACCTAAAGACTGACGTTGCAGTTCAACTGTAAGGGGG
GGGGGTGCGTAAAAGATCAAAGAATTCGACAAAATTGATTAATACCATCG
GAAAGAGTATGAAATTCTGAGCAGAACAAGTTTACTTAAGTCTGTCTCAA
TATAATCTGCAGCGGAGACAAAAAAATAGAACTCAAAACTAAATAGCGGG
TTTGTGCTCGTTGAAAAGATATTCAAGGTCCACGATCAGGTCAATTCAAA
TCGACCAGTTGGCCGACCACAATGCGTACAAAGCAGACGATGCACCTACC
ATCGCATGTGATTGGCTTAATGTGACGAGTCCCAGGTTGAACCGGCAGCT
CCAACAGTACCAGTAGACAATTTCCACTTAAGCGACTTTTATCGAAAAGT
GAAGCCTAGGTTTGGAAGGATTTCCTACCAAAGTCACGTGACTAAANATT
TGCGACTTTTATCGAAAAGTGAAGCCTAGGTTTGGAAGGATTTCCTACCA
AAGTCACGTGACTAAAATATGCAATTTCACGGGTTTGAGAGATGTGAAAT
AGCGTTTACCGCCTACTTTTTTTGATCTCGCGCTCCAAAAACAATTAAAA
TGCTAGATCCTATCTGCGTGCACGAAATTTAAAAAGTCAATTTTTTGCTT
CACTTTTTGCGGAACGTGCGTTTGAGAGCGCGCTCAAACGCGCGTTCCGC
CTCCTTTGGCAAGATCTGCGNT

Coding sequence (CDS) from alignment at sc0000030:748760..758981-

>TCONS_00003670 ID=TCONS_00003670|Name=TCONS_00003670|organism=Clytia hemisphaerica|type=CDS|length=1395bp|location=Sequence derived from alignment at sc0000030:748760..758981- (Clytia hemisphaerica)
ATGGCTACAAAACCAACGCTCGTGAAAATTCACTCAAATGTCAAATCATC
ATCACCGAATTCGACCATAAAACGAACGCCCTCCAAAATGACCCCCTCGA
AAAACAAGAAGAAACAGCCACAAACTCCATCAAGACTCATAAAAGAGTTG
GAGATAGATTGCGTGCAGCAGAATGTAGCAGTCATCGGAAAACGAAAGTG
TCACCAGAAAGCGCGAAAAAACATAAACAACCAGATGACTGAAGAGAGGC
ATACATCAAGTCAGGTACCGAAACACGATCAAACCATCATCGAAGAAATC
AACTCTAAGAGGTCATCATACGTCAACGCTCGCAAACAAATCACTGACCA
AACACGTTTCATGAAGTATAGTATTGTTCCCAATGACCTATATGAAAACG
TGATAACAGAAGATGTGCAGCCAAGAAGTCACCAAGAGCCAGTTTATGAC
GAGCAAGCAACCCTTACACCATTCGTCGAGGAAACTCCGAAACATACACC
GAAAAGTCAAAAGAATGGTCACAACATCACTGAGGAAAGGCTGCCATACT
TCACCAAATTGGACCAAGCCTCTTCACTCGCGTCCAAGGCTGAGGAAGAG
AATGCAATTTGGGAAGAACAGGCACCGGAAAAACCGGTCGCTGGAAAATT
TATTCATCCTTGGGAAAGACTTATCAAAAAGAAGAGAAACCAATTTTCAA
TGTGTGATACCTCTTTGCAAACAATAATTCCATCAGCCGAAAGAGTCGGT
CCAATACCAAATTCCCCTAGAAATAGTAGCATCTCCTACAACAAGCAGCA
TACCAAGCTGGCAAATTCAATCGAAATAGAAAGTACAGGAAGTGTCTTTT
CACCGCTCTCAATAAAGATGAAGTCTGAAAGTTACCAATATCAATACATT
CGGCATCTAACTGCTGCTCGAATGATTGTAAATCAAGAGAATCTCACGAA
AAGTGAAAAGGCAACAGTCAAGCTTGAGGCAAAATTGCAACGATTGGACA
TGAAACTTTTTCAACTACTTCACATTGAGAGATACAAGAAACGTGGTGTT
CCCAACCATCCGAGCACCAGAGGGAAGTTCCAACCTGGTCAGAAAGCACT
CCTTGATGAATGGTACAGGGTAAAGGATGGAGAGAGGATCAAAGCAGGAG
TGACTGTAGTGCAGGCTGTAGAAGAACAAATGGGTGAGGAAATCGAAGAA
CAAACATCAAACCAGAGTGATGATAAAGATCAATCGATACCAGAACAAGA
ATCACCTACACCATTAGTTCTGGACGAGGAACTTCAACCATTCCCAATAA
AAGAGGAAGACTCATTGTATGCAGCATTTTTAAAAAGTCGACCACCACCT
ATAAGAAAAGCAAATTCCTCGTCACTGGCAGCTTTGGGAAATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002032XLOC_002032Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003670-proteinTCONS_00003670-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003670-exon-sc0000030-1575043694:758298..758981TCONS_00003670-exon-sc0000030-1575043694:758298..758981Clytia hemisphaericaexon
TCONS_00003670-exon-sc0000030-1575043694:757691..757981TCONS_00003670-exon-sc0000030-1575043694:757691..757981Clytia hemisphaericaexon
TCONS_00003670-exon-sc0000030-1575043694:756811..756891TCONS_00003670-exon-sc0000030-1575043694:756811..756891Clytia hemisphaericaexon
TCONS_00003670-exon-sc0000030-1575043694:753713..753842TCONS_00003670-exon-sc0000030-1575043694:753713..753842Clytia hemisphaericaexon
TCONS_00003670-exon-sc0000030-1575043694:752900..753205TCONS_00003670-exon-sc0000030-1575043694:752900..753205Clytia hemisphaericaexon
TCONS_00003670-exon-sc0000030-1575043694:751800..752563TCONS_00003670-exon-sc0000030-1575043694:751800..752563Clytia hemisphaericaexon
TCONS_00003670-exon-sc0000030-1575043694:751269..751430TCONS_00003670-exon-sc0000030-1575043694:751269..751430Clytia hemisphaericaexon
TCONS_00003670-exon-sc0000030-1575043694:748760..750400TCONS_00003670-exon-sc0000030-1575043694:748760..750400Clytia hemisphaericaexon
TCONS_00003670-exon-sc0000030-1510915933:758298..758981TCONS_00003670-exon-sc0000030-1510915933:758298..758981Clytia hemisphaericaexon
TCONS_00003670-exon-sc0000030-1510915933:757691..757981TCONS_00003670-exon-sc0000030-1510915933:757691..757981Clytia hemisphaericaexon
TCONS_00003670-exon-sc0000030-1510915933:756811..756891TCONS_00003670-exon-sc0000030-1510915933:756811..756891Clytia hemisphaericaexon
TCONS_00003670-exon-sc0000030-1510915933:753713..753842TCONS_00003670-exon-sc0000030-1510915933:753713..753842Clytia hemisphaericaexon
TCONS_00003670-exon-sc0000030-1510915933:752900..753205TCONS_00003670-exon-sc0000030-1510915933:752900..753205Clytia hemisphaericaexon
TCONS_00003670-exon-sc0000030-1510915933:751800..752563TCONS_00003670-exon-sc0000030-1510915933:751800..752563Clytia hemisphaericaexon
TCONS_00003670-exon-sc0000030-1510915933:751269..751430TCONS_00003670-exon-sc0000030-1510915933:751269..751430Clytia hemisphaericaexon
TCONS_00003670-exon-sc0000030-1510915933:748760..750400TCONS_00003670-exon-sc0000030-1510915933:748760..750400Clytia hemisphaericaexon
TCONS_00003670-exon-sc0000030-1491911889:758298..758981TCONS_00003670-exon-sc0000030-1491911889:758298..758981Clytia hemisphaericaexon
TCONS_00003670-exon-sc0000030-1491911889:757691..757981TCONS_00003670-exon-sc0000030-1491911889:757691..757981Clytia hemisphaericaexon
TCONS_00003670-exon-sc0000030-1491911889:756811..756891TCONS_00003670-exon-sc0000030-1491911889:756811..756891Clytia hemisphaericaexon
TCONS_00003670-exon-sc0000030-1491911889:753713..753842TCONS_00003670-exon-sc0000030-1491911889:753713..753842Clytia hemisphaericaexon
TCONS_00003670-exon-sc0000030-1491911889:752900..753205TCONS_00003670-exon-sc0000030-1491911889:752900..753205Clytia hemisphaericaexon
TCONS_00003670-exon-sc0000030-1491911889:751800..752563TCONS_00003670-exon-sc0000030-1491911889:751800..752563Clytia hemisphaericaexon
TCONS_00003670-exon-sc0000030-1491911889:751269..751430TCONS_00003670-exon-sc0000030-1491911889:751269..751430Clytia hemisphaericaexon
TCONS_00003670-exon-sc0000030-1491911889:748760..750400TCONS_00003670-exon-sc0000030-1491911889:748760..750400Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000030supercontigsc0000030:748760..758981 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.111987	0.179633	0.027199	0.148022	0.0577012	0.0927085	0.169734	0.360421	0.0794746	0.164147	0.0727307	0.147699	0.100322	0.163208	0.0369453	0.0662449	0.100751	0.0994175	0.0697684	0.0745412	0.0874105	0.127388	0.024747	0.090834	37.1517	15.2865	0.0949744	0.0657546	0	0.0747336
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003670 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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