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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003981 ID=TCONS_00003981|Name=TCONS_00003981|organism=Clytia hemisphaerica|type=transcript|length=1318bp
tatcttttcaacgagcacaaaatcgcaacttgattcaaattctatcaaaa
tttacagccatttttgtctcagctgcaaattattttgagacagactttaa
gtttctaaaattcaaaaacacgATACACATCCCCTATATCGAAACATATC
AAAGGGGATGTGTGTAGTCTATAGTCTTAACTATAAAGGGAAACTTCTTG
TACTGTTAAATGTCCTTAAAAATAAACTTCAGTGGAGTACCACTTGAAAA
TCAATCACTCAATTCTAAAATTAACCTTCACAATTTCTGACGTATTTTCg
tttaagtatttttgaaaataccctAAATAAATAAGTGAAATTTTAGACCC
TTGAAGAAAAATACCATTTGGCACCAATGTGGAATTTATATTGCTTAACA
CCAGCTTGCACTGACGTTAGGGTGGGAACTTCACTACAGTAAGATGATTC
TGGGATACAGAAAAATGTATACATCAGAAAGCattctacatgtttttttc
ttttataagcataacgttcaTGAGCATATGTAGGCTCAGTTTTTgctacc
taaacaatggctctattgtttgagaataATAGAATGCTTTGCATAATACG
AGGGATAGActcttgcttataaaaaaaacaacatgtattCCGGATGACCT
AGTTATCCGCTCCCCAAAATCTGATGCAAAATTTTTGAGTCTGGACAGta
agaaaataataatatttgCAATACAGTATATCTGATGAGCCGACTTTGCT
AAAGTTTTATCTTAACATAACAAAAAACAACTTTGCAGGTTTGGAcatga
aaatcaaacaaaatgcacACTGCTTTGAAGTGACAGAAAATCACAAAAGG
GTCAAGTGGCACGCGCTTGCTCTCATTGCAAAGCCTGACAGTCATAGACT
TTCTTAAAACATAGACTTTAGACTTGATGTTCAAAGTCAAGATTTCATCA
CCGTGAGAAAGTAACGAGCACCATGGATATTGGGCCTACCTAATGATAAA
TATagaatggaaaaagaaaaggaagtaaaataagaaacggcatatttccg
gcattttcgataaaaaaatccgaaaaatcgaatgagccaatcctgagaaa
agcttgCATCAGACGAACGGAAGGACCAGGTTAATTTATTGGACCTccgc
ccaccggggtaggtccaaaaaggcaCGGTTAGAAACGACATGTTGTATTT
TACCGAATTTTAGATTCTGTTTAGATAAAGAAGCTTTcaaaaatcacgat
ttcaaGATTTATTTCAGACGATGCTATTGTCCATTAGAGGGCTAGTAGAC
CGCAAGGCTTTGAGCCAT Run BLAST on NCBI transcript from alignment at sc0000038:203354..204671 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003981 ID=TCONS_00003981|Name=TCONS_00003981|organism=Clytia hemisphaerica|type=transcript|length=1318bp|location=Sequence derived from alignment at sc0000038:203354..204671 (Clytia hemisphaerica)
ATGGCTCAAAGCCTTGCGGTCTACTAGCCCTCTAATGGACAATAGCATCG
TCTGAAATAAATCttgaaatcgtgatttttgAAAGCTTCTTTATCTAAAC
AGAATCTAAAATTCGGTAAAATACAACATGTCGTTTCTAACCGtgccttt
ttggacctaccccggtgggcggAGGTCCAATAAATTAACCTGGTCCTTCC
GTTCGTCTGATGcaagcttttctcaggattggctcattcgatttttcgga
tttttttatcgaaaatgccggaaatatgccgtttcttattttacttcctt
ttctttttccattctATATTTATCATTAGGTAGGCCCAATATCCATGGTG
CTCGTTACTTTCTCACGGTGATGAAATCTTGACTTTGAACATCAAGTCTA
AAGTCTATGTTTTAAGAAAGTCTATGACTGTCAGGCTTTGCAATGAGAGC
AAGCGCGTGCCACTTGACCCTTTTGTGATTTTCTGTCACTTCAAAGCAGT
gtgcattttgtttgattttcatgTCCAAACCTGCAAAGTTGTTTTTTGTT
ATGTTAAGATAAAACTTTAGCAAAGTCGGCTCATCAGATATACTGTATTG
caaatattattattttcttaCTGTCCAGACTCAAAAATTTTGCATCAGAT
TTTGGGGAGCGGATAACTAGGTCATCCGGaatacatgttgttttttttat
aagcaagagTCTATCCCTCGTATTATGCAAAGCATTCTATtattctcaaa
caatagagccattgtttaggtagcAAAAACTGAGCCTACATATGCTCAtg
aacgttatgcttataaaagaaaaaaacatgtagaatGCTTTCTGATGTAT
ACATTTTTCTGTATCCCAGAATCATCTTACTGTAGTGAAGTTCCCACCCT
AACGTCAGTGCAAGCTGGTGTTAAGCAATATAAATTCCACATTGGTGCCA
AATGGTATTTTTCTTCAAGGGTCTAAAATTTCACTTATTTATTTagggta
ttttcaaaaatacttaaacGAAAATACGTCAGAAATTGTGAAGGTTAATT
TTAGAATTGAGTGATTGATTTTCAAGTGGTACTCCACTGAAGTTTATTTT
TAAGGACATTTAACAGTACAAGAAGTTTCCCTTTATAGTTAAGACTATAG
ACTACACACATCCCCTTTGATATGTTTCGATATAGGGGATGTGTATcgtg
tttttgaattttagaaacttaaagtctgtctcaaaataatttgcagctga
gacaaaaatggctgtaaattttgatagaatttgaatcaagttgcgatttt
gtgctcgttgaaaagata
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003981-exon-sc0000038-1491911889:203354..204671 | TCONS_00003981-exon-sc0000038-1491911889:203354..204671 | Clytia hemisphaerica | exon |
| TCONS_00003981-exon-sc0000038-1510915933:203354..204671 | TCONS_00003981-exon-sc0000038-1510915933:203354..204671 | Clytia hemisphaerica | exon |
| TCONS_00003981-exon-sc0000038-1575043694:203354..204671 | TCONS_00003981-exon-sc0000038-1575043694:203354..204671 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000038 | supercontig | sc0000038:203354..204671 . |
Blast
The following BLAST results are available for this feature:
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