TCONS_00004892 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004892
Unique NameTCONS_00004892
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2667

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004892 ID=TCONS_00004892|Name=TCONS_00004892|organism=Clytia hemisphaerica|type=transcript|length=2667bp
TGACACTgttaaagaaacattttttcttcTCTTGACGACGAGGAAGTAGA
AACATTGATTGGTGGAATTGTCATTACTCATCCAATCAACCAATTACCGG
AAATATTACGCCTTTATTATTACAAAGGCTAATTAAGAATTTTTGATATC
ACATCTCGTAAAAACGATTGGATAGGATATAAGATTCGTCCTGTCTTCAC
TCATTTTCATTCTTCTTCCAACATCCTTGGTGTGATAAGGAAGGCAAcga
ataaaagagaaacataaaaATACGTGATTATATTTagaggttttttttta
ttttttcataaagatTGACACTGTTGATATTGGTTGGTTTGTTGTTAGAT
TTATAGAAACGTTAAAGGAATAGCAAGGTGTAACAAGAGAGGATGAAGCT
TCTGGTAACTTTGTGTTTCTTTGCTGTCTTCAGCTACAATGTCGCTTTAC
CAGCGACAACCACCGCTCACAAAGCAAAATCGACTATTCCTGTAATTACG
ACGACGGTTGCTGCTCCTACTGAACCTGAAACCACGACTGCTGCCCCTAC
CACTACAGCTGCTGCTCCAACCACCACGGCTGCTGCCCCTAAAACGACAA
CTGCTGCCCCTACCACTACAGCTGCTGCTCCTACCAACACAACTGCTGCC
CCTAAAACGACAACTGCTGCCCCTAAAACGACAACTGCTGCCCCTACCAC
TACGGCTGCTGCCCCTGAAACGACAGCTGCTGCTCCTACCAACACAACTA
CTGCCCCAACCACCACAACTACCGCCCCAACCACGACGACAACGACTCCT
GCACCGACAATCAATCCATTTTGTATTGGTAAAGTCGAGTTCAACGCTGA
TCCAAAGAATTGCAGTCAATTTATTAGATGTCCACGAACCGGTAAACTCA
AAGGTCACGCAGTGGTCTACCACTGTCCCCCTACTCTGGTCTTCAATGTT
GCAGGTGAATACTGTGATTGGCCTCGTAATGTCAAATGTAAGGACGGAAT
TCGCCCAACAAAACGCCCAAGAACTACAACACCTCCTAAAGTTACGAAAC
CAGCAACTACTGCCGCTGCTACAACCGAAGCTCCTACCACTACAGAGGCT
CCTACCACCACTGCTAAAGCACCAACCACTACAACAAAGGCAGCTCCCAC
CACAACAGCAGCCAAAGAGACAACCACAGCAGCAGCCAAAGAGACAACCA
CAGCAGCAGCCAAAGAGACAACCACAGCCGCAGCCAAAGAGACAACCACA
GCCGCAGCCAAAGAGACAACCACAGCCGCAGCCAAAGAGACGACCACAGC
CGAAGCCAAAGAGACGACCACAGCCGCAGCCAAAGAGACGACCACAGCCG
CAGCCAAAGAGACGACCACAGCCGCAGCCAAAGAGACAACCACAGCCGCA
GCCAAAGAGACAACCACAGCAGCAGCCAAAGAGACAACCACAACCGCTCC
AACTACTACAACCACCGCTACAACTACCATCTCTACGACCACCCCTGATC
CATTTTGTATTGGAAAACCTGAACGAAACATTTTCCCTGGAAGTTGCCAC
AAATATATTACTTGTATCGATGGTAAAAAAGGCGTGGTCAATTGCTGGTG
GTACAAGTATGACCCAACCCTCAAGAAATGTGTTAATCCACATAGTGTTT
TGTGTAAAGATGGTGAATTCTTCACGACAACaactacaactacaacaacg
acaacgaccacccctTTCACTGGTTCCACCATCCCCACAACTAGGCCCAA
GACCACCAAAAGTGTTTGCGCAAAGAGCGGTGAATATTACATTCGCGATT
CAAAAGATTGCAGCAAATTTATCCATTGTCAAGGCTCCCGACCAACGTTC
AAAACATGTCCTGGTGTCCTTGTTTTCGATGTAGAGAAGAATGTTTGTAA
TTGGCGTTTCGCAGTCGACTGTGGTGATGCAACAACTGCCGCCCCAGTCA
CAACCACCACAAAAGCCCCTGCAACAACACGAAAACCAGAAACAACAATT
GCTGCCCCTAAAACAACAACCAAAGCTCCCGCAACTACGCAGAAAGCACC
GAAAACCACTACAGTCGCTGCACCTGAAACGACAACCGTTGCTGCACCTG
CAACCACGACAGCTGCTGCACCTGAAACTACTACCAAAGCACCAAAGACT
ACAACTGCTGCACCCAAAACCACTACAGTTGCTGCACCAGAAACCACTAC
CACGGTAGCTGCACCCGAGACAACAGTGAAAATTGCCACAACAAAAGCAA
AACCCACAACAACAGAAGCTCAATCACTTTGCAAAGGCAAGAGCGGCCCT
GTTCCACACCCAAAAGATTGTACAAAATATTTCCAATGTGTCCATGGACG
AAGTTACGATCGATCGTGTCCAACAGGATTACATTTCGATAAAAAGAACG
GATACTGTAATTGGCCAGCTGTAGCAAAATGCTCTACACATTAACCAATT
AAATTGCATATCCTTAAAATatagaccaatcaaaattcTAGATTGGCGCC
Gatattttttaggctttttttcacgttttatctttttaacaattttaaat
gacttaaattttatattttttacatttttttataaaatttattaaatttt
tactttgaCAATATTATTTTTGAAAGCCTGTTTAGGTAAAAAAGAgagaa
ttattttaaattaCATT
Run BLAST on NCBI

protein sequence of TCONS_00004892-protein

>TCONS_00004892-protein ID=TCONS_00004892-protein|Name=TCONS_00004892-protein|organism=Clytia hemisphaerica|type=polypeptide|length=683bp
MKLLVTLCFFAVFSYNVALPATTTAHKAKSTIPVITTTVAAPTEPETTTA
APTTTAAAPTTTAAAPKTTTAAPTTTAAAPTNTTAAPKTTTAAPKTTTAA
PTTTAAAPETTAAAPTNTTTAPTTTTTAPTTTTTTPAPTINPFCIGKVEF
NADPKNCSQFIRCPRTGKLKGHAVVYHCPPTLVFNVAGEYCDWPRNVKCK
DGIRPTKRPRTTTPPKVTKPATTAAATTEAPTTTEAPTTTAKAPTTTTKA
APTTTAAKETTTAAAKETTTAAAKETTTAAAKETTTAAAKETTTAAAKET
TTAEAKETTTAAAKETTTAAAKETTTAAAKETTTAAAKETTTAAAKETTT
TAPTTTTTATTTISTTTPDPFCIGKPERNIFPGSCHKYITCIDGKKGVVN
CWWYKYDPTLKKCVNPHSVLCKDGEFFTTTTTTTTTTTTTPFTGSTIPTT
RPKTTKSVCAKSGEYYIRDSKDCSKFIHCQGSRPTFKTCPGVLVFDVEKN
VCNWRFAVDCGDATTAAPVTTTTKAPATTRKPETTIAAPKTTTKAPATTQ
KAPKTTTVAAPETTTVAAPATTTAAAPETTTKAPKTTTAAPKTTTVAAPE
TTTTVAAPETTVKIATTKAKPTTTEAQSLCKGKSGPVPHPKDCTKYFQCV
HGRSYDRSCPTGLHFDKKNGYCNWPAVAKCSTH
Run BLAST on NCBI

transcript from alignment at sc0000049:113232..118094-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004892 ID=TCONS_00004892|Name=TCONS_00004892|organism=Clytia hemisphaerica|type=transcript|length=4863bp|location=Sequence derived from alignment at sc0000049:113232..118094- (Clytia hemisphaerica)
TGACACTGTTAAAGAAACATTTTTTCTTCTCTTGACGACGAGGAAGTAGA
AACATTGATTGGTGGAATTGTCATTACTCATCCAATCAACCAATTACCGG
AAATATTACGCCTTTATTATTACAAAGGCTAATTAAGAATTTTTGATATC
ACATCTCGTAAAAACGATTGGATAGGATATAAGATTCGTCCTGTCTTCAC
TCATTTTCATTCTTCTTCCAACATCCTTGGTGTGATAAGGAAGGCAACGA
ATAAAAGAGAAACATAAAAATACGTGATTATATTTAGAGGTTTTTTTTTA
TTTTTTCATAAAGATTGACACTGTTGATATTGGTTGGTTTGTTGTTAGAT
TTATAGAAACGTTAAAGGAATAGCAAGGTGTAACAAGAGAGGATGAAGCT
TCTGGTAACTTTGTGTTTCTTTGCTGTCTTCAGCTACAATGTCGCTTTAC
CAGCGACAACCACCGCTCACAAAGCAAAATCGACTATTCCTGTAATTACG
ACGACGGTTGCTGCTCCTACTGAACCTGAAACCACGACTGCTGCCCCTAC
CACTACAGCTGCTGCTCCAACCACCACGGCTGCTGCCCCTAAAACGACAA
CTGCTGCCCCTACCACTACAGCTGCTGCTCCTACCAACACAACTGCTGCC
CCTAAAACGACAACTGCTGCCCCTAAAACGACAACTGCTGCCCCTACCAC
TACGGCTGCTGCCCCTGAAACGACAGCTGCTGCTCCTACCAACACAACTA
CTGCCCCAACCACCACAACTACCGCCCCAACCACGACGACAACGACTCCT
GCACCGACAATCAATCGTAAGTCCTATTGTTTATTTTATCTGCTAAATAG
AAATGTCCGCCTTTTAGAAACTTTTCAATTCTGTGCTCTTATCTTAGGTA
CTATTAAGGGTTTCAAGTATGTAAAATTTTGGTCCGAATTGCTTTTCTAG
AGACACTAGGACATGGAAGAACAAGAGAATGATTATTTAAATGCAACAAT
TTAGTTTTTATGAATCATAGTAGTCTTGAGGTCCATGTCATTTTCTTGAT
GTAAATAAATTCACGAATGGATAAAGGAAGCGCTCCAAACGTCTATAAGC
GATTTGTTCAATTAAACTTTCAAGAGTTTAAGAAATAGATAGTTTGGATA
AATCAATCCTATCTATTTCTTTTTAAGTCTATGATCAGTTTGACCGTTGA
TGTCCGCTGATTAGAGAGGAAAAAAGTAGCGTTTTGGCCATTTCGTGCAA
AAAAACGGTCCGCTAATGTCCACCTTTTAGAAACTTTTTTATGAGGATTT
GACTAGGAAATGGCCGGGGAAAATAGAATTGTCCACCACTAGTCAAAGGT
GTCCGCCAACTTACGCTTATAGCATTTTTAAGCTTCCCTATTTTCTCATC
GATATCCTAAGTTCCCTTTCTTAATTCCTTGGTAAATTCGGCTGATGGTT
GCTATTTAGTTGCCATTAATTTCATTTGTTGGATTCATCTAGGTCGATTC
TTGATGATTTACATGAGATGAATAATTTTGGTTGGTTTTCTTGTATATTG
ACTTATGGACGACTTATCTAGATACTTATTAAGAGAAGAATTCATTTTCA
TAAAATTTTATCTTTTAACCTTCTTATATTTCTACTACCAATTTATTGCA
GCATTTTGTATTGGTAAAGTCGAGTTCAACGCTGATCCAAAGAATTGCAG
TCAATTTATTAGATGTCCACGAACCGGTAAACTCAAAGGTCACGCAGTGG
TCTACCACTGTCCCCCTACTCTGGTCTTCAATGTTGCAGGTGAATACTGT
GATTGGCCTCGTAATGTCAAATGTAAGGACGGAATTCGCCCAACAAAACG
CCCAAGAACTACAACACCTCCTAAAGTTACGAAACCAGCAACTACTGCCG
CTGCTACAACCGAAGCTCCTACCACTACAGAGGCTCCTACCACCACTGCT
AAAGCACCAACCACTACAACAAAGGCAGCTCCCACCACAACAGCAGCCAA
AGAGACAACCACAGCAGCAGCCAAAGAGACAACCACAGCAGCAGCCAAAG
AGACAACCACAGCCGCAGCCAAAGAGACAACCACAGCCGCAGCCAAAGAG
ACAACCACAGCCGCAGCCAAAGAGACGACCACAGCCGAAGCCAAAGAGAC
GACCACAGCCGCAGCCAAAGAGACGACCACAGCCGCAGCCAAAGAGACGA
CCACAGCCGCAGCCAAAGAGACAACCACAGCCGCAGCCAAAGAGACAACC
ACAGCAGCAGCCAAAGAGACAACCACAACCGCTCCAACTACTACAACCAC
CGCTACAACTACCATCTCTACGACCACCCCTGATCGTGAGTGAAAATTTA
TTTTTCAAATGGCCCTCTCATCTATTAAGTCCGATCGGTTATATAGTGCT
ATGAAAATGCATATCAAAGTCGAACGAACTTCAGCCGTGAAGTTGACTCT
TTGACGCATCGAAAGTTATTAAGTTATCATTGCTTTGAAATTTCTTCCCA
TTTATATTATAGCATTTTGTATTGGAAAACCTGAACGAAACATTTTCCCT
GGAAGTTGCCACAAATATATTACTTGTATCGATGGTAAAAAAGGCGTGGT
CAATTGCTGGTGGTACAAGTATGACCCAACCCTCAAGAAATGTGTTAATC
CACATAGTGTTTTGTGTAAAGATGGTGAATTCTGTAAGTTGTAAAAATAA
TTAAAATCTCTAACCAACAAATTAATTGCAAAAGAGTCTAGACAAGTAAG
AAATTGACGTTACCATATTCTACTTCCATAACTACAGAACTACAAAACAG
GTCTTTGATCTTGGGCTTGTGGGGAATCAAATAGGAATATAATGTCCAGT
TATAAGAAAGTAGCATAATAAATTAAACTTCTGAAGGATACAGTATGAGA
AAACCTCAAATCTTTTTCTGAGGGATGGTTAGTTGACTTTTAAATATAAT
TTATTACTAAAACTTTTGAAAAATATAAATCCTTGATTCCCTTCATGGTT
ATTAACCTAATTAACCCAAAGCCAATTAGTTGCATTCTTTACGTTCATTC
TTCTTTACTTTGTAGTCACGACAACAACTACAACTACAACAACGACAACG
ACCACCCCTTTCACTGGTTCCACCATCCCCACAACTAGGCCCAAGACCAC
CAAAAGTATGTTTCTCCTTTTCAATTCTTTTTGGTTAATTCTATCCATTG
GATTTACAGCCCATCGTTATTAAGGCTGAATTTTTTGCTTAGTGTTGTCT
TTTTTTGTTATTTGTCTTAAAGTTTTTTTTCACCCCCTCACTTTTCACTT
GAATAGAATGATGTGATCGATGAGAAATTTTGAGAAACCCACCAAAATGA
CATTCGGAAATATCGGTACCTTTGAGCGATACCTATTATAATATATATAT
TTCCCTGTTTTAGGTGTTTGCGCAAAGAGCGGTGAATATTACATTCGCGA
TTCAAAAGATTGCAGCAAATTTATCCATTGTCAAGGCTCCCGACCAACGT
TCAAAACATGTCCTGGTGTCCTTGTTTTCGATGTAGAGAAGAATGTTTGT
AATTGGCGTTTCGCAGTCGACTGTGGTGATGGTAAGATATTACAGAAAAT
ACACCACTGTATCTTTTGTTACATCCACCACCATTATCTGACTGTTCAAT
ATTAATAGATTATTGCAACCACACCTTCTGTTAGGAACAGTATCTATGAC
AGGAGACTGAGATGACCATAATTTAGGCCATTTAGGCAGAATTGAAAAGT
GAGAAATTAAAATTACAAAGACAATACTAATTTTAAATCCCTTAAATCCT
TTTCATAGATAAACTATAAAGAATATATATTGAACATTTAAGCCAAGAAA
TCACTAGAGAGTAAGGACAACCGTAGGTCAAGCCAAATTTTAATTGCTTT
CATTCATCGTGTAGCAACAACTGCCGCCCCAGTCACAACCACCACAAAAG
CCCCTGCAACAACACGAAAACCAGAAACAACAATTGCTGCCCCTAAAACA
ACAACCAAAGCTCCCGCAACTACGCAGAAAGCACCGAAAACCACTACAGT
CGCTGCACCTGAAACGACAACCGTTGCTGCACCTGCAACCACGACAGCTG
CTGCACCTGAAACTACTACCAAAGCACCAAAGACTACAACTGCTGCACCC
AAAACCACTACAGTTGCTGCACCAGAAACCACTACCACGGTAGCTGCACC
CGAGACAACAGTGAAAATTGCCACAACAAAAGCAAAACCCACAACAACAG
AAGCTCAATGTAAGTGGAAGGGACTTTAACATCATATTTTTTTCTTGTTC
GATTTATTCATTCCTTCATGTGATTTTTGAAACTTTAAACGATTTTTAGT
AGGGTAGGGAATTCCATTAAAAACAGTCGCTAGAAATATTGATAATAATG
TTCTTCATGTTCTTCTTCGTTATTAACTTATACAGGTTTTTTATAAATTG
TTTATCATTACTTTTTTTAGCACTTTGCAAAGGCAAGAGCGGCCCTGTTC
CACACCCAAAAGATTGTACAAAATATTTCCAATGTGTCCATGGACGAAGT
TACGATCGATCGTGTCCAACAGGATTACATTTCGATAAAAAGAACGGATA
CTGTAATTGGCCAGCTGTAGCAAAATGCTCTACACATTAACCAATTAAAT
TGCATATCCTTAAAATATAGACCAATCAAAATTCTAGATTGGCGCCGATA
TTTTTTAGGCTTTTTTTCACGTTTTATCTTTTTAACAATTTTAAATGACT
TAAATTTTATATTTTTTACATTTTTTTATAAAATTTATTAAATTTTTACT
TTGACAATATTATTTTTGAAAGCCTGTTTAGGTAAAAAAGAGAGAATTAT
TTTAAATTACATT

Coding sequence (CDS) from alignment at sc0000049:113232..118094-

>TCONS_00004892 ID=TCONS_00004892|Name=TCONS_00004892|organism=Clytia hemisphaerica|type=CDS|length=2052bp|location=Sequence derived from alignment at sc0000049:113232..118094- (Clytia hemisphaerica)
ATGAAGCTTCTGGTAACTTTGTGTTTCTTTGCTGTCTTCAGCTACAATGT
CGCTTTACCAGCGACAACCACCGCTCACAAAGCAAAATCGACTATTCCTG
TAATTACGACGACGGTTGCTGCTCCTACTGAACCTGAAACCACGACTGCT
GCCCCTACCACTACAGCTGCTGCTCCAACCACCACGGCTGCTGCCCCTAA
AACGACAACTGCTGCCCCTACCACTACAGCTGCTGCTCCTACCAACACAA
CTGCTGCCCCTAAAACGACAACTGCTGCCCCTAAAACGACAACTGCTGCC
CCTACCACTACGGCTGCTGCCCCTGAAACGACAGCTGCTGCTCCTACCAA
CACAACTACTGCCCCAACCACCACAACTACCGCCCCAACCACGACGACAA
CGACTCCTGCACCGACAATCAATCCATTTTGTATTGGTAAAGTCGAGTTC
AACGCTGATCCAAAGAATTGCAGTCAATTTATTAGATGTCCACGAACCGG
TAAACTCAAAGGTCACGCAGTGGTCTACCACTGTCCCCCTACTCTGGTCT
TCAATGTTGCAGGTGAATACTGTGATTGGCCTCGTAATGTCAAATGTAAG
GACGGAATTCGCCCAACAAAACGCCCAAGAACTACAACACCTCCTAAAGT
TACGAAACCAGCAACTACTGCCGCTGCTACAACCGAAGCTCCTACCACTA
CAGAGGCTCCTACCACCACTGCTAAAGCACCAACCACTACAACAAAGGCA
GCTCCCACCACAACAGCAGCCAAAGAGACAACCACAGCAGCAGCCAAAGA
GACAACCACAGCAGCAGCCAAAGAGACAACCACAGCCGCAGCCAAAGAGA
CAACCACAGCCGCAGCCAAAGAGACAACCACAGCCGCAGCCAAAGAGACG
ACCACAGCCGAAGCCAAAGAGACGACCACAGCCGCAGCCAAAGAGACGAC
CACAGCCGCAGCCAAAGAGACGACCACAGCCGCAGCCAAAGAGACAACCA
CAGCCGCAGCCAAAGAGACAACCACAGCAGCAGCCAAAGAGACAACCACA
ACCGCTCCAACTACTACAACCACCGCTACAACTACCATCTCTACGACCAC
CCCTGATCCATTTTGTATTGGAAAACCTGAACGAAACATTTTCCCTGGAA
GTTGCCACAAATATATTACTTGTATCGATGGTAAAAAAGGCGTGGTCAAT
TGCTGGTGGTACAAGTATGACCCAACCCTCAAGAAATGTGTTAATCCACA
TAGTGTTTTGTGTAAAGATGGTGAATTCTTCACGACAACAACTACAACTA
CAACAACGACAACGACCACCCCTTTCACTGGTTCCACCATCCCCACAACT
AGGCCCAAGACCACCAAAAGTGTTTGCGCAAAGAGCGGTGAATATTACAT
TCGCGATTCAAAAGATTGCAGCAAATTTATCCATTGTCAAGGCTCCCGAC
CAACGTTCAAAACATGTCCTGGTGTCCTTGTTTTCGATGTAGAGAAGAAT
GTTTGTAATTGGCGTTTCGCAGTCGACTGTGGTGATGCAACAACTGCCGC
CCCAGTCACAACCACCACAAAAGCCCCTGCAACAACACGAAAACCAGAAA
CAACAATTGCTGCCCCTAAAACAACAACCAAAGCTCCCGCAACTACGCAG
AAAGCACCGAAAACCACTACAGTCGCTGCACCTGAAACGACAACCGTTGC
TGCACCTGCAACCACGACAGCTGCTGCACCTGAAACTACTACCAAAGCAC
CAAAGACTACAACTGCTGCACCCAAAACCACTACAGTTGCTGCACCAGAA
ACCACTACCACGGTAGCTGCACCCGAGACAACAGTGAAAATTGCCACAAC
AAAAGCAAAACCCACAACAACAGAAGCTCAATCACTTTGCAAAGGCAAGA
GCGGCCCTGTTCCACACCCAAAAGATTGTACAAAATATTTCCAATGTGTC
CATGGACGAAGTTACGATCGATCGTGTCCAACAGGATTACATTTCGATAA
AAAGAACGGATACTGTAATTGGCCAGCTGTAGCAAAATGCTCTACACATT
AA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002769XLOC_002769Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004892-proteinTCONS_00004892-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004892-exon-sc0000049-1575043694:117279..118094TCONS_00004892-exon-sc0000049-1575043694:117279..118094Clytia hemisphaericaexon
TCONS_00004892-exon-sc0000049-1575043694:115760..116443TCONS_00004892-exon-sc0000049-1575043694:115760..116443Clytia hemisphaericaexon
TCONS_00004892-exon-sc0000049-1575043694:115412..115582TCONS_00004892-exon-sc0000049-1575043694:115412..115582Clytia hemisphaericaexon
TCONS_00004892-exon-sc0000049-1575043694:114940..115029TCONS_00004892-exon-sc0000049-1575043694:114940..115029Clytia hemisphaericaexon
TCONS_00004892-exon-sc0000049-1575043694:114514..114681TCONS_00004892-exon-sc0000049-1575043694:114514..114681Clytia hemisphaericaexon
TCONS_00004892-exon-sc0000049-1575043694:113836..114180TCONS_00004892-exon-sc0000049-1575043694:113836..114180Clytia hemisphaericaexon
TCONS_00004892-exon-sc0000049-1575043694:113232..113624TCONS_00004892-exon-sc0000049-1575043694:113232..113624Clytia hemisphaericaexon
TCONS_00004892-exon-sc0000049-1510915933:117279..118094TCONS_00004892-exon-sc0000049-1510915933:117279..118094Clytia hemisphaericaexon
TCONS_00004892-exon-sc0000049-1510915933:115760..116443TCONS_00004892-exon-sc0000049-1510915933:115760..116443Clytia hemisphaericaexon
TCONS_00004892-exon-sc0000049-1510915933:115412..115582TCONS_00004892-exon-sc0000049-1510915933:115412..115582Clytia hemisphaericaexon
TCONS_00004892-exon-sc0000049-1510915933:114940..115029TCONS_00004892-exon-sc0000049-1510915933:114940..115029Clytia hemisphaericaexon
TCONS_00004892-exon-sc0000049-1510915933:114514..114681TCONS_00004892-exon-sc0000049-1510915933:114514..114681Clytia hemisphaericaexon
TCONS_00004892-exon-sc0000049-1510915933:113836..114180TCONS_00004892-exon-sc0000049-1510915933:113836..114180Clytia hemisphaericaexon
TCONS_00004892-exon-sc0000049-1510915933:113232..113624TCONS_00004892-exon-sc0000049-1510915933:113232..113624Clytia hemisphaericaexon
TCONS_00004892-exon-sc0000049-1491911889:117279..118094TCONS_00004892-exon-sc0000049-1491911889:117279..118094Clytia hemisphaericaexon
TCONS_00004892-exon-sc0000049-1491911889:115760..116443TCONS_00004892-exon-sc0000049-1491911889:115760..116443Clytia hemisphaericaexon
TCONS_00004892-exon-sc0000049-1491911889:115412..115582TCONS_00004892-exon-sc0000049-1491911889:115412..115582Clytia hemisphaericaexon
TCONS_00004892-exon-sc0000049-1491911889:114940..115029TCONS_00004892-exon-sc0000049-1491911889:114940..115029Clytia hemisphaericaexon
TCONS_00004892-exon-sc0000049-1491911889:114514..114681TCONS_00004892-exon-sc0000049-1491911889:114514..114681Clytia hemisphaericaexon
TCONS_00004892-exon-sc0000049-1491911889:113836..114180TCONS_00004892-exon-sc0000049-1491911889:113836..114180Clytia hemisphaericaexon
TCONS_00004892-exon-sc0000049-1491911889:113232..113624TCONS_00004892-exon-sc0000049-1491911889:113232..113624Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000049supercontigsc0000049:113232..118094 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.74269	0.647451	0.310506	0.0316423	1.49877	0.999763	1.07629	1.59827	0.433281	0.994337	1.02362	0.456579	7.42755	3.80775	83.4382	73.35	1.6726	1.8902	0.425113	0.44485	0.809402	0.565791	1.50598	1.22083	0.774835	0.834845	0.430851	0.46468	1.2999	1.40369
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002557Chitin-bd_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006030 chitin metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0008061 chitin binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004892 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top