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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005000 ID=TCONS_00005000|Name=TCONS_00005000|organism=Clytia hemisphaerica|type=transcript|length=677bp
AGTTTTAAATGATTCTTATTCTTCAGGAAAATTAACAAACAAAATTCTAT
ACACGAGTAAGAAACTAAATATTCACTTTTTATAAACATTAATATTAACA
ACAACACTATTGGCTTCACCGGAGACATATTGTCCTTCTTTGTCACCAGG
TCCACAATTCATGGTAATTTGGCGAAACTTTTGTCCAATGGGTGCCTTGT
TTGGGGTGGTTGGGCGCGTCTTAGGGGCGGTTGTTTCTTTTGTAATTGTG
ATGTCAGTTGATGTCGTTGGTCGAGATGTGGTTGGTCGAGAAGTCGTTGT
TTGAGAAGTCGTCGGTCGAGATGTTGTTGGCTGAGATGTTGTTGGCTGAG
ATGTCGTTGGTTGAGAGGTTGTTGGCTGAGATGTCGTCGCTCGAGATGTC
TTTGGTCGAGAAGTCGTTACTGTATCGGTCGATGTAGAAGAGGCAACATT
GGTTGATAATGTCGGACGTGTCGATGTGATTTTAGTTAATCGATTATCTG
TGTTTGATGATGTTCCATCCTTTTTAATGACAAAGAATTCGAGTGGATCA
TCTGGGCCACGTACTGCAACTCCAGGGTCGGCCAAATTGGCAAATCCGTC
ATTCGAATGGTCTTGTGCTGTCAACGTTCTGGAGTAATCTTGAAGTACAT
CATTCAACACCTTTACTGTAAAAGGAA Run BLAST on NCBI transcript from alignment at sc0000050:461632..462458+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005000 ID=TCONS_00005000|Name=TCONS_00005000|organism=Clytia hemisphaerica|type=transcript|length=827bp|location=Sequence derived from alignment at sc0000050:461632..462458+ (Clytia hemisphaerica)
AGTTTTAAATGATTCTTATTCTTCAGGAAAATTAACAAACAAAATTCTAT
ACACGAGTAAGAAACTAAATATTCACTTTTTATAAACATTAATATTAACA
ACAACACTATTGGCTTCACCGGAGACATATTGTCCTTCTTTGTCACCAGG
TCCACAATTCATGGTAATTTGGCGAAACTTTTGTCCAATGGGTGCCTTGT
TTGGGGTGGTTGGGCGCGTCTTAGGGGCGGTTGTTTCTTTTGTAATTGTG
ATGTCAGTTGATGTCGTTGGTCGAGATGTGGTTGGTCGAGAAGTCGTTGT
TTGAGAAGTCGTCGGTCGAGATGTTGTTGGCTGAGATGTTGTTGGCTGAG
ATGTCGTTGGTTGAGAGGTTGTTGGCTGAGATGTCGTCGGTTGAGATGTC
GTTGGTCGAGAGGTCGTTGGTCGAGAGGTCGTTGGTCGAGAGGTCGTTGG
TCGAGAGGTCGTTGGTCGAGATGTCGTTGGTCGAGATGTCGTTGGTCGAG
ATGTTGTCGATCGAGATATCGTAGATTGAGATATCGTAGCTCGAGATGTC
TTTGGTCGAGAAGTCGTTACTGTATCGGTCGATGTAGAAGAGGCAACATT
GGTTGATAATGTCGGACGTGTCGATGTGATTTTAGTTAATCGATTATCTG
TGTTTGATGATGTTCCATCCTTTTTAATGACAAAGAATTCGAGTGGATCA
TCTGGGCCACGTACTGCAACTCCAGGGTCGGCCAAATTGGCAAATCCGTC
ATTCGAATGGTCTTGTGCTGTCAACGTTCTGGAGTAATCTTGAAGTACAT
CATTCAACACCTTTACTGTAAAAGGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005000-exon-sc0000050-1491911889:461632..462020 | TCONS_00005000-exon-sc0000050-1491911889:461632..462020 | Clytia hemisphaerica | exon |
| TCONS_00005000-exon-sc0000050-1510915933:461632..462020 | TCONS_00005000-exon-sc0000050-1510915933:461632..462020 | Clytia hemisphaerica | exon |
| TCONS_00005000-exon-sc0000050-1575043694:461632..462020 | TCONS_00005000-exon-sc0000050-1575043694:461632..462020 | Clytia hemisphaerica | exon |
| TCONS_00005000-exon-sc0000050-1491911889:462171..462458 | TCONS_00005000-exon-sc0000050-1491911889:462171..462458 | Clytia hemisphaerica | exon |
| TCONS_00005000-exon-sc0000050-1510915933:462171..462458 | TCONS_00005000-exon-sc0000050-1510915933:462171..462458 | Clytia hemisphaerica | exon |
| TCONS_00005000-exon-sc0000050-1575043694:462171..462458 | TCONS_00005000-exon-sc0000050-1575043694:462171..462458 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000050 | supercontig | sc0000050:461632..462458 + |
Blast
The following BLAST results are available for this feature:
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