TCONS_00005331 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005331
Unique NameTCONS_00005331
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3744

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005331 ID=TCONS_00005331|Name=TCONS_00005331|organism=Clytia hemisphaerica|type=transcript|length=3744bp
GGGAAATATAAAAAGACATGGGATGGTGTTTTTCTATTACTTTGTTATTT
TGATCATCTCTGATAGCTTAATGAACATTTGGTGATAAGAAACAGTGAAG
AATATACTATAATAAGAAAAGATGACGAGTTGGACATTGTCGGCGCTGCT
GGTCTCAGTGCTTGTTGTTGCATCATACGCAGATGTCTACATGCAAAATA
TGAGAGGAAGCAACAATCGTTTGAATGGAAAAGGTCGAGACCGTCAAAAC
GCAAACAGACTGTTCGATTCACAAAATAACGCTCGTGGTGGCTACAACGC
TGGAGGTCTTATCTATTATGAGGGTTCAAAAGTTGTTTTAGAATGGACCA
ATCAGCATCAATGCGGTGGAGACAATAATAATTGTGAATTGGTCGTCCAA
TACATGTGCAGTGACAAATTGAGAAATGGAATCACTGAAAAgacCATTCC
ACAAAAATTGACCGATTGTGAGAAGGATGACTGCGATACTGACCTTGAAT
ATGGAATGCATGAAGACCATGCTTATTACGAGCACTGCTACACACGAAAA
CGTAACCATGGACTCTACACAGCCGATCAGGACATGAACAACCGAGCTAC
AGCCCGTCATACACGACAAGATAATGGTGGTACCAGATACGGTTATGAAT
GCCCCGAAGAAAGAGATTATTATCCTTATTTTGGCCCAACTCCATGGAAG
GATATCGTTGTGATGACTGGCAACACGGCTCGATGTCCTTATTACAAAGC
TGAAAGTCAAAATGTTAAAGCAAGATCTCACTGTGTCTCCAACGTTCATG
ACCTTCCAAAGGAAGTAAGATCAGACACCAACAATCTGAATaaccatttc
aaaaaatatccaGTTCCTCAAACTGAAGAAGAATGCCAGgATTACGCTAG
TACTCTTAAGAAGGATGGTCAAACCTATGAAATCACTGGCGAATGGAAAA
CAGAAGCCGCATATGGTATCCCTGCTCCAGATTGTATCCAATCTCCTTAC
TCACGTGACAATCACCTTGGTAACGGTAAAGGTGGACAACCAAACAGATA
TGAATGGACCATTCCCAATGAAATCCATGATCAATGTACTCTCCGTATCA
GATACAACATTTCCACTGGAGAATTCCCATGGGAAACTGATTTCAAATCA
AATGGCCGTAACCGTGGCAACCAACCATGCAAAGCATGTGCAGTAAATCT
TGGAGATCAACTCGGTATTGACGAATGGGATGCGCAAGATCGTGGCTACA
TTTTGACTGGAAACCCCGATATTTTACCTTTGACTGATGAGAAAGGTGAT
GttgaagaaaaattcgaattgaAATTGGCTGTCAACACTGACCAGTATGG
TAGAACCTTCGAAGACAGATCCCATATGTTTGCCATTCGTGAACGACCAG
CCGGTGTCCCTGCAAACGCTGTCATCCACAATCTGGAAGTGAAGGGAAAA
CGAGGAAACATTGTGCAAACCTTCCCAGCTACCGAGTATGATTTCCACCA
TTTTTCAACTTGCCAAGAAGTCAAACAAGGAGATTACATTCATGTCCATT
GGACCGGTTCAGACGACAATCCTAATAACAACGCTGGTCAAGGAGAGGCT
GGTACTGACAGATCAAACATTGTTCTTCTTGAAGACAAAGTCTATTCATA
CCCATCCACTAATTTCGGAAGAAGTTATCCAAAGAACATTTCCAAAGCAA
GCTTCTTGGGATTCAGTTATGAAGATGCACAGCTTTTAGCTATGGCCGGA
CCACACACTGGTGGAGATATTGAAGAGTTGGATGAGAATGGTCCAAGCTT
TGATCTCGGAATAAGAAAAATGGATAAACCAGGAATTTACAGaTTCTTGT
GTACTCGTAACAACAACTTCACTAACCGTGGACAAAAGGGTTGCATCAAG
GTCGTTGCCAGTGCTGCTGGTGATGCTCCAGAAAAATTCCCTGAAGAGAG
CAATGACGTTAATGATGCGTTAAAAACAGTCGAAGCGGAAATGATGAAAG
ATTTGAACATGTCTTAAGTGTCCGAGATTTAATTTGATGTCCGGCAATCG
AATAATATAGATTTTCTCTTGTTATAACAAAATGAATTGGCATAATGATA
TCATAAACTTTAGACGTAGTATGTTTCTTTAGTATGAGTACACTAAGTGT
ATAGAAATATTTCTATTCTAGACGCTTCCAGGGTTTTTAATACCTTTTGG
AATCCCTATAAAATCTAAATACTCTCGTACGAAATCTGTACTGGTTTTCT
TGTGGACTTTTTCTCGATATAATTGACTTATACTATACTATTATTATTTG
ATAATATactattttatgttttatttatttatagtaAACTGggttgtaat
ttttttgataatttctttaATAAAGTTTCATTACTATTCATGACAGATGC
AGATACTTTTGTCTTTATCATttgcacgcttttttttataagagcatcca
aaaatttttgaaaccttcgggtgttcttaactttttgagttttaagcctt
aaaaatgttcttaatatgttcttattttcaccatattttgagcatttttg
ttcatttttcctaagaaattgggtgtttaagagttgcaaagctttaaaat
gttcttaacttgttcttaacattttggccatcgaagccttatgttcttat
atagtttgtttttataaagaacgtGTATCCTTCCtattggaaaatttaaa
attaaggtATTGTTATCAATATCAACAAATCGTGACtatttttgaccaat
ttctTCGAGTATCAGGGACTCTAACATCGGTTGTTGACTTCATTAGCAAA
GGGAACTTCCAGCTTTACAAAGCAATCTTAGCAATATCTTCAAGTTAGAA
GCATATTTTCCGGggtaaaaaatttcgattttgactGGGTTTTAATTATC
CGCTTAAAATTAGGTAATTTCTTTCTCACCGGGTTATCCACCGGGGCGGA
tcccaccgggtcactgatacaaGGGTATCAAAAAAACTGGTAGCCAACAC
CATGATAACTACCGCAATCTTTATCTAAGTTTACCAGACTACATATTCTC
ACAATATTAGTACTTCAATAATTTAGGCCCAACCCAATGATTAACACATC
GCAAATATAACTCAGCTCCGACCCCAAAATTAAAGAACAATGAAAAAGAG
AGTATATAAGGCGAGTCGATGAGATCAAAGTGAGCAGTCGGATGATTtca
tcaatataaaaaaaatggtgaattttcaaggaaaagctACATCAGGCATT
CTTTTGCTTTGTCTGTGTACAACTTTGGTAAACTCCCTTCGTCCAGCGAT
TTCCATCGACGTGATCAATTCTGCGTGTAAAACAAAGGCATCTTCAGAGT
GCATCAATGTTGTAGAATCTATCGCAGTCTACACAGAATGCTGGAAAAGA
GAATTCAGAAATTGCAATCGTGGTTTTAGTGCTCTCAATCGGCTTTCTGG
TCATTGTGTCAAGGTCAAGAAAGAATCAATCATTTGTTATCTTGACGAAG
ATGAAGTTGAACAATGTTTTAATGCAGTATATACAATTGAACAATGTAGC
AATTGATCATTCAGAGGCCCTCGTCTTTATCCCATCACTTGACACAATca
agaaaaaagctaaaattggTTACCAATTTCAATCACCCGACAAGCCTTAA
ATATTTCCCGAAACCCTGGCTTAGCGATGTCAAACACGTTTTCTTagctt
tattttttaatttaatcatAATATAAACTCATGTACACTATTGA
Run BLAST on NCBI

protein sequence of TCONS_00005331-protein

>TCONS_00005331-protein ID=TCONS_00005331-protein|Name=TCONS_00005331-protein|organism=Clytia hemisphaerica|type=polypeptide|length=631bp
MTSWTLSALLVSVLVVASYADVYMQNMRGSNNRLNGKGRDRQNANRLFDS
QNNARGGYNAGGLIYYEGSKVVLEWTNQHQCGGDNNNCELVVQYMCSDKL
RNGITEKTIPQKLTDCEKDDCDTDLEYGMHEDHAYYEHCYTRKRNHGLYT
ADQDMNNRATARHTRQDNGGTRYGYECPEERDYYPYFGPTPWKDIVVMTG
NTARCPYYKAESQNVKARSHCVSNVHDLPKEVRSDTNNLNNHFKKYPVPQ
TEEECQDYASTLKKDGQTYEITGEWKTEAAYGIPAPDCIQSPYSRDNHLG
NGKGGQPNRYEWTIPNEIHDQCTLRIRYNISTGEFPWETDFKSNGRNRGN
QPCKACAVNLGDQLGIDEWDAQDRGYILTGNPDILPLTDEKGDVEEKFEL
KLAVNTDQYGRTFEDRSHMFAIRERPAGVPANAVIHNLEVKGKRGNIVQT
FPATEYDFHHFSTCQEVKQGDYIHVHWTGSDDNPNNNAGQGEAGTDRSNI
VLLEDKVYSYPSTNFGRSYPKNISKASFLGFSYEDAQLLAMAGPHTGGDI
EELDENGPSFDLGIRKMDKPGIYRFLCTRNNNFTNRGQKGCIKVVASAAG
DAPEKFPEESNDVNDALKTVEAEMMKDLNMS
Run BLAST on NCBI

transcript from alignment at sc0000052:313030..324640-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005331 ID=TCONS_00005331|Name=TCONS_00005331|organism=Clytia hemisphaerica|type=transcript|length=11611bp|location=Sequence derived from alignment at sc0000052:313030..324640- (Clytia hemisphaerica)
GGGAAATATAAAAAGACATGGGATGGTGTTTTTCTATTACTTTGTTATTT TGATCATCTCTGATAGCTTAATGAACATTTGGTGATAAGAAACAGTGAAG GTAGGACGTGATTTAGAAATCATCAAATCAAGCTTGGTGCTTTTACAAAA TGACAAGTCTTTGATTACCTAGATGTATATGAAGAGAGCTATTTTTTTAA TAGAATGTCACTAGTATTTGAAACGGATAGAATAAATATGTTTTTAACAG GAGTGTAGTGAATTGGGGAGGTAATTATCCAAAGTTGGTATTTTTACGCC TATGAATATTATTTTTAAAACATTAAAAACTTTTAAGGTATTTTTTGAAC TTTTTAACAAAAAAATTGCTAAGTTTAGGTGGAAAAGCAAATAGGTGCTG CAATTAGCAATCAAGCGCGCCTTACAAGAAACAAGACCCTTTATAAGTTC ATTCACATCCCTGTTTCACTGACTCAATGGGATCCCCGCCCCATTGAAAA ATTTGGCAAAAATTTCGTACCCGGTGGGAAAATACACTACAATTTCAGCC AAACTTGGAAATTGACACCGGGGTTGTGAGACAGAAGTGTTAATACTTGC AGTAAAACATTTAGCATGAAAGACATTTATGTTTCATATGTGCTTTGGTA GACTAGCAAACTAGTCTGTTAATTAATCATGTCAGAGGGTGGGAACATAA AGGCGGCGGGCGTTTGCTAGAATAGGAGCTGGGTAGGAGACTATCAAAAG TTGGTAAGAGGCTGTTGATTGACAGGGCTTTCAGCCCTTGCCGCCGACAA AATTTCTTCGCACGCTTACCTAACTACTTTTCCTGCGCAATACCGTTCAA GCCCAACCAGTCTAGTGTTTTGCTTAAAATTGTTTCACTTATTAATCCCA ACCCTTATTATATTAGTCATAGCTTTAAGAATAAACCATTATTATTTAGA ATATACTATAATAAGAAAAGATGACGAGTTGGACATTGTCGGCGCTGCTG GTCTCAGTGCTTGTTGTTGCATCATACGCAGATGTCTACATGCAAAATAT GAGGTAAGATTATTTCATTTATATCTTGGAAAATTTTGAAAAAGACTCTT AGAAACTTTTTGAGCCTTTGGAAACAAACCTGATTAAAGACTTATACTTC GAATCAGTACACCAACATTAAGTTTATCGTACAAATTCGGCAAAATTTCA GTTTATTTTTTGCTATAATTTTTAGCGTATCGCTTTTATAGGACCGTGCA CAGCACAAAGACATTATTTCTACGGTCAATAATTTCCCATATTGGTCGTT TAAAATAATATATGAGGTACCTAGACCCTCGATACAACATAAGGCTATGT ATCTTTACTTTGTTTTCATTTCGTTTCAGAGGAAGCAACAATCGTTTGAA TGGAAAAGGTCGAGACCGTCAAAACGCAAACAGGTATAATACTTTTACAA TTTTGTAAGATTCACTTTAAGTGACGTGACCTCTTTCGTTTTGTTGCCAC TGCACTTGAAGGAAGCACCCTCATTGACACTCCTACTCTTGTCTCCCGAA TAGACGGGGGGTCCGAATAAGCAGGGGGTAGGAAAATTTTCTAAATTCTA ATAAGCGGGGGGGGGTTGGTGGAATAAGACAGGAGTAATTTGAAGACAGA ATTTTTTCAAACTGGTATCAATTTCAACAACAAAAAAGAAACTTTCACAA ATGAACGCGTAAAATAAGAACCAATACTAACAAAAAGGAAAATTTTAACA AGTTTAAGGTCTATCTACACTGGAATAAAATATTGAATTATTCGAATTTA ATTAGCGGGGGATGGATTTTTTTGTCTCTTAACAATTAGCGGGGGGGACG TCTATTAGGGAGACACTCCTATGAATGGAAATACTCGATGACATTTTCTT TTTGCCGCATTCTAGACTGTTCGATTCACAAAATAACGCTCGTGGTGGCT ACAACGCTGGAGGTCTTATCTATTATGAGGGTTCAAAAGTTGTTTTAGAA TGGACCAATCAGCATCAATGCGGTGGAGACAATAATAATTGTGAATTGGT CGTCCAATACATGTGCAGTGACAAATTGAGAAATGGAATCACTGAAAAGT AAGTCAATTTTTAGGATTAAAAAAAAATCAAAATTTCAATTTTCTATGGT TTTTATAGCAAAAAACGAAATGGAAAATTGAAATTTTTTCGAACTTTTGA ACTGATGGATATCTACACGCATTGTAAGTCGATCTGATTTGTGGTTTTCA TGAGGTAATGTTTAATACGGAAGCACCCAAAAGGACCGGGCGTTTGCCAT TAATTTTGGATTTGAACAATAAAACTTGTAACAAACGCCCGGGCTATTAT GAGAACAAAAGATTACGTCATTAATATCATGAATCAAGAATTTCGTCATA TGGTATGCCAGGGAAAAACAGCAACAATTTGCATCAATAAAAATCCTCAT AGTTTATAGATTTGTTTACAACCTTGATCTTGTTATTGTTTGAAGGTTTA GTTTTCAACTTCGGTACGAAATCGAACACAAAATAACAATAATGTAAAAC ATTTGACATTAAATATTTTCATTTTTAGGACCATTCCACAAAAATTGACC GATTGTGAGAAGGATGACTGCGATACTGACCTTGAGTAAGTGACGTCTTT CTCGAAACGTCACAATGACGTCCATCTAACGTCCATTTGACATTCATTTA ACGTTTAATGAACGCTCAAACAACGTTCTATGATTCAGCGGGTCACTGAA TCGGGAGTCTGCATCTGCAACGTATCTCAAAAATAATGTTAGCCTTTTTA AAAAGAATTAATAAATCTTAGCTGAGGTTCAGCTATGATTGAATTAGCTT TCCTTAGTCATTGCTGAAATATGAGGGTTAAATTGTTCATAATTTGTACT CAGTAAGTTTGCGACCACAGTCGAGGTCAACCCGAAGGCTCCCTTTTACT TTAGCTGCCTAATTGAAGGCAGGAGCGCCACTCCTTTCCTTTAATTTCTC CATATACTCTTGATTCTTTGCTTGATTGCAAAGCATCAATTAGAAAGGTA TCAAGTGCCATTTTAAGACCCGGCCAGGACCTTGCACACCGTACTTGGAT TTTCTACTTTTCATACTGCAACCGTTGTTCTTAGGTTTTGGTCAATTTTG AGGCTCATTAACTTAAAAGATTAAACACCTTTTCAACAAATACGTTCTTC CATTTTAGATATGGAATGCATGAAGACCATGCTTATTACGAGCACTGCTA CACACGAAAACGTAACCATGGACTCTACACAGCCGATCAGGTAAATAAAA ACTCGTTCTTGTGTATCCCAGGCTTTATATACGTTACTTATGGACTCCAT AAAATATAATCTGGCGCTATCAGTAAGCATCAAAAAGCTGATAATACGTA GGGGACATGGTTGATTTTTACTACGATGTAGTTCAAAATTTATTAATAAT TTTGAGTATTTCGCGATTCTCAGAATTTCAAGTTCGGGCGAGAATTGCAA TTCCAGTTTACTTCCACTTTATTTAATTAGATATTTCACAATCTTGGAGG GAATAACTTCTAGGTTATATTTACAGCCTTTTTAGAAAAACTTTGAGCTT TAGATACCAAGATGTCAGAGGGCCATAGAAGTTAGAAAATGCTTTTACCA TAACCTAGGTTATGAATTTGATTGGAACGAATACACTTTAATTTCTCCCT TTAAAGGGACATAAAAGTAATAAAATGTAAACATTGCGCGAACTACGTGT CATTAAAGAGAACAATTAAAATCACGTGTCCAAAACAAACTTCTAAAACA ATTGAACAATCAAAATTAGCCATATTTGGTTTGATTTTTTATTTTGACAT GTGACATTTGTTTTGATTTTGTATCCGCTGCATNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNCAATTGAACAATCAAAATTAGCCATATTTGGTTTGATTTTTTATTT TGACATGTGACATTTGTTTTGATTTTGTATCCCGCCTATCCCGCTGCATT CAGTTTGTTTACAAATTTCGTCAGTACTTTTATCTCCCTTTAACTTCTAA TTTGTTATAGGACATGAACAACCGAGCTACAGCCCGTCATACACGACAAG ATAATGGTGGTACCAGATACGGTTATGAATGCCCCGAAGAAAGAGATTAT TATCCTTATTTTGGCCCAACTCCATGGAAGGTGGAACATTTTTTAATTTA GTTTTATATACGACGCTCTGCTATTCGAAACGCTCCCTTCTTTGATGAAA ATTTAATTCCTTTTGAAAATCAACAAAGATGAGAAAAATTGCACTGTAAG GGTGTAAAATTTGGAAAATCTGACCATATTTTGCCAATGAAATTATCAAA TTTTGCAAAATCTTCTCTGCACTGTAAGGGTCCAATTTTAAAGGCCTAAC TTTAGACTGCAGGTCGTTTTTCAATCGAATGCCCTCGGGGATTCTATTCT AGTGTGGACACTCTTTAAAGTAGGAGAGAAGCATGGAATACTGAGAACGA ATAGGTTTTCAGAATTTCACTGATATATTTTTCAATAGCAAAAACATCTT AAGCCAGACAGGAATTGTACCGATACTTTTCTTTGATTCTAGCAACCTTC TAGCAAGGATTATAAATCTTTTGATGTCAGAAATGGAGCCAAGATCATTT TTCCCTTCACTTTGTTCGCTTCATTTTTTTTGACTTATTGGAACATCTTC CAGGTTTTGGATCTGGGAGAGCTACTAATTTTCCAAGCTTAATTCAAAAA CCACTTGAGTTATTAAATTTATGAGGGAATTCCCCCTTTTTTATTAAAAA TTATGGTCAGCCTTGTTAGTGGATTGATTCTCACAAAACCTTTTGCATTT TTAACTTTTCCTTAAATTTCAGGATATCGTTGTGATGACTGGCAACACGG CTCGATGTCCTTATTACAAAGCTGAAAGTCAAAATGTTAAAGCAAGATCT CACTGTGTCTCCAACGTTCATGACCTTCCAAAGGAAGTAAGATCAGACAC CAACAATCTGAATAACCATTTCAAAAAATATCCAGTTCCTCAAACTGAAG AAGAATGCCAGGTTAGATAATTTAAAGATATCTTATTTTTTATGACATAG ACAAGGAAACAAACCTCTTATGCTGACAAATTAGAAAAAATAAAAGAATC TTTAAAATTTTGTGCTCGCGTCACGCCGAGAGGGGAGAAATTCCTTTTTT CTTTTCTTTAAAAAATGCTTTCATGTAACAGGCTAGTAAACGGTAGGAGA TACGTTCCCTTTTTGGGTCTCATGATATAGGGCACAGGCTATATGTCGAT AATATCCGCATTTTCCAATTCAATGTAAATCTGGCTATGGTGAAGAGAGA CCCATGATGAAAAGAACCCAAGTTGGATTTTGAACAACAGGTCAAAATCC AGTCGAATTCAGGGCCTTTCATTCCCTGGAGATTTTGTCTTTTGTATTCA ATGAGTCACTTTTCCAACTTTTCAAATAATTTTAGGATTACGCTAGTACT CTTAAGAAGGATGGTCAAACCTATGAAATCACTGGCGAATGGAAAACAGA AGCCGCATATGGTATCCCTGCTCCAGATTGTATCCAATCTCCTTACTCAC GTGACAATCACCTTGGTAACGGTAAAGGTGGACAACCAAACAGATATGAA TGGACCATTCCCAATGAAATCCATGATCAATGTACTCTCCGTATCAGGTA ATAACATAATTTAATTGAACAAGGTTTGATTTTCATCCATGAGCACATAT TTTAATCAATAAAATATATCTTAGGTCAAATGTTATAAGTATTAGTCAGA TTTTGGTAATGAAGATTCGAAACGATAAATTGGTCAAACAACTCGAGATT TGTGACCATGTTTTTAATTTCAAAGATTTCAATTTAGTAATAATTCATTT TCTACTGTTAAAGCCTGGATTTTCTCCTCTCCATTTATAATCTGACATTT TTTTAACAAAAAATCATTATTCCTTTTTTCAGATACAACATTTCCACTGG AGAATTCCCATGGGAAACTGATTTCAAATCAAGTAAGTATGCGCATAAGA TCCCACATCGATATTGTCCTGAATTTTTCCGAGATCTTTCCACTATTTTT CCCACCATAACCGGCAAGAGATTGGAAAGGGTACGAAAAATCTTGTGTTT ACTCACGAAACCGGCTAACTTTCCGAATCTCTTTTTTCAACTACTCAGAC TCCTGGTCATTTTCCGCTAGAAAAGTGGAATCTAAAGTGGGTAGAAGAAT CTTTTTCAAAACGACGATTTGAATCAAATCAAAGGCCATCAAACCCAGAT AATCAATATTTCAAAAAAAGACATCTGACTCTACATAAATATGTTTTTAA ATCAGCCAAAAATTCCAACGTAATATAATAAACCGTATACTTTGTTCTTG GTAAAAAACATAATGTTTCTTTTTCGAACTTTTAGATGGCCGTAACCGTG GCAACCAACCATGCAAAGCATGTGCAGTAAATCTTGGAGATCAACTCGGT ATTGACGAATGGGATGCGCAAGATCGTGGCTACATTTTGACTGGAAACCC CGATATTTTACCTTTGACTGATGAGAAAGGTGATGTTGAAGAAAAATTCG AATTGAAATTGGCTGTCAACACTGACCAGTATGGTAGAACCTTCGAAGAC AGGTAAATAGATACATATTTGCTAGATGGCCAAATGGTTAAAGGCGTCAA TGTTTAAAAACCAGGGGCTCGCAGCTCGAATCCCCCTCTGTCACTTGTTC CAAAGTTCCGTTCAGTTCAGAAACAGCCGAGACGTAAAGACGAATAGATT CATTCGCTTGATGGCCAAAGGCGTCTTAAACAGGGGATTCGTGGTTCAAA TCGCCTTCTCCTTTCAATGTTCCTTTCAGTTCATCAGACTGTGGAATCCG TGAAAACAATCGAGAGACTGAATTTATTTTGACCATTCAAATTTCCTTAT CGTTTAATTATACTTATAAGTGTTTTAAGCTCTTTTTACTTTTCGTACGA ATTTCAGTCTCGATGAAACGTAGAAGGTGACATTTCTATCCGTAAATTTA TCAAATAATCTACAATATTCTAAAAATGATTCCTCAAAAGTCTGGAGAAA AACCTGGACTAATAGACCTTATCGGAGTTTTTGATTCTTCTAAAAAAGCG ATGCATTGTGGGATTGTTTCGAGTGTATTATAATAGAAATCTCTTAGGAA TTCCTTGAGGGAATTCTATTGTAATACACTCGAAACAATCCCACAATGCA TCGATTTTTTTTAAAAATCAAAAACTCTGATAAGGTCTATTATTGAGTAA AGTTAAAGTTTCGCCTGATAACTTTGTATTGATTATTGCGATTATTATAG ATCCCATATGTTTGCCATTCGTGAACGACCAGCCGGTGTCCCTGCAAACG CTGTCATCCACAATCTGGAAGTGAAGGGAAAACGAGGAAACATTGTGCAA ACCTTCCCAGCTACCGAGTATGATTTCCACCATTTTTCAACTTGCCAAGA AGTCAAACAAGGAGATTACATTCATGTCCAGTAAGTCCAAATATCTTGAC CACGTAATGAAGATTCTAGATAGCCTAGGTTTCTATGCTGTAAACTTGTT ACTTTTATTTCGAAGTTTTAATGGTTTACAGGCTAGTTCCTAAATCGATA TGCATTCTAAAATAACATCGATTTCAGGGCTCGATTCAAAACTTCACTTA TTTCCCATCCAGAACACTTGACCCATGTGTTTTTCAAACAAAATTTCCAA ATGCGGGGCAAACTTAAGGCTTCACTTTTTCAATAAGATAGCTTGAAGCT CATTTCTAGCCCCTTCGTGTCTTCACACTCAATGTAAAATAAGTTGCTAG TCCATACAATTTTCAACAATTAAATTTCCACCGGCGGCCATATATTTAAA ATATGTAATGTTGAAATGTAACGTTTAGTTGGACCGGTTCAGACGACAAT CCTAATAACAACGCTGGTCAAGGAGAGGCTGGTACTGACAGATCAAACAT TGTTCTTCTTGAAGACAAAGTCTATTCATACCCATCCACTAATTTCGGAA GAAGTTATCCAAAGAACATTTCCAAAGCAAGCTTCTTGGGATTCAGTTAT GAAGATGCACAGCTTTTAGCTATGGCCGGACCACGTAAGCGTTTTATTTT ATTATTCAATAAAAAAAAAGACTTATCTGTGTCTTTTCGTAAAAGCATGA TTCGAGCCAAAGCCTAACCTAGCTGTTGAATGTGAGAAAGTCGACACGAA TACTTGAAAAATATATAAACAAAGTTTAGGCTAGAGTTAGTAAGTTTCGA CCACAAGCGAAGGCGGCCCAAAGGCAGCTTTGAATGTATGGGAAGGTGCC GCATTTTTCCAACTACCCTTAACCCTTCTCTTTAGTTGCTAAGCATCAAA CAAAGACCATTTTTTAGATCTTGGGTATGACCTTTGAGTCAAACCCACAA ACTTGTACACCGTAGTAGTGTACCAACTGAGATGCTACGGTAATAAAGGG GGAAATGGGATTCTCAACTCAACTCAATTTTTTGCTTTTTCTATAGACAC TGGTGGAGATATTGAAGAGTTGGATGAGAATGGTCCAAGCTTTGATCTCG GAATAAGAAAAATGGATAAACCAGGAATTTACAGGTAACATCAAGTTTTG ATTCACTGTCAAGTTTATTTCTATGTTCTCAAATTATTCTCTGGATCAAT TTCGCGACTAGTCCTAGCGGTTTGACAGGTAATGACGGCCCGTGTGAGCT TCTTTTAATCCTCTTAACAAACATTTCTAATGAATAGTATCTATAGAGCA TCCAACTTCCATTTACATAGATCCCGTAACAAGAATATGCAAAATTTACT ATCCTTTTTTTCTTCCAAATTTTTTTCACTTTTAGATTCTTGTGTACTCG TAACAACAACTTCACTAACCGTGGACAAAAGGGTTGCATCAAGGTCGTTG CCAGTGCTGCTGGTGATGCTCCAGAAAAGTAGGTTCCTTTTTTGCCCTTT CTAAAGGCCGGTCTCCATTTTCGCGCGACATGAGCGAAAACTTTTTGACA TTTTTGTAAGGTCGGTTGAAAAATTCCAAAATTGATTAACGATTGAAAAA AGTTGAACTTGATCTTTTCTTTAGGCAAAAAGGCTTAGATTAGAAAAAAA CTGTTACTCATTTCATTTTCCCATTTCAATATCTTTCCGAAATTTTTTTA AAAGTCAATAACAGGGAGGGCCTTTATTTGTGATCTTAGAGTACCTAAAT ACACAAATAAAATAGCTAGCCATGTATTTCTGAAAGTGGACAGAGGCAGT AGATTACATTGAAACTTTCCTCTTATTCCAACCCTTAGCGGGACTAATAA TCAATTTTCAGATTTGTTAGACACTTAAAGGGACTTAAAGGGGCTTCCAG CTTCAAAAGAGAGGGCCACAACCCCCTACTTTTCACTTACTTAGATATCC TCGGGGATTCGTCCAATTGTCAAAATTCTAAATAGAGAATTTTAGAAAGA AATCGATAAGTTTTTACTTTATTCATGTTCATGCTTTCTTTTATTTCAAT AGATTCCCTGAAGAGAGCAATGACGTTAATGATGCGTTAAAAACAGTCGA AGCGGAAATGATGAAAGATTTGAACATGTCTTAAGTGTCCGAGATTTAAT TTGATGTCCGGCAATCGAATAATATAGATTTTCTCTTGTTATAACAAAAT GAATTGGCATAATGATATCATAAACTTTAGACGTAGTATGTTTCTTTAGT ATGAGTACACTAAGTGTATAGAAATATTTCTATTCTAGACGCTTCCAGGG TTTTTAATACCTTTTGGAATCCCTATAAAATCTAAATACTCTCGTACGAA ATCTGTACTGGTTTTCTTGTGGACTTTTTCTCGATATAATTGACTTATAC TATACTATTATTATTTGATAATATACTATTTTATGTTTTATTTATTTATA GTAAACTGGGTTGTAATTTTTTTGATAATTTCTTTAATAAAGTTTCATTA CTATTCATGACAGATGCAGATACTTTTGTCTTTATCATTTGCACGCTTTT TTTTATAAGAGCATCCAAAAATTTTTGAAACCTTCGGGTGTTCTTAACTT TTTGAGTTTTAAGCCTTAAAAATGTTCTTAATATGTTCTTATTTTCACCA TATTTTGAGCATTTTTGTTCATTTTTCCTAAGAAATTGGGTGTTTAAGAG TTGCAAAGCTTTAAAATGTTCTTAACTTGTTCTTAACATTTTGGCCATCG AAGCCTTATGTTCTTATATAGTTTGTTTTTATAAAGAACGTGTATCCTTC CTATTGGAAAATTTAAAATTAAGGTATTGTTATCAATATCAACAAATCGT GACTATTTTTGACCAATTTCTTCGAGTATCAGGGACTCTAACATCGGTTG TTGACTTCATTAGCAAAGGGAACTTCCAGCTTTACAAAGCAATCTTAGCA ATATCTTCAAGTTAGAAGCATATTTTCCGGGGTAAAAAATTTCGATTTTG ACTGGGTTTTAATTATCCGCTTAAAATTAGGTAATTTCTTTCTCACCGGG TTATCCACCGGGGCGGATCCCACCGGGTCACTGATACAAGGGTATCAAAA AAACTGGTAGCCAACACCATGATAACTACCGCAATCTTTATCTAAGTTTA CCAGACTACATATTCTCACAATATTAGTACTTCAATAATTTAGGCCCAAC CCAATGATTAACACATCGCAAATATAACTCAGCTCCGACCCCAAAATTAA AGAACAATGAAAAAGAGAGTATATAAGGCGAGTCGATGAGATCAAAGTGA GCAGTCGGATGATTTCATCAATATAAAAAAAATGGTGAATTTTCAAGGAA AAGCTACATCAGGCATTCTTTTGCTTTGTCTGTGTACAACTTTGGTAAAC TCCCTTCGTCCAGCGATTTCCATCGACGTGATCAATTCTGCGTGTAAAAC AAAGGCATCTTCAGAGTGCATCAATGTTGTAGAATCTATCGCAGTCTACA CAGAATGCTGGAAAAGAGAATTCAGAAATTGCAATCGTGGTTTTAGTGCT CTCAATCGGCTTTCTGGTCATTGTGTCAAGGTCAAGAAAGAATCAATCAT TTGTTATCTTGACGAAGATGAAGTTGAACAATGTTTTAATGCAGTATATA CAATTGAACAATGTAGCAATTGATCATTCAGAGGCCCTCGTCTTTATCCC ATCACTTGACACAATCAAGAAAAAAGCTAAAATTGGTTACCAATTTCAAT CACCCGACAAGCCTTAAATATTTCCCGAAACCCTGGCTTAGCGATGTCAA ACACGTTTTCTTAGCTTTATTTTTTAATTTAATCATAATATAAACTCATG TACACTATTGA

Coding sequence (CDS) from alignment at sc0000052:313030..324640-

>TCONS_00005331 ID=TCONS_00005331|Name=TCONS_00005331|organism=Clytia hemisphaerica|type=CDS|length=1896bp|location=Sequence derived from alignment at sc0000052:313030..324640- (Clytia hemisphaerica)
ATGACGAGTTGGACATTGTCGGCGCTGCTGGTCTCAGTGCTTGTTGTTGC
ATCATACGCAGATGTCTACATGCAAAATATGAGAGGAAGCAACAATCGTT
TGAATGGAAAAGGTCGAGACCGTCAAAACGCAAACAGACTGTTCGATTCA
CAAAATAACGCTCGTGGTGGCTACAACGCTGGAGGTCTTATCTATTATGA
GGGTTCAAAAGTTGTTTTAGAATGGACCAATCAGCATCAATGCGGTGGAG
ACAATAATAATTGTGAATTGGTCGTCCAATACATGTGCAGTGACAAATTG
AGAAATGGAATCACTGAAAAGACCATTCCACAAAAATTGACCGATTGTGA
GAAGGATGACTGCGATACTGACCTTGAATATGGAATGCATGAAGACCATG
CTTATTACGAGCACTGCTACACACGAAAACGTAACCATGGACTCTACACA
GCCGATCAGGACATGAACAACCGAGCTACAGCCCGTCATACACGACAAGA
TAATGGTGGTACCAGATACGGTTATGAATGCCCCGAAGAAAGAGATTATT
ATCCTTATTTTGGCCCAACTCCATGGAAGGATATCGTTGTGATGACTGGC
AACACGGCTCGATGTCCTTATTACAAAGCTGAAAGTCAAAATGTTAAAGC
AAGATCTCACTGTGTCTCCAACGTTCATGACCTTCCAAAGGAAGTAAGAT
CAGACACCAACAATCTGAATAACCATTTCAAAAAATATCCAGTTCCTCAA
ACTGAAGAAGAATGCCAGGATTACGCTAGTACTCTTAAGAAGGATGGTCA
AACCTATGAAATCACTGGCGAATGGAAAACAGAAGCCGCATATGGTATCC
CTGCTCCAGATTGTATCCAATCTCCTTACTCACGTGACAATCACCTTGGT
AACGGTAAAGGTGGACAACCAAACAGATATGAATGGACCATTCCCAATGA
AATCCATGATCAATGTACTCTCCGTATCAGATACAACATTTCCACTGGAG
AATTCCCATGGGAAACTGATTTCAAATCAAATGGCCGTAACCGTGGCAAC
CAACCATGCAAAGCATGTGCAGTAAATCTTGGAGATCAACTCGGTATTGA
CGAATGGGATGCGCAAGATCGTGGCTACATTTTGACTGGAAACCCCGATA
TTTTACCTTTGACTGATGAGAAAGGTGATGTTGAAGAAAAATTCGAATTG
AAATTGGCTGTCAACACTGACCAGTATGGTAGAACCTTCGAAGACAGATC
CCATATGTTTGCCATTCGTGAACGACCAGCCGGTGTCCCTGCAAACGCTG
TCATCCACAATCTGGAAGTGAAGGGAAAACGAGGAAACATTGTGCAAACC
TTCCCAGCTACCGAGTATGATTTCCACCATTTTTCAACTTGCCAAGAAGT
CAAACAAGGAGATTACATTCATGTCCATTGGACCGGTTCAGACGACAATC
CTAATAACAACGCTGGTCAAGGAGAGGCTGGTACTGACAGATCAAACATT
GTTCTTCTTGAAGACAAAGTCTATTCATACCCATCCACTAATTTCGGAAG
AAGTTATCCAAAGAACATTTCCAAAGCAAGCTTCTTGGGATTCAGTTATG
AAGATGCACAGCTTTTAGCTATGGCCGGACCACACACTGGTGGAGATATT
GAAGAGTTGGATGAGAATGGTCCAAGCTTTGATCTCGGAATAAGAAAAAT
GGATAAACCAGGAATTTACAGATTCTTGTGTACTCGTAACAACAACTTCA
CTAACCGTGGACAAAAGGGTTGCATCAAGGTCGTTGCCAGTGCTGCTGGT
GATGCTCCAGAAAAATTCCCTGAAGAGAGCAATGACGTTAATGATGCGTT
AAAAACAGTCGAAGCGGAAATGATGAAAGATTTGAACATGTCTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003034XLOC_003034Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005331-proteinTCONS_00005331-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005331-exon-sc0000052-1575043694:324541..324640TCONS_00005331-exon-sc0000052-1575043694:324541..324640Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1575043694:323588..323691TCONS_00005331-exon-sc0000052-1575043694:323588..323691Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1575043694:323208..323261TCONS_00005331-exon-sc0000052-1575043694:323208..323261Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1575043694:322543..322725TCONS_00005331-exon-sc0000052-1575043694:322543..322725Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1575043694:322006..322062TCONS_00005331-exon-sc0000052-1575043694:322006..322062Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1575043694:321351..321432TCONS_00005331-exon-sc0000052-1575043694:321351..321432Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1575043694:320211..320330TCONS_00005331-exon-sc0000052-1575043694:320211..320330Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1575043694:319330..319518TCONS_00005331-exon-sc0000052-1575043694:319330..319518Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1575043694:318694..318905TCONS_00005331-exon-sc0000052-1575043694:318694..318905Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1575043694:318359..318408TCONS_00005331-exon-sc0000052-1575043694:318359..318408Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1575043694:317739..317955TCONS_00005331-exon-sc0000052-1575043694:317739..317955Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1575043694:316861..317040TCONS_00005331-exon-sc0000052-1575043694:316861..317040Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1575043694:316257..316462TCONS_00005331-exon-sc0000052-1575043694:316257..316462Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1575043694:315757..315844TCONS_00005331-exon-sc0000052-1575043694:315757..315844Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1575043694:315413..315505TCONS_00005331-exon-sc0000052-1575043694:315413..315505Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1575043694:313030..314838TCONS_00005331-exon-sc0000052-1575043694:313030..314838Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1510915933:324541..324640TCONS_00005331-exon-sc0000052-1510915933:324541..324640Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1510915933:323588..323691TCONS_00005331-exon-sc0000052-1510915933:323588..323691Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1510915933:323208..323261TCONS_00005331-exon-sc0000052-1510915933:323208..323261Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1510915933:322543..322725TCONS_00005331-exon-sc0000052-1510915933:322543..322725Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1510915933:322006..322062TCONS_00005331-exon-sc0000052-1510915933:322006..322062Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1510915933:321351..321432TCONS_00005331-exon-sc0000052-1510915933:321351..321432Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1510915933:320211..320330TCONS_00005331-exon-sc0000052-1510915933:320211..320330Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1510915933:319330..319518TCONS_00005331-exon-sc0000052-1510915933:319330..319518Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1510915933:318694..318905TCONS_00005331-exon-sc0000052-1510915933:318694..318905Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1510915933:318359..318408TCONS_00005331-exon-sc0000052-1510915933:318359..318408Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1510915933:317739..317955TCONS_00005331-exon-sc0000052-1510915933:317739..317955Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1510915933:316861..317040TCONS_00005331-exon-sc0000052-1510915933:316861..317040Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1510915933:316257..316462TCONS_00005331-exon-sc0000052-1510915933:316257..316462Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1510915933:315757..315844TCONS_00005331-exon-sc0000052-1510915933:315757..315844Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1510915933:315413..315505TCONS_00005331-exon-sc0000052-1510915933:315413..315505Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1510915933:313030..314838TCONS_00005331-exon-sc0000052-1510915933:313030..314838Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1491911889:324541..324640TCONS_00005331-exon-sc0000052-1491911889:324541..324640Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1491911889:323588..323691TCONS_00005331-exon-sc0000052-1491911889:323588..323691Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1491911889:323208..323261TCONS_00005331-exon-sc0000052-1491911889:323208..323261Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1491911889:322543..322725TCONS_00005331-exon-sc0000052-1491911889:322543..322725Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1491911889:322006..322062TCONS_00005331-exon-sc0000052-1491911889:322006..322062Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1491911889:321351..321432TCONS_00005331-exon-sc0000052-1491911889:321351..321432Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1491911889:320211..320330TCONS_00005331-exon-sc0000052-1491911889:320211..320330Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1491911889:319330..319518TCONS_00005331-exon-sc0000052-1491911889:319330..319518Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1491911889:318694..318905TCONS_00005331-exon-sc0000052-1491911889:318694..318905Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1491911889:318359..318408TCONS_00005331-exon-sc0000052-1491911889:318359..318408Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1491911889:317739..317955TCONS_00005331-exon-sc0000052-1491911889:317739..317955Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1491911889:316861..317040TCONS_00005331-exon-sc0000052-1491911889:316861..317040Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1491911889:316257..316462TCONS_00005331-exon-sc0000052-1491911889:316257..316462Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1491911889:315757..315844TCONS_00005331-exon-sc0000052-1491911889:315757..315844Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1491911889:315413..315505TCONS_00005331-exon-sc0000052-1491911889:315413..315505Clytia hemisphaericaexon
TCONS_00005331-exon-sc0000052-1491911889:313030..314838TCONS_00005331-exon-sc0000052-1491911889:313030..314838Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000052supercontigsc0000052:313030..324640 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
638.51 577.782 482.776 557.554 221.621 197.935 98.0381 135.853 67.8247 87.3292 64.3774 52.3756 55.2902 68.7571 0.299794 0 95.0095 83.1164 73.1761 129.585 207.355 193.538 315.179 349.502 282.204 203.947 92.9446 53.4676 81.6951 107.217
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005331 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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