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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005586 ID=TCONS_00005586|Name=TCONS_00005586|organism=Clytia hemisphaerica|type=transcript|length=1137bp
CTACCGCGTGTTTCTTTCGAAAAAACTTTGATTTATGGTTAGTGTAGTTC
AGATCTGTCAAAAAATGGATAAAACGATAGATATTTGCAAATCATACGTT
ATTAATCATTCTTAATGGACTAAAAAAATGTCATGCGCCGCAATCTTAAG
CACGTCAAACTATGGTTTTAATGTGGCAGCTACCATCCTATTTGGTTTGT
CAGCAATTATTACAACCTTGGGAAACACTTTCTCCTTGATGGTTCTTTGG
CAGCCGTCACAGCgatcaaaatcaaacaaaattctAACATCGTTAGTAAT
TAGTGATTGTTTGGTTGGTTTGTTATCAAATCCCATGGCCATATCGATGA
TGTGGACTGATCTGGAAATTACACCTTCAATTTGTAGATTAAACACTATA
GCACTTTTCTTTGTTACCTGGTTTAGTTCTTCATCAGGCTTTACAATACT
TTTTATTACCTACGATCGCTTTACAAGCATCACAAAACCGTTCAAATACC
ATGACATTATCACCCATCTTAAAATCAATCTAATTCTTGTGGCGATTTGG
ATTAGTAACTCAGTAACGGCACTTTTAAATGGATTCAACAAGAAATTTTT
CCTATATTTTATTATCATTAGTTTAGTCATCGGATATACTATCTTAATTG
CGGGATATTATCAGATCTGGAAAGCCGTCAACCAACGGCAAACCAACATC
CTATCGCTTAGTAGGAACGACCAAGAACATCTACGGACCCATATCCGACT
CGCTAAGAAAATATTATTACTTATGATTGCGTTATTTGGTGCTACCCTCC
CAATAGTTGTTTATGCAATCGTTGTGTTGTTTCTTGATCATTTTACACGC
CCTTATCAACCGTACTTGCACGTTGCTGGGattttctttctccttttcaa
CTCTTGTGTTGACCCTTGCATTTACATTTGGAAAGATCGTGAATTCAAAC
GTGCctgtaaaagatttcttcgTAGGAACACAGCCTTTGCTTGGCTTTTC
AACGGTGTTACGGTCAATCCCATAGCAGTAATTTCTTGATAAATAAACCT
TCCCCAAATGTTTTTACATGGTTCAAACTACATCCTTCCCTACAATATTC
ACGTGGAAAGCCTACTACTGTAATGACTTTCAGATTT Run BLAST on NCBI transcript from alignment at sc0000054:416789..417925+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005586 ID=TCONS_00005586|Name=TCONS_00005586|organism=Clytia hemisphaerica|type=transcript|length=1137bp|location=Sequence derived from alignment at sc0000054:416789..417925+ (Clytia hemisphaerica)
CTACCGCGTGTTTCTTTCGAAAAAACTTTGATTTATGGTTAGTGTAGTTC
AGATCTGTCAAAAAATGGATAAAACGATAGATATTTGCAAATCATACGTT
ATTAATCATTCTTAATGGACTAAAAAAATGTCATGCGCCGCAATCTTAAG
CACGTCAAACTATGGTTTTAATGTGGCAGCTACCATCCTATTTGGTTTGT
CAGCAATTATTACAACCTTGGGAAACACTTTCTCCTTGATGGTTCTTTGG
CAGCCGTCACAGCgatcaaaatcaaacaaaattctAACATCGTTAGTAAT
TAGTGATTGTTTGGTTGGTTTGTTATCAAATCCCATGGCCATATCGATGA
TGTGGACTGATCTGGAAATTACACCTTCAATTTGTAGATTAAACACTATA
GCACTTTTCTTTGTTACCTGGTTTAGTTCTTCATCAGGCTTTACAATACT
TTTTATTACCTACGATCGCTTTACAAGCATCACAAAACCGTTCAAATACC
ATGACATTATCACCCATCTTAAAATCAATCTAATTCTTGTGGCGATTTGG
ATTAGTAACTCAGTAACGGCACTTTTAAATGGATTCAACAAGAAATTTTT
CCTATATTTTATTATCATTAGTTTAGTCATCGGATATACTATCTTAATTG
CGGGATATTATCAGATCTGGAAAGCCGTCAACCAACGGCAAACCAACATC
CTATCGCTTAGTAGGAACGACCAAGAACATCTACGGACCCATATCCGACT
CGCTAAGAAAATATTATTACTTATGATTGCGTTATTTGGTGCTACCCTCC
CAATAGTTGTTTATGCAATCGTTGTGTTGTTTCTTGATCATTTTACACGC
CCTTATCAACCGTACTTGCACGTTGCTGGGattttctttctccttttcaa
CTCTTGTGTTGACCCTTGCATTTACATTTGGAAAGATCGTGAATTCAAAC
GTGCctgtaaaagatttcttcgTAGGAACACAGCCTTTGCTTGGCTTTTC
AACGGTGTTACGGTCAATCCCATAGCAGTAATTTCTTGATAAATAAACCT
TCCCCAAATGTTTTTACATGGTTCAAACTACATCCTTCCCTACAATATTC
ACGTGGAAAGCCTACTACTGTAATGACTTTCAGATTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005586-exon-sc0000054-1491911889:416789..417925 | TCONS_00005586-exon-sc0000054-1491911889:416789..417925 | Clytia hemisphaerica | exon |
| TCONS_00005586-exon-sc0000054-1510915933:416789..417925 | TCONS_00005586-exon-sc0000054-1510915933:416789..417925 | Clytia hemisphaerica | exon |
| TCONS_00005586-exon-sc0000054-1575043694:416789..417925 | TCONS_00005586-exon-sc0000054-1575043694:416789..417925 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000054 | supercontig | sc0000054:416789..417925 + |
Blast
The following BLAST results are available for this feature:
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