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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005692 ID=TCONS_00005692|Name=TCONS_00005692|organism=Clytia hemisphaerica|type=transcript|length=1236bp
CTGTACTTTTGTCAAGTGCAGCGGAAAGTGaatatttgtaaattttatca
atattttcgtcaaaatatcgaTTAATGAtgagaaattttgctgattatCG
TATCAATTCCTCCGAGGAATATCGTTTGATGTATCTACATGAAgtagatc
aaaacaaaaaattgaaattggtcAATGAAGACCAAGAAACAACCATTGAA
GACTTACGCAAACAACTTACCGCAATGACGGCGAAATTTGCGCAAAGTCA
AAACAACACTGAAGTTCTTGAAGAGAAGCTTCAAAAACAAACTCAAAAAG
CGAGCTACTTCGAAGAGAAGCAGGTAGAGAATGAAAAAAAGATTGCTGAA
GTCACAAAAGAGTGTCAAAAGCAAGAAGAACGTGTCATCAAGGTGAAGGC
ATTGAGCGCTGAAATGTTGGACGAATTAGACAAAGCTGATCGTAAGATCC
AATCGTTGGAATCTCGTGTCGACAAACAAGCTGACTTCATCACGCAAAAG
TCGTTCATTAATAAGGAGCTCTCTCAACAGGTCAAAGACCTTAAGAAGTC
ATGCAAAGTGGCTGAAAAGAAATCAGCAAAAGACACCATGCTGATCCGAC
GATTAAAGGTGACTGTGTTCCAACAACAAAACACTATCAAAATGTATGAG
GACTTCAAATCTCGCTTCGAAGCCCGCGAAAACAAAATCCTTCTCAAGCT
AGGAGAATTGACGTTGCACCAAGAAGGAAAATCTCGTGACTTTTTCAGCT
TTCGTCAGGAAAGTCAAAGTCAATGGCTAGTGAAAAGCATCAATGCTTTG
TTCGAAAGTAACATCCTCTCCCGCGTTGAAACACACCTTGCAGCCGAATC
GAACGAACGCTTGATTTGAGTTTGTAAAAAGAATTGGATGTCAGGTCAGG
ATGGACACCATCTAGATCCCTGCTATCGGCCAAGCTAAAATCCGGTACAA
CCTGTGCAGCATCTAACAACATCTAATCCGTCTTTCGAGATCATCATAAG
AGAACATCATAAGAGTAGACGAACACAACATCAAGGCCCGTTTTTCGAGA
TCTGTGAACTTCAAGAACATCAAAATAGAAGACGGAACGCAACATCGACT
TTCGAACGACCATCCATCGTCTTTCGAGATCGATGAGCTTCAAGAACAAA
GATGCTGACGGACGCAACACCAAGCCAGTCATCAATCTTTGTAAAACCTT
TCAATTTTCCAGCTAATGAAAGAAATAATATCtaca Run BLAST on NCBI protein sequence of TCONS_00005692-protein >TCONS_00005692-protein ID=TCONS_00005692-protein|Name=TCONS_00005692-protein|organism=Clytia hemisphaerica|type=polypeptide|length=264bp
MMRNFADYRINSSEEYRLMYLHEVDQNKKLKLVNEDQETTIEDLRKQLTA
MTAKFAQSQNNTEVLEEKLQKQTQKASYFEEKQVENEKKIAEVTKECQKQ
EERVIKVKALSAEMLDELDKADRKIQSLESRVDKQADFITQKSFINKELS
QQVKDLKKSCKVAEKKSAKDTMLIRRLKVTVFQQQNTIKMYEDFKSRFEA
RENKILLKLGELTLHQEGKSRDFFSFRQESQSQWLVKSINALFESNILSR
VETHLAAESNERLI Run BLAST on NCBI transcript from alignment at sc0000054:283328..284563 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005692 ID=TCONS_00005692|Name=TCONS_00005692|organism=Clytia hemisphaerica|type=transcript|length=1236bp|location=Sequence derived from alignment at sc0000054:283328..284563 (Clytia hemisphaerica)
tgtaGATATTATTTCTTTCATTAGCTGGAAAATTGAAAGGTTTTACAAAG
ATTGATGACTGGCTTGGTGTTGCGTCCGTCAGCATCTTTGTTCTTGAAGC
TCATCGATCTCGAAAGACGATGGATGGTCGTTCGAAAGTCGATGTTGCGT
TCCGTCTTCTATTTTGATGTTCTTGAAGTTCACAGATCTCGAAAAACGGG
CCTTGATGTTGTGTTCGTCTACTCTTATGATGTTCTCTTATGATGATCTC
GAAAGACGGATTAGATGTTGTTAGATGCTGCACAGGTTGTACCGGATTTT
AGCTTGGCCGATAGCAGGGATCTAGATGGTGTCCATCCTGACCTGACATC
CAATTCTTTTTACAAACTCAAATCAAGCGTTCGTTCGATTCGGCTGCAAG
GTGTGTTTCAACGCGGGAGAGGATGTTACTTTCGAACAAAGCATTGATGC
TTTTCACTAGCCATTGACTTTGACTTTCCTGACGAAAGCTGAAAAAGTCA
CGAGATTTTCCTTCTTGGTGCAACGTCAATTCTCCTAGCTTGAGAAGGAT
TTTGTTTTCGCGGGCTTCGAAGCGAGATTTGAAGTCCTCATACATTTTGA
TAGTGTTTTGTTGTTGGAACACAGTCACCTTTAATCGTCGGATCAGCATG
GTGTCTTTTGCTGATTTCTTTTCAGCCACTTTGCATGACTTCTTAAGGTC
TTTGACCTGTTGAGAGAGCTCCTTATTAATGAACGACTTTTGCGTGATGA
AGTCAGCTTGTTTGTCGACACGAGATTCCAACGATTGGATCTTACGATCA
GCTTTGTCTAATTCGTCCAACATTTCAGCGCTCAATGCCTTCACCTTGAT
GACACGTTCTTCTTGCTTTTGACACTCTTTTGTGACTTCAGCAATCTTTT
TTTCATTCTCTACCTGCTTCTCTTCGAAGTAGCTCGCTTTTTGAGTTTGT
TTTTGAAGCTTCTCTTCAAGAACTTCAGTGTTGTTTTGACTTTGCGCAAA
TTTCGCCGTCATTGCGGTAAGTTGTTTGCGTAAGTCTTCAATGGTTGTTT
CTTGGTCTTCATTgaccaatttcaattttttgttttgatctacTTCATGT
AGATACATCAAACGATATTCCTCGGAGGAATTGATACGataatcagcaaa
atttctcaTCATTAAtcgatattttgacgaaaatattgataaaatttaca
aatattCACTTTCCGCTGCACTTGACAAAAGTACAG Coding sequence (CDS) from alignment at sc0000054:283328..284563 >TCONS_00005692 ID=TCONS_00005692|Name=TCONS_00005692|organism=Clytia hemisphaerica|type=CDS|length=795bp|location=Sequence derived from alignment at sc0000054:283328..284563 (Clytia hemisphaerica)
TCAAATCAAGCGTTCGTTCGATTCGGCTGCAAGGTGTGTTTCAACGCGGG
AGAGGATGTTACTTTCGAACAAAGCATTGATGCTTTTCACTAGCCATTGA
CTTTGACTTTCCTGACGAAAGCTGAAAAAGTCACGAGATTTTCCTTCTTG
GTGCAACGTCAATTCTCCTAGCTTGAGAAGGATTTTGTTTTCGCGGGCTT
CGAAGCGAGATTTGAAGTCCTCATACATTTTGATAGTGTTTTGTTGTTGG
AACACAGTCACCTTTAATCGTCGGATCAGCATGGTGTCTTTTGCTGATTT
CTTTTCAGCCACTTTGCATGACTTCTTAAGGTCTTTGACCTGTTGAGAGA
GCTCCTTATTAATGAACGACTTTTGCGTGATGAAGTCAGCTTGTTTGTCG
ACACGAGATTCCAACGATTGGATCTTACGATCAGCTTTGTCTAATTCGTC
CAACATTTCAGCGCTCAATGCCTTCACCTTGATGACACGTTCTTCTTGCT
TTTGACACTCTTTTGTGACTTCAGCAATCTTTTTTTCATTCTCTACCTGC
TTCTCTTCGAAGTAGCTCGCTTTTTGAGTTTGTTTTTGAAGCTTCTCTTC
AAGAACTTCAGTGTTGTTTTGACTTTGCGCAAATTTCGCCGTCATTGCGG
TAAGTTGTTTGCGTAAGTCTTCAATGGTTGTTTCTTGGTCTTCATTgacc
aatttcaattttttgttttgatctacTTCATGTAGATACATCAAACGATA
TTCCTCGGAGGAATTGATACGataatcagcaaaatttctcaTCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005692-exon-sc0000054-1491911889:283328..284563 | TCONS_00005692-exon-sc0000054-1491911889:283328..284563 | Clytia hemisphaerica | exon |
| TCONS_00005692-exon-sc0000054-1510915933:283328..284563 | TCONS_00005692-exon-sc0000054-1510915933:283328..284563 | Clytia hemisphaerica | exon |
| TCONS_00005692-exon-sc0000054-1575043694:283328..284563 | TCONS_00005692-exon-sc0000054-1575043694:283328..284563 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000054 | supercontig | sc0000054:283328..284563 . |
Blast
The following BLAST results are available for this feature:
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