TCONS_00005919 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005919
Unique NameTCONS_00005919
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1312

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005919 ID=TCONS_00005919|Name=TCONS_00005919|organism=Clytia hemisphaerica|type=transcript|length=1312bp
GcagatttttgataaaaataaaacatagaTTGAAAATGACGAAGACAATT
GTGTTTACGCTACTTATGCTATTTGTTTTCCAAGTAATCGAGGCATCCTC
TGACGATTGTCCAGATGGCATTCGAGATATCGCTATTGTCTTTGAGACAC
CACGTGCTCGCGCTATGTCTGAAGTCGAGGATTTGAAACGTTTATACGTA
TCCCTGCACAAGAATGATACAGCCTCACTCAAATGCATTCACTATTCTCT
GGTGGTGGCTGATGACATCATTGATATCATACAATCACTTGATTGTCAAT
CAAAAagatgttttgaccaatcattGGAAGCCCTTGATAAAGTAACAGAG
AAATTATCCAATGACGTTGCACAAGAtGGAGACGAGTACAAGAGGAACTT
CATCAAATCCATCCAAGACATTAACACTACCATATTCTCTGAGAACGCTG
GTGGTCGACCACAAGCAGAAAAGACGGTACTGTTATTGCTGACTCAGGGA
AAACATGAAGATCATTCTATCACAAAAGTAGCTTCTAAACTTCTTAATGA
CCCAAAATTCCACGTCTTAGCTGTTGGAATTGGTAAAAAAGCAAGAAACG
AAGAACTAATTGGAGCTGCAAAATATCCAAATAGAATTTTATCGGTTAAC
ACAATCCGAGAATTATTTCCCGGTAAACCCGGTTATGACATAATTTACAG
ATTACTTGAAAATCCTTCATACGATCGATTCGCCGTTCAAAACATCCCAA
AGCAACTTGATGAATGTGATTTCGTTGCAGAcgttggatttttgattgat
gCTTCGAATAGTATAAGGGAAGACTATTTGTCCGAATTACAGTTCGTCAA
ACTCGTAACTGCAAGTTATGGTATCTCCAAAGAAGGGTCACACGCCGGAG
CAGTCATCTACAGTGATTTTGGGCGTTTCAGCACAGCATCTATCAAATTC
ACTGATCACTTCTCCACGCCGAGTTTCTTGAAATCAGTGGAAAAAGTGGA
GCATTTTGGATTCAGGACGCGTATTGATTTGGCTTTCTTAGTAGCCCAAG
ATCAATTATTCACTGTCAAAGGAGGTATGAGACCAGGTAAGCAAGTCAAG
AAGATTATCTACCTCATCACAGACGGCGAACAAAATCCAAAGAGATCTGG
TAACAGAATCCTCGATCCTGTCGCAGCATCGCAAAAGTTTTATGACGACG
GTGTTATCATTTTTGCGATCGGGGTCGGTCCACTTGTTAATAAAGATGAG
TTAGAGAGAATCACAAGAGATCCGTCGCGAGTTTTCTTGGCTAACCATCC
AAACGAATTGGC
Run BLAST on NCBI

protein sequence of TCONS_00005919-protein

>TCONS_00005919-protein ID=TCONS_00005919-protein|Name=TCONS_00005919-protein|organism=Clytia hemisphaerica|type=polypeptide|length=436bp
RFLIKIKHRLKMTKTIVFTLLMLFVFQVIEASSDDCPDGIRDIAIVFETP
RARAMSEVEDLKRLYVSLHKNDTASLKCIHYSLVVADDIIDIIQSLDCQS
KRCFDQSLEALDKVTEKLSNDVAQDGDEYKRNFIKSIQDINTTIFSENAG
GRPQAEKTVLLLLTQGKHEDHSITKVASKLLNDPKFHVLAVGIGKKARNE
ELIGAAKYPNRILSVNTIRELFPGKPGYDIIYRLLENPSYDRFAVQNIPK
QLDECDFVADVGFLIDASNSIREDYLSELQFVKLVTASYGISKEGSHAGA
VIYSDFGRFSTASIKFTDHFSTPSFLKSVEKVEHFGFRTRIDLAFLVAQD
QLFTVKGGMRPGKQVKKIIYLITDGEQNPKRSGNRILDPVAASQKFYDDG
VIIFAIGVGPLVNKDELERITRDPSRVFLANHPNEL
Run BLAST on NCBI

transcript from alignment at sc0000061:413587..421547-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005919 ID=TCONS_00005919|Name=TCONS_00005919|organism=Clytia hemisphaerica|type=transcript|length=7961bp|location=Sequence derived from alignment at sc0000061:413587..421547- (Clytia hemisphaerica)
GCAGATTTTTGATAAAAATAAAACATAGATTGAAAATGACGAAGACAATT
GTGTTTACGCTACTTATGCTATTTGTTTTCCAAGGTAAGTTGTTTTTATG
TTCTAATGACGTATGCAATTTAGACCACAAAATAATATGGGGATCATATG
TCCAGATAGCATGTACCAAACTCTTCTCAGCTGAAAAGAAAATGTAAAGT
TCAACACACGGTAAGACTTTCTCAAAATATGATAGATGGCCCGTGTGCAG
CATGGTACAGGCTAATGTCGAGAGTGATTTACATCATTTTCAAAGTCTTT
TTTTCCCAGACCAGCTTACACTACAATATTGGCTGCCTCTAATATTCAGA
GTACAGTCTCCGTGGAAATGTGCGGTACGTGATTTCTAGTAATTGTAAAA
GTGGCTCTTACTCCGGAGGGGGTACGCAAAATGGTTGCCGGTATGTGAAA
GCCATAAGGGTCTCTTTTTCACACCCTCAAAAGTCTACAAAGGGGTACAA
AAACCATTAAAAAGAAAATTGAGTCTCTGTAAGGGTCCAAAATCAAGAAA
TTGAAAATTTCCTCTCTCAAAGGGTTGTGATTTTCCAAAAATTGGACAAA
ATTCGAGTGAAAATCTATGAAAATTTTGAGAAAAGTCCCTCTAAGGGTCC
TAAAAACGCCAATTTTTCCTCTCTATCTAAGGTTCGATTTTCGATTTTTG
GCTCGGACTTACCCGTCACCTCGCAAACCTAGTACCCCCCCGGATCTTAC
TTCAGTATTAACTGTGTTGCTTTTAAGAGGGTGACATGAACTGCAGGGTA
ATAAAGTATTTTGTCGTTTCTTCCGACTAATATAACAATACCACCTGTTC
GATAAGAAAGAAACCGCAACAGTTATTTGTTTTTCAAGGCATTACTCATA
AAGACTTTTTAGAGAAGAAAAATTTAAATGCGGTTTTCTGTATACAGCAG
CGGTATTAATTCTTTAAATTCTTGCTTAGTGGAAAACAGCGATGTTTACT
TTATTCAAATCATGCAATATTTCGACAAAAAATTCAGCTCCTGGAACTTA
AGACCCATAGTAAGTAATACCCTGTTCTAGTTTAAAGATGTAGGGAGTAC
CTACTCAATTTCCCTTAAAATCATTCTTTTAAATACATCTTTTCGATCGT
AGTCACGCAGTCAAGCGCGTGCCACTTAGTTATTTAATTATTCACCTAAA
CTCGATCAAATCCTTTTTTGACACACTTTTCTATAGTCTATAGGTGCGAA
AAAAAGACTGGGACGGTTTTGGTGGGATAAAGCCGAGAAAAAAATGCCCG
CACGGCAATATTGGCGGCTACGGTCGAAAAGGTGTATTATTCTTGTGCAC
TCCATCTCATATCCCTAAAATAATTTAAAGGTCGAGACAATTATTACAGC
ACTATCTTAGCCGGAAAAAAAGACAAAAACCATACTATTCCGTGCCGCAA
CATTGTAGCCACTTAACATTCTAGGTTGAGGACCTCTTCAGCCTGGAAGG
TCTTCGATTTTGCATCAGGAATCTCTCTATAGAAAGGTAAAAACAGCACT
GACTCATAATGCGGGAAGATTAATGAAAGAGAATCAACGGCATTTTGTTT
ACAAAGTACATTCACCACTTGAAAAAACTTTTAAGTACATTTTTGCAAGT
GTTTGTATTAAAGGGAAGGTGATAATAGGTTTGTTTGCAAGGAAAACGGT
TTTGCACCCGCGGGACAAGAATCGAAAATCGAAGAAAAAACGCTTTGCTG
ACCAGTTAAGTGACTTATCCCAAAATTGGAGAAATCAAACATAATTATTT
TTCACCGTTCAACATATAAATTTTCCCAAAAGCGTCGGAAATCGTGACTC
AAGATTTTCGATTTTTGTGGTTTTGGGACCTTTTCAGTGGTTTAGTTTTG
TAACCAAAAGAGATTCCCCAGGCTCGAAAATTTGTCCATACCGCTGTACC
CAATTAGCCTAAATGAAAAATCATAAAATATTCATTTGGGAAATCTTACT
ATCATAATAACGAATACACTTCAAACCCTTTTTCAGTCTGGTGAAGCCAT
TGACATCTAATAAGCCCAATAGATTGAAAACCGTTGAAACTGCTGAGAAC
TAAAGGAATTATCTGATTGAAGTAGGGAAGGAACAGAAATAAATTAATCA
CGAGATTCAAGATAAAATTTAAGGGTGTAAAATATACGCCCTGGTGTTAA
CCGAAGTAGGAAACAATGAAAAATTAAAGAATATTGAGAATATTCTTCAA
GGTTCATTTGCGGGGAAGAGAGTGGAATTAACTTATTTTGTCGAGACATG
AAAATCAGAGACGGGAAAGCACTCACAAACGGAAATCTAAAAGATATCTA
AACAGGAAAAAGCCCATCAAGAACTATATGAATTTCTTCATAATCTAACA
TTCTGTGTCAAGACATTATAATCTAACAGTTCTAAAATGTTCGCCCTAGC
TATAACCAATGTGCAAATTTTATCAAGGCCCAAAACCTAAGGATATTTTT
CACACATGAAAGTAAGTCCGAAAAATCTTGCATCAATCCTTGGATCCAGG
AGGATTTACTCATTCAGATGCTACACATTTTTTCATAAGAACATCTAAGT
TTTTTTCAAATTAGACTAAGAGTCCATAAAGGCAGTCCGAGGCCACTTGC
GCACGCTGCGATCTCACTTTTTGGCTTCAATCCTTTTTGCTCGGAAAAAA
GATTACGTCATAAAAATAAAGCGCACTTTCGAAGAAAAAGTTGAACACAC
TTCACACACTTTTTTTTCAACCGTTACGTCAGATCGCGCCAATGAAGTTG
CTTTATTTTTCTTTCGACCAATAGCGTGGAAGCTTTCCTCGAAAAAGTGC
CATTCGAAGCGCGCGATAGTGAAGACCAGCCTTAGTGTACCATTAAAAAT
CTTGTATAACCTTGACTCGGTAGTTAGGCGGTACATGATCGAATCTAAAC
TTTCACTTTTATATTATAGTAATCGAGGCATCCTCTGACGATTGTCCAGA
TGGCATTCGAGATATCGCTATTGTCTTTGAGACACCACGTGCTCGCGCTA
TGTCTGAAGTCGAGGTAAAAGTTCTACCAATTTTCAAATATCACTGTCTC
GTGCGTCTTGTAAAACTCCCCTTGATGTATTGACACATGTTCAATGCATT
ATACAGGGGCGGGGGATTAGGGAACTCAAGGTTAGCGTCCTTTCGTAGAT
GCAGTCATTACGTACCCTACGTTTTCGTGCGGCAATCGTCCGTACGGGAA
CGTCCTGCGCCGTACCTTTCACGGCCCGTTATTTCAGGCTTTAGAAATTG
TACTGTAATGGTNCTGCGCCGTACCTTTCACGGCCCGTTATTTCAGGCTT
TAGAAAGTGTACTGTAATGGTGGAAATGTGAGAAAGTCCAAAAATAAAAA
ATTTTTGCCTTAAAATGGACAAAAGCTTTCGATAAGATGAATAGCAAGGG
TTGGTTTTCACCAAAATTTACTAAAATTCTAAAAGTTGTCTCTACACTTT
ACAGGTCAAATTTTAAGACCCTAGTTTTTGTCCACACATACGTTAAATTT
CAGATATAGTATTCACACCTTTCTGGGTACGTTCTAAGGATGAAAGAGTA
CTATTCAAGGAATACTTTGTAGAGAGAGAAATGGCATAGGCAGTTCAAGA
CATTGTCAAACTTATTAGGGGAAGAGATTGTAATTGCAATTTCATTGTCA
ATTGATGAGCGTTGCACTCCTTCGCATGTTTCCAACGTACTTGCTCTATT
GCCTTAAATCTGCCAGTGTGAAATGGTGCTTGAACGTACAATGAAAAAAC
TTACAAACCTTTCTACATATTTCTTAACATGCAGGATTTGAAACGTTTAT
ACGTATCCCTGCACAAGAATGATACAGCCTCACTCAAATGCATTCACTAT
TCTCTGGTGGTGGCTGATGACATCATTGATATCATACAATCACTTGATTG
TCAATCAAAAAGATGTTTTGACCAATCATTGGAAGCCCTTGATAAAGTAA
CAGAGAAATTATCCAATGACGTTGCACAAGAGTAAGTTCCAACTATCAGT
CTAGTCCTATGAAAAATCCTGCACTATAACACGCATGCGAAATTTGTCGT
TCTTTTAAACCACATGCAGTTAATTCCCGTGATAAAGGAAGAGGAATGAA
TCGCTAGGGGTGTTACAGTCACTTTTGGTCGGGGCAAAATATGTCGTTTT
TTATGAAATTTGTCTTTCTTTTTGTCTATTTTTAGTAATGCAGAATTCTT
TAGATAAACCCCCCTCTAAGTAAACCTTAACTGGTTTTATTCATGTATTT
CTAGGTCTTGAAAGCACTTATTTGTATTACCTCCCAATACTAGGTCATAG
CTCAGAAGCATGTAAATTGTAACTCATTGGTCACACTCGAGTAATTCTCA
GCCAGTATTTGCAAAGCATAGTGAAAGAATTTCTTTCGCTAGACGTCAAG
ATGACGTTATTTTGACGTTCATCTTGCCTTTACTAGACCCAAGGCTTTTT
TTCTACGCCGTCTATTTGTTCAAATGTTTGGAGCACAGGTTTCCAGGGCA
AGAAACGGAATGAAAAATCCAGGTTTTTTTGTGAGGTACTCGCTAACACA
AATCAGACGTCATGGATGTTAAATGGATGTTGTTTTAATCTTATCATTTA
TTTTATTTCAGTGGAGACGAGTACAAGAGGAACTTCATCAAATCCATCCA
AGACATTAACACTACCATATTCTCTGAGAACGCTGGTGGTCGACCACAAG
CAGAAAAGACGGTACTGTTATTGCTGACTCAGGGAAAACATGAAGATCAT
TCTATCACAAAAGTAGCTTCTAAACTTCTTAATGACCCAAAGTATGTATT
ACTCCTTTATCAATCCTGATATAAAATGTTGTATAAAACTTAGACTAGAG
TCTATACCTCTGACTGAACTTTGCTTTTTGATGATTTTGATGGCGCTGAG
TCCAGTGAAGTGGACTAGAGGATTGCCAAATTACACCGGGCCACTTATCA
GCGCCATCCAGTCTATCAAAAAACTAAGTGGACCCCGGGCTATATAGGCC
TGAAACTGAAATCGAATCTCCCGTTTACACAATGAATTTGGTGATTTGCA
GAATTTTTATCACATTATTCGCACAATTTATCTATTTTATCGTGGAATTC
TATTTTGGTAACGGAAAATTTGAGCCTATGATGAATAACACTATAATTTT
ACAAATTTGGAGATTTATAGTTCGCACATCAAATACTCTGGACATTGTAA
TAGTAGACCCCCCTGTTTTCTCACTTTTCTCAATTTCCCACTGGGAAATT
TACTTTGATTTCATCCCCATTCGAAATTCAATGTTTAAAAATGACACTCC
AAAACCATCCCCACTGGAGTTTTTGAGTTTAGATCAATAGAATTTCTATC
CCTATTGGAATTTCAATAGGAATTTTTATCCCCGCTGAGGAAAGAATTCC
ACCGGGCTGTGAGACAGGAGTGTTAGTAGCCCTTCTCAAGTTTGATAAGA
AACGAAAATATGTCCAACAAAGCAATCTGCAAATTATTTTAGATTCCACG
TCTTAGCTGTTGGAATTGGTAAAAAAGCAAGAAACGAAGAACTAATTGGA
GCTGCAAAATATCCAAATAGAATTTTATCGGTTAACACAATCCGAGAATT
ATTTCCCGGTAAACCCGGTTATGACATAATTTACAGATTACTTGAAAATC
CTTCATACGGTATGTAGACAAGCTATTTTATGTTTTTGACAAATTATTTT
AAGATCCCAGCCCCACGGGAAAATTTAACAAAAAAAGTCCCCGGTGGGAA
AATACCCTGGAATTTCAGCCCCACTAGGAATTTGATTTTGATTTCATTCC
CATTTGAGATCCAATGTTTAAAAATTTCACTCCAAAATTATTCCCACTAG
ATTTTTTAACTTTAGAAAAATAAAATTTCTATCCCCATTGAGATCTCAAT
AGGAATTTTTATCCCCACTGAGGAAAAATTTCCACCGGGGCTGTGAGACA
TGTTTTTATCAATAATTTCAATCTTTCAGCCTACAAGGCTAATCTGTCTT
CCTTCCCTTAAGTGCTGTATACTACCTAAATTATTCTAAACGTAGAAAAC
TTCACAGACCAGGAACTTTTGCGACATTTAAAATCATTTAGAACGACCTT
TTGCAAAATTAAGTGTCCCATAATTTACTTTTGGAAGAGACTTAATGGAT
ATTCATTCAACGATTTTTCCGTCTATTGACTATTTCAAATTCATCATTTT
CACAGATCGATTCGCCGTTCAAAACATCCCAAAGCAACTTGATGAATGTG
ATTTCGTTGCAGACGTTGGATTTTTGATTGATGCTTCGAATAGTATAAGG
GAAGACTATTTGTCCGAATTACAGTTCGTCAAACTCGTAACTGCAAGGTG
GGTTACATTGAGTTTGAAGCACACAACGTTGTTTCAACGTTTATTTAACG
TTCAAAACGTCCATATAACGTTAGATGAACGTTGAAACAACGTTGTGTGC
CAGCTGGGCAGAGAAAAAGTGAAGTCTTAAGTTTTCCCGCCTTTAGAAAT
TTTAACACGCCGATCACATGTTTGGATAGGAAATAAGTGGCTTCATTTCC
CATCCAGGAGAAACGCCTTACATAAATAAAATCAAGAATTGATATCAGAG
TATATATTTCCATCAATCATAAGTCTTAACGCAGATTGGACTTTCTGAAC
GTTAGATAGACGTTGATTTTACATACTTTATCAACTGGGCCAAACTTTTC
ACCCTCTCTTTCTTAGTTATGGTATCTCCAAAGAAGGGTCACACGCCGGA
GCAGTCATCTACAGTGATTTTGGGCGTTTCAGCACAGCATCTATCAAATT
CACTGATCACTTCTCCACGCCGAGTTTCTTGAAATCAGTGGAAAAAGTGG
AGCATTTTGGATTCAGGACGCGTATTGATTTGGCTTTCTTAGTAGCCCAA
GATCAATTATTCACTGTCAAAGGAGGTAAGATTTTAGACTGGCACGCCAG
TCGGGCTGGAACGGTATCACGCGGGAAAAGTGGGCGTAGGAGTTAGGTAA
GCGTAGGAAAAAAATTTGTCGGCGGCAAGGGCTGAAAGCACTCCTGCGTT
CTCACAACCTCCAAAATTAAGCCGTGGCAGAATGTTCTAGTCTGTTAATC
AGCAGCCTCTCACCAACTTTTGCTCGCTCTCCTACGCAGCTCCTATTCTA
GCAAACGCCCGCCGCCTTTTATGTTCCCGCCCTCTGACATGATTAATTAA
TAGACTAGTTTGCTAGTTTAGTAAGATTTGAAAGTAGGATGCCAGAAGAT
ATCAAAGCAGAAGTGATATCATCCCAAGGGTGCGTTAATGCATGTTAATG
CACGATTACACGTTTTTTTTTATAAGAAAAACTGTGTAAGAACTCATAAG
GCTTTGATTACCAAGATATTAAGAAATGAAGTTTTGCGGAATCTAAACAC
CCAATTTCTTAGGAGATTGTACAAAAATACTCACGAAATAGTGAAGATGA
AAACATTTTAGGAACATATGTAAGCTTGAGACTCAAAAAGTTAGGGAAGA
TTCAAAACATTCGAAAAACCTGGACGTTCTTACAAAAATACGTACATCTT
CTCAACACGAGGCTTAAACTAACGCACTCACAAATAAAAATATTTGGCGT
CATTCCAATCCTAATAAATTTGAGCCCAATCCTCTTGTAGGGCTATTGTT
GATAGCTGTATTATTCCTCCTAGGTATGAGACCAGGTAAGCAAGTCAAGA
AGATTATCTACCTCATCACAGACGGCGAACAAAATCCAAAGAGATCTGGT
AACAGAATCCTCGATCCTGTCGCAGCATCGCAAAAGTTTTATGACGACGG
TGTTATCATTTTTGCGATCGGGGTCGGTCCACTTGTTAATAAAGATGAGT
TAGAGAGAATCACAAGAGATCCGTCGCGAGTTTTCTTGGCTAACCATCCA
AACGAATTGGC

Coding sequence (CDS) from alignment at sc0000061:413587..421547-

>TCONS_00005919 ID=TCONS_00005919|Name=TCONS_00005919|organism=Clytia hemisphaerica|type=CDS|length=1308bp|location=Sequence derived from alignment at sc0000061:413587..421547- (Clytia hemisphaerica)
AGATTTTTGATAAAAATAAAACATAGATTGAAAATGACGAAGACAATTGT
GTTTACGCTACTTATGCTATTTGTTTTCCAAGTAATCGAGGCATCCTCTG
ACGATTGTCCAGATGGCATTCGAGATATCGCTATTGTCTTTGAGACACCA
CGTGCTCGCGCTATGTCTGAAGTCGAGGATTTGAAACGTTTATACGTATC
CCTGCACAAGAATGATACAGCCTCACTCAAATGCATTCACTATTCTCTGG
TGGTGGCTGATGACATCATTGATATCATACAATCACTTGATTGTCAATCA
AAAAGATGTTTTGACCAATCATTGGAAGCCCTTGATAAAGTAACAGAGAA
ATTATCCAATGACGTTGCACAAGATGGAGACGAGTACAAGAGGAACTTCA
TCAAATCCATCCAAGACATTAACACTACCATATTCTCTGAGAACGCTGGT
GGTCGACCACAAGCAGAAAAGACGGTACTGTTATTGCTGACTCAGGGAAA
ACATGAAGATCATTCTATCACAAAAGTAGCTTCTAAACTTCTTAATGACC
CAAAATTCCACGTCTTAGCTGTTGGAATTGGTAAAAAAGCAAGAAACGAA
GAACTAATTGGAGCTGCAAAATATCCAAATAGAATTTTATCGGTTAACAC
AATCCGAGAATTATTTCCCGGTAAACCCGGTTATGACATAATTTACAGAT
TACTTGAAAATCCTTCATACGATCGATTCGCCGTTCAAAACATCCCAAAG
CAACTTGATGAATGTGATTTCGTTGCAGACGTTGGATTTTTGATTGATGC
TTCGAATAGTATAAGGGAAGACTATTTGTCCGAATTACAGTTCGTCAAAC
TCGTAACTGCAAGTTATGGTATCTCCAAAGAAGGGTCACACGCCGGAGCA
GTCATCTACAGTGATTTTGGGCGTTTCAGCACAGCATCTATCAAATTCAC
TGATCACTTCTCCACGCCGAGTTTCTTGAAATCAGTGGAAAAAGTGGAGC
ATTTTGGATTCAGGACGCGTATTGATTTGGCTTTCTTAGTAGCCCAAGAT
CAATTATTCACTGTCAAAGGAGGTATGAGACCAGGTAAGCAAGTCAAGAA
GATTATCTACCTCATCACAGACGGCGAACAAAATCCAAAGAGATCTGGTA
ACAGAATCCTCGATCCTGTCGCAGCATCGCAAAAGTTTTATGACGACGGT
GTTATCATTTTTGCGATCGGGGTCGGTCCACTTGTTAATAAAGATGAGTT
AGAGAGAATCACAAGAGATCCGTCGCGAGTTTTCTTGGCTAACCATCCAA
ACGAATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003370XLOC_003370Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005919-exon-sc0000061-1575043694:421464..421547TCONS_00005919-exon-sc0000061-1575043694:421464..421547Clytia hemisphaericaexon
TCONS_00005919-exon-sc0000061-1575043694:418484..418578TCONS_00005919-exon-sc0000061-1575043694:418484..418578Clytia hemisphaericaexon
TCONS_00005919-exon-sc0000061-1575043694:417517..417713TCONS_00005919-exon-sc0000061-1575043694:417517..417713Clytia hemisphaericaexon
TCONS_00005919-exon-sc0000061-1575043694:416707..416886TCONS_00005919-exon-sc0000061-1575043694:416707..416886Clytia hemisphaericaexon
TCONS_00005919-exon-sc0000061-1575043694:415839..416005TCONS_00005919-exon-sc0000061-1575043694:415839..416005Clytia hemisphaericaexon
TCONS_00005919-exon-sc0000061-1575043694:415151..415292TCONS_00005919-exon-sc0000061-1575043694:415151..415292Clytia hemisphaericaexon
TCONS_00005919-exon-sc0000061-1575043694:414573..414781TCONS_00005919-exon-sc0000061-1575043694:414573..414781Clytia hemisphaericaexon
TCONS_00005919-exon-sc0000061-1575043694:413587..413824TCONS_00005919-exon-sc0000061-1575043694:413587..413824Clytia hemisphaericaexon
TCONS_00005919-exon-sc0000061-1510915933:421464..421547TCONS_00005919-exon-sc0000061-1510915933:421464..421547Clytia hemisphaericaexon
TCONS_00005919-exon-sc0000061-1510915933:418484..418578TCONS_00005919-exon-sc0000061-1510915933:418484..418578Clytia hemisphaericaexon
TCONS_00005919-exon-sc0000061-1510915933:417517..417713TCONS_00005919-exon-sc0000061-1510915933:417517..417713Clytia hemisphaericaexon
TCONS_00005919-exon-sc0000061-1510915933:416707..416886TCONS_00005919-exon-sc0000061-1510915933:416707..416886Clytia hemisphaericaexon
TCONS_00005919-exon-sc0000061-1510915933:415839..416005TCONS_00005919-exon-sc0000061-1510915933:415839..416005Clytia hemisphaericaexon
TCONS_00005919-exon-sc0000061-1510915933:415151..415292TCONS_00005919-exon-sc0000061-1510915933:415151..415292Clytia hemisphaericaexon
TCONS_00005919-exon-sc0000061-1510915933:414573..414781TCONS_00005919-exon-sc0000061-1510915933:414573..414781Clytia hemisphaericaexon
TCONS_00005919-exon-sc0000061-1510915933:413587..413824TCONS_00005919-exon-sc0000061-1510915933:413587..413824Clytia hemisphaericaexon
TCONS_00005919-exon-sc0000061-1491911889:421464..421547TCONS_00005919-exon-sc0000061-1491911889:421464..421547Clytia hemisphaericaexon
TCONS_00005919-exon-sc0000061-1491911889:418484..418578TCONS_00005919-exon-sc0000061-1491911889:418484..418578Clytia hemisphaericaexon
TCONS_00005919-exon-sc0000061-1491911889:417517..417713TCONS_00005919-exon-sc0000061-1491911889:417517..417713Clytia hemisphaericaexon
TCONS_00005919-exon-sc0000061-1491911889:416707..416886TCONS_00005919-exon-sc0000061-1491911889:416707..416886Clytia hemisphaericaexon
TCONS_00005919-exon-sc0000061-1491911889:415839..416005TCONS_00005919-exon-sc0000061-1491911889:415839..416005Clytia hemisphaericaexon
TCONS_00005919-exon-sc0000061-1491911889:415151..415292TCONS_00005919-exon-sc0000061-1491911889:415151..415292Clytia hemisphaericaexon
TCONS_00005919-exon-sc0000061-1491911889:414573..414781TCONS_00005919-exon-sc0000061-1491911889:414573..414781Clytia hemisphaericaexon
TCONS_00005919-exon-sc0000061-1491911889:413587..413824TCONS_00005919-exon-sc0000061-1491911889:413587..413824Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005919-proteinTCONS_00005919-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000061supercontigsc0000061:413587..421547 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0313657	0	0	0.086752	0.102829	0.206764	0.0774281	0.40657	0.0335735	0.977617	0.171372	28.7292	25.5479	25.1316	43.6695	3.01825	4.28155	3.89787	5.3669	0.279889	0.364053	11.1745	14.2162	1.86483	1.66432	0	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005919 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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