TCONS_00006072 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006072
Unique NameTCONS_00006072
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1573

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006072 ID=TCONS_00006072|Name=TCONS_00006072|organism=Clytia hemisphaerica|type=transcript|length=1573bp
aaaaatctttagctcgtttatattttcaaattttatatatttaaaaatat
ttttttaattaaatagaTTGATGTCAGCTGGTTAAAATGAGGTTGACATA
CACATTCCTTTTGTTGGCGTGCCTTGGCTGCATGACTTGTAGTCACGGCA
AGACAATCGCCAATAAACGAAAACATATCCaCCACAAACCAGAAGCCACC
AAAAATGCAGAAGCAGCGAAAAAACAAGATATGTCATTCAATGATGAGAT
GCCAGGACAAGAAATGAACGAGGGACCAGTTGGTAAAGTCCAAAATGCTG
CTGGCGTCGAAGGTTTGGGCGGTGAGATGAATGGTATCCCAACCGGTATG
GGCGCAGGGGCGGAACCATTGGGCgcatttgaaaatgaagacacACCACC
TGGAACAGAAACACAACCTCAAAGTTTGGGCGAAGACCAACCCAATGGAC
TTTCGGAATCAAACCTTGGTGAACAAGGAGGAGCTGGAGAAATGACGAAC
GAagcttcagtgaaaatgaaagcacCCGCAATTTCTATGTCTCACTCATT
AGACGATCTCGATAATTCAGTCAATATCCAAGGCGATGGAGAAATCGGAA
AATATGTTCGTAACTCCCGACAAGGAGGTATGGGAACAGGTAGCGAGAGT
ATGATTGGTTTGGAAGCGAAAGACCCTCCTTTCACAGGACATGGCCCTGA
GGATGAGGAAGACGAGACTCCATCAAGAAGACATCTAGTTAAACAAAAGC
CCAAACGCAAGAAGAATTCCtggaaaaaaccttttaaacAATTACAAAAG
AAACAACAATAAGACACGTTTTACACCAAGGGTTTTTATAACCTCAACAG
TAAACTTATATTCAATTTTAGCTGACTAATTTCGCTTGTATAATGCAATA
GatctttaactttttgttaattttttgtctgaAAGATAACACATTTCTTC
CTATGGAGGAACTATTACACACCGTAAATTTATATAATGTCGAAAACTCC
TACCAGTTCCGTCACTCTTCCTTGGACTTGGAGAGTTTATTTTTTGATTC
TGCTTCACACATTATCTTCATTCCTTCTCAAAGTGATACTTCGGCAAGTT
GAAATGTTAGAAGCTGTGTTTCGATCTTTTGTTCCACCTTTAAAAAGCCT
CCAGACTTTCTTGTTGCATAGATACAAAATGCAAACGAAAATTCCCTTTA
AGCTTCTCACCAAGACAAacagaaatgaaaaaatcaaattcactgTCATC
AATTCTTTACCTGGTATTTGTACATAGCCAATGATATCAATCAAACCCAA
CCCAATAATCAACTTTAAAGCAATTCTCACTAAGTCAGCATTGGCTTGAT
CGGACTGtaaagtttttcttgtttttttcttaGCCAAGTGTATTTTGAGC
AGAGTTTTGGCTAAGGCCAGAATGGATATCAAATGCATGACAACCATTGG
AGTGATAACAGACCACACCCTTGTGGGGGTATGTGTGACCCAGCACATTT
TATCATAACCAACGTTGACATTGCCAGCCTCGTTCAAAATGACTGCAGGG
AGTACGAAAAACAAAGGTAAAAT
Run BLAST on NCBI

protein sequence of TCONS_00006072-protein

>TCONS_00006072-protein ID=TCONS_00006072-protein|Name=TCONS_00006072-protein|organism=Clytia hemisphaerica|type=polypeptide|length=241bp
MRLTYTFLLLACLGCMTCSHGKTIANKRKHIHHKPEATKNAEAAKKQDMS
FNDEMPGQEMNEGPVGKVQNAAGVEGLGGEMNGIPTGMGAGAEPLGAFEN
EDTPPGTETQPQSLGEDQPNGLSESNLGEQGGAGEMTNEASVKMKAPAIS
MSHSLDDLDNSVNIQGDGEIGKYVRNSRQGGMGTGSESMIGLEAKDPPFT
GHGPEDEEDETPSRRHLVKQKPKRKKNSWKKPFKQLQKKQQ
Run BLAST on NCBI

transcript from alignment at sc0000062:430112..437041-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006072 ID=TCONS_00006072|Name=TCONS_00006072|organism=Clytia hemisphaerica|type=transcript|length=6930bp|location=Sequence derived from alignment at sc0000062:430112..437041- (Clytia hemisphaerica)
AAAAATCTTTAGCTCGTTTATATTTTCAAATTTTATATATTTAAAAATAT
TTTTTTAATTAAATAGATTGATGTCAGCTGGTTAAAAGTAAGTGATAATG
TGTTTGTAATTTTTGTACGCTCTAGCTTAGACCACCGACTTTCTGTCCTG
TCTATTCTAATTGTTAGAGTAGGTACAGAGTTGGCAATTAAAATCTTAAC
TTGAAAAGGACTGAAAGAAGTCAATACATTGGTTTTAGACAGCCAACTTT
CTGCCCATCTTTTTAAATTCACAATTAGAACAGGCAGGGTGAAAAGTGGG
CCGTTTAAACCAGAGCTAAATCTTGTAAGATAAATTACTTCAATCTATTG
ATTTTGATGATTTCGATACTGCCTTGGCTTCTCTTGTTACTGTTTTATTA
TCACATTTTTGATTTTGTTCATAATTTTACATTCTTCCATTTTTCCTTAT
TTCAGTGAGGTTGACATACACATTCCTTTTGTTGGCGTGCCTTGGCTGCA
TGACTTGTAGTAAGTTCTAAGTTCGCTTTTTCATGACTTTTTTAAGGGTG
TGTTTTTACGTAACTTAACAAAAGATACAACGACTATAAAGCTTCTGATG
CAAGTTTTACTGGGTGCTTCTAAGCAAAAATACCTTTGATATTTTATCAA
GTCATCTTGACATGGTCTTCTCATTTCAAGAAGGCTTACTCTCGATTCTT
TAGACCCTTTACAGACGAGACATCAAATTACTGACAAAACAAAACAACAA
CATTATTACAAACGAACTGTGAACTCTCCACTAACCGTCGACTCTGCTGA
AAATATACCTCAAACACCGGAAATGAATGTGGAACTACCCGATACTGCGG
ATACACCGGACTCCAGAACAAACATTCCGCAAAGTAAGATTCAGACTTTA
TTCCTGAAACAGAAAAATGTGAACAATAGACTGCAAACACATGTAACTGA
GAACAATAATAAACGAACAGAAATCTTCAAAAGAATGCGAACACCCGATA
CCGTAGATACACCGACCATGGACGTTGATACCCCGAACACACCGGACACT
CCCGAATTCGACGTAAATGTAAACTCGACAAAGAATACTCCAGACAGTAC
CGGATTTCAATTTTCCGGTGATGATGACCCAAGTTATACGGAAGTTGATA
ACGGAAAATTAAGACCAATCCATTTTATAGCGAACCCGTTTTCTAACGTA
ACTGAAACGACAGGAGCGGTTTCCGTGCGCTGGAAACCGTACAATAAGAA
CACGTCGCGTATCACTATTCATGGTGCACGGATGCACGATGAAATTGAAG
CCAAAACACAAGAAGAAGATGCCGAGAATAAAAATATGATAGGAGAAGAA
ACTCAAATCTCCCTTGATAAAGAAAATGCTAAACTTTTCAAAAACTCTAC
TTTTGATAATACAATGTTGGATTATTTTTTCAACCAATATAACAAAAAGT
CCTTTTTACCTAAGCTTCTCTCAAAGAACAAATCTACTACTTCTAAATCT
ACGCTATTTTTGAATATGAAGTTTTAATATTTCTAACAAAATATCAATAT
ATCTTTTTGGTAAGCTTTTTAAATTTTTAAATTTTATCGGACATAAGCTC
TCTGCTACGTCGACCAGTTATAGATACTTCGGCCTTGATTTACTACAGTA
TTAACAAGTTTACGTAACATCTTTACTTTAACATTGATTTAATATTTAGG
AGTTCACGTAACACATACAAAGATACGTTAAAATACCTTAAAATGCGCGT
TATTCAAATCTTTAAAATCATTTTGATCCCATTATTAATTAGACTAGCAA
ACTAGTCTGTTAATTAATCATGTCAGAGGGTGGGAACATAAAGGCGGCGG
GCGTTTGCTAGAATAGGAGCTGCGTAGGAGAGCGAACAAAAGTTGGTGAG
AGGCTGCTGATTAAGCTTTCAGCCCTTGCCGCCGACAAAATTTCTTCTTA
CGCTTACCTAACTCCTACGCTCACTTTTCCCACGTGATACCGTTCCAGCC
CGACTGGCGTGCCAGTCTAATTATTAATATGCTGGTCCACTCTCTTTTTT
CAGGTCACGGCAAGACAATCGCCAATAAACGAAAACATATCCGTAAGTTA
GTACCCATTCCCAATTTTTCACCATTTGAAAACATTTTGGTATTTCACAA
CCATTCAGGATATCAATTTTTCTGATTCTTTAAAAAAATAAAAGTAAATT
TTCCCACTATTTCACTTTATCTTGAGTTATAAAGCAAAAAAGTTTTGTTT
TTTACCAAAGCTGAGGCTACAGGCTGGTGTTTTTAGGCGATTTGAACTGA
TTTTTTTGAAGCCACTTTTGTAATTTTTTAAGCGACATTTTTCTAGCGTT
ATAGTGTACTTACTGATAGCAGAAAAATTTGACGTGCTACATTTTACAAT
TTTTCATGCGTTTTTACAACGCAATGTGAATGGCATTGCAGCCTGTAAAA
TCGTATAAGTGTAGTCTTATTCTTATAGTATCCTTATCATTTTATTTTGT
AGACCACAAACCAGAAGCCACCAAAAATGCAGAAGCAGCGAAAAAACAAG
GTACACTAAATTCTTATGTTGTTAATGTTAATATACTCAACCTCTTTATA
ATGAATTGCTTTAAGATTTATATCTGTTGGTGCTTTTAAGACTTATCTGT
TCTTCATCTGTTGGGAGTATTTTTTAATTTCAAGAAATATTCGATTCCCA
ACTATCTTTCCTTTGTATCCATGAATTTCTATTACTGTAAGCTTCCCTAT
TCTTAACAGTCAAGATTACGTCATTCACAAACAGGATGAACTGTTTTAGG
GAACATAAGCTTCCATCCAAATTCTTTCCAAACACTGTTTCAAATAGGAT
AAATGTCTTGTGACTTATGTATATCATGATATAATTTTTCTTGTGGTAAT
GATTATCTGTTTATTACTTTCTCTAGATATGTCATTCAATGATGAGATGC
CAGGACAAGAAATGAACGAGGGACCAGTTGGTGAGTTAGTGAAGATTATA
TATAACAATGATGCTGGCTCGTTTTGGACCTTCTATTACATTACTACACT
CATTGAGTTTAAAGGGGTAGAAAGTCTTTCACAAGCGAGAAAAAGTGAAG
TCTTAAGATCAACGCTGCATTTAGAATGAGGGATTGAATCTAGTGCTTTT
TTGTTTTCATTCAAGCACGCATTTTTTGAAATTTGGCGATAAATCCGGCA
TTTCTGTCATCCAAGAGTTTCGCATCCATTGCGGCTTAAAACTCAATTAC
GCCTGAGAATGTTTTATTAAGGTTGACATGTTTTGGACATGTTTTTCCAT
TCTTAATTTAAGTTATCATATAGATTTTTGATTAATTACTTTCTAGGTAA
AGTCCAAAATGCTGCTGGCGTCGAAGGTTTGGGCGGTGAGATGAATGGTA
TCCCAACCGGTATGGGCGCAGGGGCGGAACCATTGGGCGCATTTGAAAAT
GAAGACACACCACCTGGAACAGAAACACAACCTCAAAGTTTGGGCGAAGA
CCAACGTACGTTATTTTATTTAACCTTGATAAGATATACTTTCTAACTCT
ATGGCATGGGGAACAGGGGGGTCGATAGTAAAATCTCAGACATAATGACG
TTTACTACGGTGGTGGTGTGACGAGAAATAGAAAAAAACTTTTACTACCC
AGGGTAGTTAAATACTAAAATGGGTGGTATCTATGGGTTAAATGTTGAAA
AAATTTACTACCTGGGTAGTTAAAACTGGTAAAATTAGCAAATTTTAGCT
ATTTTTGTAATTCTTTTAATTTTTTGGATGGCTTTACTGAAAAAATCTTC
TGTTGGAAAGTTGTTTGCTGCAAACCAAAAATTCTCGAAATTTTTTGTCA
ATATAAAAAAGACTTTAATTCTATGGGCAAAACATTAATTTTTGCATTAA
GTGAAAAATGTGTCACAGAATCATTTTTTAGCTTTTTTTGTAAAATCAAG
CCGAAAAGCAACCGAAAAATAGGTGGTCTCCATGACAAATTGTCCCGAAA
ACTTTTACTACCAGGGTAGTAAAATACCTCTTCCAAGAGTCTGGGTGGTG
GTATGTAAAAATTCATAAAAATCCTTTTACTACTCATATATGTCTGAGAT
TTTACTATCGACCACCCCCCCTGTGAGGGATATTATTGAAATTGAAAAGT
CAAAACAAAGAAAAGCCAAGGTAGAGTTTAAAATTTATAACAGAGTGTGT
TTCTTTGAGCCATAACCTTATAAGGAAATGAATTTTTGCCCCCCCCCCCC
TACGCCTCTTAAGATCCACCATTTCAATAATTCACGGTAAAGAGATGAAA
TAAAAATAGATTTTCACCTTCAATTCGCCCGATAGTCACTATAGTCATTT
GTAGAATTATCCTTATTGTGAATCACACTCTCATTTTATATTCAGCCAAT
GGACTTTCGGAATCAAACCTTGGTGAACAAGGAGGAGCTGGAGAAATGAC
GAACGAAGCTTCAGTGAAAATGAAAGCACCCGCAATTTCTATGTCTCACT
CATTAGACGATCTCGATAATTCAGTCAATATCCAAGGCGATGGAGAAATC
GGTGAGTACTTGCTGCCATTGACTTTTGATCTGTACAAACCAACATACCC
TCTTATTGGGATGATGAAATGATCAAGGGAAAAGCTTTATAAGATTACAA
GCAAGTGGAATAATTTTCTGTTTTGAACACTATAAATTTAAACAATGTTC
ACTAGTTTCCAAACTTGTTAAGACCTAGGTAATCTTGATATCCAGGCTGT
ATACTTTTTTTTACTTTTTTTAATGTTTCTAGTTTACCGCCTCGTCTTCC
TTAAAGCAAGCTATATTCCAATCAGAAGGTTATGCATAAATTAAAAATCA
GCCTACACTGTGTTCGCCAGCATCTAGGAAACATTTAAGTAAGAAAATAA
ACTACAGCTTTGATAACCAGGCTAGGATCTCAGGAATAAAATCTATTTAC
TCTGAATATACGAATTAATATTTCCTTTCTTTCCCTTTAGGAAAATATGT
TCGTAACTCCCGACAAGGAGGTATGGGAACAGGTAGCGAGAGTATGATTG
GTTTGGAAGCGAAAGACCCTCCTTTCACAGGACATGGCCCTGAGGATGGT
GAGTAAGTAACCTCTCTTTGTTTTTGTTTATCATAGTTTGGTAAATCAAT
TTTGAACGTCAACATCGATGGCAAAATTGCTTAAATTCCTTATTTTGTCC
ACATGACACCGAAATACCGTCATTTTTTCTTCAAACGCCGAACCGCCGAC
AGAAGAAAGGGCCAATACCGTCACATCGTAAAACCTGTACAAAGTCAATG
TCCCCTTCATAAGCTCTTTTTATACCCTTTTGATAAACCCGCTGGCAGCT
AAATTAAGCAACTAGAAGTTCGAATTTAATATTTTTGCAGATGCTGAGCC
TGACCTTTCATGTCAAAAAAGTCTCGAAAACACTGAAAACACTTTGTCCG
AAACACTTTTTCTGAACCTTTCATGCTTTTTTGGGGTGTTGTTGGCAAAA
ATCATTTCCCAGAAACACCTTACCTCTCGAGGTGGTGTGTTTTCAGCATT
TCCTGTGTTCCTGGGATTTTCATAAATCAACTCTCAATTTTCTCCATAAA
ATCCAAGCCAAANTCTCGAGGTGGTGTGTTTTCAGCATTTCCTGTGTTCC
TGGGATTTTCCTAAATCAACTCTCAATTTTCTCTATAAAATCCAAGCCAA
AATGCATTACCTGAAACACCGGCAAGTTTCTGAACCATTCAGTGTTTCTC
TGGTGTTCAAGGTGTTTTTCAAGACGATTTTGAAGCTCTTGCCGTGTCCT
TTCGGGACCAATCAGATAAAAATCGGGTTTAAAATCGGGTTAGAAATCGG
GAAAAAATCGGGGAAAATAGCCAGTTGGGACTTTTTTTAACAGTCGGCTT
CAACAGGACATTCGGTGTTTCTAAAAACTTTTAAGACTGAACCATTCGTG
TTCAAAAGTGTTTTCTGCAAACCGGGTAAGCAGTGTTTTTTTAAAGACAT
GAAAGGTTCAGGCTCGCTATAATATAATATTTTCTAAATTTCTTTCAATA
TTTCCTTCTCAGAGGAAGACGAGACTCCATCAAGAAGACATCTAGTTAAA
CAAAAGCCCAAACGCAAGAAGAATTCCTGGAAAAAACCTTTTAAACAATT
ACAAAAGAAACAACAATAAGACACGTTTTACACCAAGGGTTTTTATAACC
TCAACAGTAAACTTATATTCAATTTTAGCTGACTAATTTCGCTTGTATAA
TGCAATAGATCTTTAACTTTTTGTTAATTTTTTGTCTGAAAGATAACACA
TTTCTTCCTATGGAGGAACTATTACACACCGTAAATTTATATAATGTCGA
AAACTCCTACCAGTTCCGTCACTCTTCCTTGGACTTGGAGAGTTTATTTT
TTGATTCTGCTTCACACATTATCTTCATTCCTTCTCAAAGTGATACTTCG
GCAAGTTGAAATGTTAGAAGCTGTGTTTCGATCTTTTGTTCCACCTTTAA
AAAGCCTCCAGACTTTCTTGTTGCATAGATACAAAATGCAAACGAAAATT
CCCTTTAAGCTTCTCACCAAGACAAACAGAAATGAAAAAATCAAATTCAC
TGTCATCAATTCTTTACCTGGTATTTGTACATAGCCAATGATATCAATCA
AACCCAACCCAATAATCAACTTTAAAGCAATTCTCACTAAGTCAGCATTG
GCTTGATCGGACTGTAAAGTTTTTCTTGTTTTTTTCTTAGCCAAGTGTAT
TTTGAGCAGAGTTTTGGCTAAGGCCAGAATGGATATCAAATGCATGACAA
CCATTGGAGTGATAACAGACCACACCCTTGTGGGGGTATGTGTGACCCAG
CACATTTTATCATAACCAACGTTGACATTGCCAGCCTCGTTCAAAATGAC
TGCAGGGAGTACGAAAAACAAAGGTAAAAT

Coding sequence (CDS) from alignment at sc0000062:430112..437041-

>TCONS_00006072 ID=TCONS_00006072|Name=TCONS_00006072|organism=Clytia hemisphaerica|type=CDS|length=6534bp|location=Sequence derived from alignment at sc0000062:430112..437041- (Clytia hemisphaerica)
AGGAAGACGAGACTCCATCAAGAAGACATCTAGTTAAACAAAAGCCCAAA
CGCAAGAAGAATTCCTGGAAAAAACCTTTTAAACAATTACAAAAGAAACA
ACAATAAGAAAATATGTTCGTAACTCCCGACAAGGAGGTATGGGAACAGG
TAGCGAGAGTATGATTGGTTTGGAAGCGAAAGACCCTCCTTTCACAGGAC
ATGGCCCTGAGGATGCCAATGGACTTTCGGAATCAAACCTTGGTGAACAA
GGAGGAGCTGGAGAAATGACGAACGAAGCTTCAGTGAAAATGAAAGCACC
CGCAATTTCTATGTCTCACTCATTAGACGATCTCGATAATTCAGTCAATA
TCCAAGGCGATGGAGAAATCGGTAAAGTCCAAAATGCTGCTGGCGTCGAA
GGTTTGGGCGGTGAGATGAATGGTATCCCAACCGGTATGGGCGCAGGGGC
GGAACCATTGGGCGCATTTGAAAATGAAGACACACCACCTGGAACAGAAA
CACAACCTCAAAGTTTGGGCGAAGACCAACATATGTCATTCAATGATGAG
ATGCCAGGACAAGAAATGAACGAGGGACCAGTTGACCACAAACCAGAAGC
CACCAAAAATGCAGAAGCAGCGAAAAAACAAGGTCACGGCAAGACAATCG
CCAATAAACGAAAACATATCCTGAGGTTGACATACACATTCCTTTTGTTG
GCGTGCCTTGGCTGCATGACTTGTAAAGGAAGACGAGACTCCATCAAGAA
GACATCTAGTTAAACAAAAGCCCAAACGCAAGAAGAATTCCTGGAAAAAA
CCTTTTAAACAATTACAAAAGAAACAACAATAAGAAAATATGTTCGTAAC
TCCCGACAAGGAGGTATGGGAACAGGTAGCGAGAGTATGATTGGTTTGGA
AGCGAAAGACCCTCCTTTCACAGGACATGGCCCTGAGGATGCCAATGGAC
TTTCGGAATCAAACCTTGGTGAACAAGGAGGAGCTGGAGAAATGACGAAC
GAAGCTTCAGTGAAAATGAAAGCACCCGCAATTTCTATGTCTCACTCATT
AGACGATCTCGATAATTCAGTCAATATCCAAGGCGATGGAGAAATCGGTA
AAGTCCAAAATGCTGCTGGCGTCGAAGGTTTGGGCGGTGAGATGAATGGT
ATCCCAACCGGTATGGGCGCAGGGGCGGAACCATTGGGCGCATTTGAAAA
TGAAGACACACCACCTGGAACAGAAACACAACCTCAAAGTTTGGGCGAAG
ACCAACATATGTCATTCAATGATGAGATGCCAGGACAAGAAATGAACGAG
GGACCAGTTGACCACAAACCAGAAGCCACCAAAAATGCAGAAGCAGCGAA
AAAACAAGGTCACGGCAAGACAATCGCCAATAAACGAAAACATATCCTGA
GGTTGACATACACATTCCTTTTGTTGGCGTGCCTTGGCTGCATGACTTGT
AAAGGAAGACGAGACTCCATCAAGAAGACATCTAGTTAAACAAAAGCCCA
AACGCAAGAAGAATTCCTGGAAAAAACCTTTTAAACAATTACAAAAGAAA
CAACAATAAGAAAATATGTTCGTAACTCCCGACAAGGAGGTATGGGAACA
GGTAGCGAGAGTATGATTGGTTTGGAAGCGAAAGACCCTCCTTTCACAGG
ACATGGCCCTGAGGATGCCAATGGACTTTCGGAATCAAACCTTGGTGAAC
AAGGAGGAGCTGGAGAAATGACGAACGAAGCTTCAGTGAAAATGAAAGCA
CCCGCAATTTCTATGTCTCACTCATTAGACGATCTCGATAATTCAGTCAA
TATCCAAGGCGATGGAGAAATCGGTAAAGTCCAAAATGCTGCTGGCGTCG
AAGGTTTGGGCGGTGAGATGAATGGTATCCCAACCGGTATGGGCGCAGGG
GCGGAACCATTGGGCGCATTTGAAAATGAAGACACACCACCTGGAACAGA
AACACAACCTCAAAGTTTGGGCGAAGACCAACATATGTCATTCAATGATG
AGATGCCAGGACAAGAAATGAACGAGGGACCAGTTGACCACAAACCAGAA
GCCACCAAAAATGCAGAAGCAGCGAAAAAACAAGGTCACGGCAAGACAAT
CGCCAATAAACGAAAACATATCCTGAGGTTGACATACACATTCCTTTTGT
TGGCGTGCCTTGGCTGCATGACTTGTAAAGGAAGACGAGACTCCATCAAG
AAGACATCTAGTTAAACAAAAGCCCAAACGCAAGAAGAATTCCTGGAAAA
AACCTTTTAAACAATTACAAAAGAAACAACAATAAGAAAATATGTTCGTA
ACTCCCGACAAGGAGGTATGGGAACAGGTAGCGAGAGTATGATTGGTTTG
GAAGCGAAAGACCCTCCTTTCACAGGACATGGCCCTGAGGATGCCAATGG
ACTTTCGGAATCAAACCTTGGTGAACAAGGAGGAGCTGGAGAAATGACGA
ACGAAGCTTCAGTGAAAATGAAAGCACCCGCAATTTCTATGTCTCACTCA
TTAGACGATCTCGATAATTCAGTCAATATCCAAGGCGATGGAGAAATCGG
TAAAGTCCAAAATGCTGCTGGCGTCGAAGGTTTGGGCGGTGAGATGAATG
GTATCCCAACCGGTATGGGCGCAGGGGCGGAACCATTGGGCGCATTTGAA
AATGAAGACACACCACCTGGAACAGAAACACAACCTCAAAGTTTGGGCGA
AGACCAACATATGTCATTCAATGATGAGATGCCAGGACAAGAAATGAACG
AGGGACCAGTTGACCACAAACCAGAAGCCACCAAAAATGCAGAAGCAGCG
AAAAAACAAGGTCACGGCAAGACAATCGCCAATAAACGAAAACATATCCT
GAGGTTGACATACACATTCCTTTTGTTGGCGTGCCTTGGCTGCATGACTT
GTAAAGGAAGACGAGACTCCATCAAGAAGACATCTAGTTAAACAAAAGCC
CAAACGCAAGAAGAATTCCTGGAAAAAACCTTTTAAACAATTACAAAAGA
AACAACAATAAGAAAATATGTTCGTAACTCCCGACAAGGAGGTATGGGAA
CAGGTAGCGAGAGTATGATTGGTTTGGAAGCGAAAGACCCTCCTTTCACA
GGACATGGCCCTGAGGATGCCAATGGACTTTCGGAATCAAACCTTGGTGA
ACAAGGAGGAGCTGGAGAAATGACGAACGAAGCTTCAGTGAAAATGAAAG
CACCCGCAATTTCTATGTCTCACTCATTAGACGATCTCGATAATTCAGTC
AATATCCAAGGCGATGGAGAAATCGGTAAAGTCCAAAATGCTGCTGGCGT
CGAAGGTTTGGGCGGTGAGATGAATGGTATCCCAACCGGTATGGGCGCAG
GGGCGGAACCATTGGGCGCATTTGAAAATGAAGACACACCACCTGGAACA
GAAACACAACCTCAAAGTTTGGGCGAAGACCAACATATGTCATTCAATGA
TGAGATGCCAGGACAAGAAATGAACGAGGGACCAGTTGACCACAAACCAG
AAGCCACCAAAAATGCAGAAGCAGCGAAAAAACAAGGTCACGGCAAGACA
ATCGCCAATAAACGAAAACATATCCTGAGGTTGACATACACATTCCTTTT
GTTGGCGTGCCTTGGCTGCATGACTTGTAAAGGAAGACGAGACTCCATCA
AGAAGACATCTAGTTAAACAAAAGCCCAAACGCAAGAAGAATTCCTGGAA
AAAACCTTTTAAACAATTACAAAAGAAACAACAATAAGAAAATATGTTCG
TAACTCCCGACAAGGAGGTATGGGAACAGGTAGCGAGAGTATGATTGGTT
TGGAAGCGAAAGACCCTCCTTTCACAGGACATGGCCCTGAGGATGCCAAT
GGACTTTCGGAATCAAACCTTGGTGAACAAGGAGGAGCTGGAGAAATGAC
GAACGAAGCTTCAGTGAAAATGAAAGCACCCGCAATTTCTATGTCTCACT
CATTAGACGATCTCGATAATTCAGTCAATATCCAAGGCGATGGAGAAATC
GGTAAAGTCCAAAATGCTGCTGGCGTCGAAGGTTTGGGCGGTGAGATGAA
TGGTATCCCAACCGGTATGGGCGCAGGGGCGGAACCATTGGGCGCATTTG
AAAATGAAGACACACCACCTGGAACAGAAACACAACCTCAAAGTTTGGGC
GAAGACCAACATATGTCATTCAATGATGAGATGCCAGGACAAGAAATGAA
CGAGGGACCAGTTGACCACAAACCAGAAGCCACCAAAAATGCAGAAGCAG
CGAAAAAACAAGGTCACGGCAAGACAATCGCCAATAAACGAAAACATATC
CTGAGGTTGACATACACATTCCTTTTGTTGGCGTGCCTTGGCTGCATGAC
TTGTAAAGGAAGACGAGACTCCATCAAGAAGACATCTAGTTAAACAAAAG
CCCAAACGCAAGAAGAATTCCTGGAAAAAACCTTTTAAACAATTACAAAA
GAAACAACAATAAGAAAATATGTTCGTAACTCCCGACAAGGAGGTATGGG
AACAGGTAGCGAGAGTATGATTGGTTTGGAAGCGAAAGACCCTCCTTTCA
CAGGACATGGCCCTGAGGATGCCAATGGACTTTCGGAATCAAACCTTGGT
GAACAAGGAGGAGCTGGAGAAATGACGAACGAAGCTTCAGTGAAAATGAA
AGCACCCGCAATTTCTATGTCTCACTCATTAGACGATCTCGATAATTCAG
TCAATATCCAAGGCGATGGAGAAATCGGTAAAGTCCAAAATGCTGCTGGC
GTCGAAGGTTTGGGCGGTGAGATGAATGGTATCCCAACCGGTATGGGCGC
AGGGGCGGAACCATTGGGCGCATTTGAAAATGAAGACACACCACCTGGAA
CAGAAACACAACCTCAAAGTTTGGGCGAAGACCAACATATGTCATTCAAT
GATGAGATGCCAGGACAAGAAATGAACGAGGGACCAGTTGACCACAAACC
AGAAGCCACCAAAAATGCAGAAGCAGCGAAAAAACAAGGTCACGGCAAGA
CAATCGCCAATAAACGAAAACATATCCTGAGGTTGACATACACATTCCTT
TTGTTGGCGTGCCTTGGCTGCATGACTTGTAAAGGAAGACGAGACTCCAT
CAAGAAGACATCTAGTTAAACAAAAGCCCAAACGCAAGAAGAATTCCTGG
AAAAAACCTTTTAAACAATTACAAAAGAAACAACAATAAGAAAATATGTT
CGTAACTCCCGACAAGGAGGTATGGGAACAGGTAGCGAGAGTATGATTGG
TTTGGAAGCGAAAGACCCTCCTTTCACAGGACATGGCCCTGAGGATGCCA
ATGGACTTTCGGAATCAAACCTTGGTGAACAAGGAGGAGCTGGAGAAATG
ACGAACGAAGCTTCAGTGAAAATGAAAGCACCCGCAATTTCTATGTCTCA
CTCATTAGACGATCTCGATAATTCAGTCAATATCCAAGGCGATGGAGAAA
TCGGTAAAGTCCAAAATGCTGCTGGCGTCGAAGGTTTGGGCGGTGAGATG
AATGGTATCCCAACCGGTATGGGCGCAGGGGCGGAACCATTGGGCGCATT
TGAAAATGAAGACACACCACCTGGAACAGAAACACAACCTCAAAGTTTGG
GCGAAGACCAACATATGTCATTCAATGATGAGATGCCAGGACAAGAAATG
AACGAGGGACCAGTTGACCACAAACCAGAAGCCACCAAAAATGCAGAAGC
AGCGAAAAAACAAGGTCACGGCAAGACAATCGCCAATAAACGAAAACATA
TCCTGAGGTTGACATACACATTCCTTTTGTTGGCGTGCCTTGGCTGCATG
ACTTGTAAAGGAAGACGAGACTCCATCAAGAAGACATCTAGTTAAACAAA
AGCCCAAACGCAAGAAGAATTCCTGGAAAAAACCTTTTAAACAATTACAA
AAGAAACAACAATAAGAAAATATGTTCGTAACTCCCGACAAGGAGGTATG
GGAACAGGTAGCGAGAGTATGATTGGTTTGGAAGCGAAAGACCCTCCTTT
CACAGGACATGGCCCTGAGGATGCCAATGGACTTTCGGAATCAAACCTTG
GTGAACAAGGAGGAGCTGGAGAAATGACGAACGAAGCTTCAGTGAAAATG
AAAGCACCCGCAATTTCTATGTCTCACTCATTAGACGATCTCGATAATTC
AGTCAATATCCAAGGCGATGGAGAAATCGGTAAAGTCCAAAATGCTGCTG
GCGTCGAAGGTTTGGGCGGTGAGATGAATGGTATCCCAACCGGTATGGGC
GCAGGGGCGGAACCATTGGGCGCATTTGAAAATGAAGACACACCACCTGG
AACAGAAACACAACCTCAAAGTTTGGGCGAAGACCAACATATGTCATTCA
ATGATGAGATGCCAGGACAAGAAATGAACGAGGGACCAGTTGACCACAAA
CCAGAAGCCACCAAAAATGCAGAAGCAGCGAAAAAACAAGGTCACGGCAA
GACAATCGCCAATAAACGAAAACATATCCTGAGGTTGACATACACATTCC
TTTTGTTGGCGTGCCTTGGCTGCATGACTTGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003453XLOC_003453Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006072-exon-sc0000062-1575043694:436955..437041TCONS_00006072-exon-sc0000062-1575043694:436955..437041Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1575043694:436533..436586TCONS_00006072-exon-sc0000062-1575043694:436533..436586Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1575043694:434950..434988TCONS_00006072-exon-sc0000062-1575043694:434950..434988Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1575043694:434492..434539TCONS_00006072-exon-sc0000062-1575043694:434492..434539Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1575043694:434062..434115TCONS_00006072-exon-sc0000062-1575043694:434062..434115Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1575043694:433537..433695TCONS_00006072-exon-sc0000062-1575043694:433537..433695Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1575043694:432491..432646TCONS_00006072-exon-sc0000062-1575043694:432491..432646Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1575043694:431944..432051TCONS_00006072-exon-sc0000062-1575043694:431944..432051Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1575043694:430112..430979TCONS_00006072-exon-sc0000062-1575043694:430112..430979Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1510915933:436955..437041TCONS_00006072-exon-sc0000062-1510915933:436955..437041Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1510915933:436533..436586TCONS_00006072-exon-sc0000062-1510915933:436533..436586Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1510915933:434950..434988TCONS_00006072-exon-sc0000062-1510915933:434950..434988Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1510915933:434492..434539TCONS_00006072-exon-sc0000062-1510915933:434492..434539Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1510915933:434062..434115TCONS_00006072-exon-sc0000062-1510915933:434062..434115Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1510915933:433537..433695TCONS_00006072-exon-sc0000062-1510915933:433537..433695Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1510915933:432491..432646TCONS_00006072-exon-sc0000062-1510915933:432491..432646Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1510915933:431944..432051TCONS_00006072-exon-sc0000062-1510915933:431944..432051Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1510915933:430112..430979TCONS_00006072-exon-sc0000062-1510915933:430112..430979Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1491911889:436955..437041TCONS_00006072-exon-sc0000062-1491911889:436955..437041Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1491911889:436533..436586TCONS_00006072-exon-sc0000062-1491911889:436533..436586Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1491911889:434950..434988TCONS_00006072-exon-sc0000062-1491911889:434950..434988Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1491911889:434492..434539TCONS_00006072-exon-sc0000062-1491911889:434492..434539Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1491911889:434062..434115TCONS_00006072-exon-sc0000062-1491911889:434062..434115Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1491911889:433537..433695TCONS_00006072-exon-sc0000062-1491911889:433537..433695Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1491911889:432491..432646TCONS_00006072-exon-sc0000062-1491911889:432491..432646Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1491911889:431944..432051TCONS_00006072-exon-sc0000062-1491911889:431944..432051Clytia hemisphaericaexon
TCONS_00006072-exon-sc0000062-1491911889:430112..430979TCONS_00006072-exon-sc0000062-1491911889:430112..430979Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006072-proteinTCONS_00006072-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000062supercontigsc0000062:430112..437041 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	6.62726	8.03158	0.489749	0.00579375	10.077	13.5013	13.6878	14.0167	10.4697	26.3639	15.2163	12.2334	0.22933	0	6.23538	2.77863	3.40385	4.54775	11.0876	8.17293	3.06512	0.160851	0.226226	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006072 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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