|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006188 ID=TCONS_00006188|Name=TCONS_00006188|organism=Clytia hemisphaerica|type=transcript|length=1011bp
CAGAGATGAATTTCTGATGACATCATTTATttacacacatttttttattt
ggggGTTTACCCAggttttgcctcgctaacctcAAGCTGAATTGGAAAGA
ATGGTCAAATCTTACCTGGGAAGTTAAGTCCATATTTAGACCATTTCAAA
AGGGGGaagaaattacctaaatgtaaacaaaccagGAAACCCCAGAAATC
TGTCTACAAGTCATTCTCTGTACATTTGGTACCAAAATTTAGATGGATTG
TCGGTCTCTTTCTAAATCTATAAATctgacttcaaaaatgatgtttttat
cttttagtgagtcaacaaaacaaacaatctaATATAAAGAAGACAACTAG
ATCAGCAACAAAGACGAGCAGTGAGAAACATGGTGAGTCCACTTATTTTA
TGCCAGGCTTTTGCAGCCAATTGTGTCAGGATTTAAACCTGCTTTGTTTG
GCTGGGTACCTATAGTAAGTAGGGGTGTATCTACATGAAAtagtttttca
caatttattcACCTAGACATTATTTTTCCCCTATCTATTACTTTTTGAAT
TTCCAGTCATTCTATATGATGTGTGTCCAGCATTTAATTATTGCTGATGC
AAATAGCTGACACCAGTGTAATGTATTATAGAACTTGTAACtctaaaact
taaaaatagAGCTCATTTTAAGACCGCAACTACTGTACTGTGGTTTGATG
TCTAATCTTGTCATGAATGAATGTTGGAATGTTTTGTCTTCACTTTAATC
GCTGTATTTGTTTGAGTTGAGTTTGAGTCAGAGTTGTGTTAGAGCTATTT
TGGTCCTTTCAAATTGGTACCAattatatttgtttgttttgacttttgat
aaaaatgctttttttccattgcagttttgcctatagacgggtttcaatgt
tttgatttttgtgcgGGCGGTCCAATGCGGGCGGGCCAATGCGATCGTTT
TTTGGAGGCAAAAAGACTTACGATTTAAATGGAGGCAAGTGGATATCAAT
CAATATTTCGA Run BLAST on NCBI transcript from alignment at sc0000063:160534..161544 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006188 ID=TCONS_00006188|Name=TCONS_00006188|organism=Clytia hemisphaerica|type=transcript|length=1011bp|location=Sequence derived from alignment at sc0000063:160534..161544 (Clytia hemisphaerica)
TCGAAATATTGATTGATATCCACTTGCCTCCATTTAAATCGTAAGTCTTT
TTGCCTCCAAAAAACGATCGCATTGGCCCGCCCGCATTGGACCGCCcgca
caaaaatcaaaacattgaaacccgtctataggcaaaactgcaatggaaaa
aaagcatttttatcaaaagtcaaaacaaacaaatataatTGGTACCAATT
TGAAAGGACCAAAATAGCTCTAACACAACTCTGACTCAAACTCAACTCAA
ACAAATACAGCGATTAAAGTGAAGACAAAACATTCCAACATTCATTCATG
ACAAGATTAGACATCAAACCACAGTACAGTAGTTGCGGTCTTAAAATGAG
CTctatttttaagttttagaGTTACAAGTTCTATAATACATTACACTGGT
GTCAGCTATTTGCATCAGCAATAATTAAATGCTGGACACACATCATATAG
AATGACTGGAAATTCAAAAAGTAATAGATAGGGGAAAAATAATGTCTAGG
TgaataaattgtgaaaaactaTTTCATGTAGATACACCCCTACTTACTAT
AGGTACCCAGCCAAACAAAGCAGGTTTAAATCCTGACACAATTGGCTGCA
AAAGCCTGGCATAAAATAAGTGGACTCACCATGTTTCTCACTGCTCGTCT
TTGTTGCTGATCTAGTTGTCTTCTTTATATtagattgtttgttttgttga
ctcactaaaagataaaaacatcatttttgaagtcagATTTATAGATTTAG
AAAGAGACCGACAATCCATCTAAATTTTGGTACCAAATGTACAGAGAATG
ACTTGTAGACAGATTTCTGGGGTTTCctggtttgtttacatttaggtaat
ttcttCCCCCTTTTGAAATGGTCTAAATATGGACTTAACTTCCCAGGTAA
GATTTGACCATTCTTTCCAATTCAGCTTgaggttagcgaggcaaaaccTG
GGTAAACccccaaataaaaaaatgtgtgtaaATAAATGATGTCATCAGAA
ATTCATCTCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006188-exon-sc0000063-1491911889:160534..161544 | TCONS_00006188-exon-sc0000063-1491911889:160534..161544 | Clytia hemisphaerica | exon |
| TCONS_00006188-exon-sc0000063-1510915933:160534..161544 | TCONS_00006188-exon-sc0000063-1510915933:160534..161544 | Clytia hemisphaerica | exon |
| TCONS_00006188-exon-sc0000063-1575043694:160534..161544 | TCONS_00006188-exon-sc0000063-1575043694:160534..161544 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000063 | supercontig | sc0000063:160534..161544 . |
Blast
The following BLAST results are available for this feature:
|
