TCONS_00006195 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006195
Unique NameTCONS_00006195
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length183

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006195 ID=TCONS_00006195|Name=TCONS_00006195|organism=Clytia hemisphaerica|type=transcript|length=183bp
CAGTCATACAACATGATAATACTGCTCTTGATCGGACAGTTCTCGCCACC
CTCCAGTAGAGAAAGCTTATCAACAAAGCAATGGTATAGATTCCAAATAc
ctatcaaaaaaaattgtgaatcacattttcacttttatttaaTAACAAAG
GAGGTTCTCAAACATGTCAAAAAATATTAATGG
Run BLAST on NCBI

transcript from alignment at sc0000063:379023..379205

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006195 ID=TCONS_00006195|Name=TCONS_00006195|organism=Clytia hemisphaerica|type=transcript|length=183bp|location=Sequence derived from alignment at sc0000063:379023..379205 (Clytia hemisphaerica)
CCATTAATATTTTTTGACATGTTTGAGAACCTCCTTTGTTAttaaataaa
agtgaaaatgtgattcacaattttttttgataggTATTTGGAATCTATAC
CATTGCTTTGTTGATAAGCTTTCTCTACTGGAGGGTGGCGAGAACTGTCC
GATCAAGAGCAGTATTATCATGTTGTATGACTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003541XLOC_003541Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006195-exon-sc0000063-1491911889:379023..379205TCONS_00006195-exon-sc0000063-1491911889:379023..379205Clytia hemisphaericaexon
TCONS_00006195-exon-sc0000063-1510915933:379023..379205TCONS_00006195-exon-sc0000063-1510915933:379023..379205Clytia hemisphaericaexon
TCONS_00006195-exon-sc0000063-1575043694:379023..379205TCONS_00006195-exon-sc0000063-1575043694:379023..379205Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000063supercontigsc0000063:379023..379205 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006195 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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