TCONS_00006290 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006290
Unique NameTCONS_00006290
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1638

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006290 ID=TCONS_00006290|Name=TCONS_00006290|organism=Clytia hemisphaerica|type=transcript|length=1638bp
GAATTATAAagcgaaaaaaagtaaaataaatcaCCAAAGATGCCATTTAC
ATTCAAAGTTGAAGATGTGAAATCAGCGGGGCCAAAAAGTTACGGAAAGA
ACCACTCACGGATGTTTGAACCTCAACAAGGTCAATCTTTAGAAGAAGCT
TGGAAACAACATGGTATCATTGAAGCGATGTCAGATGCTCCCAAAAATGT
TGTGGAAACTTTCACCAAACAAAACCTACTGGTGAAATCAGTTCACGCAG
CATTTTATGGTCATCATCCGTTGATTCTATCTCCTGATGTCATTTGGTTA
ACAATCGCTCAAGGTTTAGCCAATCATAtcgatcagAATGCAGAAGAACT
TCGCAAGAAATTTGTCAATCAcgaaggaaaaaaagaaatagaaatcgAAA
GACCAACTTTTGTTAAAGGATCCAAAAACAACGACTGGCCTGGTGTTTTT
CCTGAATTTAGTGAAAAGATCGAAGCAAATACAGTTGAGGGGACTGTCAA
ATTGATTGAAAGCGATTTCTCAACGACTGGTCCTGTTGAAAAGATTGTCT
CACACATCACTTTGATGGATGCAGTCCAACATTATTTCTCATACAGCATG
TGCTGTGGTTGTGGCTTTCCGGAGATCACCCTCACCGGTGAACCGGATGA
CTGGAAGAAAATCCGGTCGAAAGCTGCACTGTTGAAACAATATGGTCTTG
AATGGTGGTTGAAAGCTTTGTTACCTGCTTTGGATCAGTTCGTGCTTGCT
TCTGAAGGAAAACCTGActtgaatttttggaaatcactTTGTAACATTAA
TGTAGGGACAAGTTTTCGTGTTTACGAGCCCGTCACTGGCTGGATTCAGG
CTTTCTTTCTCTACCTCAATGCTGCAGGGTAcggttttgatgatttcgat
cGGTTTGCAGAAGCAAAAGATGGCGTCGCCAAGAAACAATTGCAGAAGAA
TGAATGTCTTGAACACTATATGGAAAGCTTCCAGCAGAAGGTTGGCATAA
AAGAATTTGAAGCtgataaaaacaagccaagagATAGGGAAGAATTTCGT
TTCGCTGATCCACCCTCAGGGACCAAACGAGGTATCAAATTAGAATTATT
TCCACCCGCCCTTTCTTCCGCCCCTTTCGTTTACAAAGACACGGtgacaa
ataaaaaacattcaatGGCGTTTATGGGTGGGTTAACCACCCTTGTTCAA
CACCCTAGTGGCGCCAtcgaagcaaaaataggatggGCGGTCATCGATTC
TGGCAAATGggaaccaatcaaattttataAAGAAACCTTGGTTTAGTCCA
ATGCATACATATAGTGTGTTCATAAAAAAGGAAATGGAATTTGCTGTTAA
TTTTTAactattaatttttttaaagttaatttttttaaagttaatttatt
tttatactAAATTATATTAGATAATAGTTTATGTaattaatgatttttaa
ataccctaatttttaattttttaagatttctttttaaatcacTCAAGGTG
AAATGTGTAGCTAGCGGTAAAGATTGTAGAATGAtctccggggggggggc
actcgttCTGAAAACGATCACACGTTCGGCCCaaaaatttactttcaaaa
taggACCTTCACAGTGCAGAAAATAAGCTACGAAATTT
Run BLAST on NCBI

protein sequence of TCONS_00006290-protein

>TCONS_00006290-protein ID=TCONS_00006290-protein|Name=TCONS_00006290-protein|organism=Clytia hemisphaerica|type=polypeptide|length=418bp
MPFTFKVEDVKSAGPKSYGKNHSRMFEPQQGQSLEEAWKQHGIIEAMSDA
PKNVVETFTKQNLLVKSVHAAFYGHHPLILSPDVIWLTIAQGLANHIDQN
AEELRKKFVNHEGKKEIEIERPTFVKGSKNNDWPGVFPEFSEKIEANTVE
GTVKLIESDFSTTGPVEKIVSHITLMDAVQHYFSYSMCCGCGFPEITLTG
EPDDWKKIRSKAALLKQYGLEWWLKALLPALDQFVLASEGKPDLNFWKSL
CNINVGTSFRVYEPVTGWIQAFFLYLNAAGYGFDDFDRFAEAKDGVAKKQ
LQKNECLEHYMESFQQKVGIKEFEADKNKPRDREEFRFADPPSGTKRGIK
LELFPPALSSAPFVYKDTVTNKKHSMAFMGGLTTLVQHPSGAIEAKIGWA
VIDSGKWEPIKFYKETLV
Run BLAST on NCBI

transcript from alignment at sc0000066:181766..191245-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006290 ID=TCONS_00006290|Name=TCONS_00006290|organism=Clytia hemisphaerica|type=transcript|length=9480bp|location=Sequence derived from alignment at sc0000066:181766..191245- (Clytia hemisphaerica)
GAATTATAAAGCGAAAAAAAGTAAAATAAATCACCAAAGATGCCATTTAC
ATTCAAAGTTGAAGATGTGAAATCAGCGGGGCCAAAAAGTTACGGAAAGA
ACCACTCACGGATGTTTGAACCTCAACAAGGTCAATCTTTAGAAGAAGCT
TGGAAACAACATGGTATCATTGAAGCGATGTCAGATGCTCCCAAAAATGT
TGTGGAAACTTTCACCAAACAAAACCTACTGGTATGATCTCCATTTTGTA
CTCTTGTTACATAGCTACGATTTATAGACTTGATATGCAAATGTTCCATA
CCCCAGGTCAATCCCGTCATGTGGGGAGAATTCGGTAGACAGAAACTTAA
GAGTCATGTTGGTGACTAGGTATTGATCCGACAATACAGGTGGGTGAAGT
AAGATTATACTGGCCTTGTTTACTATTAGCCTCATTGAATTAACACATTC
GAACCAAAACCAGTTTGCCATTATCTGGTACACAGTAAAACTCATAGCGT
AGACGACTTTCAGTTGTGGCTGGTGTTAAGGAGATTTGAGAATTTATGAC
GGAAAGTGTTGCCTCCTAAAAGGAACTTATACGGAAAAGAACAATTTCCG
TCAGTTAAATAGAGACACAGGAATCTGATCTACTGTTGAAATATTAATTC
CCTTATTATTTTCAGGTGAAATCAGTTCACGCAGCATTTTATGGTCATCA
TCCGTTGATTCTATCTCCTGATGTCATTTGGTTAACAATCGCTCAAGGTT
TAGCCAATCATATCGATCAGGTATGTTTTTCAATGACAAGTATTTGTTAA
ACATTTCCAGAAAAGCTGAATATTCTTACCAACAAAATATGGACCTACAT
TGTTGTCATGAACCTATGGCTACCAAACCCTCATTCTATGGATCTGCTCA
GTTTCCTTTTCATTCTGTCACGCCAGTTATCTTTCAGGTCCTTGATTATC
ATACTTCGTGCTGAACTCTCATCTGGAAATAATTAAGAACTTAATAATAA
GAACTTCGCAAGAAATTTGTCAATCACGAAGAAAAGAACGAGATTGAGAT
TCTATTGAGACAGACTTTAGTACATATACAGGCCTTCATTAAATCAAAAT
CCGTTTGCATTCTGTGAAAGGTATTACATATCTCAATGTAAACTTTTGAT
AATCTTTCTTTAGAATGCAGAAGAACTTCGCAAGAAATTTGTCAATCACG
AAGGAAAAAAAGAAATAGAAATCGAAAGACCAACTTTTGTTAAAGGATCC
AAAAACAACGACTGGCCTGGTGTTTTTCCTGAATTTAGTGAAAAGATCGA
AGCAAATACAGTTGAGGGGACTGTCAAATTGATTGAAAGCGATTTCTCAA
CGACTGGTCCTGTTGAAAAGATTGTAAGTTTATAAAGCTCGTTCATGTTG
TCTTTTTATAGCAGTGCCGTAGATACCGGAGTAGGAGGAAATCATGCTGT
AAAGTTCAAAGCCATCGCACTTCGCGTTGTCATTGCAAACAAAATTTCAT
TCAAAATGACCATACTGTTACTATATCATGTAGATTGTATCAATATCCTC
TACCTTGAAATGATTTCTCTGATATAAGCCAACTTTTCGTTACCAGGTCT
CACACATCACTTTGATGGATGCAGTCCAACATTATTTCTCATACAGCATG
TGCTGTGGTTGTGGCTTTCCGGAGATCACCCTCACCGGTGAACCGGATGA
CTGGAAGAAAATCCGGTCGAAAGCTGCACTGTTGAAACAATATGGTCTTG
AATGGTGGTTGAAAGCTTTGTTACCTGCTTTGGATCAGTTCGTGCTTGCT
TCTGAAGGAAAACCTGACTTGAATTTTTGGAAATCACTTTGTAACATTAA
TGTAGGAACAAGTTTTCCTGTTTACGAGCCCGTCACTGGCTGGATTCAGG
TAATTTTCTTTCTATCATGTGACCTCGCTCTCACTGTAGTTTTGTTAGTC
AAGTTTTTTAAGATTAAAAATGTTTGCTTAAAAATGTGCAAATCTCGCTA
GAAAAATCAAAAAACCTTCCTTAAAACTTTTGAAATATAGTAAAAACATA
TGTAACAGTACACTCTAGGGAAGGGGTTGAATATTTTGCACAATCAATTC
ACTTTCATTATCTTACTTCGTTTTCCAGGCTTTCTTTCCCTACCTCAATG
CTACAGGGTACGGTCTTGAAGATTTTGATCGGTTTGCAGAAGCCAAAGAT
GGCGTCGCCAAGAAGCAATTACAGAAAAATGAATGTCTTGAACACTATAT
GGAAAGCTTCCAGCAGAAGGTTTGTGTTATATTGTCTGTGTTATATTGTC
TGTGTTTGTTTCATAAGTCTACTATTTTTCAGCCCAGGAAAAAGAGAAGG
CACCAAATCCTATTTCTACTGCACATTGGAAGACTTATACATGTTTTTTT
TTCTCATCATAACAAAGGTTGGCATAAAAGAATTTGAAGCTGATAAAAAC
AAGCCAAGAGATAGGGAAGAATTTCGTTTCGCTGATCCACCCTCAGGGAC
CAAACGAGGTATCAAATTAAAATTATTTCCACCCGCCCTTTCTTCCGCCC
CTTTCGTTTACAAAGACATGATGACCATGAAAAAACATTCAATGGCGTTT
ATGGGTGGTTTAACCACCCTTGTTCAACACCCTGATGGTGCAATTGAGCC
AAAAATGGGATGGGCTGTCATGGATTCTGGCAAATGGGAACAGATTAAAT
AAATTAAAAGACTCTTGAAACTGTTCAGTCACTTTTTGTAGTGTGTACTG
ATTCTTAAAACCAATTAAAAAGAAAAACTGAAGACCTTGCTTTCTTTCTT
CTTTAAAATGAGAATAGATTTATCATATTGTAATTTATGTAATTAGAGGT
ATTTGATTTTTTGTATAATTTTGTAATATTTTGTAACTTATTTTCCAATT
ATTGATTCCTACACAACTTTTTGCACACACAATGTAATGGTAGGAGAACT
TAAGAACGCATATCTATTTTAAGACAATTTGCGAGTATTTCATTCTCCAC
GATGCATATCTTCTGAGATATTGAAAGAGTTTAGTTTTACGGATTCTGAA
TTTTGTACTGATTTATTGTTTGTAATTTAATAAGAATACACTTTATAAGA
ATATCCACGATGAAAATAGCCAAAAAATTAAGAATAATGCTAAGAATATC
ACCATCATGGAATTTTGCTACTCAAGATAAGAATGCCATTTTTAGAGCAT
TTCCAATTATAAATTGTCAATTACCCCCAAATAAGGCTCACTCCTTTCAC
AAAAATGCCATTTTATGTTTGAGACGTATGTAGTAAATGTTAAATCTGGT
CTGAATTAGGATCCTAACCTAAGAATGCCTCTGTAAGAATGTTTTAGGAT
GATTTTCCCAAAAAAGTTAAGAATATCCATGATGAAATGGATTTACACCA
TTCTTATTAAAAAAGCGTGTACTTGATAAAAGTTACTTTTTCCGACGCAA
ATCACAAAATTTGCAATACCCTGTTGTTATGTAAAATCATTACTTCTTCT
TTTTGTTTACCTTCCAGAAAATGACTGAAAATTGTGAAAACGTGTTATCC
AACAAAAAACCTACAAGTGACCTCGAAGCGTATTTTCAACTTATTTTGAA
GGGGCAATTTTATTTGTATTTGTTTTATTAATTTATTTCAGGTAAAATGT
TGTTCTTCATATACTTGAAGAAAAAATTATCACTCCTACTCATTACTTTC
AGAAAAGAAATATAAAGCGGAAAAGAATAAAATAAATCACAAAAGATGAC
ATTTACATTTAATGTTGAAGATGTGAAATCAGCGGGACCAAAAAGTTACG
GAAAGAATCACTCATGGATGTTTGAACCTCAACAAGGTCAATCTTTAGAA
GAAGCTTGGAAACAACATGGTATCATTGAAGCGATGTCAGAAGCTCCCAA
AAATGTTGTGGAAACCTTCACCAAACAAAACCTACTGGTATGGTGTTTAT
CACTGGATACAAGAGAAACATCTTATCTCAGTTGCTTTTTTACTCAAATG
CAAATGCTGTTTAGTTGTAGAGGGAGGGTTTGGGATTGCACGGGGAAAGT
NAAAGCGTGTACTTGATAAAAGTTACTTTTTCCGACGCAAATCACAAAAT
TTGCAATACCCTGTTTTTATGTAAAATCATTACTTCTTCTTTTTCTTTAC
ACTCCAGAAAATAACTGAAAATTGTGAAAACCTATTATCCAACCAAAAAC
CTACAAGTGACATCGAAGCGTATTTTCAAATTATTTTGAAGGGACAATTT
TATTCGTATTTGCTTTATTAATTTATTTCAGGTAAAAATCATATACTTGA
AGAAAAAAATTATCACTCCTACTCCTTACTTTCAGAAAAGAATTATAAAG
CGAAAAAAAGTAAAATAAATCACCAAAGATGCCATTTACATTTAAAGTTG
AAGATGTGAAATCAGCGGGACCAAAAAGTTACGGAAAGAACAGCTCACGG
ATATTTGAACCTCGACAAGGTCAATCATTAGAAGAAGCTTGGAAACAACA
TGGTATCATTGAAGCGATGTCAGAAGCTCCCAAAAATATTGTGGAAACTT
TCACCAAACAAAACCTACTGGTATGGTGTTTATCACTGGATACAAGAGAA
ACATCTTATCTCAGTTGCTTTTTTACTCAAATGCTGTTTAGTTGTAGAGG
GAGGGTTTAGAATTCACAAGAAAAGTGTTAGTTTAAAAGAAATGTTCTGT
CATTAAATTTTGAGCCCCCGTCAGACTTGCCGCTGTCGCTCCGTATTTTT
AAAGGTTACATGTTAAAAAGAGTATAGTTAACCTATACAACCCTATATAC
AGGATATGTGAAAATTCTCCAATTTCAGGTGAAATCAGTTCACGCAGCAT
TTTATGGTCATCATCCGTTGATTTTATCTCCTGATGTCATTTGGTTAACA
ATTGCTCAAGGTTTAGCCAATCATATCGATCAGGTATACTTCTTTCAATG
ACAAGTATTTGTTACAAGCTAGCCTTGGGCTAGCTGGTGGATTGCTAAAG
TTTCAAAAATAAAGAAAAAATTCAAAATGTCCATGACCAACTTTTTTTAT
GTTTCCTAGTCAAGTTGAGGGTGCTGATTCCGAATTTGAATTCCAAATCG
GCACCCTCAAATTGACTAGGAAACATATCAAAAAGTTGGTCATGGACATT
TCGGAAAAAAAAGTGAAACGTTTTTGGGTAACTGCGGCCACGGCCTATAT
GTTCCTTCTTCATATCAACGAAATGAAAGTAAGGACTGGAGTTTCGACCC
TCCGTATTATTTGGGTGATTGCTAGTGAAAACAGGCATCTGCATATATTC
GGACCAATTATCTTAAAGAAGTACGGTAATGAATTTTGAATTTCCTAACC
ATACCTTCTCAAAATTCATTATATAAATTCGTTGTCCGGAAATATACATT
CATCTCATGAAAGCTAAGGGGGTAGGCGACTTCTTACCATAATCTATTTA
GTCAAGCATGTTATCTTTCAACCTCTTGATTGTTTAGCTATCGTGATGAA
CACCGATCAAGAAATCATCTTTCTTTAGAATGCAAAGGAACTTCGCAAAA
AATTTGTCAATCACGAAGAAAAGAAAGAGATAGGGATTCTATTGAGACAG
ACTTTAGTACATATATAGGCCTTCATCAAATCAAAATCCGTTTGCATTCT
GTGAAAGGTATTACATATCTCAATGTAAACTTTTGATAATCTTCTTTTAG
AATGCAGAGGAACTCCGCAAGAAATTTGTCAATCACGAAGGAAAGAAAGG
GATAGAAATTGAAAGACCAAACTTTGTCAAAGGATCCAAAAACAACGACT
GGCCTGGTGTTTTTCCTGAATTCAGTGAAAAGATCGAAGCAAATACAGTC
GAGGGGACTGTCAAATTGATTGAAAGCGATTTCTCAACGACTGGTCCTGT
TGAAAAAATTGTAAGCTACTTGCTTATAAATTGTTTCTTCTTACCTCGAC
AAAGTTTAACATGCCCACACACAACGCTTTGCTCGATTTAGGATTCAAAC
GCTAAATATATAGGACGACAAATAGCTATTATCTCTCAAAACTAATACTT
TCCATTCCTTGATGTCTTCAATGCTATTTCTCCAATTTCGAGTAATTCTC
TCAACACCAGGTCTCACACATCACTTTGATGGATGCAGTCCAACATTATT
TCTCATACAGCATGTGCTGTGGTTGTGGCTTTCCGGAGATCACCCTCACC
GGTGAACCGGATGACTGGAAGAAAATCCGGTCGAAAGCTGCACTGTTGAA
ACAATACGGTCTTGAATGGTGGTTGAAAGCTTTGTTACCTACTTTGGATC
AGTTCGTGCTTGCTTCTGAAGGAAAACCTGACTTGAATTTTTGGAAATCA
CTTTGTAACATTAATGTAGGGACAAGTTTTCGTGTTTACGAGCCCGTCAC
TGGCTGGATTCAGGTAATTTTCTTTTCATCATGTGACCTCGCTCTCACTG
TAGTTTTGTTAGTCAAGTTTTTTAAGATTAAAAATGTTTGCTTAAAAATG
TGCAAATCTCGCTAAAAAATCAAAAAACCTTCCTTAAAACTCTTGAAGTG
ATTTATAGTAAAAACATGTGTAACAGTACACTCTAGGGAAGAGGTTGAAT
ATTTTTCACAATCAATTCACTTTCATTATCTTACTTCTTCGTTTTCCAGG
CTTTCTTTCTCTACCTCAATGCTGCAGGGTACGGTTTTGATGATTTCGAT
CGGTTTGCAGAAGCAAAAGATGGCGTCGCCAAGAAACAATTGCAGAAGAA
TGAATGTCTTGAACACTATATGGAAAGCTTCCAGCAGAAGGTTTGTATTT
TATGACTTTTGTACCATAAGTCTACTATTTTTCAGAGAAGGCACCAAATC
CTATTTCTACTGCACATTGGAAGACTTATACATGTTTTTTTTTTCTCATC
ATAACAAAGGTTGGCATAAAAGAATTTGAAGCTGATAAAAACAAGCCAAG
AGATAGGGAAGAATTTCGTTTCGCTGATCCACCCTCAGGGACCAAACGAG
GTATCAAATTAAAATTATTTCCACCCGCCCTTTCTTCCGCCCCTTTCGTT
TACAAAGACATGATGACCATGAAAAAACATTCAATGGCGTTTATGGGTGG
TTTAACCACCCTTGTTCAACACCCTGATGGTGCAATTGAGCCAAAAATGG
GATGGGCTGTCATGGATTCTGGCAAATGGGAACAGATTAAATAAATTAAA
AGACTCTTGAAACTGTTCAGTCACTTTTTGTAGTGTGTACTGATTCTTAA
AACCAATGAAAAAGAAATACTGAAGACCTTGCTTTCTTCTTTAAAATGAG
AATAGATTTATCATATTGTAATTTATGTAATTATAGGTATTTGATTTTTT
GTATAATTTTGTAATATTTTGTAACTTATTTTTCAATTATTGATTCCTAC
ACAACCTTTTGCACACGCAATGTAATGGTAGGAGAACTTAAGAAAGCTTA
TGTATTTTAAGACAATTTGCGAGCATTTCATTTTCCACAATGTATATAAT
GAGATATTGAAAGAGTTTAGTTTTACTGATTTATTGTTTGTAATTTAAAA
AGACTGGATTACTTGGCAAAAGTTAGTTTTTCCGACGCAAATCAGCAAAA
TTTGCAATACCCTTGTTATGTAAAATCATTACTTCTTCTTTTTGTTTACC
TTCCAGAAAATGACTGAAAATTGTGAAAACGTGTTATCCAACAAAAAATC
TACAAGAGACCTACAAGCGTATTTTCAACTTATTTTGAAGGGACGATTTT
ATTCGTATTCGTTTTATTAATTTATTTCAGGTAAAAATTCCTATACTTGA
AGAAAAAATTATCACTCCTACTCATTACTTTCAGAAAATAATTATAAAGC
GAAAAAAAGTAAAATAAATCACCAAAGATGCCATTTGCATTTAAAGTTGA
AGATCTAAAATCAGCGGGACCAAAAAGTTACGGAAAGAACCACTCATGGA
TGTTTGAACCTCAACAAGGTCAATCTTTAGAAGAAGCTTGGAAACAACAT
GGTATCATTGAAGCGATGTCAGAAGCTCCCAAAAATATTGTGGAAACTTT
CACCAAACAAAACCTACTGGTATGGTGTTTATCACTGGATACAAGAGAAA
CATCTTATCTCAGTTGCTTTTTTACTCAAATGAAAATGCTGTTTAGTTGT
AGAGGGAGGGTTTGGGATTGCACGGGGAAAGTGTTAGTTTAAAAGAAATG
TTCTCTGTCATTAAATTTTGAGCCCCCGTATGACTTGCCGCTGTCGCTCC
ATATTTTTTAAGGTTACATGTTAAAAAGAGTGTAGTTAACCAATACAAAC
CTATACACAGGATATGTGAAAATTCTCCATTTTCAGGTGAAATCAGTTCA
CGCAGCATTTTATGGTCATCATCCGTTGATTTTATCTCCTGATGTCATTT
GGTTAACAATTGCTCAAGGTTTAGCCAATCATTTAGTCATATCATGTCTT
GAACACTATATGGAAAGCTTCCAGCAGAAGGTTTGTGTCATATTGTCTGT
ATATATTTATCATAGTTGGCTCTATTATCTGTTAATTTAGTTTCTTTTAA
GTAGCAATGCTATAACATTAGTCAAAAGTGAAATAAAAAAGTGGCGCGAT
TTTTGCGTGTTTACTGTTATATTAAGCTGCACCTATCGATGCTGTTGTCG
CTTCATCTAAGTTCATCAACAATGGTTGATAGATGATTTTAGGATATCCG
AAAAACCAGAATTTTCTTGAGCCCATGAGGTTAGGATTTGTCATAATTTG
TTCTTAGGTTTCGGCTAAAGTCTCTTATTCTTGTTAAAATGTTCGCAGAA
AAAACGTGTGAATTTCTTTTCTACAGCTTGGGGTAAAAGAGTTTGAACAT
CATAAAAACAAATTCAAGCAGAAAGGACAACACTTTGCTTGGGCTGATAG
ACCTCCTTCTGGAACTGAGAGAGGTATCAAATTAGAATTATTTCCACCCG
CCCTTTCTTCCGCCCCTTTCGTTTACAAAGACACGGTGACAAATAAAAAA
CATTCAATGGCGTTTATGGGTGGGTTAACCACCCTTGTTCAACACCCTAG
TGGCGCCATCGAAGCAAAAATAGGATGGGCGGTCATCGATTCTGGCAAAT
GGGAACCAATCAAATTTTATAAAGAAACCTTGGTTTAGTCCAATGCATAC
ATATAGTGTGTTCATAAAAAAGGAAATGGAATTTGCTGTTAATTTTTAAC
TATTAATTTTTTTAAAGTTAATTTTTTTAAAGTTAATTTATTTTTATACT
AAATTATATTAGATAATAGTTTATGTAATTAATGATTTTTAAATACCCTA
ATTTTTAATTTTTTAAGATTTCTTTTTAAATCACTCAAGGTGAAATGTGT
AGCTAGCGGTAAAGATTGTAGAATGATCTCCGGGGGGGGGGCACTCGTTC
TGAAAACGATCACACGTTCGGCCCAAAAATTTACTTTCAAAATAGGACCT
TCACAGTGCAGAAAATAAGCTACGAAATTT

Coding sequence (CDS) from alignment at sc0000066:181766..191245-

>TCONS_00006290 ID=TCONS_00006290|Name=TCONS_00006290|organism=Clytia hemisphaerica|type=CDS|length=1257bp|location=Sequence derived from alignment at sc0000066:181766..191245- (Clytia hemisphaerica)
ATGCCATTTACATTCAAAGTTGAAGATGTGAAATCAGCGGGGCCAAAAAG
TTACGGAAAGAACCACTCACGGATGTTTGAACCTCAACAAGGTCAATCTT
TAGAAGAAGCTTGGAAACAACATGGTATCATTGAAGCGATGTCAGATGCT
CCCAAAAATGTTGTGGAAACTTTCACCAAACAAAACCTACTGGTGAAATC
AGTTCACGCAGCATTTTATGGTCATCATCCGTTGATTCTATCTCCTGATG
TCATTTGGTTAACAATCGCTCAAGGTTTAGCCAATCATATCGATCAGAAT
GCAGAAGAACTTCGCAAGAAATTTGTCAATCACGAAGGAAAAAAAGAAAT
AGAAATCGAAAGACCAACTTTTGTTAAAGGATCCAAAAACAACGACTGGC
CTGGTGTTTTTCCTGAATTTAGTGAAAAGATCGAAGCAAATACAGTTGAG
GGGACTGTCAAATTGATTGAAAGCGATTTCTCAACGACTGGTCCTGTTGA
AAAGATTGTCTCACACATCACTTTGATGGATGCAGTCCAACATTATTTCT
CATACAGCATGTGCTGTGGTTGTGGCTTTCCGGAGATCACCCTCACCGGT
GAACCGGATGACTGGAAGAAAATCCGGTCGAAAGCTGCACTGTTGAAACA
ATATGGTCTTGAATGGTGGTTGAAAGCTTTGTTACCTGCTTTGGATCAGT
TCGTGCTTGCTTCTGAAGGAAAACCTGACTTGAATTTTTGGAAATCACTT
TGTAACATTAATGTAGGGACAAGTTTTCGTGTTTACGAGCCCGTCACTGG
CTGGATTCAGGCTTTCTTTCTCTACCTCAATGCTGCAGGGTACGGTTTTG
ATGATTTCGATCGGTTTGCAGAAGCAAAAGATGGCGTCGCCAAGAAACAA
TTGCAGAAGAATGAATGTCTTGAACACTATATGGAAAGCTTCCAGCAGAA
GGTTGGCATAAAAGAATTTGAAGCTGATAAAAACAAGCCAAGAGATAGGG
AAGAATTTCGTTTCGCTGATCCACCCTCAGGGACCAAACGAGGTATCAAA
TTAGAATTATTTCCACCCGCCCTTTCTTCCGCCCCTTTCGTTTACAAAGA
CACGGTGACAAATAAAAAACATTCAATGGCGTTTATGGGTGGGTTAACCA
CCCTTGTTCAACACCCTAGTGGCGCCATCGAAGCAAAAATAGGATGGGCG
GTCATCGATTCTGGCAAATGGGAACCAATCAAATTTTATAAAGAAACCTT
GGTTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003593XLOC_003593Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006290-exon-sc0000066-1575043694:191015..191245TCONS_00006290-exon-sc0000066-1575043694:191015..191245Clytia hemisphaericaexon
TCONS_00006290-exon-sc0000066-1575043694:190476..190580TCONS_00006290-exon-sc0000066-1575043694:190476..190580Clytia hemisphaericaexon
TCONS_00006290-exon-sc0000066-1575043694:189873..190082TCONS_00006290-exon-sc0000066-1575043694:189873..190082Clytia hemisphaericaexon
TCONS_00006290-exon-sc0000066-1575043694:189401..189649TCONS_00006290-exon-sc0000066-1575043694:189401..189649Clytia hemisphaericaexon
TCONS_00006290-exon-sc0000066-1575043694:184833..184886TCONS_00006290-exon-sc0000066-1575043694:184833..184886Clytia hemisphaericaexon
TCONS_00006290-exon-sc0000066-1575043694:184456..184596TCONS_00006290-exon-sc0000066-1575043694:184456..184596Clytia hemisphaericaexon
TCONS_00006290-exon-sc0000066-1575043694:184246..184336TCONS_00006290-exon-sc0000066-1575043694:184246..184336Clytia hemisphaericaexon
TCONS_00006290-exon-sc0000066-1575043694:181766..182322TCONS_00006290-exon-sc0000066-1575043694:181766..182322Clytia hemisphaericaexon
TCONS_00006290-exon-sc0000066-1510915933:191015..191245TCONS_00006290-exon-sc0000066-1510915933:191015..191245Clytia hemisphaericaexon
TCONS_00006290-exon-sc0000066-1510915933:190476..190580TCONS_00006290-exon-sc0000066-1510915933:190476..190580Clytia hemisphaericaexon
TCONS_00006290-exon-sc0000066-1510915933:189873..190082TCONS_00006290-exon-sc0000066-1510915933:189873..190082Clytia hemisphaericaexon
TCONS_00006290-exon-sc0000066-1510915933:189401..189649TCONS_00006290-exon-sc0000066-1510915933:189401..189649Clytia hemisphaericaexon
TCONS_00006290-exon-sc0000066-1510915933:184833..184886TCONS_00006290-exon-sc0000066-1510915933:184833..184886Clytia hemisphaericaexon
TCONS_00006290-exon-sc0000066-1510915933:184456..184596TCONS_00006290-exon-sc0000066-1510915933:184456..184596Clytia hemisphaericaexon
TCONS_00006290-exon-sc0000066-1510915933:184246..184336TCONS_00006290-exon-sc0000066-1510915933:184246..184336Clytia hemisphaericaexon
TCONS_00006290-exon-sc0000066-1510915933:181766..182322TCONS_00006290-exon-sc0000066-1510915933:181766..182322Clytia hemisphaericaexon
TCONS_00006290-exon-sc0000066-1491911889:191015..191245TCONS_00006290-exon-sc0000066-1491911889:191015..191245Clytia hemisphaericaexon
TCONS_00006290-exon-sc0000066-1491911889:190476..190580TCONS_00006290-exon-sc0000066-1491911889:190476..190580Clytia hemisphaericaexon
TCONS_00006290-exon-sc0000066-1491911889:189873..190082TCONS_00006290-exon-sc0000066-1491911889:189873..190082Clytia hemisphaericaexon
TCONS_00006290-exon-sc0000066-1491911889:189401..189649TCONS_00006290-exon-sc0000066-1491911889:189401..189649Clytia hemisphaericaexon
TCONS_00006290-exon-sc0000066-1491911889:184833..184886TCONS_00006290-exon-sc0000066-1491911889:184833..184886Clytia hemisphaericaexon
TCONS_00006290-exon-sc0000066-1491911889:184456..184596TCONS_00006290-exon-sc0000066-1491911889:184456..184596Clytia hemisphaericaexon
TCONS_00006290-exon-sc0000066-1491911889:184246..184336TCONS_00006290-exon-sc0000066-1491911889:184246..184336Clytia hemisphaericaexon
TCONS_00006290-exon-sc0000066-1491911889:181766..182322TCONS_00006290-exon-sc0000066-1491911889:181766..182322Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006290-proteinTCONS_00006290-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000066supercontigsc0000066:181766..191245 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.629547	0	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR025533DUF4419
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006290 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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