TCONS_00006402 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006402
Unique NameTCONS_00006402
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1958

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006402 ID=TCONS_00006402|Name=TCONS_00006402|organism=Clytia hemisphaerica|type=transcript|length=1958bp
CACAACCAAAATATACAAAAGAGTTTCGTAGGGAAAACTCCCTTATCGCT
TACAAAATGGTACAACTTGGTCACGTGAACACGCCTGTCAGTAACTCGAC
AGGACCTTGGAAAGACGGAAGGTGTATGATTGGGAAAGATGGCAGACCAG
AGTTTTACACAAAACAAGGCCATCAACCTTGTGTGTTGAACGATGGATCA
CATAATTGTCCATTGACGGAAATGAAGACCATGAATACTGAGTACCCTCA
CTGTTTCATCTGTTGTTGGAGCAAGATAGCAGAAACAAAATGTCCAACGT
TACCACAGACGACCACGCCACCCGCCTTAAATGTCACGAAGCAGGAGACG
AGAGGAGAAGAGCAAACGTCTCCTGAACAGACTGCACCTGGATGTAAAAA
AGACGTCCTCTTCACAGCTGGTGTATCATTTCTGATACTCTTCTTATGTT
CACTTGCCCAATTCAAATACCATCAGAATCAACGTCTCTCTTTAGTCAAA
GAGAATGATAATTTGAAAGAAACATTGACAAATATAATTCCTGaaaatcc
CGTCCAAGACCATTTTCTTGGAGAAAACGAGCCAATCAGGAATGACGTAG
CAGCCGGCGATTATGACGTCAACCAAGGCCTGACGGACGAGCATGTTGAC
GTACCTTCAGGGACGAAGAAGTCGTTTCATTTTGATACGAATGATGTTGA
AGAAGGAGAAAATCAAAACGATGAAGGAATCGGCTCCAGTGAAGCTTCAA
GTAGAGAATCCATTTGCTGACAAATGAAATGGACGAAAAATGAAACACAA
ATATGAAAGCAAAAGAACGAAAGTGAAATGAATTTCTTATGGTTGCGGCA
TCAATCAAATCTCCAACTAAGACCtagtccaggagctggagctcaactac
tttttgcctttactaattctgatgggggaaaaagtagagtcctatcgcag
cgccatcattcaaatcagaaagcgaagatagtatacggcagactTTCTGA
CTAACTAAGACCGGAAAGATGACTACCTGCATTACATTCTTCAACGCCCT
TCAGAAGCACGCCCGGGCAAATATACAAAgacattcattcattcattcaa
gtTAGTTTTGGGAAATGTAGCATTGTGAATTCAAGAACACTGTATTATAA
TCGAATTTCAACGAGAtaagtatttcaatttttttaccatATGACTAAAT
TTTATTAGAGACAAGGTTGGTCCCAGGAAgacttgatgattttttttggg
aaaGTTTTCGAAAGATCCTAGAGAGTGGTAAATTTAAACCAAATTTAACT
TTGGGACTTCTTGTTCATAACCCCTACCCACTACTACccaactttccttt
ttttttggcATCAAACTTTCCTGACTCCTGACTAGCAAAAGTTAAGTAtg
tatattttctattttttaacaaattttatttaattagtttttttctatcc
aaataataattttattaaatttctgACAGGTTAcattttaacacccctgt
ctcagtgatcaGGTTGGAATGGATCGTGGAGGTGGATTTTTTATGGAAGA
GGATCCCACCAAGTCTGTGATAAAGGGTTGTTCTCGGACACACCTCCTCT
TCTCCCAGTAATTTCCAAAGGGACAATCCCCTTTGTACCTCCCCCTCTAA
CGTTCGTGATGACTCATTCTCCTCCCATTAGTTTTGAATTATGTAGTTTG
TTTATAAGAAGCAATAATGTGTTAATGAATTATGTTTCTTATAAATTAAA
ACTTATTAAAGAAAGGGGGTTCCCCTGTGATGTTATGATGGTTTTTTTTT
ACTCTCTCGTTATGATATAGAGAAATAAGAGTATAATCAATCATTTGAGA
CGTTGAACTTTAGATAGTACATTGACATGTTGTTAAATTTTCTATTCaat
atttgataatattttgatataatttttgaaaaagattaaaATATGAAAGA
TAATCACG
Run BLAST on NCBI

protein sequence of TCONS_00006402-protein

>TCONS_00006402-protein ID=TCONS_00006402-protein|Name=TCONS_00006402-protein|organism=Clytia hemisphaerica|type=polypeptide|length=255bp
QPKYTKEFRRENSLIAYKMVQLGHVNTPVSNSTGPWKDGRCMIGKDGRPE
FYTKQGHQPCVLNDGSHNCPLTEMKTMNTEYPHCFICCWSKIAETKCPTL
PQTTTPPALNVTKQETRGEEQTSPEQTAPGCKKDVLFTAGVSFLILFLCS
LAQFKYHQNQRLSLVKENDNLKETLTNIIPENPVQDHFLGENEPIRNDVA
AGDYDVNQGLTDEHVDVPSGTKKSFHFDTNDVEEGENQNDEGIGSSEASS
RESIC
Run BLAST on NCBI

transcript from alignment at sc0000067:224878..231437+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006402 ID=TCONS_00006402|Name=TCONS_00006402|organism=Clytia hemisphaerica|type=transcript|length=6560bp|location=Sequence derived from alignment at sc0000067:224878..231437+ (Clytia hemisphaerica)
CACAACCAAAATATACAAAAGAGTTTCGTAGGGAAAACTCCCTTATCGCT
TACAAAATGGTACAACTTGGTCACGTGAACACGCCTGTCAGTAACTCGGT
GAGAATTATTTAACGAGATCAAAACAGTACTCAAACCATGAAAAAAGTCT
TGTTTTTCAGAAACGAGGGcgaattttattgtttactgCTGAAGTATTCA
TTGCGGCTTCTCAAAGCCTTAGTCTCTTTCCTTTAGAATAATTTTGATAA
TAAATCAGTTGTGGCTTGGATGGGATAATCCGGGAAAAGGAGAAAATTCT
AATATAGAAAGCTGCTAATCTGTTATGGGGGCGATCAGTTTCAATCGGAT
GTTATAAGCCAAATACTAAAATGAATTGACCTCTATGTAAAATTTAATAt
tgcatacacgctttttttataagaatggtgtaaatccatttcatcatgga
tattcttagcctggatatccagaccgtaaactatttcaccgtctagtttt
tttataatcttgtctcaggtttacggtctggttcaaGTAACTCGTCTACA
GGGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNtatcagacttttttagttgcacca
gactctataattttagaaactttgtatgttgaggtaagagtgtttttttc
taaaattttgagtctggatacccaggctaggatattcttaacttttttgg
gaaaatcatcctaaaatattcttaccgcattcttaggttaggatcctaat
tcagactaggtTTAACTTTTAGTACATAcgcctcaagcataaaatggcat
ttttgtgaaaggagtgagccttacttgagggtaattgacaatttatgaTT
GGAAACGCTCTAAAAATTCTTAGCTTGTGTAGCAGaattccatgatgatg
atattcttagcattattcttaattttttggccattttcatcatggtcatt
cttataaagtgtattcttataataaaaaagcgtgtagttgtAATATCTTT
GGAGAAGTCGATGTCATCCCTGAAGCTTTTGCCGACGCGATAATCTctca
aaattatttgtttttggtttAGCGACGAAAGTAGAAAATATTCTTTCGTG
TGCTCTAAGCTGCGAAGCTCGATTTTTCATCAGCCGATCAGagagaagaa
aaacattcgatttttgtgTTTGCTTTTCTTGTGTGTAAAAATATATTCGA
TATTGTGCTACGCGCCACTTTTCAATGGTTCAAAGCGTTAACGAGGCCCT
CAAATGTTCACTCTCGATCAGAGAGATGCATTCGCGGGGCATTCGAGACT
AGCGTCATAATCACGCTAGGGAGTCGGGGATTCGTAAGCAGTGGGTGTTA
AATAGGAATTATAAAAAAGCAACATATCCTCTATTCCTGTATTTCAACCT
GTCATTAAATTaagcagtatagacctaactcttcatacaaaaattacggg
aaacgcatatttggactttgaaccctatgctgcactcaagcacttgagcc
aaaatcccgcaaaggcggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNgatgtttgtaagtgcactttatagttttgat
tcccattgaagaatcatattctggttttcatgttattagatgctgtttta
gagctttaggtctacactgttaAGATAGGTGTATGTTTGAAAATTCCTGC
TGCATAAGCATacgtatttttttatttaagaacaAGCATAAGGCATGGAT
GTGATGGGCAAAGTATTTTAATCAAGCCTTTGTGAACTCTAAAActttta
ggaaattgcacaaaacttgtgaaataagaacatctttaggcttcaaaatg
ttcaaactcaaaaagtaaagaacatGAGAAATTAAGAACGTCCGAAGGCT
ATTTTTGACGCGGTGCTTATAACAATTTATGATTATGTATTATTTCTATT
GTGTGCTGTCGTTTTTTGGAATTTCCCTTTTAATGTCAAGGGTTATTTAC
CATCGATCTtttatgttttcaaaaaatgaaaggtGAACGAGACACTCATT
TCTAAAATCGCTGCCGAGAGGAAAGGAGCTTGAAAGCATCTTtctttaac
aatatttttactttaatcAAGAAACTTATATCACAAATTAAGAGGATTTG
TAGATTATAATCATGTCTTTCGGCTGCGGTTGCGACACAAGAGCGCCCTT
GGATAAGTCCATAGTGAACacttttttcctgatttttgtcttGTTTACTT
GTTTGGTCGCAGCAAAACCGTCTGGTGTAATCATAAACAATTCTAATAAG
CATAGTACGAAACAGACAGGACCTTGGAAAGACGGAAGGTGTATGATTGG
GAAAGATGGCAGACCAGAGTTTTACACAAAACAAGGCCATCAACCTTGTG
TGTTGAACGATGGATCACATAATTGTCCATTGACGGAAATGAAGACCATG
AATACTGAGTACCCTCACTGTTTCATCTGTTGTTGGAGCAAGATAGCAGG
TAAGGCCGTGAGCAATCACTTTGATGTCTTTGTATTTCATTACAGTCTAG
TGTTATCTATATGACCGCCGACATGTTACGTATATCTGTACCTTTTTCAA
TCTAAATCAAAATTAGGTTACCTTGGAAATTGATTGAATTTCTATGTGTA
TTAACTTTACCATCCCTTCTTTATCTTAAAAGAGCTTTTCTTTGTATGTT
GATAATGCTTCGAGGAAATGGTTTTCTAGTTGTTCACTTAAACCAGAGac
ctgttttgtttgttttgaagagAGTTGATTTTGTAAGTTGATGATGTTTC
TCGTGTTACACTTAcgccaaaagttaaaaaataaggAGATAACCCCGATC
GAGACCCCATAGCACTTAAACTATTCTttgaaaaaacctttgaaaataaa
acctgTTTTTTTACCCCATAAAGTCGGTGGGGATGTTTTTAcagatttat
tttcaattttgaagaaatagTTACgatcccaggggggggggggggttttt
ttttaaaatttaaaaaaagggggggggggtttttttaatttttttttaga
tttttgaaaaaagggggggggggtttttttaatttttttttttaaatttt
ttttttaattttgaaaaaaattgggcggccccggggggggggggggggtg
gggtaCTCAAAGTAATTAATCAGTTTTGGgcaacattttggaaaaaattt
accttttttatCTTAATATGGACGagagttttcaagaaaatgcaagGGTC
GATTTTATGTCCAATGCTCACCTGCTTCTTAACTGCATTATTTTATTTCT
GCTGGCTAAAAAATTCACCGGTCACTGAGAGAGGACTTTATTTTCTAATC
TTATATCTCGTAATGTAATTTCACAAATATTTTTCCTTAGAAACAAAATG
TCCAACGTTACCACAGACGACCACGCCACCCGCCTTAAATGTCACGAAGC
AGGAGACGAGAGGAGAAGAGCAAACGTCTCCTGAACAGACTGCACCTGGA
TGTAAAAAAGACGTCCTCTTCACAGCTGGTGTATCATTTCTGATACTCTT
CTTATGTTCACTTGCCCAATTCAAATACCATCAGAATCAACGTCTCTCTT
TAGTCAAAGAGAATGATAATTTGAAAGAAACATTGACAAATATAATTCCT
GGTAAGATTCAAAGTACAATAATTACAGTACAACCTCTCCAAGTGTTCCG
ACCGAGAAAAAGGTTACCAATtactgtaaatatttttcattttagaaaat
ccCGTCCAAGACCATTTTCTTGGAGAAAACGAGCCAATCAGGAATGACGT
AGCAGCCGGCGATTATGACGTCAACCAAGGCCTGACGGACGAGCATGTTG
ACGTACCTTCAGGGACGAAGAAGTCGTTTCATTTTGATACGAATGATGTT
GAAGAAGGAGAAAATCAAAACGATGAAGGAATCGGCTCCAGTGAAGCTTC
AAGTAGAGAATCCATTTGCTGACAAATGAAATGGACGAAAAATGAAACAC
AAATATGAAAGCAAAAGAACGAAAGTGAAATGAATTTCTTATGGTTGCGG
CATCAATCAAATCTCCAACTAAGACCtagtccaggagctggagctcaact
actttttgcctttactaattctgatgggggaaaaagtagagtcctatcgc
agcgccatcattcaaatcagaaagcgaagatagtatacggcagactTTCT
GACTAACTAAGACCGGAAAGATGACTACCTGCATTACATTCTTCAACGCC
CTTCAGAAGCACGCCCGGGCAAATATACAAAgacattcattcattcattc
aagtTAGTTTTGGGAAATGTAGCATTGTGAATTCAAGAACACTGTATTAT
AATCGAATTTCAACGAGAtaagtatttcaatttttttaccatATGACTAA
ATTTTATTAGAGACAAGGTTGGTCCCAGGAAgacttgatgattttttttg
ggaaaGTTTTCGAAAGATCCTAGAGAGTGGTAAATTTAAACCAAATTTAA
CTTTGGGACTTCTTGTTCATAACCCCTACCCACTACTACccaactttcct
ttttttttggcATCAAACTTTCCTGACTCCTGACTAGCAAAAGTTAAGTA
tgtatattttctattttttaacaaattttatttaattagtttttttctat
ccaaataataattttattaaatttctgACAGGTTAcattttaacacccct
gtctcagtgatcaGGTTGGAATGGATCGTGGAGGTGGATTTTTTATGGAA
GAGGATCCCACCAAGTCTGTGATAAAGGGTTGTTCTCGGACACACCTCCT
CTTCTCCCAGTAATTTCCAAAGGGACAATCCCCTTTGTACCTCCCCCTCT
AACGTTCGTGATGACTCATTCTCCTCCCATTAGTTTTGAATTATGTAGTT
TGTTTATAAGAAGCAATAATGTGTTAATGAATTATGTTTCTTATAAATTA
AAACTTATTAAAGAAAGGGGGTTCCCCTGTGATGTTATGATGGTTTTTTT
TTACTCTCTCGTTATGATATAGAGAAATAAGAGTATAATCAATCATTTGA
GACGTTGAACTTTAGATAGTACATTGACATGTTGTTAAATTTTCTATTCa
atatttgataatattttgatataatttttgaaaaagattaaaATATGAAA
GATAATCACG

Coding sequence (CDS) from alignment at sc0000067:224878..231437+

>TCONS_00006402 ID=TCONS_00006402|Name=TCONS_00006402|organism=Clytia hemisphaerica|type=CDS|length=3072bp|location=Sequence derived from alignment at sc0000067:224878..231437+ (Clytia hemisphaerica)
CAACCAAAATATACAAAAGAGTTTCGTAGGGAAAACTCCCTTATCGCTTA
CAAAATGGTACAACTTGGTCACGTGAACACGCCTGTCAGTAACTCGACAG
GACCTTGGAAAGACGGAAGGTGTATGATTGGGAAAGATGGCAGACCAGAG
TTTTACACAAAACAAGGCCATCAACCTTGTGTGTTGAACGATGGATCACA
TAATTGTCCATTGACGGAAATGAAGACCATGAATACTGAGTACCCTCACT
GTTTCATCTGTTGTTGGAGCAAGATAGCAGAAACAAAATGTCCAACGTTA
CCACAGACGACCACGCCACCCGCCTTAAATGTCACGAAGCAGGAGACGAG
AGGAGAAGAGCAAACGTCTCCTGAACAGACTGCACCTGGATGTAAAAAAG
ACGTCCTCTTCACAGCTGGTGTATCATTTCTGATACTCTTCTTATGTTCA
CTTGCCCAATTCAAATACCATCAGAATCAACGTCTCTCTTTAGTCAAAGA
GAATGATAATTTGAAAGAAACATTGACAAATATAATTCCTGaaaatccCG
TCCAAGACCATTTTCTTGGAGAAAACGAGCCAATCAGGAATGACGTAGCA
GCCGGCGATTATGACGTCAACCAAGGCCTGACGGACGAGCATGTTGACGT
ACCTTCAGGGACGAAGAAGTCGTTTCATTTTGATACGAATGATGTTGAAG
AAGGAGAAAATCAAAACGATGAAGGAATCGGCTCCAGTGAAGCTTCAAGT
AGAGAATCCATTTGCTGACAACCAAAATATACAAAAGAGTTTCGTAGGGA
AAACTCCCTTATCGCTTACAAAATGGTACAACTTGGTCACGTGAACACGC
CTGTCAGTAACTCGACAGGACCTTGGAAAGACGGAAGGTGTATGATTGGG
AAAGATGGCAGACCAGAGTTTTACACAAAACAAGGCCATCAACCTTGTGT
GTTGAACGATGGATCACATAATTGTCCATTGACGGAAATGAAGACCATGA
ATACTGAGTACCCTCACTGTTTCATCTGTTGTTGGAGCAAGATAGCAGAA
ACAAAATGTCCAACGTTACCACAGACGACCACGCCACCCGCCTTAAATGT
CACGAAGCAGGAGACGAGAGGAGAAGAGCAAACGTCTCCTGAACAGACTG
CACCTGGATGTAAAAAAGACGTCCTCTTCACAGCTGGTGTATCATTTCTG
ATACTCTTCTTATGTTCACTTGCCCAATTCAAATACCATCAGAATCAACG
TCTCTCTTTAGTCAAAGAGAATGATAATTTGAAAGAAACATTGACAAATA
TAATTCCTGaaaatccCGTCCAAGACCATTTTCTTGGAGAAAACGAGCCA
ATCAGGAATGACGTAGCAGCCGGCGATTATGACGTCAACCAAGGCCTGAC
GGACGAGCATGTTGACGTACCTTCAGGGACGAAGAAGTCGTTTCATTTTG
ATACGAATGATGTTGAAGAAGGAGAAAATCAAAACGATGAAGGAATCGGC
TCCAGTGAAGCTTCAAGTAGAGAATCCATTTGCTGACAACCAAAATATAC
AAAAGAGTTTCGTAGGGAAAACTCCCTTATCGCTTACAAAATGGTACAAC
TTGGTCACGTGAACACGCCTGTCAGTAACTCGACAGGACCTTGGAAAGAC
GGAAGGTGTATGATTGGGAAAGATGGCAGACCAGAGTTTTACACAAAACA
AGGCCATCAACCTTGTGTGTTGAACGATGGATCACATAATTGTCCATTGA
CGGAAATGAAGACCATGAATACTGAGTACCCTCACTGTTTCATCTGTTGT
TGGAGCAAGATAGCAGAAACAAAATGTCCAACGTTACCACAGACGACCAC
GCCACCCGCCTTAAATGTCACGAAGCAGGAGACGAGAGGAGAAGAGCAAA
CGTCTCCTGAACAGACTGCACCTGGATGTAAAAAAGACGTCCTCTTCACA
GCTGGTGTATCATTTCTGATACTCTTCTTATGTTCACTTGCCCAATTCAA
ATACCATCAGAATCAACGTCTCTCTTTAGTCAAAGAGAATGATAATTTGA
AAGAAACATTGACAAATATAATTCCTGaaaatccCGTCCAAGACCATTTT
CTTGGAGAAAACGAGCCAATCAGGAATGACGTAGCAGCCGGCGATTATGA
CGTCAACCAAGGCCTGACGGACGAGCATGTTGACGTACCTTCAGGGACGA
AGAAGTCGTTTCATTTTGATACGAATGATGTTGAAGAAGGAGAAAATCAA
AACGATGAAGGAATCGGCTCCAGTGAAGCTTCAAGTAGAGAATCCATTTG
CTGACAACCAAAATATACAAAAGAGTTTCGTAGGGAAAACTCCCTTATCG
CTTACAAAATGGTACAACTTGGTCACGTGAACACGCCTGTCAGTAACTCG
ACAGGACCTTGGAAAGACGGAAGGTGTATGATTGGGAAAGATGGCAGACC
AGAGTTTTACACAAAACAAGGCCATCAACCTTGTGTGTTGAACGATGGAT
CACATAATTGTCCATTGACGGAAATGAAGACCATGAATACTGAGTACCCT
CACTGTTTCATCTGTTGTTGGAGCAAGATAGCAGAAACAAAATGTCCAAC
GTTACCACAGACGACCACGCCACCCGCCTTAAATGTCACGAAGCAGGAGA
CGAGAGGAGAAGAGCAAACGTCTCCTGAACAGACTGCACCTGGATGTAAA
AAAGACGTCCTCTTCACAGCTGGTGTATCATTTCTGATACTCTTCTTATG
TTCACTTGCCCAATTCAAATACCATCAGAATCAACGTCTCTCTTTAGTCA
AAGAGAATGATAATTTGAAAGAAACATTGACAAATATAATTCCTGaaaat
ccCGTCCAAGACCATTTTCTTGGAGAAAACGAGCCAATCAGGAATGACGT
AGCAGCCGGCGATTATGACGTCAACCAAGGCCTGACGGACGAGCATGTTG
ACGTACCTTCAGGGACGAAGAAGTCGTTTCATTTTGATACGAATGATGTT
GAAGAAGGAGAAAATCAAAACGATGAAGGAATCGGCTCCAGTGAAGCTTC
AAGTAGAGAATCCATTTGCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003656XLOC_003656Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006402-exon-sc0000067-1491911889:224878..224975TCONS_00006402-exon-sc0000067-1491911889:224878..224975Clytia hemisphaericaexon
TCONS_00006402-exon-sc0000067-1510915933:224878..224975TCONS_00006402-exon-sc0000067-1510915933:224878..224975Clytia hemisphaericaexon
TCONS_00006402-exon-sc0000067-1575043694:224878..224975TCONS_00006402-exon-sc0000067-1575043694:224878..224975Clytia hemisphaericaexon
TCONS_00006402-exon-sc0000067-1491911889:228593..228776TCONS_00006402-exon-sc0000067-1491911889:228593..228776Clytia hemisphaericaexon
TCONS_00006402-exon-sc0000067-1510915933:228593..228776TCONS_00006402-exon-sc0000067-1510915933:228593..228776Clytia hemisphaericaexon
TCONS_00006402-exon-sc0000067-1575043694:228593..228776TCONS_00006402-exon-sc0000067-1575043694:228593..228776Clytia hemisphaericaexon
TCONS_00006402-exon-sc0000067-1491911889:229668..229928TCONS_00006402-exon-sc0000067-1491911889:229668..229928Clytia hemisphaericaexon
TCONS_00006402-exon-sc0000067-1510915933:229668..229928TCONS_00006402-exon-sc0000067-1510915933:229668..229928Clytia hemisphaericaexon
TCONS_00006402-exon-sc0000067-1575043694:229668..229928TCONS_00006402-exon-sc0000067-1575043694:229668..229928Clytia hemisphaericaexon
TCONS_00006402-exon-sc0000067-1491911889:230023..231437TCONS_00006402-exon-sc0000067-1491911889:230023..231437Clytia hemisphaericaexon
TCONS_00006402-exon-sc0000067-1510915933:230023..231437TCONS_00006402-exon-sc0000067-1510915933:230023..231437Clytia hemisphaericaexon
TCONS_00006402-exon-sc0000067-1575043694:230023..231437TCONS_00006402-exon-sc0000067-1575043694:230023..231437Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006402-proteinTCONS_00006402-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000067supercontigsc0000067:224878..231437 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.37908	0.295425	0.454945	0.378062	5.91829	5.33942	11.7213	14.4151	5.92372	18.8813	9.48635	3.0556	16.7676	16.1643	10.2649	12.7301	5.87923	4.40207	11.4282	20.4005	2.0353	1.24575	2.77165	3.75611	21.7832	20.3479	10.662	18.5526	11.186	7.23733
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006402 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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