TCONS_00006408 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006408
Unique NameTCONS_00006408
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3786

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006408 ID=TCONS_00006408|Name=TCONS_00006408|organism=Clytia hemisphaerica|type=transcript|length=3786bp
CCCATTCCCACTGCGTGTGGTTCTTTGGTAGTTGGCCTGGTGTATTGTTA
GTGTATTGTCTCTTTTTAGAAGGAAAAAAATGCTCATCTTACCATTTCCA
ATGACAGCTAAATAAACATAGACAACCCAATACCAACCATGAAAACTTTG
CAATTCATAAAAATAATTCCATAACAACTGACCAGCGCACACTACCCAAA
GCAGAAGAGCGAAAAGATTATATCGTTTGACAAGCTTCGCGCAATGTACC
CTTTCAGGACCCAGTTCAATCTCCAGCATTTTACTGTAATTGCCTTTTCG
GTAATACCACTTAGTGCAGAAGAAAGCTACAGCAAACGTTGCACTAAAAA
TCACACCATTGACAGActttttccaataaaatttaTTGTCGTTTTCAATG
TTATAGAAGTAAATGATAGCGGTAACGAGGAGAATCAACATAACGTATCC
AAACCTATTGTACATCCTCATCAGAAGACTTGCGTTGATCGGTTGCCATA
GTGCTAAGCCACGAAGCATCAATCGACAAGGACGTATTGTGTTTATTTAC
GCGTCAGTTTGTTATTGTCGTATCTTACTGATACCCAAACAAAAACATCT
CAAATTCCATGCTTGCTTTTCAAGGCTCTTTTGTTTGCGATGTGAGTGAG
ATGTGATTTACTCTTTCAAAGAATTGCGTTCAGAATTTTGAACTGTGTAA
TGGATGTTGCATCTCCAACTCATGCGCTACGACCCTGTCAATTGATGTTA
CGTTGTCTAGCACTTTGGCAACCCAGCAATGCGAAACCACTCGTGAAGCA
TTTAAACAAGTTTGGTTTTGTTATGTTGCTTGCTCTTGTTGGAGGCATCA
TTTACATCTTCTATGGCGGTTCTTCAAAGTGGGAAGGATCTGTCAATGGG
ATTTTGTTCAGCGCTATTTTCACCGTTGCTTTCTTGTGCACCAAATGGCA
TTACAGAAAGGGGAACTACAGTTGGTTAGTTGAAAATGAGCTTCAAAGCG
AACGCAACTATTCCGAACTCGTCCGAAGATACAATATTCTTGCGTTCGTA
CTATGGGCTGTGTGTTCAGGCCAGTTGGTATCCTTCTTCTACTCGACATT
CAAAATCGAATATCATTGGAAATGGATTATTTATGTGTATATAGCAGTCA
TTGGAAATGgTTGGCGTATATGCTGGTTAATTCTTTACGCGTACATTTGC
CACGTTCACTGGAGATTGATTCAATCCATTCGCGAAAAATTTCGAAGATA
TCGAAATGAACCGATTGAAGCAGAACAAATCGAGGATTTGATGCAACGTT
TCAATGTCCTCAAAAAGAAGTTGAACAAATCGGAGAGAGCTTTACATGGA
ATCATTTCTTTATCCGTTGCGATTCATGTTGTTGATATGACGGCATATag
ttttgctttcttttttgaAGCCTATAAAAATGCGTTGTTAGTAGTGTATC
TGCTGGAGATGGTATTCATTAGCTTGTTTATCAAGctgATACCAGCAGCC
ATCGTGAATTCCTCACTGAGAAAACTGATGATTTTAGTTGGAGATATGTG
TTCTCCTTTGAGAGGAGAGATACAAGATCAAATGATGTTATATCATCAAC
ATATTCACATCACTGAACAAGATATATGGGTTATCGAATATTGGGTGTCA
AAATCACCGCTCGGTTGACCGGCTATTTACTCACAACGCTCGTTTCTGTG
CTCCTGGCTGTAATTCATTTCACTCGTAAGTGGTAAAGATGGATTTGATA
GTTCTGGTAAATGCAATGCTGTTGAAGAAGATTCTTGTGAATAAGATGCT
GGCAGTGATGAACGAGAATAAGGATGTGATGGTGGAGATTGTTGGAATCA
CCGGTATCAATGGAATCATTGGAATTGATCAATAgtgcaaatgatggaat
cagaATCAGAATCCACAAGAATCAATGATATTTCTATTTTGCAACCATCA
GGGCcaccatttttaatttttttttagttttgttgtCGATTAACtagcaa
ttttctttaaaacacttagaaaaaaatgaccgtggcatttaaagagttaa
aaaattttggtgaatcagctttgtcaatttttaatactcaaatacaATAT
ATCCGTGGCATCTCCACCAACACCTCCATTTCTACAGCAAAAGGAAACTA
TGGTTAATTCCCTGTGGTATGCAAAGGTTCTTTCCCTTTGTTTACATCGG
CTTCAATGATTTCTCACTCAAGCGGTTGGGGGTTTCCTTCTATTTCTCAA
CCTGCCCCTACCCTATAAACCTGTTTTCACAGGGGTTTtccctttatatt
ttttttcacttttctagCATGTATTTAATATTTAGCCGAAATTAACCGGT
TTTTCATGAATTATACTCTTTTATCTAATTGAGAGTTTCTTGGttcaaaa
aaacacaaaaacttCCTTTCCCACTCTcagttttagggaaaaaatgAGAC
GAACATGTGTTTTCCCTGGGGTTGCTCGAACGAGTTACCCAGTTAGCAAG
GTTTCTTTCTTCCCTTTTTCCTGTTCTTAAAACTTTCCCTTTGTCTCAGC
AGATACAAAAGTGGCGATAGTTCAACACAATTTTATCTTGAAATCACTCT
ATTTCTAGCCACCATAGAGTTCAGACATCTCTCGAAGCATGTTGCtgatt
attttatttctttttgcttCAATTGCGCCTGACTTAGTTCATCTTTTTGG
AGATGATTCTTCTTCGAAACCTCTCACGGGTACCATAACATGGTATAATG
GCTTGTGTCAGGAAGTGGACGGCCGGAAAAGGTTTTATGTGGAGAAAAAG
GGTTATGAATACTGCGATGGACTCTGCCCCTTGGATCGATTGCCACCGTA
TGGTATAGAGTTTTCATTTTGCTATTTCTGCTGCTGGGCAAACAAAACAG
tggaATTGTTAcatgaagaaaaacattttcccgATCAACTGGCAGCAAGT
GAAGAGAGAGGCGACAAATATCAATCATGGTTCCACATTGCATTTGCGTT
GCTATGCACCTTTATCCTTATCAACATCGTTTTCATTGTGGCAATTAATG
TCAATAAATACCTGAATAGGAAGAACAGAGCGAACATACAACCTGATGAG
TTGGGAGAGCAAACACGCCCGAAGAACCGCCCAAATGGAATCAGCAATGC
CGCGAATTTTGACGTAGTAATCTCTCAAAGAGAAGATCAGCATGAAGTTG
CATCAAACACACCTTTGACTGACCGTGCCAGCGGAAGCATTCCGTTCGAA
GGTCATGGTGGAATCAACATTAACAAGACTTTCAGTTCTTCTCTGGCTTC
ATCACTGGATAGTGAGCAAGATGACGATTCGTTTCCAACAACTGGCCAAC
GACACCAACCTCCGTCCCCAGTAACCTATGATGTTTCTGAAAGAGGTCAA
CCAGCTTTTACACCTTCACTCACTACGGGCGCCGCCACAAACCTACATAA
TGGCAATTCCGCATGCTTGAGCCCACCCATGATGTCTGCTATTCTTGAAG
ATATCCCATTGGGCCAAAGAAGTGAGCAATCTGAGGAACGCCGGATGCGA
GAAGCACCCGAGAGTAACGTAGCTTCTGATAcatgttaaaatatttttat
ttaactatattttacaactttatcTATATGgatttaaacacccctgtctc
gcagccccggtgaaacCATGGTGGAACTCTTTTCcacaatagcgctccgc
aatgcatacgtcataattattacttttcactttttttgacatttgtacga
gttgcaatcccacaattcaacgcggctcaattaaag
Run BLAST on NCBI

protein sequence of TCONS_00006408-protein

>TCONS_00006408-protein ID=TCONS_00006408-protein|Name=TCONS_00006408-protein|organism=Clytia hemisphaerica|type=polypeptide|length=322bp
MDVASPTHALRPCQLMLRCLALWQPSNAKPLVKHLNKFGFVMLLALVGGI
IYIFYGGSSKWEGSVNGILFSAIFTVAFLCTKWHYRKGNYSWLVENELQS
ERNYSELVRRYNILAFVLWAVCSGQLVSFFYSTFKIEYHWKWIIYVYIAV
IGNGWRICWLILYAYICHVHWRLIQSIREKFRRYRNEPIEAEQIEDLMQR
FNVLKKKLNKSERALHGIISLSVAIHVVDMTAYSFAFFFEAYKNALLVVY
LLEMVFISLFIKLIPAAIVNSSLRKLMILVGDMCSPLRGEIQDQMMLYHQ
HIHITEQDIWVIEYWVSKSPLG
Run BLAST on NCBI

transcript from alignment at sc0000067:237454..244367+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006408 ID=TCONS_00006408|Name=TCONS_00006408|organism=Clytia hemisphaerica|type=transcript|length=6914bp|location=Sequence derived from alignment at sc0000067:237454..244367+ (Clytia hemisphaerica)
CCCATTCCCACTGCGTGTGGTTCTTTGGTAGTTGGCCTGGTGTATTGTTA
GTGTATTGTCTCTTTTTAGAAGGAAAAAAATGCTCATCTTACCATTTCCA
ATGACAGCTAAATAAACATAGACAACCCAATACCAACCATGAAAACTTTG
CAATTCATAAAAATAATTCCATAACAACTGACCAGCGCACACTACCCAAA
GCAGAAGAGCGAAAAGATTATATCGTTTGACAAGCTTCGCGCAATGTACC
CTTTCAGGACCCAGTTCAATCTCCAGCATTTTACTGTAATTGCCTTTTCG
GTAATACCACTTAGTGCAGAAGAAAGCTACAGCAAACGTTGCACTAAAAA
TCACACCATTGACAGActttttccaataaaatttaTTGTCGTTTTCAATG
TTATAGAAGTAAATGATAGCGGTAACGAGGAGAATCAACATAACGTATCC
AAACCTATTGTACATCCTCATCAGAAGACTTGCGTTGATCGGTTGCCATA
GTGCTAAGCCACGAAGCATCAATCGACAAGGACGTATTGTGTGAGTTGAT
TTTTCCATTATAAATAATTTGTGGGTGCTGTCCCGTTAatattttgagta
tttctacTTTACCAGAAATTAATAAAGATACAACTCGCCACGACCAGTTG
TTGTTGATTAATTCTTAACTTACATTTCTGAATGTAACATATTTTTCTCC
TCTCGAAATGATAtttgattcatttttttcagGTTTATTTACGCGTCAGT
TTGTTATTGTCGTATCTTACTGATACCCAAACAAAAACATCTCAAATTCC
ATGCTTGCTTTTCAAGGCTCTTTTGTTTGCGATGTGAGTGAGATGTGATT
TACTCTTTCAAAGAATTGCGTTCAGAATTTTGAACTGTGTAATGGATGTT
GCATCTCCAACTCATGCGCTACGACCCTGTCAATTGATGTTACGTTGTCT
AGCACTTTGGCAACCCAGCAATGCGAAACCACTCGTGAAGCATTTAAACA
AGTTTGGTTTTGTTATGTTGCTTGCTCTTGTTGGAGGCATCATTTACATC
TTCTATGGCGGTTCTTCAAAGTGGGAAGGATCTGTCAATGGGATTTTGTT
CAGCGCTATTTTCACCGTTGCTTTCTTGTGCACCAAATGGCATTACAGAA
AGGGGAACTACAGTTGGTTAGTTGAAAATGAGCTTCAAAGCGAACGCAAC
TATTCCGAACTCGTCCGAAGATACAATATTCTTGCGTTCGTACTATGGGC
TGTGTGTTCAGGCCAGTTGGTATCCTTCTTCTACTCGACATTCAAAATCG
AATATCATTGGAAATGGATTATTTATGTGTATATAGCAGTCATTGGAAAT
GGTGAGAAAACTAAACTTTCCAAGCCCATGATACGTTAGACAGCCCTACT
AGACTGTTTCCTTGAAAGATTAGCCCAATAGTAATAAGGCTGGTTAAAta
ttaagggaagaaattttcgcgagaagaaattttcgcggaatttaatttcg
cgaattaggGCGTaattcgtgaaattaaattccgcaaaacacaccaaaat
ggctaaatcgcgaaattaaattccgcgataTTCGATTTTTTGGAGGAAGA
AGACGGCGATGAACTTTAATCATGACTTTTGTTAAAGTTTGTTAATATGA
CTGAAATATGTcttgaaatcgatgaaaaatatgaaaaacattttctctct
aaaaaaaattcttttgaaatttctcattcgcgaaattaaattccgtgaaa
cttttgaaatcggctcattcgcgaaattaaattccgcgaaatttgccatt
ttgaaattctgattcgcgaaattaaattccgcgaaaatttcttctcgcga
aaatttcttcccttaaggtagtcgATTGTTTTAAAGTCACTCTCTTAGCA
GTTTCTTCCTAGATTATGTAGTCAAAGTGATACAGCAAACCGGCTTCGTT
AACTTATTGGTTAATCAACTAAACcataaaattatttattttaaggTTGG
CGTATATGCTGGTTAATTCTTTACGCGTACATTTGCCACGTTCACTGGAG
ATTGATTCAATCCATTCGCGAAAAATTTCGAAGATATCGAAATGAACCGA
TTGAAGCAGAACAAATCGAGGTTTAAATTTGTTTCTGTTTAAATATTTGC
TTGATAGAGGTCTAGAGGGTCACAAAGGCAAAGCTATATAGATTAGGACG
TAGGGCTGGTTAGTGTACACACATTGATTTTAGATCCCAACGGTTATATT
TATAGCATGCTTTTAAAACTTTACTTTTCTAATTCTATTTCAGGATTTGA
TGCAACGTTTCAATGTCCTCAAAAAGAAGTTGAACAAATCGGAGAGAGCT
TTACATGGAATCATTTCTTTATCCGTTGCGATTCATGTTGTTGATATGAC
GGCATATagttttgctttcttttttgaAGCCTATAAAAATGCGTTGTTAG
TAGTGTATCTGCTGGAGATGGTATTCATTAGCTTGTTTATCAAGGTTTGT
TTATAACAAAATGCTAGGCTTGATTAAAGTTCCTTTGAAAATAAGTTCCT
TGCTCTAACGAAAATGCTACCTGGTTTATCTGGGTGTTATTTGATGAGTT
TTAGCCAGCATTGATTTCAAATCCTCGAAGATGCTAGATTCGAaactttt
ggatgggaaatgaagccattttCGTAAAATTGATCGCTAGATTTTGAAAT
GTCACGTGAAATCAAAAAGAGGGCTGGATTCAATCCGCCATTCTAAATGC
TGCGCAAATCTTaagattcactttttcttgcttgagaaatgTTAGAGATT
CCTTCATAGCCCctggggctttaaactcaatagtTTTAAGAGGCCTGCGG
GAATGAGAGCTATTTTGagttctttttcatttcagctgATACCAGCAGCC
ATCGTGAATTCCTCACTGAGAAAACTGATGATTTTAGTTGGAGATATGTG
TTCTCCTTTGAGAGGAGAGATACAAGATCAAATGATGTTATATCATCAAC
ATATTCACATCACTGAACAAGATATATGGGTTATCGAATATTGGGTGTCA
AAATCACCGCTCGGTTGACCGGCTATTTACTCACAACGCTCGTTTCTGTG
CTCCTGGCTGTAATTCATTTCACTCGTAAGGCAAACCTCTGATAACCTCT
TAACTCGTTGCtttgggtcaagctggagtttttacaagaaaaataaaaga
tgtAAATTACAGAACAGTGGATAACTGTAACGTGCTAAAGCACTGGGCTT
CAATGTTTTAACATATCTCATACGCGGATAAAAAGCAAGGATAATCGTGT
TTTAGTTGAATTATCCCAAGAAGCGTTATCGACCGACAAATGACGATTAT
TGATTTCATATACTTATAGTGGTAAAGATGGATTTGATAGTTCTGGTAAA
TGCAATGCTGTTGAAGAAGATTCTTGTGAATAAGATGCTGGCAGTGATGA
ACGAGAATAAGGATGTGATGGTGGAGATTGTTGGAATCACCGGTATCAAT
GGAATCATTGGAATTGATCAATAgtgcaaatgatggaatcagaATCAGAA
TCCACAAGAATCAATGATATTTCTATTTTGCAACCATCAGGGCcaccatt
tttaatttttttttagttttgttgtCGATTAACtagcaattttctttaaa
acacttagaaaaaaatgaccgtggcatttaaagagttaaaaaattttggt
gaatcagctttgtcaatttttaatactcaaatacaATATATCCGTGGCAT
CTCCACCAACACCTCCATTTCTACAGCAAAAGGAAACTATGGTTAATTCC
CTGTGGTATGCAAAGGTTCTTTCCCTTTGTTTACATCGGCTTCAATGATT
TCTCACTCAAGCGGTTGGGGGTTTCCTTCTATTTCTCAACCTGCCCCTAC
CCTATAAACCTGTTTTCACAGGGGTTTtccctttatattttttttcactt
ttctagCATGTATTTAATATTTAGCCGAAATTAACCGGTTTTTCATGAAT
TATACTCTTTTATCTAATTGAGAGTTTCTTGGttcaaaaaaacacaaaaa
cttCCTTTCCCACTCTcagttttagggaaaaaatgAGACGAACATGTGTT
TTCCCTGGGGTTGCTCGAACGAGTTACCCAGTTAGCAAGGTTTCTTTCTT
CCCTTTTTCCTGTTCTTAAAACTTTCCCTTTGTCTCAGCAGATACAAAAG
TGGCGATAGTTCAACACAATTTTATCTTGAAATCACTCTATTTCTAGCCA
CCATAGAGTTCAGACATCTCTCGAAGCATGTTGCtgattattttatttct
ttttgcttCAATTGCGCCTGACTTAGTTCATCTTTTTGGAGATGATTCTT
CTTCGAAACCTCTCACGGGTACCATAACATGGTATAATGGCTTGTGTCAG
GAAGTGGACGGCCGGAAAAGGTTTTATGTGGAGAAAAAGGGTTATGAATA
CTGCGATGGACTCTGCCCCTTGGATCGATTGCCACCGTATGGTATAGAGT
TTTCATTTTGCTATTTCTGCTGCTGGGCAAACAAAACAGGTATGGTAGTT
CTTTTCGTTGCTCAAAAGCCAAATATGTGTACATATCTAATACCTGTGCA
AATTATAACCTAGATTATAACCATAATAAGTTGAGTGATTGCTTACAAGG
GGTATTCACCTTAGTGAATCACGACAGCTATTGTTTTACCGCTTCTCTTT
TTATATCTCGTGTAATTTTTCCATCGAAGAGAGATTTTTACTGAATTTTC
CAACAGGGAGGAGTTAGCTACCATTTATATTTTCTCGCTAGTTCCAGATT
TTTTTTGTAGATATCGTGTGAGCACGTTTTTAGCTCGCCCTCTTCTTTCT
tggactacacgctttttttataagaatggtgttttttcatttcatgatgg
atattcttaactttttggcgaaaatcatccaaaaatattcttacagtatt
cttaggttaagatcgaaattggcaatctacaagttaaaatgcattaaaaa
tggcattcttaggttcagttgctaaattccatgatggtgatattcttNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNgagcctggatgtgcttatttttttagcaatt
ttcagcctaaaatgttcttaaatgcgttcttaatttttcagactactcta
aatcgacaatatgatacaaaatagagagcacttaaatttggcaaaatttg
gacaaaatttttgactttcgaCTCTTGAAGATCCATCCCTAAAttcagtt
aaaactgcttaaaaagaggaaaaaattgtagtttcttgtcatttttttcc
aaactgaggctgggcatgttcttaagatgttcttaatttttcgacgaatt
tcagcctatatgttcttataaactaggttctaataaaaaaaaaacgtgta
ttcttaattttttggccattttcatcatggacattcttataaagtgcata
cttataaaaaaaagcgtgtagggaGATGTTCAGACGTGTTTAAAACTTAA
ATAAATTATTGTGTCTTATTTCTTCGTCCAAATTCCATCTATATCTGAGA
AAGATTATACTAGTCTGTCGCACGGGCATGTTCTACAAAATTATCctttt
tattttcagtggaATTGTTAcatgaagaaaaacattttcccgATCAACTG
GCAGCAAGTGAAGAGAGAGGCGACAAATATCAATCATGGTTCCACATTGC
ATTTGCGTTGCTATGCACCTTTATCCTTATCAACATCGTTTTCATTGTGG
CAATTAATGTCAATAAATACCTGAATAGGAAGAACAGAGGTGAGCTTGTA
TAAGATCTCTCTATATAAAACCGTGGGTGGGAGTTTCTATAGAAGCGCGA
GTCCGTTAGGGAATACCTGTAGCATAGGGGTGAGTTTCATCTCAATAAAC
ATGAGGTAAGGATTGACTTTCTAAATTGAAAATCTTCCTCTGTTTTTAGA
ATCTAAAGTTGATTGgatattttatttaattctACGATTTTCTATAAAAG
CGAACATACAACCTGATGAGTTGGGAGAGCAAACACGCCCGAAGAACCGC
CCAAATGGAATCAGCAATGCCGCGAATTTTGACGTAGTAATCTCTCAAAG
AGAAGATCAGCATGAAGTTGCATCAAACACACCTTTGACTGACCGTGCCA
GCGGAAGCATTCCGTTCGAAGGTCATGGTGGAATCAACATTAACAAGACT
TTCAGTTCTTCTCTGGCTTCATCACTGGATAGTGAGCAAGATGACGATTC
GTTTCCAACAACTGGCCAACGACACCAACCTCCGTCCCCAGTAACCTATG
ATGTTTCTGAAAGAGGTCAGTAATAAAGATATTTTAATTGTGATCCAAAA
TGTAACAAAAGATAGACGAGGAGAGATTTCAGCCATAAAACGGCTAACTA
ACGGGTTTGTTTTTCTATCATAGGTCAACCAGCTTTTACACCTTCACTCA
CTACGGGCGCCGCCACAAACCTACATAATGGCAATTCCGCATGCTTGAGC
CCACCCATGATGTCTGCTATTCTTGAAGATATCCCATTGGGCCAAAGAAG
TGAGCAATCTGAGGAACGCCGGATGCGAGAAGCACCCGAGAGTAACGTAG
CTTCTGATAcatgttaaaatatttttatttaactatattttacaacttta
tcTATATGgatttaaacacccctgtctcgcagccccggtgaaacCATGGT
GGAACTCTTTTCcacaatagcgctccgcaatgcatacgtcataattatta
cttttcactttttttgacatttgtacgagttgcaatcccacaattcaacg
cggctcaattaaag

Coding sequence (CDS) from alignment at sc0000067:237454..244367+

>TCONS_00006408 ID=TCONS_00006408|Name=TCONS_00006408|organism=Clytia hemisphaerica|type=CDS|length=3876bp|location=Sequence derived from alignment at sc0000067:237454..244367+ (Clytia hemisphaerica)
ATGGATGTTGCATCTCCAACTCATGCGCTACGACCCTGTCAATTGATGTT
ACGTTGTCTAGCACTTTGGCAACCCAGCAATGCGAAACCACTCGTGAAGC
ATTTAAACAAGTTTGGTTTTGTTATGTTGCTTGCTCTTGTTGGAGGCATC
ATTTACATCTTCTATGGCGGTTCTTCAAAGTGGGAAGGATCTGTCAATGG
GATTTTGTTCAGCGCTATTTTCACCGTTGCTTTCTTGTGCACCAAATGGC
ATTACAGAAAGGGGAACTACAGTTGGTTAGTTGAAAATGAGCTTCAAAGC
GAACGCAACTATTCCGAACTCGTCCGAAGATACAATATTCTTGCGTTCGT
ACTATGGGCTGTGTGTTCAGGCCAGTTGGTATCCTTCTTCTACTCGACAT
TCAAAATCGAATATCATTGGAAATGGATTATTTATGTGTATATAGCAGTC
ATTGGAAATGgTTGGCGTATATGCTGGTTAATTCTTTACGCGTACATTTG
CCACGTTCACTGGAGATTGATTCAATCCATTCGCGAAAAATTTCGAAGAT
ATCGAAATGAACCGATTGAAGCAGAACAAATCGAGGATTTGATGCAACGT
TTCAATGTCCTCAAAAAGAAGTTGAACAAATCGGAGAGAGCTTTACATGG
AATCATTTCTTTATCCGTTGCGATTCATGTTGTTGATATGACGGCATATa
gttttgctttcttttttgaAGCCTATAAAAATGCGTTGTTAGTAGTGTAT
CTGCTGGAGATGGTATTCATTAGCTTGTTTATCAAGctgATACCAGCAGC
CATCGTGAATTCCTCACTGAGAAAACTGATGATTTTAGTTGGAGATATGT
GTTCTCCTTTGAGAGGAGAGATACAAGATCAAATGATGTTATATCATCAA
CATATTCACATCACTGAACAAGATATATGGGTTATCGAATATTGGGTGTC
AAAATCACCGCTCGGTTGAATGGATGTTGCATCTCCAACTCATGCGCTAC
GACCCTGTCAATTGATGTTACGTTGTCTAGCACTTTGGCAACCCAGCAAT
GCGAAACCACTCGTGAAGCATTTAAACAAGTTTGGTTTTGTTATGTTGCT
TGCTCTTGTTGGAGGCATCATTTACATCTTCTATGGCGGTTCTTCAAAGT
GGGAAGGATCTGTCAATGGGATTTTGTTCAGCGCTATTTTCACCGTTGCT
TTCTTGTGCACCAAATGGCATTACAGAAAGGGGAACTACAGTTGGTTAGT
TGAAAATGAGCTTCAAAGCGAACGCAACTATTCCGAACTCGTCCGAAGAT
ACAATATTCTTGCGTTCGTACTATGGGCTGTGTGTTCAGGCCAGTTGGTA
TCCTTCTTCTACTCGACATTCAAAATCGAATATCATTGGAAATGGATTAT
TTATGTGTATATAGCAGTCATTGGAAATGgTTGGCGTATATGCTGGTTAA
TTCTTTACGCGTACATTTGCCACGTTCACTGGAGATTGATTCAATCCATT
CGCGAAAAATTTCGAAGATATCGAAATGAACCGATTGAAGCAGAACAAAT
CGAGGATTTGATGCAACGTTTCAATGTCCTCAAAAAGAAGTTGAACAAAT
CGGAGAGAGCTTTACATGGAATCATTTCTTTATCCGTTGCGATTCATGTT
GTTGATATGACGGCATATagttttgctttcttttttgaAGCCTATAAAAA
TGCGTTGTTAGTAGTGTATCTGCTGGAGATGGTATTCATTAGCTTGTTTA
TCAAGctgATACCAGCAGCCATCGTGAATTCCTCACTGAGAAAACTGATG
ATTTTAGTTGGAGATATGTGTTCTCCTTTGAGAGGAGAGATACAAGATCA
AATGATGTTATATCATCAACATATTCACATCACTGAACAAGATATATGGG
TTATCGAATATTGGGTGTCAAAATCACCGCTCGGTTGAATGGATGTTGCA
TCTCCAACTCATGCGCTACGACCCTGTCAATTGATGTTACGTTGTCTAGC
ACTTTGGCAACCCAGCAATGCGAAACCACTCGTGAAGCATTTAAACAAGT
TTGGTTTTGTTATGTTGCTTGCTCTTGTTGGAGGCATCATTTACATCTTC
TATGGCGGTTCTTCAAAGTGGGAAGGATCTGTCAATGGGATTTTGTTCAG
CGCTATTTTCACCGTTGCTTTCTTGTGCACCAAATGGCATTACAGAAAGG
GGAACTACAGTTGGTTAGTTGAAAATGAGCTTCAAAGCGAACGCAACTAT
TCCGAACTCGTCCGAAGATACAATATTCTTGCGTTCGTACTATGGGCTGT
GTGTTCAGGCCAGTTGGTATCCTTCTTCTACTCGACATTCAAAATCGAAT
ATCATTGGAAATGGATTATTTATGTGTATATAGCAGTCATTGGAAATGgT
TGGCGTATATGCTGGTTAATTCTTTACGCGTACATTTGCCACGTTCACTG
GAGATTGATTCAATCCATTCGCGAAAAATTTCGAAGATATCGAAATGAAC
CGATTGAAGCAGAACAAATCGAGGATTTGATGCAACGTTTCAATGTCCTC
AAAAAGAAGTTGAACAAATCGGAGAGAGCTTTACATGGAATCATTTCTTT
ATCCGTTGCGATTCATGTTGTTGATATGACGGCATATagttttgctttct
tttttgaAGCCTATAAAAATGCGTTGTTAGTAGTGTATCTGCTGGAGATG
GTATTCATTAGCTTGTTTATCAAGctgATACCAGCAGCCATCGTGAATTC
CTCACTGAGAAAACTGATGATTTTAGTTGGAGATATGTGTTCTCCTTTGA
GAGGAGAGATACAAGATCAAATGATGTTATATCATCAACATATTCACATC
ACTGAACAAGATATATGGGTTATCGAATATTGGGTGTCAAAATCACCGCT
CGGTTGAATGGATGTTGCATCTCCAACTCATGCGCTACGACCCTGTCAAT
TGATGTTACGTTGTCTAGCACTTTGGCAACCCAGCAATGCGAAACCACTC
GTGAAGCATTTAAACAAGTTTGGTTTTGTTATGTTGCTTGCTCTTGTTGG
AGGCATCATTTACATCTTCTATGGCGGTTCTTCAAAGTGGGAAGGATCTG
TCAATGGGATTTTGTTCAGCGCTATTTTCACCGTTGCTTTCTTGTGCACC
AAATGGCATTACAGAAAGGGGAACTACAGTTGGTTAGTTGAAAATGAGCT
TCAAAGCGAACGCAACTATTCCGAACTCGTCCGAAGATACAATATTCTTG
CGTTCGTACTATGGGCTGTGTGTTCAGGCCAGTTGGTATCCTTCTTCTAC
TCGACATTCAAAATCGAATATCATTGGAAATGGATTATTTATGTGTATAT
AGCAGTCATTGGAAATGgTTGGCGTATATGCTGGTTAATTCTTTACGCGT
ACATTTGCCACGTTCACTGGAGATTGATTCAATCCATTCGCGAAAAATTT
CGAAGATATCGAAATGAACCGATTGAAGCAGAACAAATCGAGGATTTGAT
GCAACGTTTCAATGTCCTCAAAAAGAAGTTGAACAAATCGGAGAGAGCTT
TACATGGAATCATTTCTTTATCCGTTGCGATTCATGTTGTTGATATGACG
GCATATagttttgctttcttttttgaAGCCTATAAAAATGCGTTGTTAGT
AGTGTATCTGCTGGAGATGGTATTCATTAGCTTGTTTATCAAGctgATAC
CAGCAGCCATCGTGAATTCCTCACTGAGAAAACTGATGATTTTAGTTGGA
GATATGTGTTCTCCTTTGAGAGGAGAGATACAAGATCAAATGATGTTATA
TCATCAACATATTCACATCACTGAACAAGATATATGGGTTATCGAATATT
GGGTGTCAAAATCACCGCTCGGTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003657XLOC_003657Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006408-exon-sc0000067-1491911889:237454..237993TCONS_00006408-exon-sc0000067-1491911889:237454..237993Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1510915933:237454..237993TCONS_00006408-exon-sc0000067-1510915933:237454..237993Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1575043694:237454..237993TCONS_00006408-exon-sc0000067-1575043694:237454..237993Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1491911889:238186..238804TCONS_00006408-exon-sc0000067-1491911889:238186..238804Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1510915933:238186..238804TCONS_00006408-exon-sc0000067-1510915933:238186..238804Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1575043694:238186..238804TCONS_00006408-exon-sc0000067-1575043694:238186..238804Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1491911889:239449..239573TCONS_00006408-exon-sc0000067-1491911889:239449..239573Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1510915933:239449..239573TCONS_00006408-exon-sc0000067-1510915933:239449..239573Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1575043694:239449..239573TCONS_00006408-exon-sc0000067-1575043694:239449..239573Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1491911889:239747..239947TCONS_00006408-exon-sc0000067-1491911889:239747..239947Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1510915933:239747..239947TCONS_00006408-exon-sc0000067-1510915933:239747..239947Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1575043694:239747..239947TCONS_00006408-exon-sc0000067-1575043694:239747..239947Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1491911889:240339..240583TCONS_00006408-exon-sc0000067-1491911889:240339..240583Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1510915933:240339..240583TCONS_00006408-exon-sc0000067-1510915933:240339..240583Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1575043694:240339..240583TCONS_00006408-exon-sc0000067-1575043694:240339..240583Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1491911889:240823..241992TCONS_00006408-exon-sc0000067-1491911889:240823..241992Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1510915933:240823..241992TCONS_00006408-exon-sc0000067-1510915933:240823..241992Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1575043694:240823..241992TCONS_00006408-exon-sc0000067-1575043694:240823..241992Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1491911889:243163..243342TCONS_00006408-exon-sc0000067-1491911889:243163..243342Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1510915933:243163..243342TCONS_00006408-exon-sc0000067-1510915933:243163..243342Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1575043694:243163..243342TCONS_00006408-exon-sc0000067-1575043694:243163..243342Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1491911889:243554..243868TCONS_00006408-exon-sc0000067-1491911889:243554..243868Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1510915933:243554..243868TCONS_00006408-exon-sc0000067-1510915933:243554..243868Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1575043694:243554..243868TCONS_00006408-exon-sc0000067-1575043694:243554..243868Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1491911889:243977..244367TCONS_00006408-exon-sc0000067-1491911889:243977..244367Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1510915933:243977..244367TCONS_00006408-exon-sc0000067-1510915933:243977..244367Clytia hemisphaericaexon
TCONS_00006408-exon-sc0000067-1575043694:243977..244367TCONS_00006408-exon-sc0000067-1575043694:243977..244367Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006408-proteinTCONS_00006408-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000067supercontigsc0000067:237454..244367 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	5.18487e-05	0	0.694255	0.000104653	0.0234968	0.526426	0.93426	0.823147	2.22866	1.23803	5.78779	3.35369	0.635161	1.22007	1.20047	2.08776	1.02197	1.33831	0.940975	0.348118	0.570781	0.12858	0	4.73083e-06	1.22441	1.47352
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006408 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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