TCONS_00006486 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006486
Unique NameTCONS_00006486
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4244

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006486 ID=TCONS_00006486|Name=TCONS_00006486|organism=Clytia hemisphaerica|type=transcript|length=4244bp
TCACCATTTCCAATGACTGCTATATACACATAAATAATCCATTTCCAATG
ATATTCGATTTTGAATGTCGAGTAGAAGAAGGATACCAACTGGCCTGAAC
ACACAGCCCATAGTACGAACGCAAGAATATTGTATCTTCGGACGAGTTCG
GAATAGTTGCGTTCGCTTTGAAGCTCATTTTCAACTAACCAACTGTAGTT
CCCCTTTCTGTAATGCCATTTGGTGCACAAGAAAGCAACGGTGAAAATAG
CGCTGAACAAAATCCCATTGACAGATCCTTCCCACTTTGAAGAACCGCCA
TAGAAGATGTAAATGATGCCTCCAACAAGAGCAAGCAACATAACAAAACC
AAACTTGTTTAAATGCTTCACGAGTGGTTTCGCATTGCTGGGTTGCCAAA
GTGCTAGACAACGTAACATCAATTGACAGGGTCGTAGCGCATGAGTTGGA
GATGCAACATCCATTACACAGTTCAAAATTCTGAACGCAATTCTTTGAAA
GAGTAAATCACATCTCACTCACATCGCAAACAAAAGAGCCTTGAAAAGCA
AGCATGGAATTTGAGATGTTTTTGTTTGGGTATCAGTAAGATACGACAAT
AACAAACTGACGCGTAAATAAACctgaaaaaaatgaatcaaaTATCATTT
CGAGAGGAGAAAAATATGTTACATTCAGAAATGTAAGTTAAGAATTAATC
AACAACAACTGGTCGTGGCGAGTTGTATCTTTATTAATTTCTGGTAAAgt
agaaatactcaaaatatTAACGGGACAGCACCCACAAATTATTTATAATG
GAAAAATCAACTCACACAATACGTCCTTGTCGATTGATGCTTCGTGGCTT
AGCACTATGGCAACCGATCAACGCAAGTCTTCTGATGAGGATGTACAATA
GGTTTGGATACGTTATGTTGATTCTCCTCGTTACCGCTATCATTTACTTC
TATAACATTGAAAACGACAAtaaattttattggaaaaagTCTGTCAATGG
TGTGATTTTTAGTGCAACGTTTGCTGTAGCTTTCTTCTGCACTAAGTGGT
ATTACCGAAAAGGCAATTACAGTAAAATGCTGGAGATTGAACTGGGTCCT
GAAAGGGTACATTGCGCGAAGCTTGTCAAACGATATAATCTTTTCGCTCT
TCTGCTTTGGGTAGTGTGCGCTGGTCAGTTGTTATGGAATTATTTTTATG
AATTGCAAAGTTTTCATGGTTGGTATTGGGTTGTCTATGTTTATTTAGCT
GTCATTGGAAATGGTTGGCGTATATGCTGGTTGATTTTATACGCGTACAT
TTGCCACGTTCACTGGAGATTGATTCAATCCATCCACGAAAAATTTCGAA
GATATCGAAATGAACCGATTGAAGCAGAACAAATCGAGGATTTGATGCAA
CGTTTCAATGTCCTCAAAAAGAAGTTGAACAAATCGGAGAGAGCTCTACA
TGGAATCATTTCTTTATCCGTTGCGATTCATGTTGTTGATATGACGGTGT
ACAGTTTTGCTTTCTTCTCTGGAGCTTTTCACTCTCGATATCATGAAAAT
GTTCGAATCACAATCTATCTGTTGGAAATATTGATGCAACACATTCTCTG
CTTGTTTATTAAGCTGATACCAGCAGCCATCGTGAATTCCTCACTGAGAA
AACTGGTGATTTTAGTTGGAGATATGTGTTCTCCTTTGAGAGGAGAGATA
CGAGATCAAATGATGTTATATCAACAACATATTCACATCACTGAACAAGA
TATGGGTTATCGAATATTGGGTGTCAAAATCACCGCTCGGTTGACCGGCT
ATTTACTCACAACGCTCGTTTCAGTTCTTATTGCTATCGTTCATGTTGAC
CAAAGCAAACAGTACTGAATAGACActaaacacaattttttttagaagag
TTATAGTCGCCAAGCGAGATTTCCATGAAGATATACACTACTGAGGAATC
AACCGTTTTATCGAACTGAGTGGTGCATTTTGACAGAATTTCAGAAATTG
GGTCTTTCAACGGAGACGGAAATTCAGGCAATTTTAGTGCAGAAAAATGG
AATTTCGGATATAGCAAAAAATGTTCGAAATTCGTGGAATAAAAcataga
atttcaaaggaattctCGGTGGCAGAATGTTGGTCCTTCTTAGACGGTTT
CAAACCGTCGGTTTAACGGAAATTGCGGAAAAATTGGCGATATGGCGGAA
TCGGGTACTGTACCATCTGAAACCCCCCTACTGATTTCCGTTGTAAATGT
GACCCATACCACTGAAAATGCTACGAAACTCGCAATAACATCTTAGGTTG
TTACTTGGagagtgagacaggggtgtttagcATTGATTTGATGCTGAATT
TCTGACttattttaaaggaaaatggtTAATCATTATTTGATTTTAGCCTG
TACCACATCGAAAGTctacgtttttttcttttccacgAAGAGGAGTTTGG
TAAAGGCTATATTTTACTGTGCTGCTTGAGGTCTTGGAGTTAGAGGTATC
TTGTCAAAAGATGTTGTTCAGAGAAGAGGGTTGGTAACAAAGCATAAATT
TTCATgtaattttctgttttctttttaaaattgttttaaaattttaatat
tttttagtaaaaattttcctttattttcaattttctattttttttctgtt
tttgtgatttttgtcaaaaaatactGACATTTATTGctaaaagtaaaagt
aaaataaaatatgtAAACTATATAATAATAAGACAAGTTTAAGCAAATCA
TGTTTCGCCTGCAActcttttttaggtttttatcgACTTACATACATATG
TAAAAACTATCGTATTGACGAGAGGATATTGAAATGGTTGAACAATAGGT
TGAAAAATtctggaaaaattaaaatgagcTGAAGATCACAAGATATGCTG
CTCAACGATAACCTGTCAACTTCTAACTTTTAGGATTTTGAGGGGGCTGG
TAATGAACTTCAAAATCGAGgcgtaaatcactcgaaaattCTCGTACATA
tcttcaaaaagtcaaaaaataagtcaaaaaaagtcaatgaaaaagtcata
aagtaaataaaatgatataaaaaagtctgtaaaaagtcaaaaagtctgtA
GTCAATCAGCGGTTGGGCGGAGAAATATTTATGGACGATGGGTGTTATTA
AAACTATTTGGGAGGAAACTTTTTTTAGGTCAAAATTGTTTGACTAGGAA
TGAATGTAAATGCTATGACTCAAGACACGAGTTCAGACATTTTAAATGTT
GATAGATGCATGCGATAATGAATGTTGAAATTTCCAAAGCTGTTTGGTCT
AATTTAAAAGCAAACGATAGATATAGGAAAACCTCGAGAGAAATGGTGTG
CAAAAACCTTGCCTTGACTCATCATTCACTACGTCGAAAAAGAGCTAGgt
tctggttcttataaaaaatgtaagaGGTTTGActaaaaagatataaaaaa
tccACCTCAACGAGCCATTCCAACCtgatcactgagacaggggtgttaaa
attAGCATGTTAGACATTTACTGAAATTAATATTTGGTTAGAAAAAACCT
aatgaataattcaatattcatttgttaaaaaatagaaaatacagGAGTTA
GGAAGatgagataaaaaaaaaatggaaagttGGGTAGTAGTGGGTAGGGG
GTTATGAACAAGAAGTTCCAAAGTTAAATTTGGCTTCAATCTACCACTCT
CTAGGATCTTTCGAAAACTTTCCcaaaaaaatacatcaaatctTCCTGGG
TCCTAACCAACCCTGTCGCTAATCTAAAAACCTGAGTTCTAGTTAAAGAA
TTAggaattaaataaaaaattcactggttcttataaaaaaatgtaatgcA
TGAACAAGGTTTGACTAAAAGGTTTATAGTTATATGAGATTAACACAACA
AAAGAATTATAGAGCCCGTTTATATGAATGATTCTCTGACAATCTAAGAG
GAAACCCCAAATCGCCGCGCCGAATAACTGAAAGGTGTGCAAACGGGCTC
TAGCTTCAGGTCCAAAAGATATTTACAAGTTGAAAACCCGTTAAATGTTG
CTCTATAAGCTAGACTAACATATAGGCAGTTTCTTCTATGGTAGGTCTTT
CGTTTTCTTCCGTGACTGGTGGGGACGGCTCCTCGGCACCTGCTTCAATG
GGATCTAAGATCTTTGTTTCGGTGGCTCCGTTACCGAGTAATGTGATCAT
TGTTTGGTTTGCAAGATTGTTCTGTTCATCGGGCGGTGATGGGG
Run BLAST on NCBI

protein sequence of TCONS_00006486-protein

>TCONS_00006486-protein ID=TCONS_00006486-protein|Name=TCONS_00006486-protein|organism=Clytia hemisphaerica|type=polypeptide|length=356bp
MEKSTHTIRPCRLMLRGLALWQPINASLLMRMYNRFGYVMLILLVTAIIY
FYNIENDNKFYWKKSVNGVIFSATFAVAFFCTKWYYRKGNYSKMLEIELG
PERVHCAKLVKRYNLFALLLWVVCAGQLLWNYFYELQSFHGWYWVVYVYL
AVIGNGWRICWLILYAYICHVHWRLIQSIHEKFRRYRNEPIEAEQIEDLM
QRFNVLKKKLNKSERALHGIISLSVAIHVVDMTVYSFAFFSGAFHSRYHE
NVRITIYLLEILMQHILCLFIKLIPAAIVNSSLRKLVILVGDMCSPLRGE
IRDQMMLYQQHIHITEQDMGYRILGVKITARLTGYLLTTLVSVLIAIVHV
DQSKQY
Run BLAST on NCBI

transcript from alignment at sc0000067:233359..238808-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006486 ID=TCONS_00006486|Name=TCONS_00006486|organism=Clytia hemisphaerica|type=transcript|length=5450bp|location=Sequence derived from alignment at sc0000067:233359..238808- (Clytia hemisphaerica)
TCACCATTTCCAATGACTGCTATATACACATAAATAATCCATTTCCAATG
ATATTCGATTTTGAATGTCGAGTAGAAGAAGGATACCAACTGGCCTGAAC
ACACAGCCCATAGTACGAACGCAAGAATATTGTATCTTCGGACGAGTTCG
GAATAGTTGCGTTCGCTTTGAAGCTCATTTTCAACTAACCAACTGTAGTT
CCCCTTTCTGTAATGCCATTTGGTGCACAAGAAAGCAACGGTGAAAATAG
CGCTGAACAAAATCCCATTGACAGATCCTTCCCACTTTGAAGAACCGCCA
TAGAAGATGTAAATGATGCCTCCAACAAGAGCAAGCAACATAACAAAACC
AAACTTGTTTAAATGCTTCACGAGTGGTTTCGCATTGCTGGGTTGCCAAA
GTGCTAGACAACGTAACATCAATTGACAGGGTCGTAGCGCATGAGTTGGA
GATGCAACATCCATTACACAGTTCAAAATTCTGAACGCAATTCTTTGAAA
GAGTAAATCACATCTCACTCACATCGCAAACAAAAGAGCCTTGAAAAGCA
AGCATGGAATTTGAGATGTTTTTGTTTGGGTATCAGTAAGATACGACAAT
AACAAACTGACGCGTAAATAAACCTGAAAAAAATGAATCAAATATCATTT
CGAGAGGAGAAAAATATGTTACATTCAGAAATGTAAGTTAAGAATTAATC
AACAACAACTGGTCGTGGCGAGTTGTATCTTTATTAATTTCTGGTAAAGT
AGAAATACTCAAAATATTAACGGGACAGCACCCACAAATTATTTATAATG
GAAAAATCAACTCACACAATACGTCCTTGTCGATTGATGCTTCGTGGCTT
AGCACTATGGCAACCGATCAACGCAAGTCTTCTGATGAGGATGTACAATA
GGTTTGGATACGTTATGTTGATTCTCCTCGTTACCGCTATCATTTACTTC
TATAACATTGAAAACGACAATAAATTTTATTGGAAAAAGTCTGTCAATGG
TGTGATTTTTAGTGCAACGTTTGCTGTAGCTTTCTTCTGCACTAAGTGGT
ATTACCGAAAAGGCAATTACAGTAAAATGCTGGAGATTGAACTGGGTCCT
GAAAGGGTACATTGCGCGAAGCTTGTCAAACGATATAATCTTTTCGCTCT
TCTGCTTTGGGTAGTGTGCGCTGGTCAGTTGTTATGGAATTATTTTTATG
AATTGCAAAGTTTTCATGGTTGGTATTGGGTTGTCTATGTTTATTTAGCT
GTCATTGGAAATGGTAAGATGAGCATTTTTTTCCTTCTAAAAAGAGACAA
TACACTAACAATACACCAGGCCAACTACCAAAGAACCACACGCAGTGGGA
ATGGGACGAAATGTGTGGATTATAGGTATCCCTCATACCTACTGTTACCC
ACATAAACGCCATATTGAGGTTATTCTTTGTGCTATACTTTAAAGGACTG
CTTCTTTCTTATTTTTTCATGGAAAAAAGTCTTGATCAACTTTTTAGGTT
GGCGTATATGCTGGTTGATTTTATACGCGTACATTTGCCACGTTCACTGG
AGATTGATTCAATCCATCCACGAAAAATTTCGAAGATATCGAAATGAACC
GATTGAAGCAGAACAAATCGAGGTCTAAATTTGTTTCTGTTTAAATGTTT
GTTTGATAGAGGTCTAAAGGGTCACAAAGACAAAACCGTATAGATTAGGG
TGTAAGGCTGGTTAGTGTCACACATTGATTTTAGATCCCAACGGTTATAT
TTATAGCATGCTTTTAAAACTTTACTTTTTGAATTCTATTTCAGGATTTG
ATGCAACGTTTCAATGTCCTCAAAAAGAAGTTGAACAAATCGGAGAGAGC
TCTACATGGAATCATTTCTTTATCCGTTGCGATTCATGTTGTTGATATGA
CGGTGTACAGTTTTGCTTTCTTCTCTGGAGCTTTTCACTCTCGATATCAT
GAAAATGTTCGAATCACAATCTATCTGTTGGAAATATTGATGCAACACAT
TCTCTGCTTGTTTATTAAGGTTTTATTACATCCCCTTCTCACAGACCCAT
TGGGAACCCTTCCCACTTGAAAAATTGTCCAAAATATCGTCCCCAGTGGA
AATTCATCATCCGATTTTTGTCCCCATTGAAAATAATCAAATAAACCAAC
CCTTACTGCATATTATGCTATTTTTTCCATCCCCACTGAATTTTCTGACT
TGAAAACAAAAGAATTTGAATCCCCAGCCATATGGGAATATCACTCCCCA
TCGAGTTTAAGTCCGTTATTTTTACCCCCACTGGCTGAAAAGATCCTGCC
GGGTCTGTGAGAGGGGATGTATTTGAGTTTCTTGAAACCCTACGAACATT
TTGATGAAATTTCCGAAATTAGGTCAACGTCAACTGTTGCGCAGTTTTAA
TAAACGGTTGGAAAGATATAGATGTGAAGTATAGTCCAATTTTCTGGAAT
TTTCGACGAAAATCTTCAATTTTAAAGAAAGAATTGGCGCTGGAATCTTG
CTTCTAATTTATACAGGGTGACAGAAATTCAGGGGGAAATAGAATAGTGG
AGTCAGGTACCCCCCCCTGACCCCCTGAAATCCTCCCTTTTACTAGAACA
AGGTCAGCCCCCCCCCTTACACTTGATGTGAGACCACTAAAGGTAAAATC
TTCAAATAGACCTGAAATTGGCGTTTTTTTGAGGTTAACACCCACTTTTT
GTTGAAATTCTTTCATTTTACTAGAAGTTTTCGAGAATCTATAATAAAAA
TTGCATTTTGTGAAAGTAATATCCGCGGTAGACACCCAAAAACTTTAAGG
TATGACTTCACTTTTTCAGCTGATACCAGCAGCCATCGTGAATTCCTCAC
TGAGAAAACTGGTGATTTTAGTTGGAGATATGTGTTCTCCTTTGAGAGGA
GAGATACGAGATCAAATGATGTTATATCAACAACATATTCACATCACTGA
ACAAGATATGGGTTATCGAATATTGGGTGTCAAAATCACCGCTCGGTTGA
CCGGCTATTTACTCACAACGCTCGTTTCAGTTCTTATTGCTATCGTTCAT
GTTGACCAAAGCAAACAGTACTGAATAGACACTAAACACAATTTTTTTTA
GAAGAGTTATAGTCGCCAAGCGAGATTTCCATGAAGATATACACTACTGA
GGAATCAACCGTTTTATCGAACTGAGTGGTGCATTTTGACAGAATTTCAG
AAATTGGGTCTTTCAACGGAGACGGAAATTCAGGCAATTTTAGTGCAGAA
AAATGGAATTTCGGATATAGCAAAAAATGTTCGAAATTCGTGGAATAAAA
CATAGAATTTCAAAGGAATTCTCGGTGGCAGAATGTTGGTCCTTCTTAGA
CGGTTTCAAACCGTCGGTTTAACGGAAATTGCGGAAAAATTGGCGATATG
GCGGAATCGGGTACTGTACCATCTGAAACCCCCCTACTGATTTCCGTTGT
AAATGTGACCCATACCACTGAAAATGCTACGAAACTCGCAATAACATCTT
AGGTTGTTACTTGGAGAGTGAGACAGGGGTGTTTAGCATTGATTTGATGC
TGAATTTCTGACTTATTTTAAAGGAAAATGGTTAATCATTATTTGATTTT
AGCCTGTACCACATCGAAAGTCTACGTTTTTTTCTTTTCCACGAAGAGGA
GTTTGGTAAAGGCTATATTTTACTGTGCTGCTTGAGGTCTTGGAGTTAGA
GGTATCTTGTCAAAAGATGTTGTTCAGAGAAGAGGGTTGGTAACAAAGCA
TAAATTTTCATGTAATTTTCTGTTTTCTTTTTAAAATTGTTTTAAAATTT
TAATATTTTTTAGTAAAAATTTTCCTTTATTTTCAATTTTCTATTTTTTT
TCTGTTTTTGTGATTTTTGTCAAAAAATACTGACATTTATTGCTAAAAGT
AAAAGTAAAATAAAATATGTAAACTATATAATAATAAGACAAGTTTAAGC
AAATCATGTTTCGCCTGCAACTCTTTTTTAGGTTTTTATCGACTTACATA
CATATGTAAAAACTATCGTATTGACGAGAGGATATTGAAATGGTTGAACA
ATAGGTTGAAAAATTCTGGAAAAATTAAAATGAGCTGAAGATCACAAGAT
ATGCTGCTCAACGATAACCTGTCAACTTCTAACTTTTAGGATTTTGAGGG
GGCTGGTAATGAACTTCAAAATCGAGGCGTAAATCACTCGAAAATTCTCG
TACATATCTTCAAAAAGTCAAAAAATAAGTCAAAAAAAGTCAATGAAAAA
GTCATAAAGTAAATAAAATGATATAAAAAAGTCTGTAAAAAGTCAAAAAG
TCTGTAGTCAATCAGCGGTTGGGCGGAGAAATATTTATGGACGATGGGTG
TTATTAAAACTATTTGGGAGGAAACTTTTTTTAGGTCAAAATTGTTTGAC
TAGGAATGAATGTAAATGCTATGACTCAAGACACGAGTTCAGACATTTTA
AATGTTGATAGATGCATGCGATAATGAATGTTGAAATTTCCAAAGCTGTT
TGGTCTAATTTAAAAGCAAACGATAGATATAGGAAAACCTCGAGAGAAAT
GGTGTGCAAAAACCTTGCCTTGACTCATCATTCACTACGTCGAAAAAGAG
CTAGGTTCTGGTTCTTATAAAAAATGTAAGAGGTTTGACTAAAAAGATAT
AAAAAATCCACCTCAACGAGCCATTCCAACCTGATCACTGAGACAGGGGT
GTTAAAATTAGCATGTTAGACATTTACTGAAATTAATATTTGGTTAGAAA
AAACCTAATGAATAATTCAATATTCATTTGTTAAAAAATAGAAAATACAG
GAGTTAGGAAGATGAGATAAAAAAAAAATGGAAAGTTGGGTAGTAGTGGG
TAGGGGGTTATGAACAAGAAGTTCCAAAGTTAAATTTGGCTTCAATCTAC
CACTCTCTAGGATCTTTCGAAAACTTTCCCAAAAAAATACATCAAATCTT
CCTGGGTCCTAACCAACCCTGTCGCTAATCTAAAAACCTGAGTTCTAGTT
AAAGAATTAGGAATTAAATAAAAAATTCACTGGTTCTTATAAAAAAATGT
AATGCATGAACAAGGTTTGACTAAAAGGTTTATAGTTATATGAGATTAAC
ACAACAAAAGAATTATAGAGCCCGTTTATATGAATGATTCTCTGACAATC
TAAGAGGAAACCCCAAATCGCCGCGCCGAATAACTGAAAGGTGTGCAAAC
GGGCTCTAGCTTCAGGTCCAAAAGATATTTACAAGTTGAAAACCCGTTAA
ATGTTGCTCTATAAGCTAGACTAACATATAGGCAGTTTCTTCTATGGTAG
GTCTTTCGTTTTCTTCCGTGACTGGTGGGGACGGCTCCTCGGCACCTGCT
TCAATGGGATCTAAGATCTTTGTTTCGGTGGCTCCGTTACCGAGTAATGT
GATCATTGTTTGGTTTGCAAGATTGTTCTGTTCATCGGGCGGTGATGGGG

Coding sequence (CDS) from alignment at sc0000067:233359..238808-

>TCONS_00006486 ID=TCONS_00006486|Name=TCONS_00006486|organism=Clytia hemisphaerica|type=CDS|length=1071bp|location=Sequence derived from alignment at sc0000067:233359..238808- (Clytia hemisphaerica)
ATGGAAAAATCAACTCACACAATACGTCCTTGTCGATTGATGCTTCGTGG
CTTAGCACTATGGCAACCGATCAACGCAAGTCTTCTGATGAGGATGTACA
ATAGGTTTGGATACGTTATGTTGATTCTCCTCGTTACCGCTATCATTTAC
TTCTATAACATTGAAAACGACAATAAATTTTATTGGAAAAAGTCTGTCAA
TGGTGTGATTTTTAGTGCAACGTTTGCTGTAGCTTTCTTCTGCACTAAGT
GGTATTACCGAAAAGGCAATTACAGTAAAATGCTGGAGATTGAACTGGGT
CCTGAAAGGGTACATTGCGCGAAGCTTGTCAAACGATATAATCTTTTCGC
TCTTCTGCTTTGGGTAGTGTGCGCTGGTCAGTTGTTATGGAATTATTTTT
ATGAATTGCAAAGTTTTCATGGTTGGTATTGGGTTGTCTATGTTTATTTA
GCTGTCATTGGAAATGGTTGGCGTATATGCTGGTTGATTTTATACGCGTA
CATTTGCCACGTTCACTGGAGATTGATTCAATCCATCCACGAAAAATTTC
GAAGATATCGAAATGAACCGATTGAAGCAGAACAAATCGAGGATTTGATG
CAACGTTTCAATGTCCTCAAAAAGAAGTTGAACAAATCGGAGAGAGCTCT
ACATGGAATCATTTCTTTATCCGTTGCGATTCATGTTGTTGATATGACGG
TGTACAGTTTTGCTTTCTTCTCTGGAGCTTTTCACTCTCGATATCATGAA
AATGTTCGAATCACAATCTATCTGTTGGAAATATTGATGCAACACATTCT
CTGCTTGTTTATTAAGCTGATACCAGCAGCCATCGTGAATTCCTCACTGA
GAAAACTGGTGATTTTAGTTGGAGATATGTGTTCTCCTTTGAGAGGAGAG
ATACGAGATCAAATGATGTTATATCAACAACATATTCACATCACTGAACA
AGATATGGGTTATCGAATATTGGGTGTCAAAATCACCGCTCGGTTGACCG
GCTATTTACTCACAACGCTCGTTTCAGTTCTTATTGCTATCGTTCATGTT
GACCAAAGCAAACAGTACTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003683XLOC_003683Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006486-exon-sc0000067-1575043694:237546..238808TCONS_00006486-exon-sc0000067-1575043694:237546..238808Clytia hemisphaericaexon
TCONS_00006486-exon-sc0000067-1575043694:237187..237311TCONS_00006486-exon-sc0000067-1575043694:237187..237311Clytia hemisphaericaexon
TCONS_00006486-exon-sc0000067-1575043694:236790..237014TCONS_00006486-exon-sc0000067-1575043694:236790..237014Clytia hemisphaericaexon
TCONS_00006486-exon-sc0000067-1575043694:233359..235989TCONS_00006486-exon-sc0000067-1575043694:233359..235989Clytia hemisphaericaexon
TCONS_00006486-exon-sc0000067-1510915933:237546..238808TCONS_00006486-exon-sc0000067-1510915933:237546..238808Clytia hemisphaericaexon
TCONS_00006486-exon-sc0000067-1510915933:237187..237311TCONS_00006486-exon-sc0000067-1510915933:237187..237311Clytia hemisphaericaexon
TCONS_00006486-exon-sc0000067-1510915933:236790..237014TCONS_00006486-exon-sc0000067-1510915933:236790..237014Clytia hemisphaericaexon
TCONS_00006486-exon-sc0000067-1510915933:233359..235989TCONS_00006486-exon-sc0000067-1510915933:233359..235989Clytia hemisphaericaexon
TCONS_00006486-exon-sc0000067-1491911889:237546..238808TCONS_00006486-exon-sc0000067-1491911889:237546..238808Clytia hemisphaericaexon
TCONS_00006486-exon-sc0000067-1491911889:237187..237311TCONS_00006486-exon-sc0000067-1491911889:237187..237311Clytia hemisphaericaexon
TCONS_00006486-exon-sc0000067-1491911889:236790..237014TCONS_00006486-exon-sc0000067-1491911889:236790..237014Clytia hemisphaericaexon
TCONS_00006486-exon-sc0000067-1491911889:233359..235989TCONS_00006486-exon-sc0000067-1491911889:233359..235989Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006486-proteinTCONS_00006486-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000067supercontigsc0000067:233359..238808 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0275108	0.0712039	0.0102537	0.0400927	4.88275	3.37192	6.29387	8.76588	4.46641	10.2384	8.85222	3.16751	6.88816	5.6053	3.5723	5.33668	1.73202	1.97593	6.43777	9.55564	2.10886	2.11081	2.40575	2.67202	4.73495	6.39372	13.4704	14.5432	8.30557	7.40762
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006486 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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