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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006502 ID=TCONS_00006502|Name=TCONS_00006502|organism=Clytia hemisphaerica|type=transcript|length=1258bp
cgcggaattAATTTCTTCGTTTTTAATTGTCTACCGCGAAAAAATTACTT
CACTTAAGGTAACCGCTGGtctgattttgctgaaatttgacTGCAAGCTT
CATCAGTACATAAGATTTATCAAAAGTTCATGTCAATAGCATTTTCCAAT
CCCTTAATACAGTAACTTAGGGCTCATTTAGGGACATGGGCAATTTTTgg
ttggtctgtaaaatatacgATACTAGAAAGTGCAAAGAATTGATCCGCTG
TCTCAAAAATACATGTCACAAaactttagcaaaaaaaaaataaagtgaaa
aaaggGGTCCTTTTCCTCAGCATTTTCAAATATTGATTACGTCATCAATG
ATAAGTGCacacttgcaaaatttcaattaatATAAATATTCCAAAAGTTA
CCAGACAGTCTTTTGTTTACGCATGGTCAGAGGAAAGCTTGCTCATCCAT
CGAATGAGGAGGAGGAATTCCAACTAGGAGTAATCTTTGTTTCGTAAATA
TTGTAGCTTAAACCAGTCGCTCATcatttcttctatttctttagCCCGGG
TTCCACTTAagttaaagctttttgatagaatGGATGGTGCGATTAAGTGG
CctggtagtatatggtaatatgcttttgcttaagATTttagtttttggat
ttttaacattttctctcaaaatggcgacctcgccaaacactcctagtcta
cttcactggactcattcttttatcaaaaagcaaagttcagccaaaagtag
actctggTCTTCTATTTCTTTAGATGCGGGGACGGTTGCTACAAAATCTA
CTAGAAGTGAACCACGTCAGCATTTGACCAGCAAACTGAAGACTGACCAC
AACCGACAAATGACTGAGCTTCGAAGTCTTCGTAAAGATCTCGTCTCTTA
CGAAGGTGGTGAAGAAGAAGCTGTGGAGTATAAGCAGAAAAATGATAATT
TACATTTCCTTGGCTCGATGCCTTACGAACAGAAAACCGTATTTGGATAT
ACGGCTTTGATTGATCCAGAGTTGAAGTTGAAGAAGACAGTTTATGGATC
ACATGATTATATTCAACAAGTTGCCAACCTGGATGAAGGGGAGTTTCAAA
TGATCAAATACATGATTGAGGGACGTTTCTTTGGACACACAGGTATGTAA
ACATCATCATCAACGTCCTTTCGCATTAAGTGTGAACTACTGTACTACTG
CGCACCGCCTAACATTTATATACCGTTGAAAATATAATTCAGAGCAGTAT
CATTTCTG Run BLAST on NCBI transcript from alignment at sc0000067:366425..368145- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006502 ID=TCONS_00006502|Name=TCONS_00006502|organism=Clytia hemisphaerica|type=transcript|length=1721bp|location=Sequence derived from alignment at sc0000067:366425..368145- (Clytia hemisphaerica)
CGCGGAATTAATTTCTTCGTTTTTAATTGTCTACCGCGAAAAAATTACTT
CACTTAAGGTAACCGCTGGTCTGATTTTGCTGAAATTTGACTGCAAGCTT
CATCAGTACATAAGATTTATCAAAAGTTCATGTCAATAGCATTTTCCAAT
CCCTTAATACAGTAACTTAGGGCTCATTTAGGGACATGGGCAATTTTTGG
TTGGTCTGTAAAATATACGATACTAGAAAGTGCAAAGAATTGATCCGCTG
TCTCAAAAATACATGTCACAAAACTTTAGCAAAAAAAAAATAAAGTGAAA
AAAGGGGTCCTTTTCCTCAGCATTTTCAAATATTGATTACGTCATCAATG
ATAAGTGCACACTTGCAAAATTTCAATTAATATAAATATTCCAAAAGTTA
CCAGACAGTCTTTTGTTTACGCATGGTCAGAGGAAAGCTTGCTCATCCAT
CGAATGAGGAGGAGGAATTCCAACTAGGAGTAATCTTTGTTTCGTAAATA
TTGTAGCTTAAACCAGTCGCTCATCATTTCTTCTATTTCTTTAGCCCGGG
TTCCACTTAAGTTAAAGCTTTTTGATAGAATGGATGGTGCGATTAAGTGG
CCTGGTAGTATATGGTAATATGCTTTTGCTTAAGATTTTAGTTTTTGGAT
TTTTAACATTTTCTCTCAAAATGGCGACCTCGCCAAACACTCCTAGTCTA
CTTCACTGGACTCATTCTTTTATCAAAAAGCAAAGTTCAGCCAAAAGTAG
ACTCTGGTCTTCTATTTCTTTAGATGCGGGGACGGTTGCTACAAAATCTA
CTAGAAGTGAACCACGTCAGCATTTGACCAGCAAACTGAAGACTGACCAC
AACCGACAAATGACTGAGCTTCGAAGTCTTCGTAAAGATCTCGTCTCTTA
CGAAGGTGGTGAAGAAGAAGCTGTGGAGTATAAGCAGAAAAATGATAATT
TACATTTCCTTGGCTCGATGCCTTACGAACAGAAAACCGTATTTGGGTAA
GCTTCCCTGCACCTCTTCAATACCAGAAAATCGATTGTTTAACCGACCCG
TATTTCAAATTTTCACACATTTTTTATTTCAAATACCAACTACCAACTAA
GAAAAAATAAGCCAATCTCGACTTGGCTTGCTATTCGGATGGGTTATTGA
AAATATGGGGTGGTGCATATCAGTACGGGAGCGACAAAATGAGTGATCAA
ATATGAAGATCAGGAATCAAAGCTTTCGAGTGAATGGTGTACTAATAGCC
GTCTTTGAACTTACTTAACTTAACAACGGACATTATAGGTAATGAGGTTT
CCCTAATTCGATCTTAATGGAGCTAAAAGTTTTCTTCGAATTAAAGAAGG
TTTGATTTACAGTGAAAATTTTATACGACTCTTTTTAGCTGAAGGGGCCA
ATGTTTCACTACGAATTACACAGTCGACGTATATGTTAATATGAATTTAT
ATCTTTCAGATATACGGCTTTGATTGATCCAGAGTTGAAGTTGAAGAAGA
CAGTTTATGGATCACATGATTATATTCAACAAGTTGCCAACCTGGATGAA
GGGGAGTTTCAAATGATCAAATACATGATTGAGGGACGTTTCTTTGGACA
CACAGGTATGTAAACATCATCATCAACGTCCTTTCGCATTAAGTGTGAAC
TACTGTACTACTGCGCACCGCCTAACATTTATATACCGTTGAAAATATAA
TTCAGAGCAGTATCATTTCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006502-exon-sc0000067-1575043694:367150..368145 | TCONS_00006502-exon-sc0000067-1575043694:367150..368145 | Clytia hemisphaerica | exon |
| TCONS_00006502-exon-sc0000067-1575043694:366425..366686 | TCONS_00006502-exon-sc0000067-1575043694:366425..366686 | Clytia hemisphaerica | exon |
| TCONS_00006502-exon-sc0000067-1510915933:367150..368145 | TCONS_00006502-exon-sc0000067-1510915933:367150..368145 | Clytia hemisphaerica | exon |
| TCONS_00006502-exon-sc0000067-1510915933:366425..366686 | TCONS_00006502-exon-sc0000067-1510915933:366425..366686 | Clytia hemisphaerica | exon |
| TCONS_00006502-exon-sc0000067-1491911889:367150..368145 | TCONS_00006502-exon-sc0000067-1491911889:367150..368145 | Clytia hemisphaerica | exon |
| TCONS_00006502-exon-sc0000067-1491911889:366425..366686 | TCONS_00006502-exon-sc0000067-1491911889:366425..366686 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000067 | supercontig | sc0000067:366425..368145 - |
Blast
The following BLAST results are available for this feature:
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