TCONS_00006603 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006603
Unique NameTCONS_00006603
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1926

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006603 ID=TCONS_00006603|Name=TCONS_00006603|organism=Clytia hemisphaerica|type=transcript|length=1926bp
ATTTCAGGCTAGACTTaataaaaatgacagaattttggTTGATCTCAGCA
CCAGGTCAAAAGACCACTCAGCAGACATGGGAATCCTGCAAGGCTAGATG
TGAAGAATTTTCCTTGATATACAAATTTAATCTTCCGGATCTCAAGGTTG
GCACACTTGATACATTGGTTGGGCTTTCTGACGAATTAGGAAAACTAGAC
ACACAAGTGGAGGGGAATGTGAAAAAGCTGGCAAATTATTTCATGGATGt
tttggaagaaaaacaagATAAAGTCATGGAAAATCTACAAGTCAATGATA
tGTACCCAGAGCAAtatttgacgaaattttcctGGCATAAAGAAAAATAT
CCAATCCATCTTCCATTGAAAAAGATCTCGGAAATCATCAGCGTTCAAGT
GTCCAAGATAGACAGtgatttgaaatcgaaagcaaCGATTTACAACACCA
TCAAGAATAACCTACAGTCTCTTGAACGTAAAGAAACCGGAAGTTTGCTG
ACAAGAAATCTGGCATCGATCGCCAAGAAGGAGCACTTTGTATTGGGTTC
AGAGTATCTACAAACACTATTAGTAGTTGTGCCAAGgAGTTTGAGTCAAG
ATTGGATGACCACGTATGAAAAATTGACAGATATGATCGTCCCCAAGTCA
TCACAGCTGGTGATAGAAGATAACGAACATTCAATTTACTCTGTCacaat
gttcaagaaagttgTCGACGAATTTAAACATCATGCACGTGAAAAGAAGT
TTGTTGTGCGGGATTTTGTATGGGATGACAGTGCAATCATTGCAAGCAAA
GAACAACTCTCGAAACTTGCACAAGATAAAAAGAAACAGTTTGGACCGTT
AGTTCGATGGTTGAGAGTGAATTTCGGTGAATTATTTATCGCTTGGACTC
ATGTCAagGCTCTACGTGTTTTTGTGGAATCGGTTTTACGTTATGGTTTG
CCTGTCAACTTCCAAGCCATGATTCTACAGccaaacaaAGGGAAGATCCG
TAAACTTCGTGATGCGTTGGATAATTTATACGCTTATTTGGATGGCAACC
AAGCTAATATTTCGAATGATCAAGTGGACATCCCTGGTTTAGTGATGGCA
CAACACGAATATTTCTCCTACGTTTACCTCAACATGAAAATCAATTTATT
CGACCGGTAAATCTGTTCCTCCCAACCAAATGCGTATGATctattaaaac
aattttttatatattttctctCTAATTTATATTGTTATTTGAATATTATA
AAAAATCTATGTGACATTAGCTGCGGGGGTTATAGCTGTCTTAGAATTTT
CGTCTCTTCAGTTAAGGTAGACTGAGTTGCCACTCAGGATTGAAACCCAA
ACTTCACAGTAATCTATCTAAGCTTTCATGAGTTGTTCTAATCTAAAGAA
GCTCGAAGTGGATCTAGCGTAAACTATTTTACGCACGACCTGATGTTTGA
AATTCATATACGgagaaattgaatttgaaatcgGGCGTAgtaagttattt
ttttctattattcaGTTTAAGTTACTTTTTTAGtcgtatttttaaaaaat
tagacgaatttgaaaaaaaaacataaattttaatgacaactttacGTTAT
CAACTCACGTGATCTTAGCCTTCTTATGTAAAACTTTGAGCGTTCAAATA
CACCAAATGATCAAGTGTTTATTACAGTTCTCTGCTTACAAACACGATCT
TTGagtcattttcaattttgggaAGGCAATCATCATGATAGAAATAATTT
TGTTTAATTTATAAttattgaaaaatacaaaaccaaatttaaaaacatgc
aaaaaattattcattaaattaaagatattttcacattttttattattttt
ttggaaatataaGTGTTTCAAAAAGTGATTATTAgctttaaatctttttt
cactCTTCGTAAAATATATTACCAAC
Run BLAST on NCBI

transcript from alignment at sc0000069:726103..734618+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006603 ID=TCONS_00006603|Name=TCONS_00006603|organism=Clytia hemisphaerica|type=transcript|length=8516bp|location=Sequence derived from alignment at sc0000069:726103..734618+ (Clytia hemisphaerica)
ATTTCAGGCTAGACTTaataaaaatgacagaattttggTTGATCTCAGCA CCAGGTCAAAAGACCACTCAGCAGACATGGGAATCCTGCAAGGCTAGATG TGAAGAATTTTCCTTGATATACAAATTTAATCTTCCGGATCTCAAGGTGa ttgattcttttttttaatatttcttcCTTTGATAACTTTGACAACTATTT TACAATTTCGTCTTTTTCATTCACTAATGCCAGAATGGATAACATACACG GTTTCCCTCATCGTGAACCATTTTAACCATACATACAAACTTTAAGAGTC TGTTATTGTTTATTGTGTTATTATTAAcactttattgaaaaatttacaaa tgaaGATTACTGTAAGCAAAAccaaaatgaagatgaaaaaaattgaaatt ctttccaacgatgtataactTCTAGCATAGCATGAATGGGTGCTGAGAAA AATAAAGTGATACAGACTGTTTGAGACTTTAGTATATAACTCACTCAGCA GTGCTTTTGTCGAAAACTTTCAATGGTGATAGTAATCTTTTTAGTCTACA GCCAGCACAAAGTTGTAAATCATAAATTTANTTGTCTAAAACTTTCAATG GTGATAGTAATCTTTTTAGTCTACAGCCAGCACAAAGTTGTAAATCATAC ATTTAATGTTTTAGGTTGGCACACTTGATACATTGGTTGGGCTTTCTGAC GAATTAGGAAAACTAGACACACAAGTGGAGGGGTAATTCCTTTTATATCT TACCCAACCAAATTAATTTTCGGGGAATCTTGCTTGTAAGATAATAAATG GTTTCGAgcgtagccgccaattaccaTGCAGACACTTTTCCATACACTTT TCGCTACCTTGAACTCGTAGAAGTCTTTTTCCCctcataaatataaaaaa aggtaTCAAAAAAGATTGGATCTAGTTTTGTGAGATAATTAAGTCGAAAG GGTGTATTAaatattgttaaccggttactttttcgaagcgggatacacgg ctttttgcgcaatgcaattggttcttttcgcatgacgacggggcTACATT Gctcagagttgcccgtcgtcaggaaaattcattgtgacgtcacttttttc aaaggaaaatgaacaatgcgttgacatcatttctctcattttttatttct gacgtcagaaattataacaatttttgatctcttttcgcttgttttttttc gctttatttcgctatttttcctggataaagcgctaaaatcGATCGAaact gaaggaaacggttaacaaatacaataatgaccggttttttcgggctgtac tgaaaatattgccctcagTCAACNTttaaatacaataatgaccggttttt tcgggctgtactgaaaatattgccctcagtcaacgcaacaacctcgcaag ctcggtcgttacttgacctcggccaatatttctcagtacagccctcacta accggtcattattgtattacaGTAAATTTAGCAATGTCAGCTACAACAGC TGTATTAATTCACTATTATTAAGTTTTCAGTATCTTTCTTCAATTTGTTG ATGTACTCCATTTCTTGTTCAGGAATGTGAAAAAGCTGGCAAATTATTTC ATGGATGttttggaagaaaaacaagATAAAGTCATGGAAAATCTACAAGT CAATGATAGTAAGAAAATAGAtattatcatttaaaaaaggattttctCGA CTGTCATGAGAAAAAAGCCTACACTTTTTATGTTACCAAACCTctttaat ttttaatctcaacTAATCCATTCCCCTTCCAGCGTCTAACCCCCACAGAA TTTCCGAATTTTTATACAATTTTATTTGAACTATTTGAGCACTTGAACAT ATTGACCTCCGGAAGTCTATTTAATCTTGACATCTTTGGACGATAATCAC ATAGAAAATATCCCGTCTTGTCCTTGGATATTTGATTTTTTAGGTCTCCA CGAGAAGTGGTGGTCGTATAACCCAATACAAATGGATTGATAAGTTACAT TTCTGTAATCTCTCTCCTCTGGTCCCTGCCCTAAATAATtcccatttttt tcatttccagtGTACCCAGAGCAAtatttgacgaaattttcctGGCATAA AGAAAAATATCCAATCCATCTTCCATTGAAAAAGATCTCGGAAATCATCA GCGTTGTAAGGGAAACTCTTCAATTATCTTAATTCAAGCAAAGTCAAAGT CGACTGGTTTTAAAAGCTTCTGAATTACTCGTCACTTTGATGATACAGCT GGTTACCTGGAGTCGAATaatatttgctttgaaaaaaagttaaatatatc ttttatatcttgaaaaattcgaatttttataATTAGAATCACttttgcta aaataaatcctGCTCAAATTCAAAGACTCCTTGACGGTGTAAAAAGTAAC ATCTATTTTATTGGAAGAGATTTGACTGGAATATGATCATTAAGATTCTC TAAAATTCTGTATTCCTTTCTCCTCAGCAAGTGTCCAAGATAGACAGtga tttgaaatcgaaagcaaCGATTTACAACACCATCAAGAATAACCTACAGT CTCTTGAACGTAAAGAAACGTGAGTTCTTTTAATCtgtgaaattttcttt gttcaCTGCTACATTCTTTCCACTTGTTCATTCATTACAGTGGATCTTTT TCCTCATATAGAGTAGTCTCATTTGTCACAGTGAGGGGGATCCCATCTGC ATGAAAATagggtcaatctcaaaattttaagttagcaaaacagaaaaatt cttagtttcctcagacactaattttgagattagACCTTTTGCCTTGATGA CAGCGATTTAATAGAGGCTAAAGTTTTCACAAGTTTCGTCGAATTAGAAT GGTCATTATATTGACTGGCCCTGTGATTGACTGGGAATGATTCTTGTGTC TGGCCTCGCTTTTACAAAATTAATACATAACTCGAACATCTAAAGAATAG AGAGAAAAAGCCGTTTTTATTTGCATTTCATTCATGGTATCTATTCATTC TACGGAAAATATTACAGTATATTCCGTTAAATTTGCCACGCTGAAGGAAA GTTCTTTAAAACGTGCCATTGCTAGTGAAAACCGAGGTATTTCCTTAGAA AAaattacgtaatgaatatcaCCAATCCACTATCTTATTTACCNTTTCCT TAGAAAAAATTACATAATGAATATCACCAATCCACTATCTTATTTACCAA CAGCGGAAGTTTGCTGACAAGAAATCTGGCATCGATCGCCAAGAAGGAGC ACTTTGTATTGGGTTCAGAGTATCTACAAACACTATTAGTAGTTGTGCCA AGGTATCTGATTATTTACTTGATcgattgttttttgttgtttatcctctc tcttttttcttttcataacaAACTCAAAGTGAAAAGAACAGTGTAGCGTA TCTGTTTGATATGTAGACGGCAATCGAATCAGTTGAGATTTCTTTCCAGG ACTTTTTGTCGTACAAAGATAATCGAAAAGGATTGAATTTTGTCGTGTAC TGGCTAGCATTTATTCAAGCTTCTTATAACCAGAGCTTTGTGGGGAATGT TAGTTTCCCTATAATTTTATTGTTCTATTTCTCTAAGCTGTGCCGTAGAG TATTGggcttttcagaaaatttttccgtACCCCCATCCCCCTGTTGAGGA AATCCATGCATTTTCTCCTATATCCTCTACTCTCCTCTCCCTCTTAAATA AGATcctaccccctggatatccagataGCATTGAACTCCCTGGATGtttg atatcctcaacaggagggggggcacggactatttcggAAAAGCCCATACC CTATAACCGTTctagaatttcaagtttttcaaataactccttttaaatga ttttgtgattttcaggAGTTTGAGTCAAGATTGGATGACCACGTATGAAA AATTGACAGATATGATCGTCCCCAAGTCATCACAGTAAGCTATATTTCCT ATTTTAGATTCGGTGTATATTCTTTTCTCTCGTCTGCACGCTAAAAAAAT AGACGTAGTCTACCCAGTCTACCTTACATCTTGCTTTTGGAAAGAAACTC TATATTTCAGTTAGCCTATCTAGTATGCTACGGATTATGATACTTGTTTT TGATTTGTAGGCTGGTGATAGAAGATAACGAACATTCAATTTACTCTGTC acaatgttcaagaaagttgTCGACGAATTTAAACATCATGCACGTGAAAA GAAGTAAGTTAGTAGATGGACTCTGCACAAAgaaggagcgatggccaagt ggtcaatgGCGTCAGCATCTTAAACCAGGGgttcgcggttcgaatccccg ctccttccaatgttccgttcagttcatagatagccggtgaatcccgtgaa aacaatcgaaagactgtctgaAAGTCCTAGATTATTGGGCTATCCACGTT AAATATCGACCCTAAACATTCCTATCCTATCTATCTTAatcttttcaaga tttttcgACGCAACCAGCATTGACCCCTTCCCCTTTGCTTGGAGTTTCTC TCTCAATGAAGTTTGATTTTATAGAACTCTCTGTAGAAGGAATAAAAGAT GTGCTAATCGACTTTTGACTGTTTTCTTATACTTTCCTCGCCGTTGTGCA GGTATCCCAAACTAGGAGTAAAGAGATTTTAGtgtttatttattcaaaat attttttccatttcatatTTTTGCAGGTTTGTTGTGCGGGATTTTGTATG GGATGACAGTGCAATCATTGCAAGCAAAGAACAACTCTCGAAACTTGCAC AAGATAAAAAGAAACAGTTTGTAAGTATTAATGAGTTAAGGGTACTTTTG CAAAGACAGGTATTTGTTATGTGCCCACGATAAGGGTAAGTTTTGACTTT TCAAAGTCTTCCTATCGTCCTTCTTAGGGTAGAAAACTTCGGAAATTTTC ATTTATCTATCTGTCCTTCTAAGggtcaattttttgataaaatttaagag TCAGTTTTCAGATTCGGTCCGTACATACATGATATTCTTCAACCCTAGTA GTAACCTGGCCCCTCCCCGGGTTTTAGAGTCATTATCAAATAACTTCATC AATATTTGGGTCGGAAACTTATCTCCCGAGGAACTACGGCTCTAAAggat tttgtaatttcttacGCTATACATAACAAACTCACCTTCATAAGCTGCGT CTGTTTGCCCTAACCTTGTACAACAACTTCTCAACACTGaactttatata tccctggaccaagatACTCAATCCCGGCTaaccaaaaatctttgatcgga atttttttgaaattagtaccctaatggcggcattACTCAATAGTggtgaa aatgcatcgagagcgctagggtctactttttctcgaatacttttgatgat gtagcgccgttagacgttaatctTAACATTGccatggcttcttctcgggt accgatcaaagatggcggatatagcttggtccagggatatataaaggtaa GTGCTTCTAACCAAACTTTCCATTCTTTATTCTTGTCTTACAGGGACCGT TAGTTCGATGGTTGAGAGTGAATTTCGGTGAATTATTTATCGCTTGGACT CATGTCAaggtttgtttgaaatttttctatttctgCTTGGATCAAATTAC GAAAAATCAGCACTCAGCCTTAAATTTAAATGTGAAGTAAACCGCTTTCG TGGATTTGCAATCGTCCCTCgcatgactaaaggttcaatctcaaaatagg tgtcttggaaaattggaaatcttgcaatcctgttctgcctttgagattgg cctttttgtcatatgaaaatatagactattcctctacatgaaaaaagggc aatctcaatctcaaagatgaccaccACAGTAANATTCCTCTACATGAAAA Aagggcaatctcaatctcaaagatgaccaccacagtaaaactctaaattt cataaggtattaattttgagattaaaCCTTAAGTTATGCGAGGGACGCAA TGGGAATAGCTATTTCGAGAGTTAGCTGGATAGTTATAAATTGTATAAGT TGTTACTTTTGGTCAAGGCCTATAAAAACAACGTTATGTTTGTCGAGAGA ATACTTTGCAGTTTTAACTTGATGGGTTTCTTACGAAAGAATTTGGAATC CGAAAACTCTTTTGCTTTAAGCTAGTAGTTCTTCTTCactatttgaaaaa ttcctGAGTCACCGAGACTGAGGTGTAACAATTTTCAGGTCACTAGTTAA ATCTTCTGTAAGCTCTTTCAACTCATCCAATTCTTTTACAGGCTCTACGT GTTTTTGTGGAATCGGTTTTACGTTATGGTTTGCCTGTCAACTTCCAAGC CATGATTCTACAGGTGGGctgagaaactttttttcttcgtttttctacta catgtttttttataagcaagtgtttaCTCCTATTTCAGGCTCGCATTGTG tttaaaattctattgttcttagaCAATAGAGTCATTGTTTAGGCACCGAA ATCTGAGCCTGTATATCCTTATAAAACGTTATGTTTatagaaaaaacatg taacttACACATGTAAGCTGTATCGCCCCGTCACCTATCGCTCCCGTCAC TTTATATTTGCTCTTTTTTGGTTATCTAgcactcgatgtagaaattttat tCCAAGACGCTGAAACTCTTAAGGCCGGGAAAGAGATTTTTCTGGAGTTT TAAAATGACGGGATTTCGCCGGACTGAGTTGAGGATTTTGCAATGGGCGG CCTGAACGCAAGCCCTCGCTTTCGGAGATTGTCGGGTCCCACCAAAATGT TCTCAGGTTTTACGTGTAAGGGCTGTTGAGCCTGACTGGGGATTCCACAC TTTAAAGGCCGACTATTATTCCcttccgatgggaaattggcccgctcctt tagagctttaacgTAGGCGGCCGCCatcagaatatcagataacttttttg gaaaacaaaaGTCAAATGACTGATCTCAGGTGTTCCCAAATAGAAGAATG ACATAACTGgattggaaaaaaagtttttataaattttaaataatctgttt ttttttctttttaatttttcagccaaacaaAGGGAAGATCCGTAAACTTC GTGATGCGTTGGATAATTTATACGCTTATTTGGATGGCAACCAAGCTAAT ATTTCGAATGATGTAAGGGTTTTTGGCTTCTGCAATTTTCACTCCCAATA AATTCGAGTTCTTCTCTTGTGTATTTGGCAAATTCTGTTTCCGCACAATC TTTATCCATAACGTGCATAAAGGTGCGATTCATATGAAGAGGGACGGCCA CAGGTCAAGGCTACGGCGCTTCAAATCGTTCAAATCTCTTTCAACGTTCC GTTCAGTTCTTTGATAGCCGGCTTTACTGTCTCTAATTCCTATATTGGGC TTTTCCTGAAATAATTTGGATATGGGTGGTggagaaaaactttttctggA AAGTTAAACCCCCCCGGACAACAGACTCCCCCCCCTCCCAGACAatcatc agttgaccccctggacatttaAAATTACCCCTAAGCAGCAAATTTGCCcc taaaacaaggcaaattttgaaaatttttcactacctccggacaaaatatc caatatatcctccaccccattTATAAAAATGTTCTGGAAGAGACCATTAC TTATCAGTTATAACTTATGAGCTATTCCTCACTCTTTCTTTTCTCTTTCT TCACTGACAGCAAGTGGACATCCCTGGTTTAGTGATGGCACAACACGAAT ATTTCTCCTACGTTTACCTCAACATGAAAATCAATTTATTCGACCGGTAA ATCTGTTCCTCCCAACCAAATGCGTATGATctattaaaacaattttttat atattttctctCTAATTTATATTGTTATTTGAATATTATAAAAAATCTAT GTGACATTAGCTGCGGGGGTTATAGCTGTCTTAGAATTTTCGTCTCTTCA GTTAAGGTAGACTGAGTTGCCACTCAGGATTGAAACCCAAACTTCACAGT AATCTATCTAAGCTTTCATGAGTTGTTCTAATCTAAAGAAGCTCGAAGTG GATCTAGCGTAAACTATTTTACGCACGACCTGATGTTTGAAATTCATATA CGgagaaattgaatttgaaatcgGGCGTAgtaagttatttttttctatta ttcaGTTTAAGTTACTTTTTTAGtcgtatttttaaaaaattagacgaatt tgaaaaaaaaacataaattttaatgacaactttacGTTATCAACTCACGT GATCTTAGCCTTCTTATGTAAAACTTTGAGCGTTCAAATACACCAAATGA TCAAGTGTTTATTACAGTTCTCTGCTTACAAACACGATCTTTGagtcatt ttcaattttgggaAGGCAATCATCATGATAGAAATAATTTTGTTTAATTT ATAAttattgaaaaatacaaaaccaaatttaaaaacatgcaaaaaattat tcattaaattaaagatattttcacattttttattatttttttggaaatat aaGTGTTTCAAAAAGTGATTATTAgctttaaatcttttttcactCTTCGT AAAATATATTACCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003731XLOC_003731Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006603-exon-sc0000069-1491911889:726103..726248TCONS_00006603-exon-sc0000069-1491911889:726103..726248Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1510915933:726103..726248TCONS_00006603-exon-sc0000069-1510915933:726103..726248Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1575043694:726103..726248TCONS_00006603-exon-sc0000069-1575043694:726103..726248Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1491911889:726767..726834TCONS_00006603-exon-sc0000069-1491911889:726767..726834Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1510915933:726767..726834TCONS_00006603-exon-sc0000069-1510915933:726767..726834Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1575043694:726767..726834TCONS_00006603-exon-sc0000069-1575043694:726767..726834Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1491911889:727675..727760TCONS_00006603-exon-sc0000069-1491911889:727675..727760Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1510915933:727675..727760TCONS_00006603-exon-sc0000069-1510915933:727675..727760Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1575043694:727675..727760TCONS_00006603-exon-sc0000069-1575043694:727675..727760Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1491911889:728163..728257TCONS_00006603-exon-sc0000069-1491911889:728163..728257Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1510915933:728163..728257TCONS_00006603-exon-sc0000069-1510915933:728163..728257Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1575043694:728163..728257TCONS_00006603-exon-sc0000069-1575043694:728163..728257Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1491911889:728580..728671TCONS_00006603-exon-sc0000069-1491911889:728580..728671Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1510915933:728580..728671TCONS_00006603-exon-sc0000069-1510915933:728580..728671Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1575043694:728580..728671TCONS_00006603-exon-sc0000069-1575043694:728580..728671Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1491911889:729306..729404TCONS_00006603-exon-sc0000069-1491911889:729306..729404Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1510915933:729306..729404TCONS_00006603-exon-sc0000069-1510915933:729306..729404Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1575043694:729306..729404TCONS_00006603-exon-sc0000069-1575043694:729306..729404Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1491911889:729968..730036TCONS_00006603-exon-sc0000069-1491911889:729968..730036Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1510915933:729968..730036TCONS_00006603-exon-sc0000069-1510915933:729968..730036Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1575043694:729968..730036TCONS_00006603-exon-sc0000069-1575043694:729968..730036Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1491911889:730213..730305TCONS_00006603-exon-sc0000069-1491911889:730213..730305Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1510915933:730213..730305TCONS_00006603-exon-sc0000069-1510915933:730213..730305Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1575043694:730213..730305TCONS_00006603-exon-sc0000069-1575043694:730213..730305Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1491911889:730779..730872TCONS_00006603-exon-sc0000069-1491911889:730779..730872Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1510915933:730779..730872TCONS_00006603-exon-sc0000069-1510915933:730779..730872Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1575043694:730779..730872TCONS_00006603-exon-sc0000069-1575043694:730779..730872Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1491911889:731596..731661TCONS_00006603-exon-sc0000069-1491911889:731596..731661Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1510915933:731596..731661TCONS_00006603-exon-sc0000069-1510915933:731596..731661Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1575043694:731596..731661TCONS_00006603-exon-sc0000069-1575043694:731596..731661Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1491911889:732344..732415TCONS_00006603-exon-sc0000069-1491911889:732344..732415Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1510915933:732344..732415TCONS_00006603-exon-sc0000069-1510915933:732344..732415Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1575043694:732344..732415TCONS_00006603-exon-sc0000069-1575043694:732344..732415Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1491911889:733125..733214TCONS_00006603-exon-sc0000069-1491911889:733125..733214Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1510915933:733125..733214TCONS_00006603-exon-sc0000069-1510915933:733125..733214Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1575043694:733125..733214TCONS_00006603-exon-sc0000069-1575043694:733125..733214Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1491911889:733763..734618TCONS_00006603-exon-sc0000069-1491911889:733763..734618Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1510915933:733763..734618TCONS_00006603-exon-sc0000069-1510915933:733763..734618Clytia hemisphaericaexon
TCONS_00006603-exon-sc0000069-1575043694:733763..734618TCONS_00006603-exon-sc0000069-1575043694:733763..734618Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000069supercontigsc0000069:726103..734618 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
122.482 124.847 96.6064 88.5863 34.6274 27.7551 42.0971 47.3186 58.9803 55.9059 52.7542 49.0467 27.8811 25.6284 53.2206 60.2562 57.5195 57.948 7.10544 13.8824 34.5454 33.2035 58.5117 58.964 41.3451 44.5972 54.6213 38.5432 80.3084 67.3375
Blast
BLAST of TCONS_00006603 vs. Swiss-Prot (Human)
Match: VATC1 (V-type proton ATPase subunit C 1 OS=Homo sapiens GN=ATP6V1C1 PE=1 SV=4)

HSP 1 Score: 459.144 bits (1180), Expect = 3.641e-156
Identity = 224/380 (58.95%), Postives = 285/380 (75.00%), Query Frame = 3
Query:   24 MTEFWLISAPGQKTTQQTWE---SCKARCEEFSLIYKFNLPDLKVGTLDTLVGLSDELGKLDTQVEGNVKKLANYFMDVLEEKQDKVMENLQVNDMYPEQYLTKFSWHKEKYPIHLPLKKISEIISVQVSKIDSDLKSKATIYNTIKNNLQSLERKETGSLLTRNLASIAKKEHFVLGSEYLQTLLVVVPRSLSQDWMTTYEKLTDMIVPKSSQLVIEDNEHSIYSVTMFKKVVDEFKHHAREKKFVVRDFVWDDSAIIASKEQLSKLAQDKKKQFGPLVRWLRVNFGELFIAWTHVKALRVFVESVLRYGLPVNFQAMILQPNKGKIRKLRDALDNLYAYLDGNQANISNDQVDIPGLVMAQHEYFSYVYLNMKINLFD 1154
            MTEFWLISAPG+KT QQTWE   +  ++    ++  KFN+PDLKVGTLD LVGLSDEL KLD  VEG VKK+A Y  DVLE+ +DKV ENL  N +    Y+T+F W   KYPI   LK ISEII+  V++ID+DLKS+A+ YN +K NLQ+LERK  GSLLTR+LA I KK+ FVL SEYL TLLVVVP+    DW+  YE L +M+VP+SS ++ ED +  + +VT+F+K VD+F+H ARE KF+VRDF +++  + A KE++++L+ DKKKQFGPLVRWL+VNF E FIAW HVKALRVFVESVLRYGLPVNFQAM+LQPNK  ++KLR+ L  LY +LD + A I +  +DIPGL ++Q EY+ YVY  +  NL +
Sbjct:    1 MTEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKARENKFIVRDFQYNEEEMKADKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIHVKALRVFVESVLRYGLPVNFQAMLLQPNKKTLKKLREVLHELYKHLDSSAAAIIDAPMDIPGLNLSQQEYYPYVYYKIDCNLLE 380          
The following BLAST results are available for this feature:
BLAST of TCONS_00006603 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VATC13.641e-15658.95V-type proton ATPase subunit C 1 OS=Homo sapiens G... [more]
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