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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006776 ID=TCONS_00006776|Name=TCONS_00006776|organism=Clytia hemisphaerica|type=transcript|length=316bp
AATGTCTGCAAATGAAATAAGACCCACTGGAAACCAACTCAGGGTCGTCg
agcaacaaaataaaaaacaacccTGGGTTTTCATCATAGAAGATGATGCA
TCAACTGAATGCTCTGACGAAATATCTGAAGACTTTGGTGGCGCCAACAG
TTTGCAAGCTGAGGTTTACAGACTTGGTCTTCGCTTGGAGGAGATTGACG
AAGAAATTGGCGATCAGATACggcaacaacaacagcaacaaaaaCCATCC
ACTACCACCGGCAACACTGGTTATGAGGACAACTTGTTGAATGGTGGTTG
TGGCGACAGTTCGAGG Run BLAST on NCBI transcript from alignment at sc0000070:183546..184790- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006776 ID=TCONS_00006776|Name=TCONS_00006776|organism=Clytia hemisphaerica|type=transcript|length=1245bp|location=Sequence derived from alignment at sc0000070:183546..184790- (Clytia hemisphaerica)
AATGTCTGCAAATGAAATAAGACCCACTGGAAACCAACTCAGGGTCGTCG
AGCAACAAAATAAAAAACAACCCTGGGTTTTCATCATAGAAGATGATGCA
TCAACTGAATGCTCTGACGAGTACGCCTATTACCTTAATGAATTTCTCGT
TATAGACTGATTCCGTGTGATGTCATTTTCACCCACGATCAGCCATTTTT
TCTGAGAAATGGTAGAAAGAATATGTACAGGATGGTTTAGTAACAACTTG
ATAACTCAAAATCTACAAACATTTCCCGTTCGGACTTTCGCATTTTTTTT
TGTTTCGTGGGTGAAATTTATGTCATTAAGGAACAGGCAGTTTGCTTGAG
GTTTGCTTAAAGATAGTCCTTAACTGGATTTTGCCGAATCGGTCCATATG
AAGAGATTATACAGAGATACCTTTTTCGACTTGGGAAAAAATAACGGGCA
ATTACATTTTATATCCATACATGGGGGAATCAGCCCAATTTACCAGATTA
CCTATTTTACGTATCATTTACTCTACATTTTATATTTTATTTCTACTGAT
TTCTATATACAGTCTTTTTATATGTTTTTGACTTTAGGACGCAATATTGA
ACACTAGAAGCCCTTTCAGTGGAAACTTTGAAGCCTCTATATTTGTGGTT
TTTGTAAAATGCATCTACTCAACAATTTTTATCACTCATTTTAGAATATC
TGAAGACTTTGGTGGCGCCAACAGTTTGCAAGCTGAGGTAATAACAAATG
CTGTAACCACAAAAAATATTCATCATTTGATAAGTAGCCTCAGTCTGGAA
GTTTCTAGTCAAGCTTTCTCCAGTCTTAAAAAAGTTTGTGATTGTCTTTC
CAACTCTNATCATTTGATAAGTAGCCTCAGTCTGGAAGTTTCTAGTCAAG
CTTTCTCCAGTCTTAAAAGAGTTTGTGATTGTCTTTCCAACTCCGATAGT
AATACTATGTAATAACAAACTAATAGAAAGTAGAAAAAATATCGTAAAAC
CGATCATTTATAATATTGGATATCTTTATACATTTTGGATCAATGTGAAA
ACCGAAGCCAATCTTCATGTTAATTTTCTTTATCGAATAAAGGTTTACAG
ACTTGGTCTTCGCTTGGAGGAGATTGACGAAGAAATTGGCGATCAGATAC
GGCAACAACAACAGCAACAAAAACCATCCACTACCACCGGCAACACTGGT
TATGAGGACAACTTGTTGAATGGTGGTTGTGGCGACAGTTCGAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006776-exon-sc0000070-1575043694:184671..184790 | TCONS_00006776-exon-sc0000070-1575043694:184671..184790 | Clytia hemisphaerica | exon |
| TCONS_00006776-exon-sc0000070-1575043694:184054..184096 | TCONS_00006776-exon-sc0000070-1575043694:184054..184096 | Clytia hemisphaerica | exon |
| TCONS_00006776-exon-sc0000070-1575043694:183546..183698 | TCONS_00006776-exon-sc0000070-1575043694:183546..183698 | Clytia hemisphaerica | exon |
| TCONS_00006776-exon-sc0000070-1510915933:184671..184790 | TCONS_00006776-exon-sc0000070-1510915933:184671..184790 | Clytia hemisphaerica | exon |
| TCONS_00006776-exon-sc0000070-1510915933:184054..184096 | TCONS_00006776-exon-sc0000070-1510915933:184054..184096 | Clytia hemisphaerica | exon |
| TCONS_00006776-exon-sc0000070-1510915933:183546..183698 | TCONS_00006776-exon-sc0000070-1510915933:183546..183698 | Clytia hemisphaerica | exon |
| TCONS_00006776-exon-sc0000070-1491911889:184671..184790 | TCONS_00006776-exon-sc0000070-1491911889:184671..184790 | Clytia hemisphaerica | exon |
| TCONS_00006776-exon-sc0000070-1491911889:184054..184096 | TCONS_00006776-exon-sc0000070-1491911889:184054..184096 | Clytia hemisphaerica | exon |
| TCONS_00006776-exon-sc0000070-1491911889:183546..183698 | TCONS_00006776-exon-sc0000070-1491911889:183546..183698 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000070 | supercontig | sc0000070:183546..184790 - |
Blast
The following BLAST results are available for this feature:
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