TCONS_00006859 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006859
Unique NameTCONS_00006859
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length781

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006859 ID=TCONS_00006859|Name=TCONS_00006859|organism=Clytia hemisphaerica|type=transcript|length=781bp
TAGCTTTTTCAAGCGAATGTGATACTGAAAAGATGACAATTTACATTCTT
ATATCCGAAATTTCAATCCCTGAAAGTGACATTTCCCAATACAATATTTC
ATGGAATGATCCTACATGTGGACCAAgtgaaaaatccaatgaaacataTT
TGGTGTTGGAAGCTGGTTATTCGTCTTGTGGCACTAAAGCTGTGGACGAA
GGCGACCACGTTATATTTAAGAATCAGGTATCCATCAATTTAAACAAGAC
CAACGCATACAAAAACGATCTATTGGAAAGGATCGATACTTTCGCCACAT
ATTCCGTTGAATGCAACGTCCCACAAGGAGTAAATGTAACACACGAACAT
GGAGCCAATATCACCAAATCTGATTTGGTTGAAGGCGTATCAAGTTCCAC
CGACCAGTTTACTGTCTCGATGAATCTTCATGAAGACGCAAAATTCAACG
CAAGTCTTAAATATCCTGCAGTTATTGATAGATTGGGACGTTTCAATTTG
GAAATTGAACTTGACACTGTTGCAGATCTGTTCATTATGCCAAGAAATTG
TTATGGTACTTCTACCTCAAATCGTGATGATGCCATTCGAGAAGATTTGA
TTACTGACGGATGTCCCAATAAAGACCATGTTTTCAAGAAAGAAACTGCT
GCTGACAATGGCAAGAAATTCCGATTTTCACTAAACGTATTCCGTTTCAA
GAACTCGAACGGTATGGTCTACATTCATTGCTCCACTCACGTCTGTTTGA
GCGGTAGTAACGAAACAAACTGTCAATTTGG
Run BLAST on NCBI

transcript from alignment at sc0000072:150693..170252+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006859 ID=TCONS_00006859|Name=TCONS_00006859|organism=Clytia hemisphaerica|type=transcript|length=19560bp|location=Sequence derived from alignment at sc0000072:150693..170252+ (Clytia hemisphaerica)
TAGCTTTTTCAAGCGAATGTGATACTGAAAAGATGACAATTTACATTCTT ATATCCGAAATTTCAATCCCTGAAAGTGACATTTCCCAATACAATATTTC ATGGAATGATCCTACATGTGGACCAAgtgaaaaatccaatgaaacataTT TGGTGTTGGAAGCTGGTTATTCGTCTTGTGGCACTAAAGCTGTGGACGAA GGCGACCACGTTATATTTAAGAATCAGGTATCGTCAATTTTCAAATCCGA CAATTcgcttttcgaaaattttctcccGGTTTATATGGTTAGGAATATTT ACTTCGTCCCTTCCCCTGTCAAACAGACACtgctttttcccaaaattttc cttagaATCCTAGGAGGATTAAGGACATTTGGAGTTGTTCTGTATTTCAA TAAGGAAATGGCATCACTTCAACGTAAATCAAAACACTTAGATATAATGG ACCAATAAAGTAATCATAATCTCGTATTGGTATAAGGATAGGCTACTCAT CCTACTGAAACGCACTTCTGACACATATCTGAATTGTTGTCTAACTTAAA TTCAAAGCAAAGGATTCCAAACCTTCTCCTAGAGAAATACCCTAGGAGGT TTTATTTAGATAAATTGCTCTCAAAtgttcataaaaaagtgaggAACTTG GAAACTTAGGACTTTTCTTTCCACTAGGTATCCATCAATTTAAACAAGAC CAACGCATACAAAAACGATCTATTGGAAAGGATCGATACTTTCGCCACAT ATTCCGTTGAATGCAACGTCCCACAAGGAGTAAATGTAACACACGAACAT GGAGCCAATATCACCAAATCTGATTTGGTTGAAGGCGTATCAAGTGAGTA AAAATAGGAATTATCAGCCGATAAAATGAGCACTATTTACACATTGAATT TGAAAACCAAAGGGCTGGAAAGGACTTAAACTTTATATAGCAAAAAAAGT CTTAACCTTAAAATTTTCGCCACAtctaaaatgaaagattgaatcgggca cttttttttattttcacactGCATATTTTAGAAATCTggtaattttactt tcaatctggcgtaAACCTTGCCTCATTGGTGATTTTATACACATTATCTT TCTAGGTTCCACCGACCAGTTTACTGTCTCGATGAATCTTCATGAAGACG CAAAATTCAACGCAAGTCTTAAATATCCTGCAGTTATTGATAGATTGGGA CGTTTCAATTTGGAAATTGAACTTGACACTGTTGCAGATCTGTTCATTAT GCCAAGAAATTGTTATGGTACTTCTACCTCAAATCGTGATGATGCCATTC GAGAAGATTTGATTACTGACGGGTAATATAACGCTTTTGTAGAATAAATT ACAAAtagcttttttgaaattcttttatcGGTACGtctaaaaaattcata aatcttggATTAACCAAAACCGTGTCTGAGCATAAGTTAACAGTGTATAA GCATGCGTTCCCCACCTGTTTCTGCAAACAAATTAATTTACTTGGACTAG accagaaaaaatgaaaagttcctGGTCTGCGAATCTTGACTAGAATTGAC TTCGTATTGAATAAAGTGCTAGATTCTGAATTTTCTTACAGTTTTCCTCA ATATTTgcctaaaatttaaatttcagaTGTCCCAATAAAGATCATGTTTT CAAGAAAGAAACTGCTACTGACAATGGCAAGAAATTCCGATTTTCACTAA ACGTATTCCGTTTCAAGAACTCGAACGGTATGGTCTACATTCATTGCTCC ACTCACGTCTGTTTGAGCGGTAGCAACGAAACAAACTGTCAATTTGGTTG TGAACAAAATAAAGGACGACGAAGACGTTCAGTGGAGGATAATACTTTGA CAACACNTTGGTTGTGAACAAAATAAAGGACGACGAAGACGTTCAGTGGA GGATAATGCTTTGACAACACTTGATGATGATTTATCCAAGGATTATGACA TTCGAACAGGATTGATCATTGTCactgaaaattctaaaagtaAGTTGCGa catctctgaaaaatttaCAGCATGAGTTAGGAATACTGCCTTGGCAAGTA AGCTTTtaacaatagaccttatcggagtttttgatttttctaaaaaagcg atgcattgtgggattgtttcgagtgtattacaatagaattccctagAGGA atatttctattgtaatacactcgaaacaatcccacaatgcatcgcttttt tagaaaaatcaaaaactccgataaggtatattcaaagaattttattaGAG GAATGACAGGCTCAAAAGAttattaaaatataataatCTGATAAAAAAAT GTTCATCCTGGAATGGCAATGTGAAGGGTGGTTGAATGAGTAAAAGAAAC ATCAAAGAATTAATAACTTGATTAGACCATTAGGtttaaagtgccaaaaa atcaGAACAACCAATCCTGCTCATCTAAAATTTACTGGTTCACATTCTTT AGGCAAGGAGTGCcacaatttttaatttcatattTGTCTCCTTCTAGATG ACGATTCAGCTCGTCAAGACACTCAAGAATCCAACAATGCTCAATTCTTT CAAACCACGACCAATATCATTCTCATTACAATTATCTTGGTGATGTTAAC TTTCGTTTGTTCTCTCTTGGTTTTTGTTGGTTTACGTCGCCGTCAAAGTG GTTCGAGAAAGAATGGCAGTAAGCTGGAAATGCACTAAACCAATATATTT AAATTAAAACTGTTCACTTTTACTTATTTAAAAACTTCGGTTAGTTACTT TCAGTTAATTTTGTACTCAATATAtaaaaatatcatgaattttttaaaat tgtataaattacatttgagaaataaagaaaaagattttacctGTACAATT AAAGTTTCTTTGACGTTGGATTTGTCATGAATATTTAGATGTTTGCTATG AAATAGAGGCACGAAGGGGCTGGAAAAATTCGTCACCCGGAAAGATGATG GAAAGTAAAATTTGCctctatatttcaaaaatatactacacgaaaaaata aaacacaatATTTCTTTCCTTAGAAATGAACAAGATTCGCCTCTGGCCCC TTTGGCTTCTATTTCATTGCTTATGTATTTTACGTCATTTTTCTTTGGAA atggaaaaaatcattaaaCTCCGGACCAAAATATTTATAATTAATACTTT GAAGCttatttaaacgtttttttcttGGGTTTAAAGTTGCATCCTTTAAA AATTGTTCCATTTTGCccctttttaactttattaTACTATATAGCCTCTT TCaatttgaagtgaaaaaagaAGAATCATCCCTTTTTCTAAAACTACCTC TAAAACCTAGTATGAATGGGATTAAGATGTATTTTGGATAACGAATTAaa cctaattgtttttgttttacattCGCATCTCTTTCTAATTCTTGCGTAGT ACTACTTCCAGATAGTCCAGAGAATGAATTATTTCGCGAGCAgcacttac ctcgttttcaagaTATTGTTATGGTAATCATAGTGTACAAGGGGGTTTCA GGTCCCACTTAACAATTTAGGTCCCACCTAAAGCGTAacctaaaattccc accctcAATCAAGATTCCCAGATTCcatgtatctcacgtttatcgtttcg tagAACACTTTGTGCGCATTTTCTgcttgataaaaatttttccgTACGAA TCCTTGCGAAGAAGAATGATTACTAAATAGCAACACAACTCTTATCGTCT CCCTTCTCTCGCAAACACTTCATTTTagtggtcggtttgaaaaatctcta atGAAAAAAGATAATGACAGCAGACCCTCtacagcaatgaattttgaaat aagtcgtagatactgggtttTTGTACAGACTGGTCTAGTGGGACCTCCTT CCATTGCGCAGAAAAATGATTTCCGGTGGGGAAATTCTTTGACCAttaca aaatttatcaaaatctcATCTCCATTGTGAGAGCTAGTGTGATTTGGAAA ATCCCTACTGGGTTTTGCAAACAGGTACTTTCCACAGATGTAAAGCCCGA AAAAACGGCTAAACATTTCTGTCTACATCACTGCGACAGGGATGTGAAAA ACTTGAATGATTCAAAAAATTCGGCAAATGGAGAAAAAGCTATAAAATAA AATCATGTCCCAATGGTAATTATTAATGTTGTAAATGACTTTCAATTCAt gccaaaaatcaaatttctatgaTTTGAGGCAATGGAATGATAATGTTGGT gggatttttttaagaaaattattttcgtaTTACTGTGGTGTATTACTATC AGTGTTGTGAAGCTTTGGTGTTGGTAAGATGTTTAGGCTTCAGGCTATAT TTTTTGTGGTTGGTTTAAATATGATCAATATACTGGGTAAGTATTACGTG ATTGTAATGTTATATTTCACATTTTTTTGGATTCTTAAAATCTTTTGGGA GTTTTGGTTTCATATTTTGCTAGGGAAATTTGAGATATTTCCgagattca aagaaaaattaatttgtaaaaatgtaaaaaaaggcATTGAACGGGGAAAG ATCTATGCTCAAATGATTAATTCCATATTTCTAAATCTTTAGTAAAAGcg aaacaattttgatttcaaattgcGTAGATATTACGCAATGACAAATATAT CCTTAGCGTCAGGATAACCTGATAACGTCTCAATACTCCTTGAGGCGAAC GCATCAGTCTATTGCATATAATTAATTACTCCTAACTTCAGTGGTAGCAA GTAAAACAAGCAGGAAATTAAATATTATCTATGAATAAGTTTTGTACAAA TTGGCTCGCTAACATTCTCCCGTATTACCACGCGATTACGCTGCAAATCT TTCTGCGCAAAATCTTATAATAAAGTATTAGCTCGAGTATTAGGATTTCA TTTCCGTAATACAGAGCACATAATTTCCGGCCCAAATGGCTGGAGAAATT CAATATGCGGTACTGAGTCAGTGGAACGTCGTGTTCTCCCAAACATCGCT CAGTGCTTAGTTTTTTACCCTTATTGccttattacatgaaaataaatatg gaagtatttaacggccttgaaattaaaacgcaaaaaattaacacgaattt tatttgctttttNNNNNNNNNNtaacggccttgaaattaacacgcaaaaa attaacacgaattttatttgcttttttaaggacaccacggctggttttaa ttaagggggtttttattaatacgaaatttttcaattcgtgttgaatattt ccatatttattttcatgtaataaggtatcTAACGTTTTCGCCTCTCattt gaaatgagtcaaaatgGTATATGGTATATTTCCTACACACGATTTTATCT GAAACTTCTTTAATATTATCATTTTTAGGTAATTCCTATTCAATACAATG CGAGTTTAACAAGCTGACCATTATCATTCCCAAAGAGGAGTCCACAATCC TTcctgaaaatgatatttctcAATACAATATCTCATGGAATGATCCTACT TGTGGACCAAgtgaaaaatccaatgaaacgcATTTGATAATGGTAGCTGA TTATTCGTCTTGTGGCACTGAAGCTGTAGACGATGAAAATGAAATCATAT TTAAAAATACGGTATTTAGGCTTTTATAAGAGCATATGGCCTTTTTagag tacactttttttattgaacaaTTTCATAGAAAAGAGTTTGGAATCGCCAA AATATATCATATTTTGTACTTTTCTGGACCACTATATTATACAATATCCA ACCTAATCTTGAGTGAAATTTCATAATAAGAAAACCTGAATCTATGAACG TTCTTCTTCTGACAGGTTCACATAGCAAAGCCTTCAACTTTATCATACAC GAATCCAGGGCTAGAAACTGTTGGCACCTTTGCAACCAATGTCAATTGAA GAAATACATGGTCAGGAAATCGGGTTTGCGCGAGACCCGAGGttgagatt ttttctattttggtcacgtgatcaaaacgCATGGGTAAAAGTCGGCGGAG AAGGAGGAGGCGAAGGTGCTACTTTAGGACTGAAACTTgtaattatttca attattatAATTTATTAACATACTTTCGGACAAAAATAATTAGTCaccca aacaacaacaaaaacaaaacatttttttccaaatatcaaaacaaacaatt ttctttcaaatagaaaaaaatggtGAAGGTGAATGGAGATGGATGTGTCT TCCCTGGCTGTCCTGTCTATCGTGGTTCTCCCCAATATAAAGGAGTAGGT TTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNTCACTGGTGAGCAATGCTTTCTCACTTATGAGCT TGAGGATTCCAAGTTTTCCATACCAAAACTTGAAATCATTATAAACTCAT CTCTTGATTTCACAGTAAANAGGTTGTTTTCACTGGTGAGCAATGCTTTC TCACTTATGAGCTTGAGGATTGCAAGTTTTCCATACCAAAACTTGAAATC ATTATAAACTCATCTCTTGATTTCACAGTGAGGGTATACGGTTGGTATTT CCCTGATGACCACAATGTTTACAAACAGCATAACCGGTCCATCAGAAAGA TCTTATTAACTGACTTCTGCtcagatattttgaaattagaaCTTTGTAAA GGTGTTTCTTCTGCCACTGCTCCAAAGTCAACATTGCATGCTATCCCTCT TAAATATGACAAAGAAGTTCAAGTTCCGTCAGAGATTCGTTATAGAAGTG ATGTTTGCGAAGTTCTAGTTCCAGGCAGTAAAGAAATATGTAGAATTTGT AATTCCtcagaaaagaagaaagatgttaaagacaaaagtaacctcACTCC AGCTTCAAAGTAATAGATAGAAAATGAATTTTACTAATTTACGCACAACA TATCCTGACAAGTATTGCAGGGCATCTCTCTCAGTCTTAGAAATGGGCTT GACTtggtttttttcttcatcaggcTCAGCTTGAGGTGATTTATAAAAAT GGACAATCTTCTCACCTAACCTTGTTATCAAAAGAGTAGCAGCAGGAAAT GATAAGGATGGAAAGTAACTGCAAGAATCAAGGGCAAACGCATCAAAAAA GCTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNTTTCaaggattttgaaaatttctttggcttCTT TAATGAGCGTTTCACAGACTTGGTTGTTATAGCACTTGAAATTATCTCGA ACTTCTTTTGGATAGCAGAGGTCTTTTTCAAGCTCTGCTATGACTTTCTT GATCAAGTCATGCAATGAGCCACGATCTAACTTAGATTGATAGTAATTTA CATAGTTATACTCTACATGCATGCAAGACATGTGCCTCGTTAACCCCCTt ttgattttgttattttaccaCAATATTTACAAACAAACTGAGGTTTTGAT GATTCCCCCTTCTCTTCTGAAGAAACTTCACTAGTGGAGACTTCTTCGAC CATGCCCACGACAACCTCACCCAATTCGAGATCCTCATCTAAAACCTCAA AGAATGCAGAAATATCCTCATTGGGGTNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNGATTTCAGTTCCAAGGTGCTCAGCCATCTTGTTTC CATGAAAAACAAAAGGTaatgtttacttttttgaacagtCCTAAGGTAGC AGACTCGCCTCCGCCGAAAACCTACCCATGCGTTtcgatcacgtgaccaa aacAAAACGAACTTCAACCTTTTAGCCGGGATTTCCTGACCAGGTAGaga attcaattgacattgttgCAACATATAAAGTGATATGCATACTTCCAAAG ATTACTCTGAATGTCACGTGGGCGTATGCAATCAATGTCATTGGTCAAGA GTCCTTTCAGATGGTCGCTTCAGAGACAAGTAAGTGTGCTTTCCCGGACA CCGTGCTCGATTACCGTGACCTGGAAACTGCTATGCGAGACCGCGACTCT TGGCGCCAAAGGTTAGAATCCATCATCTCGACCGTGgtcgaaagatgatg atgatagCGATGATGATCCTTCTCTCGAAAATTTTTGGTATCTTACAAAA TTTGCTCATATAATCCCTGCCTCGCAGCCCCGTGGGAACTTTTTTCCACT GAGGAAGTTTTATTGGAAATCCccatggggatagaaattctattgttccc aaGTCAATCCAATGGAATgcttttggagtgcaatttctttcaaattttga atttcaattttctgaaaCTGCAGGCTGAAACTGGGCCTGGAACTGCAGGG TATATTTTTCACCCGTGAAGAAATCTTTGCCTAATCTTCAAGTGGGTGTC AAAATGCATCGTTTCCAAAAAAGCCTACATCATATTTTGCCAGAGTTTAA CCATAgtaaatcacttatttttggaCAAAATTATTCCCTTCTTTGAAAAT CAATAAATCTTTGAATCCTTTAAATATCATTTTCTATTTCCAGCTTCAAG CGGCAAGTTCACTGTTTCAATAAACCTCTATAAATCGTCggaattcaatc aaaaatttacGTATCCGGCTGTTTTGGATATGATCGACCGTTTCAATTTG GAAATCGAACTTGAAAGTACCGCAGATTTATTTATCGTTCCACAAAGTTG TTACGTTACACCTGGCGCCGATCGTACTAaccttatcagggaaaatattt ttacagaaagGTATATCTACCTTATTGGCTCTTTTGACGCCGACCCTCAT TTAGCAGCGGCCCTTATTACAGCttgatttttccatttttagtcCGGCTC TATTAATCAAATGATATTGGACGGCGTTTTGGGGGTAAATTCAtttcaca gacccactaggatccctttccactggaaaaaaactatccaaaatatcgtc cccggtggaaaattatcctccaatttttatctccactgagaataatcaaa taaaacaatcctcactgcaaaatgcGATGCTTTTGttcatcgagtttcag tccgtcatttctatccccactggctgaaaaaatcctatcgGGTCtgttgt gagaagggggtgtgtaaATAGAGAATATATGGTGCAAAGAACATGAATAA GCAGGCAAACACTTGAAATGTATGAAAAAGAATCAGGCCAGTTACCGTCA TTTCTGTTTCATGATTTTAATCCATTCTCTAATTAGTTAGAATGAATTAT TTTGGCAAAGCAGAAACAATTTATCGGCTCTTGTTAATTATTAGTACGTA CGAGTGTATGCTTAGTTTTCCAGGTATTTAGTactaaaatttaaattatt cttCAGTGATAACATGTATCAAATTCTGTTCGATAATGAGCAGGACCATT AGCTACGGCATtactaattaatttttctttgaatcttTTTCAGGTGCCAT AATAATCATCATCACAGATTCAGATTACAACCGTCAGCTCAAAACACCAA GAAATTTAGATTTTCGCTTAATGCCTTCCGATTCAAAAACTCGAACGGTA TGGTCTACATCCATTGTTCGACTCACATTTGTTTGAAAGGCAGTAACGAT ACAAAATGCGAATTTGGATGTAGACGGAAAAGACGATCTGAAGATCCGAC GTTTGTTGACGTTTTGagtaaagattacgtcattcGAACTGGATTGATTA TCGTTACGTCATCGTCAATCAATAAAGGTAAGATTACTTTTCCAGACAAA TATATGTTGTAATTTAGtcccaatagaccttttcataaattaaatCACGA ACatcagcctcgttttgaaattattgtcatgTTGATTAAGTCCCAGagcg gattttatcaaaactactttatattcataaaaaaatcatcaagggacata atcaccatggaaattgtttgaatacgaggcaagtgacgttcgtaacgtaa tttatgaaaaggtctattcttcaCGAAAATGTAAATTTAATCATCACCTA ACATCATTATTAGGGAATAAATTGGGTGGGATAAATCTAAAAAGTTAAGC TCGAGGTGGAGTAAACAGTAACGGAATTGATAACTGTGTTTACGGATTTG TTCCAAACGGTTATTCTCCATAGCTGCAAATAGCGGCTTGAAACTTCGCG TTTATATTTTCCTGCGTTTACGTCCATTTAACAGATATTAGCATTTTCTT TCGAAAGTGCCATAATTTAtgagttttcttaaaataaagttagctctttt ttttcggacacactgTAATAATGTAATCGTGTTTTAGAGGAAACAAAGCT CGCAAATCCATCACTTGATGCACACGAGAACGGAACAGTTTCAAGNACta ttttagaagaaaaaaagctCGCAAATTCATCACTCGATACCCACAAGAAC GGAACAGTCTCACAGCAAAGCACTGCAAGTCATACAAAAGCTACCAACAT TTTGATTATAACTGCTTCTTCATTTGCGTTGTTCATATTTCTCGGTACCG TGGTTTTTGTATGTTATCGAAGAAGCgccaaaatgactaaaagaAATGTT ATCGTTACTGCTGATgataaaagaacaaaataactttttgacTGAGTATC ACAGATGACAAActcaaaacaatgaaatttaaCTAGAAATTCAACTGACT TGAGCAGTTAAAATTtcgtaaatttttattttttctaatttatttttttg tagttaatattaatttgatcaataaaaaatatgatcTCAATATCTAAAAT ACATCGCCCAATGCGGACTTTACTGACCCAATATATCCTTCGAAGGTCGT GTAACAAattaatttttatcaaataatttctttgttttaacAGATTGAAC CCCAAGCACAACACAAACTTTCGAATTCCCTATTTCATACCAAGAAATCA AGAGCATTGAAAGAACAACGAGTATTTTAAATGACTCGGCCGGACAATTT AAACTTTTAGAACATCTCAGTGATTAAGGGTTTTTCTTGGTTTGTATTTA GACATTTTGAGGGGTTTTTCTATTAATTAAATTGTTCCAAAATGAGGACA TAGGGAAGgggttcaatatttttatttctttgaggACTTTCATTTTAAAC GTTTTCATTTCGCTGATGATTGGTGTGAGGTGCAATGAAGCTCTGGGTAT AAAATAGGAGCTTAGTCAATTCTTAATCATTTgggtttaaagcccgaagg gactaaagaggaatcttcaacccttctcaagcaagaaaaagcgaAGCCTT AAAGGGACACTAAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNaagcgtctgtctttccttgga cacaggaacgcgggaatagtgcttataataaagagttcttataaaaaata gaaattgccgcgggagagtggattggaaagacagtattcagaaaacattt aaaaaaatagatcccattgaaagtttaatctgcagcgaaatacaacgacg tggtttactagtctaagtCTTCCagaacaaaggaaccgctaaaTAAAATC TGTCGTTAAAGTttaagggttaaagtttcgcctctaccCTTCAGGTAAAA CTTGCATTTCTCAATGCTGTTTTTCAAGTACGGTTTTTGTCTTTTCCGTA TCAAGTGACTCTAAAGAATTTCATCTCTAACATGGCCTTAAGGGAAAATG ATTTCGTGTATGCAAACCTGCGCTAAACAAAACAATAGCTTCTATTCCCT TGCAACCAATCATGATACACCAAATGACAATGGTCGTGTTCACACTGCAG ACCTTCCTTAATTAAATCCATTAACaacaaacaaagagatttatgataaA TTAATGGTTTATCACAGTTCTTTGAAGCTTCACAAAATCTTTTGGTAaca gatacacgcttttttttttataagaatagtgtactttggttgagggtaag cattattcttatttttctattgttctaaacaataggcctattgttttaaa NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCacaattagcca tatttggttagattttttattttgacatatgacatttgttttgattttgt atccgctgcatacagtttgtttacaaatttcgcaaatACTGTTATATGTC CCTTTAAGTTTTCCTcgcatttagaaattttgtttgaaaaaaaacggGTC ACGTGTTCTGGATAGGAaataaatggcttcatttcccatccaggatcTAG CCTCTTTgaggctttgaaatcaatgcgTGACCctacccattgagtttcaa gccagAAGGGCTAGAGGCANNNNNtatttttctattgttctaaacaatag gcctattgttttaaacccgaaatctcaccctgatattcttatagaagtta ttcttataaaagaaaaagcgtgtaattaaCGTAATTTTGTAGACTGTTTT CTACGAAAAGTTTGATGTTGCACTTAAAGCCAAATAAGTAGATTGAAGTT TTGAGATTAATCGTCCTCACGCATCAACAACAGTGATTGATATGAttcaa tttttacattttttctctctttttttatcttttctgttTTGCTGAAATAT ACTTTATTGCGCGAAACGCTCCTTTTGTTCATGTTGATGTgtcttcctta ataaaatcttttgttttaagggaagcctctaccctacctttaagacaata gagcttacgacttttaattaaggaagatcgattaaaagttacaatactac gcgttcgactctttgttaaatgctcgttctgtattgtagtcaacaaagga ttctcctaactacattttaATTAAGGAAGGTCTACAGTGTGAACACGACC AATAAGAATGTATTAACGTACCTATAATTAAATCCATTAATCTCATATGC CAATAAAAGCGAAAAAGATAGTCCTTAGGGAGTTAAAACTCTTATCAAAT CAAGAAGATAGATAAATTACAAAGAACAATTCCCTTGAGACCTCAAAATG TTTATAAGACCATATGCCGGGAAAAACTATAAATTAGAAATGTCTTGACA AATTATTCAATCATACAGATTCATCAGAGACACAGTGAAGCACAGTGAAG ACGTTGGAAGTTGTGTCAAAAGTAGAGTGAGGAAGATACAACAAATAATT TTAACGATGAACTCAAGGTAAGTTTTACGATTTCCAGATGAACAAACTTC TAGCAAAATAACTTGATGATTATACATCTCAGTGCTGTAGCCACATTACg gtgttttttgaaaaaggtgtaAATTTCGTCAGCGTTGTCTGTATATTTAC TTATTTGATTTATTTGCTTAATCTCTTCCCTCTTTTTACCACTTCTACGT TGAGCCGACGCCTACCACAGAACGAAATAACTAACTAGCGCACTAACTAT GTAAGATGATAGTcttatgatttgaaaatatattaataTGCACGCGATTT CTACTTgctttttgctgaaaattggCTTTCGGAGAGGCAGTTTTAGCCAA TCTGGAGGGTATAAAGTCCAAACGTTTTCCTggcccgtcggccccaacca tggtgagGCCTCCTTAAATACTAAACATATAGTGCCCCCTAAAATATAAT CTGTGTCTACGGCACTGCATCTTGTCCACAAGCACAGGCTCTTTGGTTTC TTTTTGGGTCTTTTTGGTtatacaaatttgatttttgagctTCTTTTTAT ACCGATCAACTTTGAAAACCAAAGCTGTGCAGAAATTACAACAAAACCAG TAACCAGTAAACTAAAGATATTTTTGTGGTATTTTTTCATAGAAACATGT CGTTTATGTGGTTGTCAATTATTTGTATCTTACTTTGGTATCGACCTGTT CAAGCAACCAATTCAACATCCAATACTACAACAGGTAATACAGGTATAAA TCGTCCCAGTTGTCACAACATTgtcacaacattgtttcaacggtTATCtg atgttcataacgtccatatagcGTTAAACAAACGTTGAAACAtttaacgt tgtgtgccagctgggctggTTCTCAACAATTCTCCAGAATTGATTATTTT CTGCACTAAAAATGACCCAAGGTTTAagccaaaaaagttttaaaagtctA TAACTATTGAATACCAGTAATTCTACATTGtgctactttttttattttag ctttTTCAAGCGAATGCGATACCGAGAAGATGACAATTTACATTCTTAAA TCCGAAATTTCAATCCCTGAAAGTGATATCTCCCAATACAATATTTCATG GAATGATCCTACATGTGGACCAAgtgaaaaatctaatgaaacaTATTTAG TTATGGTGGCTGGTTATTCTTCTTGTGGAACCAGAGCTGTGGACGAAGGC GACCACGTTATATTCAAAAATAAGGTATCACCATTTTATAATCAGAATGT TCTTTCAAAACACTTCTACTGGAGAATCAGGTTCGTCCTTTTGTCTGTAT AACGGACACGGTTATTTCTCGAGACCGTTCTATCTGTAGCTCTTTACAAA TAGCTTGAGTTAGAAGTGATCATTCATTATTACTTTCAGTCCTGGAATGG CATGGACTAACGGGcctgttttataaaaaaaattttgtcggATGTACGAT CAATACTTTGAAGATCTATAGCAAAAAGACCTCCAAGCCCATCTATTTTA GCTTTGGCATAGTTCAAGCTACCCATAAGGTGCACCGAAAAGTCTCGTTC TTACCACCTTTTGACTTAGATTTAAAGATTTCGTGAAACGGGATAGGGAT AGGCTACTTGTTTTTCTACTCAAACGCATTTATGACTCGTATATCTGACT ACTGGTCTTGAGTAAACTCAAGGCCTGTTAGGGGGTGGCAATtgggcaaa ttgaccgacgggtatgtaaGGCGGTGTTTTTTCAAGTTAgtagaaatgca ctgtaagggtggactttcgTGATAAAAAAATGCCATGTAAGGGTGGCGAT TTCAGAAAATccagtaaaattgaaaattcttgCCGGAATATTCTGATTTT ATGttcgataaaaatcaagaaaacaaaaatttgttcaatttattGTAAAA GCTTTTCGACTATCGTCATCGTCAGTacagtaaaaaatacataagCATAT GAAAAAGTATCTACAATTTATAAAGAAATGTTAAAAAGTTGACAAATCAC ATCAATTGTCACGGGAGCAACGATGTCATGACGATTAATGTGTTTTCTTT TGTTCCAACGTAAAATAATTTACGTTATGCCGTTTCTAAATAAGTTTAAT TGCTTAGTCTCTAGTTGATTGTTTAGTGAATGCTTTTTCAATGCGATTTG GAAAGCCTCTaagtttttcctttctttgCTCTTAAGTGGTGCCGAAATTA GAACCTTCCAGTTAAATACATGACTATTATCATGACTCTCTAAATGTTTT GCGGGCTCCGAATTCAGTGTGATAATATGGATTCACCCAATGCTTTTGCT GCACATATCGTCACTTACTCACTGCTCCCCAGGGATTGCTCTCTAAATTC TTTTATTCAGTTAAACCTGTTTGAATCCTGTCAATGTTGATGAATCTTAT TCATTAGGTATCCATCAATTTGAACAAAACCAACGCATACAAGAACGATC TATTGGAAAGGATCGATACTTTCGCTACATATTCCGTTGAATGCAACGTC CCACAAGGAGTAAATATAACACATGAAAATGGAGTCAATATCACCAAAGC TGGGTTGGTTGAAGGCGTATCAAGTGAGTCAAAATAGGAATTATCAGCCG ATAAGATGAGCACTATTTACACATTGAATTTGAAAGCCAAAGGACTGGAA AGGACCTTAACTTTATCTAGCAAGGAAAGTCTTCACCTTAAAATTTTCAC CACATCTAGAATGAAGGATTGAATCGGgcactttctttattttcacacTG CATATTTATAAATGTggtaattttactttcaatctggcgtaAACCTTGCC TCATTGGTGATTTTATACACATTATCTTTCTAGGTTCCACCGACCAGTTT ACTGTCTCGATGAATCTTCATGAAGACGCCAAATTCAACGCAAGTCTTAA ATATCCTGCAGTTATTGATAGATTGGGACGTTTCAATTTGGAAATTGAAC TTGACACTGTTGCAGATCTGTTCATTATGCCAAGAAACTGTTATGGTACT TCTACCTCAAATCGTGATGATGCCATTCGAGAAGATTTGATTACTAACGG GTAATATAACGCTTTTGTAGAATCAATTACAAATAGCTTTTTGAAACTCT TTTATCGGTACGtctaaaaaattcataaatcttggATTAACCAAAACCGT TTCTGAGAATAAGTTAACAGTGTATAATCATATGCGTTCCCCACCTGTTT CTGCAAACAAATTAATTTACTTGGACTAGAccagaaaaaatgaaatgttc CTGGTCTGCGTTTCCTGACTAGAAATAGGGAGGTCaagtatcaaagataa atcaACGCGACGAACGGGTTGGTTTTGACCCgcaacctgcagtaaacatg tggacctacattttctagaatccaggctaaaacaGCTCAATAACGAAAAA CTGAAAATCTTCGTTGTtgtgtgaaatcaagtgcgtattacttatgggta atgaatcgacggatcctgcactaatgtacttcccagttttctcaaaggtc CTCGTTGTTGAACAAAGAAGATATAACATCTACTTTTCTACCCTTACCAC CTTGCAGAGAAAAGGTCCGTTCGTCGCATAGATTTATCTTTGATTCTTAA CCTCACTATTGACTTCGTATTGAATAAAGTGCTAGATACTgaattttctt tcagttttccTCAATATTTGCCTATAATTTGAATTTCAGATGTCCCAATA AAGACCATGTTTTCAAGAAAGAAACTGCTGCTGACAATGGCAAGAAATTC CGATTTTCACTAAACGTATTCCGTTTCAAGAACTCGAACGGTATGGTCTA CATTCATTGCTCCACTCACGTCTGTTTGAGCGGTAGTAACGAAACAAACT GTCAATTTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003851XLOC_003851Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006859-exon-sc0000072-1491911889:150693..150919TCONS_00006859-exon-sc0000072-1491911889:150693..150919Clytia hemisphaericaexon
TCONS_00006859-exon-sc0000072-1510915933:150693..150919TCONS_00006859-exon-sc0000072-1510915933:150693..150919Clytia hemisphaericaexon
TCONS_00006859-exon-sc0000072-1575043694:150693..150919TCONS_00006859-exon-sc0000072-1575043694:150693..150919Clytia hemisphaericaexon
TCONS_00006859-exon-sc0000072-1491911889:151370..151535TCONS_00006859-exon-sc0000072-1491911889:151370..151535Clytia hemisphaericaexon
TCONS_00006859-exon-sc0000072-1510915933:151370..151535TCONS_00006859-exon-sc0000072-1510915933:151370..151535Clytia hemisphaericaexon
TCONS_00006859-exon-sc0000072-1575043694:151370..151535TCONS_00006859-exon-sc0000072-1575043694:151370..151535Clytia hemisphaericaexon
TCONS_00006859-exon-sc0000072-1491911889:151798..152014TCONS_00006859-exon-sc0000072-1491911889:151798..152014Clytia hemisphaericaexon
TCONS_00006859-exon-sc0000072-1510915933:151798..152014TCONS_00006859-exon-sc0000072-1510915933:151798..152014Clytia hemisphaericaexon
TCONS_00006859-exon-sc0000072-1575043694:151798..152014TCONS_00006859-exon-sc0000072-1575043694:151798..152014Clytia hemisphaericaexon
TCONS_00006859-exon-sc0000072-1491911889:170082..170252TCONS_00006859-exon-sc0000072-1491911889:170082..170252Clytia hemisphaericaexon
TCONS_00006859-exon-sc0000072-1510915933:170082..170252TCONS_00006859-exon-sc0000072-1510915933:170082..170252Clytia hemisphaericaexon
TCONS_00006859-exon-sc0000072-1575043694:170082..170252TCONS_00006859-exon-sc0000072-1575043694:170082..170252Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000072supercontigsc0000072:150693..170252 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1845.61 1962.54 2051.5 2086.87 2.89028 2.61859 0.799126 1.19799 0.599416 6.01059 0.227099 0.20553 0.00155662 0.0436471 0 0.0661286 0 0 0 0 2.59647 0.837427 664.9 582.986 0 0.106273 25.5518 29.1657 331.742 394.697
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006859 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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