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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006913 ID=TCONS_00006913|Name=TCONS_00006913|organism=Clytia hemisphaerica|type=transcript|length=3350bp
AGGAAGTGTATGATATAAGGATTATTCCAATTAAGAAATCATGAAGTTCA
GAGGACtgtcgaaaaagaaaaaaacaccgtCTACAACTGCATCCAATGAA
AAACCGTCAAAAATTCCATTACCCAATCAAAAGACTCGAACAAAGGAAGA
GTCATCCAATGATAAAACAGAAACAAGAAGACCTGTCAATCAAAAGTCAC
GTGGTCAGCAACAGCAGCAACCGAcatcaaatgaaaaatcaaaatccaaT
AAGTCTGATAGATCACAAAAGCATGATTCAAAAACcgaaaaacatggctc
aaaacCAGAATTGAGTGATGTAAAGTCGCGTTCAAAATACGCCCGCGCGT
TCAAAATCGAAACCAAGAAGCGGACGTGCAACAATGAAGAGAAAATCCAT
GTTGAAAAACAGGCTATCAAATCAAAACCGGTTGTTGAGGAGAAAGAGGA
ATTTGTTGTGGATGAGAGTCCGTTCCATTTGAGTCATCTTCCACGCTTTG
ATCGTTCGCGCGCGGAACGCGCGTCCATCACATCAATCGAGCGTGTCTCA
AATAGTCCTTTACGTACCAACAAAGTATATGCAAAAGCACCAAGCCCTAG
TCTATCTAACAAGGAATCGAGCACGCCAAAATCAACTGATGACTTTTTAG
ATAGTCCGTTTTCTTCTAAACCGAGTGATCCATTCAAAGATGTGCGAATA
GGAAGTAAGAGCAAGAGATCGGCAGCTAGTCTAGGATTTGTTGAGGAGGG
ATCGCGTGAGGATTTACTGAACGACGAAGAGAGTTCATGTCCAACATCGA
TTGAAAACGATCAACTCGATCTTTTAAACGAAACGATTGATGAACCAAGT
TTTGATGATGGTTATCATACATTGCGGACCGAGAGGAGCGATCCTTGGTC
AAACTTAAGTAAAGAGGATCCATGGTCAAGCTTTGAAACGGAAACATTAA
ATGCTAATAATAACGCAATAACAAAATTGAAATCCACTCCGAATCTAACA
ATCGATGAAGACATCGAGAAATCCGATTTCGATGATGAATCGATTGACTT
CATCGATAAAAAACGAATCTCAGCGATTAAACGTCGATcaaaaaatgcac
gatatagtGTTTATCAGCCCATGGATACGAAAAATTCAATCGATACTTTT
gattcattttccttggggaATAAATTTGCTTCGGAAACTACATTGACAAA
GATACAGCCAGTTTCGGCACGGAACTCAGGAACTATAGATCGTAGACGGC
GTAGCAAAGACATTAACCGATCAATGACGTTGTATTGGGACGGTGCAATG
GACACTCCAACAAACCCGGAAAATCTCGTCTTCAACGTTAGTATGAACGC
TAAAATTCAAACAAGTAGTTTTCAAGACACTATCNGGCACGGAACTCAGG
AACTATAGATCGTAGACGGCGTAGCAAAGACATTAACCGATCAATGACGT
TGTATTGGGACGGTGCAATGGACACACCAACGAACCCGGAAAATCTCGTC
TTCAACGTTAGTATGAACGCTAAAATTCAAACAAGTAGTTTTCAAGACAC
TATCTTACATTCAGCTGCTACAAACGGGAATGTCGATATCGCCCGATTTT
ACGTTGAATCCGATCAATATCTGAACGCCCAAAACGGGTTTAGGAATACG
CCCCTTCATTGTGCCATTCTAGGGCGTAAAATGGATATCATTGATATTTT
ATTgactaaaaatttggatttATCGATACAAAATATTGATGGAGATACGG
CGCTTCATTTAGCTGTACGATCAAACATGGTAGATTTGGTAGCTAAGTTG
GTTGCTAGGgacatgaaaaatattaatttgcaGAATAAAGATGGCGACAC
TGTTTTgcatatttcaatttggcagATGAATGAAAAAATAGTCGAGTTAT
TAATTTGCGATGAGCTTAATATTGATATTCAAAATAACTCGATGGATACT
CCCTTACATTTATCCGATAAACTAAACAGCCAATTAAAATCAAGAATTCT
TGAACAAGCTTTTAAAGGACCAATCGGAAAACACGATCACGATCACGTGA
TATCTTCCGACCAATCAAAAGACAGTTTAGGAGAAGGGAGCCAATCAGCA
AGAAGCATGGATAATGATAAATGTATTGGAAATATCACAAACAACAAGGC
TGAAACACTCTTACATATTTTTGCCGCACAAAACGAGAAAGACcttcttg
aaaaaatcttaTCTCTAAGATGCACCAAAACAAAACTCAGGAACTGTAAC
TCAGAAACAGCACTTCATGTAGCAGTTAGAAACTCAAGCATTGACCTGAT
AGAACCACTCATCAGAGAAGATTTAGAACTTCTCAATATGGCAGATAGCA
ATGGGGACACCATCTTACATTACGCAATCAGAGCTAAAAACGTCGAATTA
ACTGAAAAGTTGATCAAACTAGGAATTGACTTGAATCGCTGTAATAAGCT
TGCCCAATCTCCGCTACATTTGTCCATCAGCGTTGAAAACACTGCCATAT
TGAGACTTCTCCTGAAAAAGAATGCTAACCTATGGGTTCAAGATAATAAT
GGTTGTTATCCAGTACACTACATTGCTAAAACACGGAACACTGAAATCCT
CCAATCATTTGCCGAGTTATTTTCTATTCAACCAATCACCAGTCAGCATC
GACGAAATGACGTCATTCCGCTCcaaagtgacgtcatcaatataATGGAT
ATGCTTGATAAAGAAGGGAACAGTCCTCTCCATACATCCGTTATCGAAAA
TAACGTTccgttttttaaactttttgtccGAAATGACCGTACTCATCTGA
CgtcacaaaacaaaaatggagACACTGTTTTACACTTGTTGGCTCGATAT
AATCGGAACAGATTTCTTGATTTCCTTGACTTGAGCCATGTCAATACAAA
TGTACTAAATAACAAAGGACAAACGCCTTGGAATATCGCGTTAAGCCGTG
AATATAGCGATGTAGCGATGTTTCTGTTACAAAACAAATGGAACTTATCA
ATGGACATTTGAGAGTGGACATTCCTcacagctgacacacaacgatgctt
caacgtttttctaatgttcataaccgttcatataacgttagatgaacgtt
aaacaatgtTTTGAGTCAGCTGGAGCTCAGCTACCCGAAATCACTGTGAT
TGCGTTATAAgcctgattttcattttttgataattGTGTGATGGTAGTGA
AAATCGATTTTGACCAGTGTTGAAGGAAACTGTATTTATATTTATTGGAA
AAAATTACAACTATACTTATgataataaagaatttcttacTTAAATGACG
TTCcgtcttttaaattttttgagaaaagccTTTATTCATTTGACAAGAAA Run BLAST on NCBI transcript from alignment at sc0000072:703047..710006+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006913 ID=TCONS_00006913|Name=TCONS_00006913|organism=Clytia hemisphaerica|type=transcript|length=6960bp|location=Sequence derived from alignment at sc0000072:703047..710006+ (Clytia hemisphaerica)
AGGAAGTGTATGATATAAGGTAAGatattggtattttttttctctgaaaa
ttaatattctttaaaatataGTTAAACCTAGTTTGAATCATATAGATTAT
ATAGATATACATACTTTCTTGTTAAAGAGGATCTACTGAGTATTGAGCAG
CTtctataagaaactcttttcgctagaggatgagcagaagcctgaACTGA
AGAGTTAGTTCATGcaatgtttccagctcacccaaataatgacttatacg
catgcgtaatttgccgTTCTTTTAGACCATATATAGTTAATTTCCGTGAT
AAACAaaagaggaatgaatctgtaggggtggtacagtcacaatatgaaat
ttgtcgttctttaaaaatttgtcgttctttttgacgctttttaatagtta
tttgtcgttctttttagatggtctggaaGCGTAAGATGAACAGTTTCGTT
AAtaacaaatttcaaattcaaaacagattatacacccctgtctcacagct
ccagtgaaactttttcccacagcggggataaaaatgcAGTGGGGTGGTTT
TAAATCcagttgggatggttttggattgcaattttttacatcGGATCCTG
AATTGGGATGAAATTCAAGTCAATTTCCAAATGGTGCTAagattgtaggg
tatttttcccacagGGGATAaaatctttgccaaattttcaattggggctg
gggtcccagcgggtctgtgacacaggggtgtagaTATTGAAGTTTATCAA
AATcgtaaattgtaaaaattgtagaTATCCCATTTTAGAAATATACacat
tttatttataagcaactgcagttttaagtaaagaaactaagcatATTAAG
accatcgtaagaacatttgagtctgagtcaaaatttacaagttcttacaa
aaaaagcgggtaaaaacaatttaacaaaatGATCCCATAAAGCTTACAGA
AAAATAAGCCTGTGAGATCACTAATGTAAAGCCTGTATCATCCTGTAACG
ANggaggatgagcagaagcctgaATTAGAGTTATTTCATGcaatgtttcc
agctcacccaaataatgacttatacgcatgcgtaatttgccgTTCTTTTA
GACCATATACAGTTAATTTCCGTGATAAACAaaagaggaatgaatctgta
ggggtggtacagtcacaatatgaaatttgtcgttctttaaaaatttgtcg
ttctttttgacgctttttaatagttatttgtcgttctttttagatggtct
ggaaGCGTAAGATGAACAGTTTCGTTAAtaacaaatttcaaattcaaaac
agattatacacccctgtctcacagctccagtgaaactttttcccacagcg
gggataaaaatgcAGTGGGGTGGTTTTAAATCcagttgggatggttttgg
attgcaattttttacatcGGATCCTGAATTGGGATGAAATTCAAGTCAAT
TTCCAAATGGTGCTAagattgtagggtatttttcccacagGGGATAaaat
ctttgccaaattttcaattggggctggggtcccagcgggtctgtgacaca
ggggtgtagaTATTGAAGTTTATCAAAATcgtaaattgtaaaaattgtag
aTATCCCATTTTAGAAATATACacattttatttataagcaactccagttt
taagtaaagaaactaagcatATTAAGaccatcgtaagaacatttgagtct
gagtcaaaatttacaagttcttacaaaaaaagcgtgtaaaaacaatttaa
caaaatGATCCCATAAAGCTTACAGAAAAATAAGCCTGTGAGATCACTAA
TGTAAAGCCTGTATCATCCTGTAACGAGTTGTTTTAAATCATGTGTCGGT
CAAGAAAACCGCAACAATTTCTTTACATTGAAAATatagaaacatttttc
aagGGATAATGTTTTAGTCCAGTCTAAACAAAAGTCTAACAAATTCAGAC
TAAAGATTTAGAACTTAAtagtaaagaaaattttatttcaatttcacaaT
ATTTAACGCTTGGTTCCAGAATGGTAAGAAGGGATCTTTGCGATTTTGTA
TTATTTTGaatacatcttttcgaccgtagtcgcgcggtcaggcgcgtgcc
actttattatttaatttaccaccctaaactcgatccaatccttttttgac
acattattctattgtctataggcgcgaaaaaaggactgggacggttttag
tgggataaagcggacaacaAAATGGCCgcgcggctacggtcgaaaaggtg
tatttcttTAGGATTAGCAGACGTGGAAATATGAGTTCGAATCTTTACTT
AGACTGCGCGCATCTCTGAAATTGagtttgatataggggatgcgcaGTGT
GTATAAACTTCCCGTGTCAAGAAGATAGATACAAATTTGATAAGTATTAC
GACtctcctttgttttcgagtacatgttttttttaagaaacaaactttta
agaaacatgaggctcagaatgcctaaaaactaagaaacatgaggctcaga
atgcctaaaaactaagaaacatctaaaaaACATGCCGAgactgagaatga
gaaaataacattttttaattagattttttaaagaacattcccatcaaaag
aaatgttttttttcctttgcatgaaaaataggctgattatgtcaaaaagt
ttagaaacatgtaagaaacatgtaaggctcaaaaggccaatttcttaaga
aacattgaggctgcttagtaaaactagtttcttaaaaaaaaacatgtaaa
gaCACACATAAAGTGTAACGATCACTCAGCCTATTCGGTAAAATATACcc
ctcaaaaacacaaagacgcGGGTAACACTCTGAGACGGGATTTTTAGAgg
tcatttcacagtcgaaatggatcatgggtaatcaagaATAATTGCGCCCC
GCTAACGGTTtcccgttggctagacgcaaaaatctttcaaaatttttcaa
aacaacagaCAAATAGcacgcagtggtcctgattacccataacgctttgc
gactgtgaaatgggcTAAACACGATacacatcccctatatcaaaacatat
ccgGGGGATACATGCCTCCtaatctttactttattatcTATCTTTATAGG
ATTATTCCAATTAAGAAATCATGAAGTTCAGAGGACtgtcgaaaaagaaa
aaaacaccgtCTACAACTGCATCCAATGAAAAACCGTCAAAAATTCCATT
ACCCAATCAAAAGACTCGAACAAAGGAAGAGTCATCCAATGATAAAACAG
AAACAAGAAGACCTGTCAATCAAAAGTCACGTGGTCAGCAACAGCAGCAA
CCGAcatcaaatgaaaaatcaaaatccaaTAAGTCTGATAGATCACAAAA
GCATGATTCAAAAACcgaaaaacatggctcaaaacCAGAATTGAGTGATG
TAAAGTCGCGTTCAAAATACGCCCGCGCGTTCAAAATCGAAACCAAGAAG
CGGACGTGCAACAATGAAGAGAAAATCCATGTTGAAAAACAGGCTATCAA
ATCAAAACCGGTTGTTGAGGAGAAAGAGGAATTTGTTGTGGATGAGAGTC
CGTTCCATTTGAGTCATCTTCCACGCTTTGATCGTTCGCGCGCGGAACGC
GCGTCCATCACATCAATCGAGCGTGTCTCAAATAGTCCTTTACGTACCAA
CAAAGTATATGCAAAAGCACCAAGCCCTAGTCTATCTAACAAGGAATCGA
GCACGCCAAAATCAACTGATGACTTTTTAGATAGTCCGTTTTCTTCTAAA
CCGAGTGATCCATTCAAAGATGTGCGAATAGGAAGTAAGAGCAAGAGATC
GGCAGCTAGTCTAGGATTTGTTGAGGAGGGATCGCGTGAGGATTTACTGA
ACGACGAAGAGAGTTCATGTCCAACATCGATTGAAAACGATCAACTCGAT
CTTTTAAACGAAACGATTGATGAACCAAGTTTTGATGATGGTTATCATAC
ATTGCGGACCGAGAGGAGCGATCCTTGGTCAAACTTAAGTAAAGAGGATC
CATGGTCAAGCTTTGAAACGGAAACATTAAATGCTAATAATAACGCAATA
ACAAAATTGAAATCCACTCCGAATCTAACAATCGATGAAGACATCGAGAA
ATCCGATTTCGATGATGAATCGATTGACTTCATCGATAAAAAACGAATCT
CAGCGATTAAACGTCGATcaaaaaatgcacgatatagtGTTTATCAGCCC
ATGGATACGAAAAATTCAATCGATACTTTTgattcattttccttggggaA
TAAATTTGCTTCGGAAACTACATTGACAAAGGTAGGTATAATATCTTTAA
AAACAATTTAGAAAATCGTTGAATTATATTTAAAGTACAGCACCGTATGT
CTGACTGCCAGGTAGAAAGAACTTCCCAATCTTTGCCTGGATTAAATCCA
GAATTTTGTAGTAGGGGCGGCAAAAAGTAGAGTCGGGTGGAAAGAAAGTT
ATTTTAGAAGTCAAGTCTAAATAAAGGCAACCAGTTGAAGCACCAAAATA
GACACACGATGTGCGTCTGACCAAATGATATTAAACAGAAATCTTTtgac
gagaactaattttgacttttgattaatttttttgggcaaaaattgtgaaa
acattaaaatttgGAGAGAACTAACTGTTACGAGTAAGGATTTTCTTTAA
GTTTTGAATGCTAATTTGGTTCAGTTAATGAAAAATGGAGAATAGAAAGG
CTTTGGATCCGAAGTGATGAgtatttttattagaaagatTCATCGAGTCT
GCCGTTTTACATCAATTTCGATTTTCACCAACtcattttactttatttta
ctAATTCTTAGATACAGCCAGTTTCGGCACGGAACTCAGGAACTATAGAT
CGTAGACGGCGTAGCAAAGACATTAACCGATCAATGACGTTGTATTGGGA
CGGTGCAATGGACACTCCAACAAACCCGGAAAATCTCGTCTTCAACGTTA
GTATGAACGCTAAAATTCAAACAAGTAGTTTTCAAGACACTATCNGGCAC
GGAACTCAGGAACTATAGATCGTAGACGGCGTAGCAAAGACATTAACCGA
TCAATGACGTTGTATTGGGACGGTGCAATGGACACACCAACGAACCCGGA
AAATCTCGTCTTCAACGTTAGTATGAACGCTAAAATTCAAACAAGTAGTT
TTCAAGACACTATCTTACATTCAGCTGCTACAAACGGGAATGTCGATATC
GCCCGATTTTACGTTGAATCCGATCAATATCTGAACGCCCAAAACGGGTT
TAGGAATACGCCCCTTCATTGTGCCATTCTAGGGCGTAAAATGGATATCA
TTGATATTTTATTgactaaaaatttggatttATCGATACAAAATATTGAT
GGAGATACGGCGCTTCATTTAGCTGTACGATCAAACATGGTAGATTTGGT
AGCTAAGTTGGTTGCTAGGgacatgaaaaatattaatttgcaGAATAAAG
ATGGCGACACTGTTTTgcatatttcaatttggcagATGAATGAAAAAATA
GTCGAGTTATTAATTTGCGATGAGCTTAATATTGATATTCAAAATAACTC
GATGGATACTCCCTTACATTTATCCGATAAACTAAACAGCCAATTAAAAT
CAAGAATTCTTGAACAAGCTTTTAAAGGACCAATCGGAAAACACGATCAC
GATCACGTGATATCTTCCGACCAATCAAAAGACAGTTTAGGAGAAGGGAG
CCAATCAGCAAGAAGCATGGATAATGATAAATGTATTGGAAATATCACAA
ACAACAAGGCTGAAACACTCTTACATATTTTTGCCGCACAAAACGAGAAA
GACcttcttgaaaaaatcttaTCTCTAAGATGCACCAAAACAAAACTCAG
GAACTGTAACTCAGAAACAGCACTTCATGTAGCAGTTAGAAACTCAAGCA
TTGACCTGATAGAACCACTCATCAGAGAAGATTTAGAACTTCTCAATATG
GCAGATAGCAATGGGGACACCATCTTACATTACGCAATCAGAGCTAAAAA
CGTCGAATTAACTGAAAAGTTGATCAAACTAGGAATTGACTTGAATCGCT
GTAATAAGCTTGCCCAATCTCCGCTACATTTGTCCATCAGCGTTGAAAAC
ACTGCCATATTGAGACTTCTCCTGAAAAAGAATGCTAACCTATGGGTTCA
AGATAATAATGGTTGTTATCCAGTACACTACATTGCTAAAACACGGAACA
CTGAAATCCTCCAATCATTTGCCGAGTTATTTTCTATTCAACCAATCACC
AGTCAGCATCGACGAAATGACGTCATTCCGCTCcaaagtgacgtcatcaa
tataATGGATATGCTTGATAAAGAAGGGAACAGTCCTCTCCATACATCCG
TTATCGAAAATAACGTTccgttttttaaactttttgtccGAAATGACCGT
ACTCATCTGACgtcacaaaacaaaaatggagACACTGTTTTACACTTGTT
GGCTCGATATAATCGGAACAGATTTCTTGATTTCCTTGACTTGAGCCATG
TCAATACAAATGTACTAAATAACAAAGGACAAACGCCTTGGAATATCGCG
TTAAGCCGTGAATATAGCGATGTAGCGATGTTTCTGTTACAAAACAAATG
GAACTTATCAATGGACATTTGAGAGTGGACATTCCTcacagctgacacac
aacgatgcttcaacgtttttctaatgttcataaccgttcatataacgtta
gatgaacgttaaacaatgtTTTGAGTCAGCTGGAGCTCAGCTACCCGAAA
TCACTGTGATTGCGTTATAAgcctgattttcattttttgataattGTGTG
ATGGTAGTGAAAATCGATTTTGACCAGTGTTGAAGGAAACTGTATTTATA
TTTATTGGAAAAAATTACAACTATACTTATgataataaagaatttcttac
TTAAATGACGTTCcgtcttttaaattttttgagaaaagccTTTATTCATT
TGACAAGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006913-exon-sc0000072-1491911889:703047..703065 | TCONS_00006913-exon-sc0000072-1491911889:703047..703065 | Clytia hemisphaerica | exon |
| TCONS_00006913-exon-sc0000072-1510915933:703047..703065 | TCONS_00006913-exon-sc0000072-1510915933:703047..703065 | Clytia hemisphaerica | exon |
| TCONS_00006913-exon-sc0000072-1575043694:703047..703065 | TCONS_00006913-exon-sc0000072-1575043694:703047..703065 | Clytia hemisphaerica | exon |
| TCONS_00006913-exon-sc0000072-1491911889:706146..707327 | TCONS_00006913-exon-sc0000072-1491911889:706146..707327 | Clytia hemisphaerica | exon |
| TCONS_00006913-exon-sc0000072-1510915933:706146..707327 | TCONS_00006913-exon-sc0000072-1510915933:706146..707327 | Clytia hemisphaerica | exon |
| TCONS_00006913-exon-sc0000072-1575043694:706146..707327 | TCONS_00006913-exon-sc0000072-1575043694:706146..707327 | Clytia hemisphaerica | exon |
| TCONS_00006913-exon-sc0000072-1491911889:707858..710006 | TCONS_00006913-exon-sc0000072-1491911889:707858..710006 | Clytia hemisphaerica | exon |
| TCONS_00006913-exon-sc0000072-1510915933:707858..710006 | TCONS_00006913-exon-sc0000072-1510915933:707858..710006 | Clytia hemisphaerica | exon |
| TCONS_00006913-exon-sc0000072-1575043694:707858..710006 | TCONS_00006913-exon-sc0000072-1575043694:707858..710006 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000072 | supercontig | sc0000072:703047..710006 + |
Blast
BLAST of TCONS_00006913 vs. Swiss-Prot (Human)
Match: ANK1 (Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3) HSP 1 Score: 117.472 bits (293), Expect = 2.457e-26 Identity = 119/502 (23.71%), Postives = 222/502 (44.22%), Query Frame = 1
Query: 1516 NAKIQTSSFQD-TILHSAATNGNVDIARFYVESDQYLNAQNGFRNTPLHCAILGRKMDIIDILLTKNLDLSIQNIDGDTALHLAVRSNMVDLVAKLVARDMKNINLQNKDGDTVLHISIWQMNEKIVELLICDELNIDIQNNSMDTPLHLSDKLNSQLKSRILEQAFKGPIGKHDHDHVISSDQSKDSLGEGSQSARSMDNDKCIGNITNNKAETLLHIFAAQNEKDLLEKILSLRCTKTKLRNCNSETALHVAVRNSSIDLIEPLIREDLELLNMADSNGDTILHYAIRAKNVELTEKLIKLGIDLNRCNKLAQSPLHLSISVENTAILRLLLKKNANLWVQDNNGCYPVHYIAKTRNTEILQSF------AELFSIQPIT-----SQHRRNDVIPLQSDVINIMDMLDKEGNSPLHTSVIENNVPFFKLFVRNDRTHLTSQNKNGDTVLHLLARYNRNRFLDFLDLSHVNTNVLNNKGQTPWNIALSREYSDVAMFLLQN 2985
A+I+T + + T LH AA NG+V I+ ++ + A+ +P+H A G +D + +LL + ++ +D T LH+A VAK++ N + +G T LHI+ + + +++ELL+ +ID S TPLH++ + + L Q P + + + + + ++ A+ + +K N +T LH A +++ K+L L T LH+A R ++ + L+ ++ M G T LH A + V + E L++ N K +PLH+++ N I++LLL + + NG P+H AK E+ +S A S+Q +T +Q +++ L ++ +K G +PLH E +VP + +++ + + + G T LH+ + Y + + FL + N G +P + A + ++D+ LL+N
Sbjct: 262 GAQIETKTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYDAEIDDITLDHLTPLHVAAHCGH-HRVAKVLLDKGAKPNSRALNGFTPLHIACKKNHVRVMELLLKTGASIDAVTESGLTPLHVASFMGHLPIVKNLLQRGASP---NVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMV-KLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMT-KKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHG-VMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKN 756 HSP 2 Score: 104.375 bits (259), Expect = 2.234e-22 Identity = 101/403 (25.06%), Postives = 189/403 (46.90%), Query Frame = 1
Query: 1546 DTILHSAATNGNVDIARFYVESDQYLNAQNGFRNTPLHCAILGRKMDIIDILLTKNLDLSIQNIDGDTALHLAVRSNMVDLVAKLVARDMKNINLQNKDGDTVLHISIWQMNEKIVELLICDELNIDIQNNSMDTPLHLSDKLNSQLKSRILEQAFKGPIGKHDHDHV--------ISSDQSKDSLGEGSQSARSMDNDKCIGNITNNKAETLLHIFAAQNEKDLLEKILSLRCTKTKLRNCNSETALHVAVRNSSIDLIEPLIREDLELLNMADSNGDTILHYAIRAKNVELTEKLIKLGIDLNRCNKLAQSPLHLSISVENTAILRLLLKKNANLWVQDNNGCYPVHYIAKTRN----TEILQSFAELFSIQPITSQHRRNDVIPLQSDVINIMDMLDKEG 2718
+T LH AA G+ ++A++ +++ +NA+ TPLHCA +++ +LL N + ++ G T LH+A R V+ V L+ ++ + K G T LH++ ++ ELL+ + + + + TPLH++ N+ ++L P G H I++ Q++ + ARS+ N + + T LH+ A + +++ +LS + L N + T LH+ + + + + LI+ + +++ G T LH A N++L + L++ D+N KL SPLH + +T I+ LLLK A+ ++G P+ IAK T++L+ + S ++ +HR + V I+D+ + EG
Sbjct: 438 ETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACM-TKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLL-----PRGGSPHSPAWNGYTPLHIAAKQNQ------VEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLS-KQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGV-MVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPL-AIAKRLGYISVTDVLKVVTDETSFVLVSDKHR----MSFPETVDEILDVSEDEG 821 HSP 3 Score: 95.5153 bits (236), Expect = 1.092e-19 Identity = 138/595 (23.19%), Postives = 243/595 (40.84%), Query Frame = 1
Query: 1531 TSSFQDTILHSAATNGNVDIARFYVESDQYLNAQNGFRNTPLHCAILGRKMDIIDILLTKNLDLSIQNIDGDTALHLAVRSNMVDLVAKLVARDMKN--------------------INLQN--------KDGDTVLHISIWQMNEKIVELLICDELNIDIQNNSMDTPLHLSDKLNSQLKSRIL-------EQAFKGPIGK-H---------------DHDHVISSDQSKDSLGEGSQSARSMDNDKCIGNITNNKAE---------TLLHIFAAQNEKDLLEKILSLRCTKTKLRNCNSETALHVAVRNSSIDLIEPLIR----------EDLELLNMADSNG----------------------DTILHYAIRAKNVELTEKLIKLGIDLNRCNKLAQSPLHLSISVENTAILRLLLKKNANLWVQDNNGCYPVHYIAKTRNTEILQSFAELFSIQPITSQHRRNDVIPL----QSDVINIMDML----------DKEGNSPLHTSVIENNVPFFKLFV-RNDRTHLTSQNKNGDTVLHLLARYNRNRFLDFLDLSHVNTNVLNNKGQTPWNIALSREYSDVAMFLLQNKWN 2994
T+ +T LH AA G ++ R V +NAQ+ TPL+ A ++++ LL + ++ DG T L +A++ ++VA L+ K + LQN K G T LHI+ N + +LL+ +++ + TPLH++ + + + R+L E K + H DH I + ++K+ L +A+ D+ C+ + AE T LH+ AA + K+L + K R N T LH+A + + + ++E L++ L L++A G +T LH A RA + E+ + L++ +N K Q+PLH + + +T +++LLL+ NAN + G P+H A+ + E + + E + Q + + PL + + + ++L K G +PLH +V NN+ KL + R H S NG T LH+ A+ N+ L + N + +G TP ++A ++++ LL + N
Sbjct: 74 TTKKGNTALHIAALAGQDEVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVALQQGHENVVAHLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVAQLLLNRGASVNFTPQNGITPLHIASRRGNVIMVRLLLDRGAQIETKTKDELTPLHCAARNGHVRISEILLDHGAPIQA-KTKNGLSPIHMAAQG-DHLDCVRLLLQYDAEIDDITLDHLTPLHV-AAHCGHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNHVRVMELLLKTGASIDAVTESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMT---KKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPH--SPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQAN 660
The following BLAST results are available for this feature:
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