TCONS_00007039 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007039
Unique NameTCONS_00007039
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3017

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007039 ID=TCONS_00007039|Name=TCONS_00007039|organism=Clytia hemisphaerica|type=transcript|length=3017bp
attaaAAGATATACAACAAAAGAAGAATGGACCCGATCAtagttttcact
tttcttttcacAATATCACTGGTCACAAAGGTTAACTCGAGTCCAGCCAA
ATTTTGTCACCCTGGGTACGAAGTTGGCGAGGATAATAAATGTCGCGCAT
GTCAGCCTGGATATTATTCCAAGAACGGGACACGTTGCAAACCTTGCACC
AAATGTCACAAGGGACAAACAGAAACACACAAATGTGAACCCTCGCGTAA
CACGCTCTGTCTCTGTGGAAAAGGTTTATACGAGCGAGATGGTATTTGTA
AAGAATGCACTGATTGTCCAGCTGGAATGTTTCAAAAACGCGATTGTGGA
CACAACTTGAATCGACTTTGCGAAAGCTGTCCTCAGGGTCACTACACGAA
CCATACTAACACGAAGAAATGCATTCCCAAAGTTCATACCACTCCAATCA
CACCGAAAGAATATCATTACCACACGTACGATTGGAAACTCATCATCAGT
CTGGTAGCTTTGGTCAGCATCCTTTGTATCATCCTCGCTATCATCGTCTA
TTATGTTTTCCACAGGAAAAGAAGACAGAGGAATAGAGTCATCACAAATC
ACGCGAACAACAATCACCAGTTTGAAGAAGAAATACCACTCAACTTCGAG
ATACCAGATCACGAAGAACGCCATCAGTTAATGGAGAACATCCCTTATTC
CGTGTTCGAAGATCTAGCTATGAAACTAAATCCTGAAGAGCCCAACAATT
GGCGTAAATTGGCATCACATCTAGGTTTTTCACTtgaaagaattagaaac
attgCTTTAACGCCAAACCAGGCAACACAAGAACTATTGAACGAGTGGGT
GATCAACCCCAACTCTACAGCTTTCGTGCTTCACAACATACTGACTTTTA
TGAATAGGCCTGACGCTGCAGCCATCTTAGAACCACATCTCTACAGGGAA
GATATGTTTAAAGAGGAGATGAACTCAACAGTATAAATGTTCGGAGTTTG
AATGGAGAAGTTAAGACTGATGTTTGGGAAGACTTCGTTTATAGTTTGGT
ACCTAGCTCGTATTACACTCTTTTTAATAAGAGATCTGGATCGATTCTCG
TGTTTTTTCATCATTGGCAACAAATTGGGTGTGCACCTCACCTCTCACTT
TCTTAGTGGATCTTCTCTGGGAAAGAGCTCCGCGAgaatgcaaaaatttg
caaaatattggatTCGGAGTGAAACAAACAAATACGTAAAGTTGAACGAC
TGGGCTTTTTATAAAACGTTTCATATCAATGTATCTTGATAGTTTTGAac
caaaatcttttgtttttcttgataGTTTTGAACcgaaatcttttgttttt
cgaaactttttataggttaaagtgaaattttgttttattttggatGTGTT
TTGCAGAATAATTGTCAGCTGGGTCAGCAACGTTTTCGTCAATCAATAAA
TCTTTGTCCGGAAAGTGGAATCTAAGCTGAAAGGGCTGTATAATTTAAAT
GAGGCAAGTGCTGATTGTGACGTAATGGTCTATAGCTACGCAATTATTAT
ATGCGAGGACACATAGTTTTAGCGAAATGCATTTAGTTAGTTAACTTTAT
CTTTTACTTTATCTTTGAGTGATCTTTTTCGTTTATTTGGATCTTTTTAG
TTTATGTTTGAACCTGTTCAAAGCGATCAGATCAATGACCATGCTAACCA
ACTGCTCTTGACGAAGTGGTAATTTTAAACGTTCCTAATTGTACGTAAAG
CTATGAAAGTACAGCTGACGCTCCCTAATCCGACTTTCGAGGGcaattag
attttcatcgaataagggagcgtatcgaaaagtagagcgtcgtttatgag
agtttcttgttgacagtgaatttcaatattatcgaataatagaacgtcaa
attagagagcgtcaattgtACTAACTTTACAACACAAACCAATTTTAATA
TCGCTTCATCGAAAGGTATATAAAAAATGTTGGGCTAGGAACCAAAAGTG
TATTTTGAGACAGCCAACCACTCCTCAATCACGAATTCTTTCAAATTTGC
AAGCTCATTGTTTGAATATGCAAGGTGAAAATTTTTAGTTCagtttttag
ttatttttaagAGAAATTCACAAAGTTTatatatttctcttttttttgca
aGCAATGTAGATATTGAAAACACAGAACATTATTATAACATGCTACGTAC
TAATTACGTTATACGTGCGTAGTAAGCTCTTCTTATAATATATAAATTAT
ATATGGATTACATAgtgtattatattattttcttacatttttttgcgATG
CTACCCCCTACTGAACAAGTAGTAATAAAATTTTTCGTGTTAATGAACTC
GTTTTGTTTGTCCTCTTCGTTGTCCTTATTGAATTTACTGTTACTCGCCC
AAAATGCCATCTATCATGCCCAAGGGTGTTGGAATTGAATGTTTCCATCT
GCCAAATATTGGTTCAAACAAAGATGATGTCCTTCAACAGGGCAATCCTC
AAAACGAGGCTTTGTGACGTAATCTCCCCAACTGTTGTAGCCTCGATTCG
AACCGCCATCTATCCAATGTTTAGCATGTTTCAATACATCATAACCATAA
TGAGAACGGGCGTATAATCCAGGATTAGGGCGGTTTGGAGACCAGTGATC
TCTCATATGAACTTTAGTGTCTTCACCGATTATTCGGTTTGGCGGGAAAA
CGTTTTTATAAAACGGGTGTAAATTCCACGGCTGATAGAAATCACCTATT
AAAACGTACTCTCCCCATGCTTCTAATCGCCAAGTGTTGCCCCTGACTCC
GATATAACCACATGTCCACTTCGGAGAATCGCCGATTAATCCGTTTGACA
CACTCGCATTCTTCAAGCATGGTTTGTCGATGTCTGTTTTGAAATGCATT
CCTTTGAGCCCGAACTCGTTCTCGTGTTTTAAGAGATCAGTGAAATTGGA
CGCTCGGAAAGCGAAATCTTGGTCGAGGTCCCATGGGAGAGTATCATCCA
ATTTTGTGGCTGCCATC
Run BLAST on NCBI

protein sequence of TCONS_00007039-protein

>TCONS_00007039-protein ID=TCONS_00007039-protein|Name=TCONS_00007039-protein|organism=Clytia hemisphaerica|type=polypeptide|length=319bp
MDPIIVFTFLFTISLVTKVNSSPAKFCHPGYEVGEDNKCRACQPGYYSKN
GTRCKPCTKCHKGQTETHKCEPSRNTLCLCGKGLYERDGICKECTDCPAG
MFQKRDCGHNLNRLCESCPQGHYTNHTNTKKCIPKVHTTPITPKEYHYHT
YDWKLIISLVALVSILCIILAIIVYYVFHRKRRQRNRVITNHANNNHQFE
EEIPLNFEIPDHEERHQLMENIPYSVFEDLAMKLNPEEPNNWRKLASHLG
FSLERIRNIALTPNQATQELLNEWVINPNSTAFVLHNILTFMNRPDAAAI
LEPHLYREDMFKEEMNSTV
Run BLAST on NCBI

transcript from alignment at sc0000073:384562..391326+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007039 ID=TCONS_00007039|Name=TCONS_00007039|organism=Clytia hemisphaerica|type=transcript|length=6765bp|location=Sequence derived from alignment at sc0000073:384562..391326+ (Clytia hemisphaerica)
attaaAAGATATACAACAAAAGAAGAATGGACCCGATCAtagttttcact
tttcttttcacAATATCACTGGTCACAAAGGTAAGAACAATTTCTTCATC
TTCCCATTTCAAGGTCCATCCAAAATGAAGGAGAGGAGAACTACGGTAGA
AtactctttaaaaatttgattcCTCTGTATCAACCAATACCTTTCTCCGT
GTTACCCCTGTATCCTTTGATGCACCCCTGTCTCCCCATAACAGCCCTGT
CTTCTTTTAAATTCTTAAATTGTACAGGTGCATATTCATGACACCACAAT
ACTGTTTTTCTAGATTTGCATAACCCTTCACAGCTCTTTGAGGTCCTAAC
TTGAACATACAGGGATAAGGCTACATTAccatttattttttatcaggtca
aatcaaaaaattaatataGGAAATTTGGGAAGTGTCAGTATTGTCTAATT
TCATTGTGATATTTACTCACTCTTCTGACTCTACAAATTTCTTGTTTGCC
GATACCAAAGTCACGAGGATTATTTCGCGCCAAAAAGACATCATCGCTCT
TACCCAGTCTCTTCAAACATCGATGGAGAGCTCAATGATGGAGTTTTAGT
GACAACTACTTTAGCTTTTTCGTCAGTCATGACACTCTGTGACAGTGCTT
TATCTTATTTGTTAATCATGGCACTCCACCGCAGTGTGTTTAAATGTGGC
GATCTTTAATAGTAAACTAAATATCAACTGCGTTTTGAAGCTATGGTGTT
TTTAGAAAATTCCTCCTATTTTTCTGTCATCGAATTAAATCAGCTATATT
GCCACGCATCAGTCTTTTAAGTGGAAATTCGAATAAAATCACCAGCGTTT
TCACGAGCAACCTTATGTCACAAACTGTAATGCTAGGAAAGGGACACCTT
TTAGGAACCTTTGTTACTGGTCACTACTTTCTGTGCAAGCTTGTAAGATT
TTCCTGCCTCTTTTAAGATGCCTTAACCCTTCATCCATCTTAGCAacatc
aatattttgaaatgttatgAAAAAGAAGCGCCAAAAACTCCTTGCCCAGT
TCAAATAAACAAGATCTCAAACTACAACATGCTTCGACATGAAATCCATT
AAAAATGCGCGGGAAAAATATTTCCGCTGTCTGTCTGTCATAAAGTGATA
TGTTGAAAAGACAAGACAAGATATTTTAATCAACTTCTCGTTTTACAAAA
TATGATTCTAATCTGTATGCTTAAATAGAATGATTTTGACATCAGTATAT
TGTACCCGCTTTCAAAGTCTTgtccaaaaaaaatatttctgaatCTTCCC
AAAGGcttactttctttttgttattgcaGGTTAACTCGAGTCCAGCCAAA
TNTATTTCTGAATCTTCCCCTATCAAATAAACTTTTTACCCACTTTCTTT
TTGTCATTACAGGTTAACTCGAGTCCAGCCAAATTTTGTCACCCTGGGTA
CGAAGTTGGCGAGGATAATAAATGTCGCGCATGTCAGGTAGAATAGCCTC
CGTACAATTTTGTTGTGCTTGAAGCACACACTACATAATATAAAATACAT
TCGAACTTCTCGACTCTCGAATGTCTCGATAATTCAAACAACTCTTTTGT
CCCTTCAAATTCTCAAACCTTTTAAACGACTCTcgttcaatgaagtataa
gcccgaaggcctagaagtcaatctccttggtaggatttgaagccaacaaa
tcctaccaaagttgcgcggccttgagcggatcgcctggtttttacacaaa
tgacagattgaaactaaaatttaccgctaaatttcgaattgctagattca
atctgtcgtcaaaaatgcggcgcattttttaaggcttcactttttcttgc
ctgagaaaggttagagattgaactttagcccttcgggctttaaactcaat
gctctCGTTCCCCTCTTTAACTTACAGAGAAGATAAGaccatctttttta
aaaaatatttttttcatgataGGCTCTTCGCTTTTACACTTTGAGGAAAa
gaatgatgacagtgccgaaCTTTTTGTCATTTAGTTCAACTTTTACTTTC
TAGCCTGGATATTATTCCAAGAACGGGACACGTTGCAAACCTTGCACCAA
ATGTCACAAGGGACAAACAGAAACACACAAATGTGAACCCTCGCGTAACA
CGCTCTGTCTCTGTGGAAAAGGTACGTCACTCTTTGTTACAACCGAAAAA
TATAATGTAAAGACGTTGCTGGAACTTTTAAagagtttttgaaaattaga
aacGCCTCAGATGCAATGGATaagccaaaaatattttcttggaGATTCTA
AGGCTTAGTTTTAGGACTTTTTTATCGGGAACTtctaaaagttaatctga
aacaCAATATAATTAGGTTGTCTTTTTGTCTTTCCAACAGGTTTATACGA
GCGAGATGGTATTTGTAAAGAATGCACTGATTGTCCAGCTGGAATGTTTC
AAAAACGCGATTGTGGACACAACTTGAATCGACTTTGCGAAAGCTGTCCT
CAGGTAAGAAGATGGTGCATTTTTCCTCATTGCTTTTGAATCTATTCGAA
TCTTTGACTTATGTGGATTAGAATGCTGATGTTAGTGCGATTGCcggagt
ttttcttttgattttatgTTACCATTCAGTATCTAGGATATCTAATTTAA
TCTGAAGAATATTGAAAATTCATCTATTTTTCCATCACGTTTCAGGGTCA
CTACACGAACCATACTAACACGAAGAAATGCATTCCCAAAGTTCATACCA
CTCGTAAGTTGATTTTGTACCACTCTTATGTTCTTCCTATTAcgagaatg
aaaaaaattgtaattctAGCCATGAGGAACTACATAATTCGAATCATCGG
GACAGAAAGACAGGGGGTGTAAATATTAGGTGCTAAGTTGAATCCGATGT
GGAAACCCCCTGATAATTTCTAGGAATGGTGACTGGTTCTTTCAATACTG
CTTGCCACTTGGCGGGACAAAGTTCTGTGAAAGAGTTATCTTcgtttgat
ttcaaaatttttccattcTTGTGTATCAACCTTGTTAacaactttgaaac
accctgtCTCCGTGGCCTGGGGAGAATTTTcttagccagtggggataaat
tAACAAAGCAAAATTAAAATTGGCATTTCAAATGTTATTCTCTTCAGTTC
AGTGATTTCCGAAATTGTTATGTTATTCCAATTTGGAATGAGACTCCAGT
GTAGATTCTCAATAGAGATGAAATCTCTTGGGTAACTTAAAATCATCTTC
CATTCCTTTGCACAGCAATCACACCGAAAGAATATCATTACCACACGTAC
GATTGGAAACTCATCATCAGTCTGGTAGCTTTGGTCAGCATCCTTTGTAT
CATCCTCGCTATCATCGTCTATTATGTTTTCCACAGGAAAAGAAGACAGA
GGAATAGAGGTGAGgatcaaagaaaaaaatcagttttcaatAATATTTCC
GGCCGTACTTGGTTATTAATGGAGTTCTTCTGCTGTTccaagctctagtt
tagacagccGACTTTCTACCCTGTccattctaattgttagagtagggaGA
AAAAGCGCACAAAGTTgggttaaaatctttgcttggaaaagtttgaaaga
agacattgcattggcGTCAAAAGAGGACAATGCATTGAATTTAGACATCA
CATATTATGTCCATTTAAATTCATAATTAGAaaaggcagggcgaaaagtg
ggccgtataaactagagctaagagcTCTCGCTTTCTAGGGGTTCGAATGT
ACAGTTGGTTGCGGTAAATCTGAATTTTACGGCTTTTGCTCTGaggtttt
attttaaattatggATATTGGTCAATGGGTTTAAATTGTATGTATAAGCG
TTGGAAAATCATATTACAGTttacactctctaattcgacattctactatt
tGATACACCCCATTAATCGATAATATCGATGTCACCGTCAACGATAAACT
ATCATAAACGACATTCTCTTATTCGATGAATATCCAATTCCCCttcaaaa
tcgaattagagagcgtcaactgtatactCCCCTTTCCCTTATCAACTAGA
ACAATATTCAGAGAACCAATAACTGATCTCTATAATTTCTTCTGTAGTCA
TCACAAATCACGCGAACAACAATCACCAGTTTGAAGAAGAAATACCACTC
AACTTCGAGATACCAGGTAAATACTTATCACCCAATTTAGCAATTCATGG
TAGGTACCACTGCAATGAcatcacgaaattatgcaacttttctgtttgtt
tttttactatgtttaagtgacgtattgggtggaaaattttcagaagaCTC
TCTAGTGGTGTACATCATGAATAGTCACTTCCAAGAGATTTTACTTTAAT
GAGTTTGTACGTTACCTCAAGAGCTTTTGGCCTgacaaatgcttttcttg
tttAGATCACGAAGAACGCCATCAGTTAATGGAGAACATCCCTTATTCCG
TGTTCGAAGATCTAGCTATGAAACTAAATCCTGAAGAGCCCAACAATTGG
CGTAAATTGGCATCACATCTAGGTTTTTCACTtgaaagaattagaaacat
tgCTTTAACGCCAAACCAGGCAACACAAGAACTATTGAACGAGTGGGTGA
TCAACCCCAACTCTACAGCTTTCGTGCTTCACAACATACTGACTTTTATG
AATAGGCCTGACGCTGCAGCCATCTTAGAACCACATCTCTACAGGGAAGA
TATGTTTAAAGAGGAGATGAACTCAACAGTATAAATGTTCGGAGTTTGAA
TGGAGAAGTTAAGACTGATGTTTGGGAAGACTTCGTTTATAGTTTGGTAC
CTAGCTCGTATTACACTCTTTTTAATAAGAGATCTGGATCGATTCTCGTG
TTTTTTCATCATTGGCAACAAATTGGGTGTGCACCTCACCTCTCACTTTC
TTAGTGGATCTTCTCTGGGAAAGAGCTCCGCGAgaatgcaaaaatttgca
aaatattggatTCGGAGTGAAACAAACAAATACGTAAAGTTGAACGACTG
GGCTTTTTATAAAACGTTTCATATCAATGTATCTTGATAGTTTTGAacca
aaatcttttgtttttcttgataGTTTTGAACcgaaatcttttgtttttcg
aaactttttataggttaaagtgaaattttgttttattttggatGTGTTTT
GCAGAATAATTGTCAGCTGGGTCAGCAACGTTTTCGTCAATCAATAAATC
TTTGTCCGGAAAGTGGAATCTAAGCTGAAAGGGCTGTATAATTTAAATGA
GGCAAGTGCTGATTGTGACGTAATGGTCTATAGCTACGCAATTATTATAT
GCGAGGACACATAGTTTTAGCGAAATGCATTTAGTTAGTTAACTTTATCT
TTTACTTTATCTTTGAGTGATCTTTTTCGTTTATTTGGATCTTTTTAGTT
TATGTTTGAACCTGTTCAAAGCGATCAGATCAATGACCATGCTAACCAAC
TGCTCTTGACGAAGTGGTAATTTTAAACGTTCCTAATTGTACGTAAAGCT
ATGAAAGTACAGCTGACGCTCCCTAATCCGACTTTCGAGGGcaattagat
tttcatcgaataagggagcgtatcgaaaagtagagcgtcgtttatgagag
tttcttgttgacagtgaatttcaatattatcgaataatagaacgtcaaat
tagagagcgtcaattgtACTAACTTTACAACACAAACCAATTTTAATATC
GCTTCATCGAAAGGTATATAAAAAATGTTGGGCTAGGAACCAAAAGTGTA
TTTTGAGACAGCCAACCACTCCTCAATCACGAATTCTTTCAAATTTGCAA
GCTCATTGTTTGAATATGCAAGGTGAAAATTTTTAGTTCagtttttagtt
atttttaagAGAAATTCACAAAGTTTatatatttctcttttttttgcaaG
CAATGTAGATATTGAAAACACAGAACATTATTATAACATGCTACGTACTA
ATTACGTTATACGTGCGTAGTAAGCTCTTCTTATAATATATAAATTATAT
ATGGATTACATAgtgtattatattattttcttacatttttttgcgATGCT
ACCCCCTACTGAACAAGTAGTAATAAAATTTTTCGTGTTAATGAACTCGT
TTTGTTTGTCCTCTTCGTTGTCCTTATTGAATTTACTGTTACTCGCCCAA
AATGCCATCTATCATGCCCAAGGGTGTTGGAATTGAATGTTTCCATCTGC
CAAATATTGGTTCAAACAAAGATGATGTCCTTCAACAGGGCAATCCTCAA
AACGAGGCTTTGTGACGTAATCTCCCCAACTGTTGTAGCCTCGATTCGAA
CCGCCATCTATCCAATGTTTAGCATGTTTCAATACATCATAACCATAATG
AGAACGGGCGTATAATCCAGGATTAGGGCGGTTTGGAGACCAGTGATCTC
TCATATGAACTTTAGTGTCTTCACCGATTATTCGGTTTGGCGGGAAAACG
TTTTTATAAAACGGGTGTAAATTCCACGGCTGATAGAAATCACCTATTAA
AACGTACTCTCCCCATGCTTCTAATCGCCAAGTGTTGCCCCTGACTCCGA
TATAACCACATGTCCACTTCGGAGAATCGCCGATTAATCCGTTTGACACA
CTCGCATTCTTCAAGCATGGTTTGTCGATGTCTGTTTTGAAATGCATTCC
TTTGAGCCCGAACTCGTTCTCGTGTTTTAAGAGATCAGTGAAATTGGACG
CTCGGAAAGCGAAATCTTGGTCGAGGTCCCATGGGAGAGTATCATCCAAT
TTTGTGGCTGCCATC

Coding sequence (CDS) from alignment at sc0000073:384562..391326+

>TCONS_00007039 ID=TCONS_00007039|Name=TCONS_00007039|organism=Clytia hemisphaerica|type=CDS|length=7680bp|location=Sequence derived from alignment at sc0000073:384562..391326+ (Clytia hemisphaerica)
ATGGACCCGATCAtagttttcacttttcttttcacAATATCACTGGTCAC
AAAGGTTAACTCGAGTCCAGCCAAATTTTGTCACCCTGGGTACGAAGTTG
GCGAGGATAATAAATGTCGCGCATGTCAGCCTGGATATTATTCCAAGAAC
GGGACACGTTGCAAACCTTGCACCAAATGTCACAAGGGACAAACAGAAAC
ACACAAATGTGAACCCTCGCGTAACACGCTCTGTCTCTGTGGAAAAGGTT
TATACGAGCGAGATGGTATTTGTAAAGAATGCACTGATTGTCCAGCTGGA
ATGTTTCAAAAACGCGATTGTGGACACAACTTGAATCGACTTTGCGAAAG
CTGTCCTCAGGGTCACTACACGAACCATACTAACACGAAGAAATGCATTC
CCAAAGTTCATACCACTCCAATCACACCGAAAGAATATCATTACCACACG
TACGATTGGAAACTCATCATCAGTCTGGTAGCTTTGGTCAGCATCCTTTG
TATCATCCTCGCTATCATCGTCTATTATGTTTTCCACAGGAAAAGAAGAC
AGAGGAATAGAGTCATCACAAATCACGCGAACAACAATCACCAGTTTGAA
GAAGAAATACCACTCAACTTCGAGATACCAGATCACGAAGAACGCCATCA
GTTAATGGAGAACATCCCTTATTCCGTGTTCGAAGATCTAGCTATGAAAC
TAAATCCTGAAGAGCCCAACAATTGGCGTAAATTGGCATCACATCTAGGT
TTTTCACTtgaaagaattagaaacattgCTTTAACGCCAAACCAGGCAAC
ACAAGAACTATTGAACGAGTGGGTGATCAACCCCAACTCTACAGCTTTCG
TGCTTCACAACATACTGACTTTTATGAATAGGCCTGACGCTGCAGCCATC
TTAGAACCACATCTCTACAGGGAAGATATGTTTAAAGAGGAGATGAACTC
AACAGTATAAATGGACCCGATCAtagttttcacttttcttttcacAATAT
CACTGGTCACAAAGGTTAACTCGAGTCCAGCCAAATTTTGTCACCCTGGG
TACGAAGTTGGCGAGGATAATAAATGTCGCGCATGTCAGCCTGGATATTA
TTCCAAGAACGGGACACGTTGCAAACCTTGCACCAAATGTCACAAGGGAC
AAACAGAAACACACAAATGTGAACCCTCGCGTAACACGCTCTGTCTCTGT
GGAAAAGGTTTATACGAGCGAGATGGTATTTGTAAAGAATGCACTGATTG
TCCAGCTGGAATGTTTCAAAAACGCGATTGTGGACACAACTTGAATCGAC
TTTGCGAAAGCTGTCCTCAGGGTCACTACACGAACCATACTAACACGAAG
AAATGCATTCCCAAAGTTCATACCACTCCAATCACACCGAAAGAATATCA
TTACCACACGTACGATTGGAAACTCATCATCAGTCTGGTAGCTTTGGTCA
GCATCCTTTGTATCATCCTCGCTATCATCGTCTATTATGTTTTCCACAGG
AAAAGAAGACAGAGGAATAGAGTCATCACAAATCACGCGAACAACAATCA
CCAGTTTGAAGAAGAAATACCACTCAACTTCGAGATACCAGATCACGAAG
AACGCCATCAGTTAATGGAGAACATCCCTTATTCCGTGTTCGAAGATCTA
GCTATGAAACTAAATCCTGAAGAGCCCAACAATTGGCGTAAATTGGCATC
ACATCTAGGTTTTTCACTtgaaagaattagaaacattgCTTTAACGCCAA
ACCAGGCAACACAAGAACTATTGAACGAGTGGGTGATCAACCCCAACTCT
ACAGCTTTCGTGCTTCACAACATACTGACTTTTATGAATAGGCCTGACGC
TGCAGCCATCTTAGAACCACATCTCTACAGGGAAGATATGTTTAAAGAGG
AGATGAACTCAACAGTATAAATGGACCCGATCAtagttttcacttttctt
ttcacAATATCACTGGTCACAAAGGTTAACTCGAGTCCAGCCAAATTTTG
TCACCCTGGGTACGAAGTTGGCGAGGATAATAAATGTCGCGCATGTCAGC
CTGGATATTATTCCAAGAACGGGACACGTTGCAAACCTTGCACCAAATGT
CACAAGGGACAAACAGAAACACACAAATGTGAACCCTCGCGTAACACGCT
CTGTCTCTGTGGAAAAGGTTTATACGAGCGAGATGGTATTTGTAAAGAAT
GCACTGATTGTCCAGCTGGAATGTTTCAAAAACGCGATTGTGGACACAAC
TTGAATCGACTTTGCGAAAGCTGTCCTCAGGGTCACTACACGAACCATAC
TAACACGAAGAAATGCATTCCCAAAGTTCATACCACTCCAATCACACCGA
AAGAATATCATTACCACACGTACGATTGGAAACTCATCATCAGTCTGGTA
GCTTTGGTCAGCATCCTTTGTATCATCCTCGCTATCATCGTCTATTATGT
TTTCCACAGGAAAAGAAGACAGAGGAATAGAGTCATCACAAATCACGCGA
ACAACAATCACCAGTTTGAAGAAGAAATACCACTCAACTTCGAGATACCA
GATCACGAAGAACGCCATCAGTTAATGGAGAACATCCCTTATTCCGTGTT
CGAAGATCTAGCTATGAAACTAAATCCTGAAGAGCCCAACAATTGGCGTA
AATTGGCATCACATCTAGGTTTTTCACTtgaaagaattagaaacattgCT
TTAACGCCAAACCAGGCAACACAAGAACTATTGAACGAGTGGGTGATCAA
CCCCAACTCTACAGCTTTCGTGCTTCACAACATACTGACTTTTATGAATA
GGCCTGACGCTGCAGCCATCTTAGAACCACATCTCTACAGGGAAGATATG
TTTAAAGAGGAGATGAACTCAACAGTATAAATGGACCCGATCAtagtttt
cacttttcttttcacAATATCACTGGTCACAAAGGTTAACTCGAGTCCAG
CCAAATTTTGTCACCCTGGGTACGAAGTTGGCGAGGATAATAAATGTCGC
GCATGTCAGCCTGGATATTATTCCAAGAACGGGACACGTTGCAAACCTTG
CACCAAATGTCACAAGGGACAAACAGAAACACACAAATGTGAACCCTCGC
GTAACACGCTCTGTCTCTGTGGAAAAGGTTTATACGAGCGAGATGGTATT
TGTAAAGAATGCACTGATTGTCCAGCTGGAATGTTTCAAAAACGCGATTG
TGGACACAACTTGAATCGACTTTGCGAAAGCTGTCCTCAGGGTCACTACA
CGAACCATACTAACACGAAGAAATGCATTCCCAAAGTTCATACCACTCCA
ATCACACCGAAAGAATATCATTACCACACGTACGATTGGAAACTCATCAT
CAGTCTGGTAGCTTTGGTCAGCATCCTTTGTATCATCCTCGCTATCATCG
TCTATTATGTTTTCCACAGGAAAAGAAGACAGAGGAATAGAGTCATCACA
AATCACGCGAACAACAATCACCAGTTTGAAGAAGAAATACCACTCAACTT
CGAGATACCAGATCACGAAGAACGCCATCAGTTAATGGAGAACATCCCTT
ATTCCGTGTTCGAAGATCTAGCTATGAAACTAAATCCTGAAGAGCCCAAC
AATTGGCGTAAATTGGCATCACATCTAGGTTTTTCACTtgaaagaattag
aaacattgCTTTAACGCCAAACCAGGCAACACAAGAACTATTGAACGAGT
GGGTGATCAACCCCAACTCTACAGCTTTCGTGCTTCACAACATACTGACT
TTTATGAATAGGCCTGACGCTGCAGCCATCTTAGAACCACATCTCTACAG
GGAAGATATGTTTAAAGAGGAGATGAACTCAACAGTATAAATGGACCCGA
TCAtagttttcacttttcttttcacAATATCACTGGTCACAAAGGTTAAC
TCGAGTCCAGCCAAATTTTGTCACCCTGGGTACGAAGTTGGCGAGGATAA
TAAATGTCGCGCATGTCAGCCTGGATATTATTCCAAGAACGGGACACGTT
GCAAACCTTGCACCAAATGTCACAAGGGACAAACAGAAACACACAAATGT
GAACCCTCGCGTAACACGCTCTGTCTCTGTGGAAAAGGTTTATACGAGCG
AGATGGTATTTGTAAAGAATGCACTGATTGTCCAGCTGGAATGTTTCAAA
AACGCGATTGTGGACACAACTTGAATCGACTTTGCGAAAGCTGTCCTCAG
GGTCACTACACGAACCATACTAACACGAAGAAATGCATTCCCAAAGTTCA
TACCACTCCAATCACACCGAAAGAATATCATTACCACACGTACGATTGGA
AACTCATCATCAGTCTGGTAGCTTTGGTCAGCATCCTTTGTATCATCCTC
GCTATCATCGTCTATTATGTTTTCCACAGGAAAAGAAGACAGAGGAATAG
AGTCATCACAAATCACGCGAACAACAATCACCAGTTTGAAGAAGAAATAC
CACTCAACTTCGAGATACCAGATCACGAAGAACGCCATCAGTTAATGGAG
AACATCCCTTATTCCGTGTTCGAAGATCTAGCTATGAAACTAAATCCTGA
AGAGCCCAACAATTGGCGTAAATTGGCATCACATCTAGGTTTTTCACTtg
aaagaattagaaacattgCTTTAACGCCAAACCAGGCAACACAAGAACTA
TTGAACGAGTGGGTGATCAACCCCAACTCTACAGCTTTCGTGCTTCACAA
CATACTGACTTTTATGAATAGGCCTGACGCTGCAGCCATCTTAGAACCAC
ATCTCTACAGGGAAGATATGTTTAAAGAGGAGATGAACTCAACAGTATAA
ATGGACCCGATCAtagttttcacttttcttttcacAATATCACTGGTCAC
AAAGGTTAACTCGAGTCCAGCCAAATTTTGTCACCCTGGGTACGAAGTTG
GCGAGGATAATAAATGTCGCGCATGTCAGCCTGGATATTATTCCAAGAAC
GGGACACGTTGCAAACCTTGCACCAAATGTCACAAGGGACAAACAGAAAC
ACACAAATGTGAACCCTCGCGTAACACGCTCTGTCTCTGTGGAAAAGGTT
TATACGAGCGAGATGGTATTTGTAAAGAATGCACTGATTGTCCAGCTGGA
ATGTTTCAAAAACGCGATTGTGGACACAACTTGAATCGACTTTGCGAAAG
CTGTCCTCAGGGTCACTACACGAACCATACTAACACGAAGAAATGCATTC
CCAAAGTTCATACCACTCCAATCACACCGAAAGAATATCATTACCACACG
TACGATTGGAAACTCATCATCAGTCTGGTAGCTTTGGTCAGCATCCTTTG
TATCATCCTCGCTATCATCGTCTATTATGTTTTCCACAGGAAAAGAAGAC
AGAGGAATAGAGTCATCACAAATCACGCGAACAACAATCACCAGTTTGAA
GAAGAAATACCACTCAACTTCGAGATACCAGATCACGAAGAACGCCATCA
GTTAATGGAGAACATCCCTTATTCCGTGTTCGAAGATCTAGCTATGAAAC
TAAATCCTGAAGAGCCCAACAATTGGCGTAAATTGGCATCACATCTAGGT
TTTTCACTtgaaagaattagaaacattgCTTTAACGCCAAACCAGGCAAC
ACAAGAACTATTGAACGAGTGGGTGATCAACCCCAACTCTACAGCTTTCG
TGCTTCACAACATACTGACTTTTATGAATAGGCCTGACGCTGCAGCCATC
TTAGAACCACATCTCTACAGGGAAGATATGTTTAAAGAGGAGATGAACTC
AACAGTATAAATGGACCCGATCAtagttttcacttttcttttcacAATAT
CACTGGTCACAAAGGTTAACTCGAGTCCAGCCAAATTTTGTCACCCTGGG
TACGAAGTTGGCGAGGATAATAAATGTCGCGCATGTCAGCCTGGATATTA
TTCCAAGAACGGGACACGTTGCAAACCTTGCACCAAATGTCACAAGGGAC
AAACAGAAACACACAAATGTGAACCCTCGCGTAACACGCTCTGTCTCTGT
GGAAAAGGTTTATACGAGCGAGATGGTATTTGTAAAGAATGCACTGATTG
TCCAGCTGGAATGTTTCAAAAACGCGATTGTGGACACAACTTGAATCGAC
TTTGCGAAAGCTGTCCTCAGGGTCACTACACGAACCATACTAACACGAAG
AAATGCATTCCCAAAGTTCATACCACTCCAATCACACCGAAAGAATATCA
TTACCACACGTACGATTGGAAACTCATCATCAGTCTGGTAGCTTTGGTCA
GCATCCTTTGTATCATCCTCGCTATCATCGTCTATTATGTTTTCCACAGG
AAAAGAAGACAGAGGAATAGAGTCATCACAAATCACGCGAACAACAATCA
CCAGTTTGAAGAAGAAATACCACTCAACTTCGAGATACCAGATCACGAAG
AACGCCATCAGTTAATGGAGAACATCCCTTATTCCGTGTTCGAAGATCTA
GCTATGAAACTAAATCCTGAAGAGCCCAACAATTGGCGTAAATTGGCATC
ACATCTAGGTTTTTCACTtgaaagaattagaaacattgCTTTAACGCCAA
ACCAGGCAACACAAGAACTATTGAACGAGTGGGTGATCAACCCCAACTCT
ACAGCTTTCGTGCTTCACAACATACTGACTTTTATGAATAGGCCTGACGC
TGCAGCCATCTTAGAACCACATCTCTACAGGGAAGATATGTTTAAAGAGG
AGATGAACTCAACAGTATAAATGGACCCGATCAtagttttcacttttctt
ttcacAATATCACTGGTCACAAAGGTTAACTCGAGTCCAGCCAAATTTTG
TCACCCTGGGTACGAAGTTGGCGAGGATAATAAATGTCGCGCATGTCAGC
CTGGATATTATTCCAAGAACGGGACACGTTGCAAACCTTGCACCAAATGT
CACAAGGGACAAACAGAAACACACAAATGTGAACCCTCGCGTAACACGCT
CTGTCTCTGTGGAAAAGGTTTATACGAGCGAGATGGTATTTGTAAAGAAT
GCACTGATTGTCCAGCTGGAATGTTTCAAAAACGCGATTGTGGACACAAC
TTGAATCGACTTTGCGAAAGCTGTCCTCAGGGTCACTACACGAACCATAC
TAACACGAAGAAATGCATTCCCAAAGTTCATACCACTCCAATCACACCGA
AAGAATATCATTACCACACGTACGATTGGAAACTCATCATCAGTCTGGTA
GCTTTGGTCAGCATCCTTTGTATCATCCTCGCTATCATCGTCTATTATGT
TTTCCACAGGAAAAGAAGACAGAGGAATAGAGTCATCACAAATCACGCGA
ACAACAATCACCAGTTTGAAGAAGAAATACCACTCAACTTCGAGATACCA
GATCACGAAGAACGCCATCAGTTAATGGAGAACATCCCTTATTCCGTGTT
CGAAGATCTAGCTATGAAACTAAATCCTGAAGAGCCCAACAATTGGCGTA
AATTGGCATCACATCTAGGTTTTTCACTtgaaagaattagaaacattgCT
TTAACGCCAAACCAGGCAACACAAGAACTATTGAACGAGTGGGTGATCAA
CCCCAACTCTACAGCTTTCGTGCTTCACAACATACTGACTTTTATGAATA
GGCCTGACGCTGCAGCCATCTTAGAACCACATCTCTACAGGGAAGATATG
TTTAAAGAGGAGATGAACTCAACAGTATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003936XLOC_003936Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007039-exon-sc0000073-1491911889:384562..384641TCONS_00007039-exon-sc0000073-1491911889:384562..384641Clytia hemisphaericaexon
TCONS_00007039-exon-sc0000073-1510915933:384562..384641TCONS_00007039-exon-sc0000073-1510915933:384562..384641Clytia hemisphaericaexon
TCONS_00007039-exon-sc0000073-1575043694:384562..384641TCONS_00007039-exon-sc0000073-1575043694:384562..384641Clytia hemisphaericaexon
TCONS_00007039-exon-sc0000073-1491911889:385974..386048TCONS_00007039-exon-sc0000073-1491911889:385974..386048Clytia hemisphaericaexon
TCONS_00007039-exon-sc0000073-1510915933:385974..386048TCONS_00007039-exon-sc0000073-1510915933:385974..386048Clytia hemisphaericaexon
TCONS_00007039-exon-sc0000073-1575043694:385974..386048TCONS_00007039-exon-sc0000073-1575043694:385974..386048Clytia hemisphaericaexon
TCONS_00007039-exon-sc0000073-1491911889:386615..386732TCONS_00007039-exon-sc0000073-1491911889:386615..386732Clytia hemisphaericaexon
TCONS_00007039-exon-sc0000073-1510915933:386615..386732TCONS_00007039-exon-sc0000073-1510915933:386615..386732Clytia hemisphaericaexon
TCONS_00007039-exon-sc0000073-1575043694:386615..386732TCONS_00007039-exon-sc0000073-1575043694:386615..386732Clytia hemisphaericaexon
TCONS_00007039-exon-sc0000073-1491911889:386952..387064TCONS_00007039-exon-sc0000073-1491911889:386952..387064Clytia hemisphaericaexon
TCONS_00007039-exon-sc0000073-1510915933:386952..387064TCONS_00007039-exon-sc0000073-1510915933:386952..387064Clytia hemisphaericaexon
TCONS_00007039-exon-sc0000073-1575043694:386952..387064TCONS_00007039-exon-sc0000073-1575043694:386952..387064Clytia hemisphaericaexon
TCONS_00007039-exon-sc0000073-1491911889:387257..387314TCONS_00007039-exon-sc0000073-1491911889:387257..387314Clytia hemisphaericaexon
TCONS_00007039-exon-sc0000073-1510915933:387257..387314TCONS_00007039-exon-sc0000073-1510915933:387257..387314Clytia hemisphaericaexon
TCONS_00007039-exon-sc0000073-1575043694:387257..387314TCONS_00007039-exon-sc0000073-1575043694:387257..387314Clytia hemisphaericaexon
TCONS_00007039-exon-sc0000073-1491911889:387827..387970TCONS_00007039-exon-sc0000073-1491911889:387827..387970Clytia hemisphaericaexon
TCONS_00007039-exon-sc0000073-1510915933:387827..387970TCONS_00007039-exon-sc0000073-1510915933:387827..387970Clytia hemisphaericaexon
TCONS_00007039-exon-sc0000073-1575043694:387827..387970TCONS_00007039-exon-sc0000073-1575043694:387827..387970Clytia hemisphaericaexon
TCONS_00007039-exon-sc0000073-1491911889:388659..388727TCONS_00007039-exon-sc0000073-1491911889:388659..388727Clytia hemisphaericaexon
TCONS_00007039-exon-sc0000073-1510915933:388659..388727TCONS_00007039-exon-sc0000073-1510915933:388659..388727Clytia hemisphaericaexon
TCONS_00007039-exon-sc0000073-1575043694:388659..388727TCONS_00007039-exon-sc0000073-1575043694:388659..388727Clytia hemisphaericaexon
TCONS_00007039-exon-sc0000073-1491911889:388967..391326TCONS_00007039-exon-sc0000073-1491911889:388967..391326Clytia hemisphaericaexon
TCONS_00007039-exon-sc0000073-1510915933:388967..391326TCONS_00007039-exon-sc0000073-1510915933:388967..391326Clytia hemisphaericaexon
TCONS_00007039-exon-sc0000073-1575043694:388967..391326TCONS_00007039-exon-sc0000073-1575043694:388967..391326Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007039-proteinTCONS_00007039-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000073supercontigsc0000073:384562..391326 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
30.9672	30.2946	9.48357	7.06719	32.2617	24.9541	22.0393	24.8138	18.9502	31.0299	20.7387	18.0129	20.8549	22.0342	12.8272	11.8431	18.691	25.5272	21.3012	20.1525	22.7091	24.3102	24.9168	25.7741	37.5342	34.3584	20.4943	17.786	10.9652	12.3575
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001368TNFR/NGFR_Cys_rich_reg
IPR000488Death_domain
IPR009030Growth_fac_rcpt_
IPR011029DEATH-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007039 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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