TCONS_00007180 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007180
Unique NameTCONS_00007180
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1802

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007180 ID=TCONS_00007180|Name=TCONS_00007180|organism=Clytia hemisphaerica|type=transcript|length=1802bp
AGAAAAATAACATTTCCAAATAACCTTTATATGAAAgagtttttgctgat
tttgaaaACTGGGCTTCTTGGTAAAACTTGAAGGGGAAcagaaataaaga
agaaaaacacaaaatgaTGTTATCGACTTGTAGAAGGCTGAATGTTCTTt
tccaaaccattttgattggGCATATAATATTCCAATGCAGTGTCAAAGCC
AGCCCAGTTGGTACTATCACCATTGGTAACATCAGTTGTTTACATGACAA
TCTCCATGGTGATATAAAGCATACAATAAATCCAAAGATGGCGTCCTCAA
GTGTggtgtattttaaaattaaaattgtcagAGGGAACCAGACTTTCAAG
GAGGTTGAACTAGCCGGTGATCATGTTGTTTTACGAAAGCAATGTCCAAA
GGCTGGTGAATGCTTGACGTTGTCAGCCAATATCGAAGTTATCAAGAACA
TCACGCAAAAATACGAATCAAAGTCTTCGAACGTTGTCAAATTCTGTGAA
GaacatGCACATTCCTCAAAAGAAACACCGATGCACATCAAGACAAGCCA
AACAATGGGCAAAGAGATCGTCATTAACGTTCATTCGAATAGTAGCATGG
CGCATGCGCATGGACAACATTATTCAAGATTTTATGTTGCTAAGATACAA
TACACTAATAAAACACAGACCATTCTGAGATTCAATGGTATTTTCAAAAC
CAAGAAACTGAAGATGGACGAATGCGTTCAAGTGATGTTTCGTGTTGGCT
TTTTATTATCTTATGAAAAAACATCATCCAgagtgaaatattccaaatgG
AATACACAAAAGACTTACTGTGTCACTGTAGATGAAGaTACGAATTTACA
ATATGAAGCGGAGAGAGAAATTTTACACATTGTGCTAAGTTGTACCATAC
CAGCTTTAACCATCGTTGCGCTCATTGTGTGGGCCTTCATTTCTTATTAC
AGGAAAAGAGGTGTGGACGAAGATTTACAGATTTCGATTCAATCTTTCGA
AGAAGGACTGCTCGATTCAAACAGAAGTAGTCACTGTTCGCCAAACCGAG
GAAACACAAACACTCTTCTTCTCACTGAGCAAGCACCAAAAAAGAGTGGA
AATGATGATAAACTTTACTCCTCAAACGAAGAAGAACTGGGAAGGATTCT
ATCTTGCTCCGGGACCGACGCTGATCTAAGAGAAAGCAAAAAAGTCGACT
TTTGAGTATAGTGGCATTTTTTGTATTGCTCTGGGACCGACGCTAATCTA
AGTAAAGAGAAAGCAAGAAAATTGAGTTTTGAGCCAGGGACCTTACAGTA
AAACCAGTTCATTactgaaaaaatcaaatgagAAGATATTATATTTCTCA
AATAAGGAAGAACTTGTGGAAGGATTTCATGCGCTGCTAGGATGTGACCG
TCACAAATATGCCATAACACAGTTTCATTTTGAGTCTTAAGCAAAACAGT
TTTTAGAAATTCACCCCGAGAAATAACATTATTTCTTCGAACAAAATGGA
TAAGAGAGACAAAAATTTGGACTTTAAGACTCTTACTAACCATGTTGAAA
GTGAACAATTGGTACACAATCGttttaaaagccttaaaaccacGTCACAA
ATATATGCATGAAAGAAGGCGACGTCACCACAAATATATAAAGGAAAACT
AAATCGGTAGATTCAATGTTTCACCATAAGGAAATTTTAAGACACTTTTc
acccacagatatctaagcccgaagggctagatttgcaactttaagctttc
tccagcaaaaaaaagtgaagcaaaaatttgactttttaaatttcgtgccg
at
Run BLAST on NCBI

protein sequence of TCONS_00007180-protein

>TCONS_00007180-protein ID=TCONS_00007180-protein|Name=TCONS_00007180-protein|organism=Clytia hemisphaerica|type=polypeptide|length=363bp
MMLSTCRRLNVLFQTILIGHIIFQCSVKASPVGTITIGNISCLHDNLHGD
IKHTINPKMASSSVVYFKIKIVRGNQTFKEVELAGDHVVLRKQCPKAGEC
LTLSANIEVIKNITQKYESKSSNVVKFCEEHAHSSKETPMHIKTSQTMGK
EIVINVHSNSSMAHAHGQHYSRFYVAKIQYTNKTQTILRFNGIFKTKKLK
MDECVQVMFRVGFLLSYEKTSSRVKYSKWNTQKTYCVTVDEDTNLQYEAE
REILHIVLSCTIPALTIVALIVWAFISYYRKRGVDEDLQISIQSFEEGLL
DSNRSSHCSPNRGNTNTLLLTEQAPKKSGNDDKLYSSNEEELGRILSCSG
TDADLRESKKVDF
Run BLAST on NCBI

transcript from alignment at sc0000074:121297..132704-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007180 ID=TCONS_00007180|Name=TCONS_00007180|organism=Clytia hemisphaerica|type=transcript|length=11408bp|location=Sequence derived from alignment at sc0000074:121297..132704- (Clytia hemisphaerica)
AGAAAAATAACATTTCCAAATAACCTTTATATGAAAGAGTTTTTGCTGAT
TTTGAAAACTGGGCTTCTTGGTAAAACTTGAAGGGGAACAGAAATAAAGA
AGAAAAACACAAAATGATGTTATCGACTTGTAGAAGGCTGAATGTTCTTT
TCCAAACCATTTTGATTGGGCATATAATATTCCAATGCAGTGTCAAAGGT
ATAATATTTGTTTTATTCAATATTCAAATTCTTGATATGCGTAAGTCATT
TTTCTAGCGGAAAGACCCTAAAAAAGCCGGGATTTGAACCCTCTCTGTTA
CTAAAAATAGAAACACAGAAGAGGTCAAAATCTGGCTTTTTTCGAGCGCT
TCCGTTAGGAAACATTACGTCATCTTGACTTACGCATATCAAGAATACAG
GCTAGAATTTAGATTGGCAAGGAGACGACAGAAAATTTTGAAAGATATAA
TCCAGCCTGGTCTAAGCTTTATGTACGTTACTGATGGAATATCTAGCGCT
CCTAGTACGCAGGGGACGAGGTTGAAAATCACCAGGAACTTTTTTGATCA
ATTCACGCTAATGCAGCAATATTTGAATCATTTACAGTGTGAATAATTTT
ATTAGTTTTTTGGAATTTTATCATTTTGCGAATTTTGAATTTCGAAAATG
GAAGAACATCAGAAGACATTGGTGCAGAATTTGGGAGAAACGCCGTTGAT
TCTAAGAAAACAATTAAGTTCATGCTCCAAATAGGAAGGACATAAAGTAT
CGAATTTAAAATTGTATTTGAAAATTGAAATAATCTTAAGATTAAAAGTA
GAATATTTTTCAATATAAGAAATATTGAGCACGTCACCTGCTATAAATCC
GTTTCACACAGCTGTGTCTCTTTTGACGAGTTTAGTCGTCGTGCAACGAG
TTTATCAAACGAGAATACTCGGTCTTCGTTATCGGTACTCGAGCTTCGTT
CTCGTTTCAAATGTCTAACGAAAACGTCGTTCGGTAGCTGTAACGACGAA
CTTCGGCCTTTTAATCGCCGACGTTCTAAACGATCCATATCTTCCGTTTC
GGTTAGCGTGTTATCCCGATTTCCATTCCTTCTTGCAGTCGAATTATCCC
GATCTTCCGAATTGGGTAATAAATCATTATTACTTTGTTTCCGATTATTA
TGTCTTTTGGGACTTGGGGTCAACCGATTTTCGAGTCCACATAATATCTG
GTCATTACTTTTGGTTCTATATCCTTCTAACCGATTGGATGGAAAAGAAA
TAACATCAGTAGAATCAAAGTCTAGAATTGGGGTCGATTTATTCTGTTTT
TGATTTGATAATTTTCTAAACACGTGATCAACCGATTTCTTAGATAATCC
AGTTTTCCGATTTTCTTTCCCCGATTTAATATTCGGAAGAGATGCGGATC
TAGAAACAGGTTTCTTGTCTATAAAGTTATCAGTACTTTGACTTCTTTGT
CTCCCCGGAAAATCATGTTTAGTGCTGTACCGTGATTTCCGTGTCTTGAT
CGTATTTTGCATCTCACGGAACGCGTTCCCGATTCGTGCCACGGAAGCTT
TACGTAATGAAGTTCTGGAATTTGATATTTTTCTCGATTCTTTAGTTTTC
AATGAATAAGTTGTATTATTACAGTTGCTGCTCTGACTCTTCAGACTCAT
TGGACTCTCATCACCCCGTGGAGTGTTGAAAAATATCTCCTCTTCATGCG
TATTGTCAATCTTGATTGGGCTAGTCTGTGTATCAGCCTTATCATCGTAG
TCTGTAACACTCAATTTCAAAGTCTGCGCAACTCTTGATGTATATGTGTA
TTCGTTAGAACTGTAAACGTACTCGTTTCTATTACCATCTGTAGTAAAGT
TAGGTAGACTGTCTTCAGATTTAACGTTGGAACGGTCTGGTAGACTACTC
TGTCGGATTAGAATTCCATCCTTCATTTTGGCGACCTATTGGAAAAGATA
AAGGAATGTATGAATTAATTCATCATGCTAGAAAATTTCAATACTTCCAA
GTTTCTCAATCCCGGCCAAGAAAAATCTTTGATTGGAGTTTTTTGAAAAG
TGGTACCCTAATTGCGGCACTACTCAATAGCGGTGTAAATGCATCGACAG
CGCTAGATCTACGTTCCTCTGAATATTTTTGATGATGTTGCGCCGTGTTA
GACGTTAACTTTTAACACTGCAATGGCTTCTTTACGGGTACCACTTCAAA
AAGAACTTCGATCAAAGATGGCGGATATAGATTGGTCCAGGGGTATATAA
AGGTCAGTGCCAAACCGAGCAACAAGGGCTGTTTTTGACTTCATGTTATA
TTTTGAGCTGTGAAATATGTCCCACATGCTTCAAATACAACAAACACAAA
TATTAGAACTTTTAGCAACCGAGATCGAAAAGTATGGAGAGAAAAAAGTG
TTTAACTTCACACATGTGTTTTCTTCATCTAAAATGACTGGAAAGAAATC
ATCAACGTATTTTTAGTACCAAAACAACTAGTATTGCGAGAAAGTCAATA
TATAAACAAACACGATGCCAAGTGAAGCACATACATAAGTCATTCTTTTA
CAATCTGAACAGCTTTATCATTTTTGTAATGGAACTTAGAGCGGAGAATG
AGAATTGATCAATATGGCCTGACAAACGCCTTAATATCTTAATTAAAAAG
CAATGCTAAGCCTATAATTATCCAATTAAGCTCTGAGAGCTAATATTGAT
AATGCATCACGTTATAAACACTGCTTGATTAACATTTTTCAAATAGAAGT
TTCTATTATAAGGTTCCGAATGCATCCCTGTGCCAAAGTCACAAGTAAAA
GGGATTCTTTGCCAACGGCATATTTTGACCACTTCAGAGTCTTTCCAGTG
CAACAGTGGTAGCAAAAGATGTATACTCAAATTATTTTAGGGAGTGGAAT
TGCTTCCTTAAAACGAATAGTCACGAAGAAATACTTGTCATCATCAATTT
TGCAGTAACCACCCTTAGAGAACTCTCCACCATCTCAAATTCCCTCTTAG
AAAGACATTAATGTTCTGCAGCCAAATCATCCCTTTTCTTTACATCCCCG
ACTGCAGAAGAGTTCTCACAGGGTCACTTAAGACAGGGCTGTTTGGTGTT
GGTTAGGAGTCAAAGAACGTATAATTGATTGTAAATATTATACAATATTG
CATCATATTAGTTAGAAATTGTGGTGCAAACAATAAAATCGGAAATATTA
ATCATTCTTTTTTTAAAATCCATCTAAAACACCTTCAAATCTCACAAAAT
CAAGTTCTTATAAAACTTGAATGATCTGTCGTGATCTAATCACGATATGA
TTAAAGCAATCTTAGAGTACCGTTAGATAAATTGACTTAATTTAAAGTGA
CTCGAGGATTAAATAACGGTGCCTTGTGCTATCTTTAAAAGGGAGCTAAG
GTGCCAACTCAGCTCAAAGATTGGTAGATAAATTGAGATAAGCATGTCTG
GTCGTCTCAGACAGTTTGTTGTCTTTAGTACAAAAAAAGAATTTTTATTA
TTTTTGCTTTATCGAATCATGTTTCCTAAATTAAAGCTCCTTATATCAGA
CGAGTTATATTACAACACTACGTCTTATGTATAGTAAAGTTGGCATTACA
TTGACTGGAGTATTTTTGGAAAGTTTAGTATGAAAATGACGTAATGTATG
TTTAAAGAACCATTTTAACCGATCCTGATAATGAGATTTGTCTCAACCAG
CCCAGTCATAAATTCAACATGCTGTTCTAGCTATCTGTCGTCACAGTCTG
TATTGTAAGGAAAACCTAACACGTGATTTACTGATGGTTCATTATACTAT
GGTTCTTTATGATGAAATTGTCTCAACTAACCTAGTCATTCCTTAAACAT
GCTTACTTTGAAAGCGCTGTCAAGCCACCATTATGAGAATATTTTCTCTA
TAGCTTTTAATAAAGTATGCAGGATATGATTTAATTGCTTTTTGAGCTAC
CGGATATTTGAGGATCTTTGAGTGTTGTAGTTAAGTCTGCCTTTAAGATT
TTAAGAATTATAAAAACCTCTCAACAGAAAAAACAATGCGAAAAGTTTCT
CCAACATCTATCGTAAATACATCCCTGTGTCACAGACTGCCAGACTGACT
GGGCAAAAATTTCGTCCCCGGTGGGAAAATACCTTCGAATTTCAGCCTCA
CTAGGAAATTGACTTCGACTTCATCCCCATTCGAAATTCAATGTTTAAAA
ATTCCACACAAAAACCATTCCCATTGGATCTTTTAACCAATAGAATTTCT
ATCCCATTGGGATTTTAATAGGAATTTTTATCCCTGCTGACGAAAAAAGC
TCCACCGGGGTTGTGAGACAGGGGTGTGTAAAATGAAACAATTTTCAGTG
AGATGATAACGAAAACTTTATTTTGGGGATGAAAATTATTAAATCTCAGT
CACTTGATTTAAGGTGGCATGAATCAATTTCTTCGGAAGAATCACTTTCC
AAATGTACCAAAAACAAAGCCTATCATATAATTCCCTATTTTTTACATAT
GTTTTTTTTGAAGTTTAAAAACTCGAGAAAAAATTCTAATTAGGTTTGAA
AAAATATTCTGAATTTAAAAGTTTTGAAATTAAAGACTGCAATCATACCT
TCTTGCGTATTAGCTGGATCATTGCTCTTGAATGTTGTGGTTTTCTTCGT
CGATAGTTTGATGTTTATAAATTAGAATCTATGATTTGATAGAAATTCTG
GATTTAAATGTCAAACACAATTCATTCTAAACACAAAGTTTTGTATTAGT
TATAAAGTTTTTGTAATGTATGAAAACATACTTAGCATAAAAAAATCCAA
AGATAGAATGTATAGAACACGAGCTTAAGTCATCGCAGCAGTTTTTCTAA
GTTAAGCAACAGAATCTTACACTAAGAACGCTTCATTTAAAGTTTATTAA
AAATTTGGAGATTTAATATTTCACAGAAAAGTGCTAGCAAGGGGTATTTC
GGGTCCCATATCTTCCGAAAGACTTTTCTGTTTGCCTTGAAATTTAAAAA
ACTTCTTAACCTAAGGTTGAACTACCACTGGTGTAAAAATGAACGTTGTA
GCATAAGTAGAAAAAAAGCTCAGTTTTTGTAATCGCAAATTTAACCGCTA
AAAATCGCGAATTTTCCAACCAAAAATAAATTCAAATATAGCCCTTTGAT
TCTCTAAAACAAGCAAAAAAATTTCCATAATTATATTTGACTATCAAAAG
TTACAGGCATTCATGTTTCCACTGCCAATTATATCTGGATATACTTTACA
TTTGAATTGTCCTCTCACGCTTATCGTTCGCTAATAAATGATATCAAAAT
ACAACTCCTTCTCACAGACCCACTGGGAACCCTTCCCACTAGAAAAATCG
GCCAAAATATCGTCCCCAGTGGAAAATTATACTCCGATTTTTGTCCCCAT
TTAAAATAATCAAATAAACCAATCCTCACTGCAAAATATTATACTATTTT
TCCCATCCTCACTGAATTTTCTGACTTGAAAACAAAAGAATTGAAATCCC
CAGCTATGAAAACTATGGGAATATCAATCCCCATCGTCTTTGAGTTCGTT
AATTGCGGTATCTCCACTGGTTGAAAACATTCTACCGGGTCTGCGAGAAG
GGGGTGTCAAAATTTGTAGATCTGTGCCTGAAAAATTAAAATCTTCTTTA
ATTCACAAGCCCCACTACCAAGGTTTTGTTGATATACAAACTATGAAAAA
ACTTATCAGTCACTATTACCGTATCATACACATATATCATCTCATGAACT
AAAAATTATCAGTGAGTTTTTGTCAACCGATACGTCTCAAAAGACACTGC
TTACAAAAGAGTAAGAAAAATTGTTGATAAAAAATACTCTCGCATCCTGT
ACGCAGCTGGGATTCTTTTATTTCAGGATTCAATAAACTATGTATTCCTG
CATTTAGTATATCTTTTGTGATTACTGATGTTAATAATATGTTTTTGTAT
GTGACCTGATTATCAAATTTGTGTATGACTGTTGATTAAAGGTATGCCAA
ACAACCCACTGCGATTTGATTTCAATAGGAGGAAAACAAGATTTTTGTCA
AGAATGATGTTTTAATCTTTGCTTCCTTTATTTGTGACAGCTTTCTAATT
CTACCATAATACACATCTTGCCCTCCTTCCTGTATTTTCAGTGACAGGGA
TGGCTAGCTTTTAAATTGTTTATATCCCGACCGACCCAGGCTATATCAGT
GATTTTACCGTCCTTGATTTTGCTCGTTTGGTTTTTCCAAATGGTATCTT
ACCCTCTTTGTTATCAAGGGAGTAGATATACAGTATTACGGTGAAATTGA
ATCGTGACTGCTTGATTAGTATTTGAACCTTGTATTTTCCGTTTATTTCC
ATTATCATCGTGTTTATGTATGTTTGTTTTTCTGCGGCGGAGATGGTAAG
GTTTTAATTTGACTAGATCACTTGACTGACTGAGGATGACGGTAAATCAG
CACTTTTACCGTCCTTGATTTTGCGGGTCAAAATTGCGAGTTTTTTCTAA
TTGCTTCAGTTACTTTACCGTCCTGAAAAGTGCAAGTACATGAACTCGCT
ATTTTTAGTCTATACGGCTTATAATACTTATACTACTCTATAAGTAGTTC
TATGAACATTGAAAACGAATTTCACCTAAATTGTAATCAGCTTGTGGCAG
CAAGTCAGTGATGTCGACATTCACCAAATTAATATTCAAAATTCTCATAT
TTTCCATTGCAGCCAGCCCAGTTGGTACTATCACCATTGGTAACATCAGT
TGTTTACATGACAATCTCCATGGTGATATAAAGCATACAATAAATCCAAA
GATGGCGTCCTCAAGTGTGGTGTATTTTAAAATTAAAATTGTCAGAGGGA
ACCAGACTTTCAAGGTATGTTAATTGGATCTAATGCAAATACAGATTTGC
TAAAAAACAAAATTTCTTCAGAATTACAGGTGGACTTGCTAGGGGAGTCG
CTCTCCTGAAATTCAGAGCTTGGTCTAATTTAGTTCGAATTATAGAGAGA
TTTCGAATAATGAAGGTTCGAGCTGAAGCGAGTTAACTGTACCGAAAATT
AAATGATTCGAAACAAGATTCCCGGTTCGAAACTACTCTCCTTTTAATGT
CCGGCTCGGTTCATAAATAGCCGAACCACCTGGCCGTTGACCCCGTGAAA
ATAATCAACAGAGCTCTGTTCTAAAACACGTAAAATATCGATCCTTAACA
TATCCTTCCTATTTAGGAGGTTGAACTAGCCGGTGATCATGTTGTTTTAC
GAAAGCAATGTCCAAAGGCTGGTGAATGCTTGACGTTGTCAGCCAATATC
GAAGTTATCAAGAACATCACGCAAAAATACGAATCAAAGTCTTCGAACGT
TGTCAAATTCTGTGAAGGTATGCGGGTACTTTGTTTTTACATCAACGGGT
GCTCTGGTTAATCGGATAGGAAAATCAAGAACCAAAAACCTTCTAATTTC
AACCTGAAAGAGATTCGCGTTTCATATAGTAGTAGCAGTTTCCTGGTTGT
GCAACCCTCTAGGAATATCAACCTTTGTTCGAGACTGACAATCCCAGATT
GCACAAAGCATTGTTTGAAAAATTTCAATGCAATGTCAGTGATAAAATGA
AAATGATGTTAGATAGAAGTTGAAACATCGTTGTGAGCCTGTTGGCAGGG
GAGGGGAGGTTATTAAAAGATGTTTCAGAGAAAAATTGACAACTTTTTAA
CCAAATCTTTCTTCATTTTTAGAACATGCACATTCCTCAAAAGGTAAGTT
TATTCCTTACACTTATTGAAATTTCAATATTCTACATGTTTGAAGCAGTT
TTGATTTTAAGCTTTCACTCTATAATAGTCAGAAAGATGAATTGACACGA
AAATTGAATCTTAGGACTCTCTAAAAGTCCTCATCAATTTTTTAACTCAA
ATTCGAGCTGGGCGTGGTCCGACATCTGGGTGAAGAGGTGTCTTTTTGTT
ATGTTGGGCGTGGTGTTTCTTTTTTACGTAAATCAATTTGTACCTTGTTT
CCGTAGAAACACCGATGCACATCAAGACAAGCCAAACAATGGGCAAAGAG
ATCGTCATTAACGTTCATTCGAATAGTAGCATGGCGCATGCGCATGGACA
ACATTATTCAAGATTTTATGTTGCTAAGATACAATACACTAATAAAACAC
AGGTAGGTTACATAATTAAAACTTTTGCTGCTGATATCCCATAACTCAGT
CCAAACATGTCCTGCATGCTCTTAGTTTTGTCCATAGCTAATATTCCTAA
TGATGGTTTCAATATGCTTTTCCAAAGCTCAAACTTAATTCTTTTTATCT
ACGTAATTAAATTGATTCGTAAAAAATATACACGTGGGATATATACAATG
TCCTTTTGTTAGAACGGCTGAACTGGAAACAGAGTCTCTCAATCAAAGCA
CAACCAAATTTTTGTTCAAGCACTACTTGAGTGAAGATGATGATCACGGC
TTATTACAGTTTTTCAAATATGGACCAGGCTTAGACCAATCAGATTTCTT
AAAAAGGTGTTATCCGACTTAAACTATTGATTAATTTTAAAATCTAAAGC
CGATTGGTAGTGTGAAGGATTCCGATCAGAGACTTGCACTGAATGCATTC
AGGGTAAAGTGATAGGGAAATACAGTGATAGATACCTTCATTGAGGATTT
AAAACTATTGTATTATTTTTCATTTTCTCAATTACAGACCATTCTGAGAT
TCAATGGTATTTTCAAAACCAAGAAACTGAAGATGGACGAATGCGTTCAA
GTGATGTTTCGTGTTGGCTTTTTATTATCTTATGAAAAAACATCATCCAG
AGTGAAATATTCCAAATGGAATACACAAAAGACTTACTGTGTCACTGTAG
ATGAAGGTAAGATAATACTTTTTTGTAGCTTGCAAAATCTTTCTTCAACC
TGGAAGACCCAGCTGGCACACAACGTTGTTACAACGTCGTGTGCCAGTTG
GGGGAATCTCTTCATAACTCACGCATTCAATCGGAAGAAATCGCCTTTTT
TTATTTCGGGGAAATACGCCTTAGATCAGTAACTTTTTCGTCACTTTCCT
TTTTTACCCAACAAATTGGAAATCTTCAAAACCAACGATGGGAAAATAAT
CAAAGGTTTTCGCCCTTCGCTTTTTTGCGTAGTTTATTTTATATCTATGC
TTGACTCTCGCTTATTCGAGCTTCCATTATTTTGAATCTTTTGATAACCA
GTCCCCGTCAACGAGGAAACCCTCTTGTAATACTTTCTATTATTTGAATC
TCTTTGTAATTCAACCAAATACGTTTCCCGGTCGAGTTTGGTTTAGCGAG
TGTCAAGTAAGCTCAATCTTTCAGCAACTTTAACCTTAGACGGTCTTATC
TTATCATCTACACAAGATCACTAAAAAGGGAATAGTTTAGGAAGCTGAAT
ACATCTAAAAACAGTGGTAAGCCCGGGGCGGAGCAAGCATTGGCGGAGGT
GTTTACAGTGTTTGTTCCAAACTCTACCGACTCTTTTTTGTTTTTGTTAT
TTTTTTCTTCAATTTAGATACGAATTTACAATATGAAGCGGAGAGAGAAA
TTTTACACATTGTGCTAAGTTGTACCATACCAGCTTTAACCATCGTTGCG
CTCATTGTGTGGGCCTTCATTTCTTATTACAGGTAAGAAAATAAAATGCA
TGTGGCCTGGGTAATATTTTCAAGCCAATGGTTTGAAAATTTCGACTACC
ATGAGAACCGTAAGCTTCCAAAATATTTAACCTATGACGGCGGAGAGTGT
AGAAATATTTTGTCTTGGTCATCCCACTATGCAAAGAAATAATAATCTTT
TAAATGTGGAATCTTTGATATGGTTTCTTTCAATTTAAAAAGAAATTGGG
AAAATAGAAAGAAGAACACTTTATTTCAAAAAAAAAATACCTATTTATTC
AAAATTTGACATGAATTCTTTCTTCCTTCAGGAAAAGAGGTGTGGACGAA
GATTTACAGATTTCGATTCAATCTTTCGAAGAAGGACTGGTAAGTAATGT
TGGAAAGTTTCTGCTGGTCGAAGTTCGCCTTGTTGGAGATCGCCACNTCT
ACTTTCGAATTACAACCCAATGTTGGAAAGTTTCTGCTGGTCAAAATTTG
CCTTGTTGGAGATACCCACTAAAACATTCATTTTAATTAACTAAAAGTTT
TAATTCGTCTCTTACATTTAATTTCCGGGTCGAGACTTGGGTGTTAGATT
TTGAGCCATTATACTGTACAACCAATTTTCACAACTCGCAGATTAGTTTC
TGGTCCGTTTGAGAAAGTTGCTAGGCTAGTTTGCATATCACTCGAAATTT
TCATAACTTGAACTTAACCTCATTCAAAATGGCGTATTAGAGACTTAAGT
AGAAGCTTTATTTAAGATTTCCTATATTTATTCAAGATATCTGTGGTTTA
CCTTTCTCAGACAGAAAAATGTACATCAAGATATACCAAAAAATAAATCT
ATATACTCCATCAATTTTCAGCTCGATTCAAACAGAAGTAGTCACTGTTC
GCCAAACCGAGGAAACACAAACACTCTTCTTCTCACTGAGCAAGCACCAA
AAAAGAGTGGAAATGATGATAAACTTTACTCCTCAAACGAAGAAGAACTG
GGAAGGATTCTATCTTGCTCCGGGACCGACGCTGATCTAAGAGAAAGCAA
AAAAGTTGACTTTGGAGTATAGTGGCATTTTTTGTATTGCTCTGGGACCG
ACGCTGATCTAAGAGAAAGCAAGAATGTCGACTTTTGAGTATAGTGGCAT
ATTTTCGTATTGCTCTGGGACCGACGCTAATCCAAGAGAAAGCAAAAAAG
TGGACTTTTGAGTATAGTGACATTTTTTGTATTGCTCTGGGACCGACGCT
AATCTAAGTAAAGAGAAAGCAAGAAAATTGAGTTTTGAGCCAGGGACCTT
ACAGTAAAACCAGTTCATTACTGAAAAAATCAAATGAGAAGATATTATAT
TTCTCAAATAAGGAAGAACTTGTGGAAGGATTTCATGCGCTGCTAGGATG
TGACCGTCACAAATATGCCATAACACAGTTTCATTTTGAGTCTTAAGCAA
AACAGTTTTTAGAAATTCACCCCGAGAAATAACATTATTTCTTCGAACAA
AATGGATAAGAGAGACAAAAATTTGGACTTTAAGACTCTTACTAACCATG
TTGAAAGTGAACAATTGGTACACAATCGTTTTAAAAGCCTTAAAACCACG
TCACAAATATATGCATGAAAGAAGGCGACGTCACCACAAATATATAAAGG
AAAACTAAATCGGTAGATTCAATGTTTCACCATAAGGAAATTTTAAGACA
CTTTTCACCCACAGATATCTAAGCCCGAAGGGCTAGATTTGCAACTTTAA
GCTTTCTCCAGCAAAAAAAAGTGAAGCAAAAATTTGACTTTTTAAATTTC
GTGCCGAT

Coding sequence (CDS) from alignment at sc0000074:121297..132704-

>TCONS_00007180 ID=TCONS_00007180|Name=TCONS_00007180|organism=Clytia hemisphaerica|type=CDS|length=1092bp|location=Sequence derived from alignment at sc0000074:121297..132704- (Clytia hemisphaerica)
ATGATGTTATCGACTTGTAGAAGGCTGAATGTTCTTTTCCAAACCATTTT
GATTGGGCATATAATATTCCAATGCAGTGTCAAAGCCAGCCCAGTTGGTA
CTATCACCATTGGTAACATCAGTTGTTTACATGACAATCTCCATGGTGAT
ATAAAGCATACAATAAATCCAAAGATGGCGTCCTCAAGTGTGGTGTATTT
TAAAATTAAAATTGTCAGAGGGAACCAGACTTTCAAGGAGGTTGAACTAG
CCGGTGATCATGTTGTTTTACGAAAGCAATGTCCAAAGGCTGGTGAATGC
TTGACGTTGTCAGCCAATATCGAAGTTATCAAGAACATCACGCAAAAATA
CGAATCAAAGTCTTCGAACGTTGTCAAATTCTGTGAAGAACATGCACATT
CCTCAAAAGAAACACCGATGCACATCAAGACAAGCCAAACAATGGGCAAA
GAGATCGTCATTAACGTTCATTCGAATAGTAGCATGGCGCATGCGCATGG
ACAACATTATTCAAGATTTTATGTTGCTAAGATACAATACACTAATAAAA
CACAGACCATTCTGAGATTCAATGGTATTTTCAAAACCAAGAAACTGAAG
ATGGACGAATGCGTTCAAGTGATGTTTCGTGTTGGCTTTTTATTATCTTA
TGAAAAAACATCATCCAGAGTGAAATATTCCAAATGGAATACACAAAAGA
CTTACTGTGTCACTGTAGATGAAGATACGAATTTACAATATGAAGCGGAG
AGAGAAATTTTACACATTGTGCTAAGTTGTACCATACCAGCTTTAACCAT
CGTTGCGCTCATTGTGTGGGCCTTCATTTCTTATTACAGGAAAAGAGGTG
TGGACGAAGATTTACAGATTTCGATTCAATCTTTCGAAGAAGGACTGCTC
GATTCAAACAGAAGTAGTCACTGTTCGCCAAACCGAGGAAACACAAACAC
TCTTCTTCTCACTGAGCAAGCACCAAAAAAGAGTGGAAATGATGATAAAC
TTTACTCCTCAAACGAAGAAGAACTGGGAAGGATTCTATCTTGCTCCGGG
ACCGACGCTGATCTAAGAGAAAGCAAAAAAGTCGACTTTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004026XLOC_004026Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007180-proteinTCONS_00007180-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007180-exon-sc0000074-1575043694:132507..132704TCONS_00007180-exon-sc0000074-1575043694:132507..132704Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1575043694:125841..125992TCONS_00007180-exon-sc0000074-1575043694:125841..125992Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1575043694:125338..125488TCONS_00007180-exon-sc0000074-1575043694:125338..125488Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1575043694:124962..124982TCONS_00007180-exon-sc0000074-1575043694:124962..124982Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1575043694:124553..124698TCONS_00007180-exon-sc0000074-1575043694:124553..124698Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1575043694:123849..124017TCONS_00007180-exon-sc0000074-1575043694:123849..124017Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1575043694:123073..123187TCONS_00007180-exon-sc0000074-1575043694:123073..123187Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1575043694:122716..122773TCONS_00007180-exon-sc0000074-1575043694:122716..122773Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1575043694:122051..122233TCONS_00007180-exon-sc0000074-1575043694:122051..122233Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1575043694:121957..121978TCONS_00007180-exon-sc0000074-1575043694:121957..121978Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1575043694:121297..121883TCONS_00007180-exon-sc0000074-1575043694:121297..121883Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1510915933:132507..132704TCONS_00007180-exon-sc0000074-1510915933:132507..132704Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1510915933:125841..125992TCONS_00007180-exon-sc0000074-1510915933:125841..125992Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1510915933:125338..125488TCONS_00007180-exon-sc0000074-1510915933:125338..125488Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1510915933:124962..124982TCONS_00007180-exon-sc0000074-1510915933:124962..124982Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1510915933:124553..124698TCONS_00007180-exon-sc0000074-1510915933:124553..124698Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1510915933:123849..124017TCONS_00007180-exon-sc0000074-1510915933:123849..124017Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1510915933:123073..123187TCONS_00007180-exon-sc0000074-1510915933:123073..123187Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1510915933:122716..122773TCONS_00007180-exon-sc0000074-1510915933:122716..122773Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1510915933:122051..122233TCONS_00007180-exon-sc0000074-1510915933:122051..122233Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1510915933:121957..121978TCONS_00007180-exon-sc0000074-1510915933:121957..121978Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1510915933:121297..121883TCONS_00007180-exon-sc0000074-1510915933:121297..121883Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1491911889:132507..132704TCONS_00007180-exon-sc0000074-1491911889:132507..132704Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1491911889:125841..125992TCONS_00007180-exon-sc0000074-1491911889:125841..125992Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1491911889:125338..125488TCONS_00007180-exon-sc0000074-1491911889:125338..125488Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1491911889:124962..124982TCONS_00007180-exon-sc0000074-1491911889:124962..124982Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1491911889:124553..124698TCONS_00007180-exon-sc0000074-1491911889:124553..124698Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1491911889:123849..124017TCONS_00007180-exon-sc0000074-1491911889:123849..124017Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1491911889:123073..123187TCONS_00007180-exon-sc0000074-1491911889:123073..123187Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1491911889:122716..122773TCONS_00007180-exon-sc0000074-1491911889:122716..122773Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1491911889:122051..122233TCONS_00007180-exon-sc0000074-1491911889:122051..122233Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1491911889:121957..121978TCONS_00007180-exon-sc0000074-1491911889:121957..121978Clytia hemisphaericaexon
TCONS_00007180-exon-sc0000074-1491911889:121297..121883TCONS_00007180-exon-sc0000074-1491911889:121297..121883Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000074supercontigsc0000074:121297..132704 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0222478	0	0.025693	1.18488	0.698729	1.07767	1.48458	1.50115	1.5602	1.73375	1.77631	16.1441	13.8251	2.46535	2.93374	1.20694	1.76638	23.1784	18.4225	3.01707	2.10832	1.04239	1.86661	5.08259	3.19842	0	0.0354314	0	0.0263265
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007180 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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