TCONS_00007188 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007188
Unique NameTCONS_00007188
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1805

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007188 ID=TCONS_00007188|Name=TCONS_00007188|organism=Clytia hemisphaerica|type=transcript|length=1805bp
GAAAATTATTACAACAAAAATTAATCACAATGTCAGCAGATCGACTTCGG
CCGGACAGTACGTCCCCCATACCAATCATCAAATGTGGACAGGTGGAATT
CCGTCGGACAAGTTGTGTGACGTTCTCATCCAAACCATTCGATCGTGAGA
GGTTGCAGCAACAAGATCGAAGAGTCTCATTACCAATGAACACGTTGAGG
ATACCTTCAAACGAGAACTTCTTTACCAGGAGATCAACATGTCCAGCTGA
ACAATTACGAGAGCAACAAAAACTATTTCTTGAGCAACGCATCAATAGAA
CGGCAAGTGATTCAGGACCATCAAGAAGAGGTGATAGTGAAGATGAAAGA
AGCAATGGTCGATTTCAACAAGCATACAACGTCATCGAAGCTGCTAGAGA
GTTCTTCAAAGTGAAGCCATGGAATTCTGAAGAATCATTAGCCGCTTCAA
CTTTATCACAAGATGGACGAAACAAACAGAGCAGCTTGAACAGTAGCACG
GCTTCTTTGAAAGCTAGTCCGTTGATGACCCGCAAAGATAATTTCGACTT
TATCATCCCAAAATCACCGACAACGTCACGTGTCGGAAGTTACAACAACA
TCGACGCACCACACGTCGGATCGATCGACGTCAAACATTATCTATCAACG
GAAGAAGTCCAAGAGTTAGAGGAAGTTGGTACACAACTCCGTCTTGGTGA
AGTCAAATTTTCAATGATGTATAAAGACACAGACGAGAAGCTCAAATTCA
TATTGAAATCTGTTTCAGTTTTTCTCAAACCCAGTCCTTCAGTTGTAGGT
TGTAATTGGGTTTGTGAGACAAACACAGTGCTCGAGgttttaaattCCAA
AAAGAAGCCAATCGAAGTCAGTAACGGTCAAGAACTTCTTGTTGATTTCA
AAAAGACTGACGTCACTGACCATACATTACGTCTCACCGTTTACGACAAT
CGACGTAAGCACGTAAAGAACCCCGTCGGTCACGTGATTTTTCCGTTACG
TGATGCAAGAAACCTGGGTAAAATGAACAGTTATTCGAAGAAACTAACCT
TTTATTCTCAGCCTGCAGGATTTAACAGAGGAAACGTAAACATCGCACTG
TCGTGGGGTATATCAGCTCAAAGGCTGGATGTGAAAATTGGTGACGTAAC
AAACTTAAGATGTCCAGCTTATGGTGTCAACGGAAAAGAATTCTTCATCA
AGACGATCGTATTCATATTGGATAACAAATACAAGTCATACAAAACACCT
CTACAACGCGCCACACCTGAACTAACATTCAAGGAAAAATTCACTATCCC
TCTCACATCTCCACAACTCAAAGACTCCACAATTACATTCCAATTATATT
TAAAACATTATAATAAAAAGAAGATTGGACATAAAGTGTTGGTTGGCAAA
ACAGTGATTGGACCTTACATGAGACATGGGGATCGTTCACTTTCCCAATG
GGAAAAAATGATTACTAATCCATTGGAAGAGGTATCTGAAcaacacattt
tatttttatgatgatttCTGTAAACGCTGTTAATTGGTAGACACTACTTC
GTCTTACATATAGCtgccataaaaaagtttctccaCAATATTACTGAGGC
AGAGGTGTGAGTAACCTCAGAATCAAGGAGGAGCTATAGATTTCCTAAAT
GAGTTCGTTAATATGATAAAACAACAAAAGATTAACAAAGAGGTCGCCAT
TATCACCATTAATTCTATATTATATGTTTAATTATTTTCTAGATGttatt
gtaaataattttttcaaatgattcaacttttaagtttcaaatttttgttg
aCAAG
Run BLAST on NCBI

protein sequence of TCONS_00007188-protein

>TCONS_00007188-protein ID=TCONS_00007188-protein|Name=TCONS_00007188-protein|organism=Clytia hemisphaerica|type=polypeptide|length=502bp
KLLQQKLITMSADRLRPDSTSPIPIIKCGQVEFRRTSCVTFSSKPFDRER
LQQQDRRVSLPMNTLRIPSNENFFTRRSTCPAEQLREQQKLFLEQRINRT
ASDSGPSRRGDSEDERSNGRFQQAYNVIEAAREFFKVKPWNSEESLAAST
LSQDGRNKQSSLNSSTASLKASPLMTRKDNFDFIIPKSPTTSRVGSYNNI
DAPHVGSIDVKHYLSTEEVQELEEVGTQLRLGEVKFSMMYKDTDEKLKFI
LKSVSVFLKPSPSVVGCNWVCETNTVLEVLNSKKKPIEVSNGQELLVDFK
KTDVTDHTLRLTVYDNRRKHVKNPVGHVIFPLRDARNLGKMNSYSKKLTF
YSQPAGFNRGNVNIALSWGISAQRLDVKIGDVTNLRCPAYGVNGKEFFIK
TIVFILDNKYKSYKTPLQRATPELTFKEKFTIPLTSPQLKDSTITFQLYL
KHYNKKKIGHKVLVGKTVIGPYMRHGDRSLSQWEKMITNPLEEVSEQHIL
FL
Run BLAST on NCBI

transcript from alignment at sc0000074:168364..181679-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007188 ID=TCONS_00007188|Name=TCONS_00007188|organism=Clytia hemisphaerica|type=transcript|length=13316bp|location=Sequence derived from alignment at sc0000074:168364..181679- (Clytia hemisphaerica)
GAAAATTATTACAACAAAAATTAATCACAATGTCAGCAGATCGACTTCGG
CCGGACAGTACGTCCCCCATACCAATCATCAAATGTGGACAGGTGGAATT
CCGTCGGACAAGTTGTGTGACGTTCTCATCCAAACCATTCGATCGTGAGA
GGTTGCAGCAACAAGATCGAAGAGTCTCATTACCAATGAACACGTTGAGG
TTTATGTTATTTTCGTTCCCCTACTAGGTACCCCCAGACAACTTTATTCT
TCAATACTCTTTGAAGTTTATTGCCAAGAACTGATTTCACTGATTTCACA
ATACTCAAGAAGTTGATTGTTCGAAAGCCTTTCGGTGTATTGTCGTTTTC
AAAGGTGAAGATACATAATTTTATTATTTTATTGATTATTTTGATGTTTT
GGTTTTTACTTTAAAACACTTCGGGAACGTCCAGAAACTTCCATAGGCGT
TGCGAGATACCCTGCAAAATGTATGAGAGCGGTTTTTACGACACTAATTA
TTGTGTTTGTTTTATCAAAAGATAATGAATATGTCATAAACGTCTGCACT
CCCTCATAAATTTTGCAGGGTAGCTCGCTACGCCTATGACTCCAATTCAA
CATCATCTTGACGTTCATAACGTTAACTAACTCTACTTCTTTCCAGGATA
CCTTCAAACGAGAACTTCTTTACCAGGAGATCAACATGTCCAGCTGAACA
ATTACGAGAGCAACAAAAACTATTTCTTGAGCAACGCATCAATAGAACGG
CAAGTGATTCAGGACCATCAAGAAGAGGTGATAGTGAAGATGAAAGAAGC
AATGGTCGATTTCAACAAGCATACAACGTCATCGAAGCTGCTAGAGAGGT
AAGTGCTGATATTATGTAGACTAGGGTCTCTTGGCTACTCTTGATAAATG
CGTTCCATAACGTCATTGACACAATCCGATAGTAAAGATGATAGAGGCAA
TAGTCAAATAGTCAGATTTCAACAAGTGCATAGCGCCAGTAAAGCTGCTT
GAGCTTTTAGTATTTTGAATTCAGAATAACGCCATCAAGGCTTCAAGATA
AAGAACTTTCTGTCTTGATTTCTTAGAAGTAAAAGCACCGAATCTTAGCA
GAAAGCGTAAAAATCTTTACCTAACTTTATTGATGCTGCTTGAGAATAAC
TCAAAAACACCAAGTGTTTGTTATTGGTTAGTTTTATTGTTTTTTTTTAA
TCCAAATTGACGGAGAGAACGCGACATATTTAGTATGTTAGTGTATAATG
CTAAGCCCGCTTACATGCTTAATTGATGTAGCCTATTGGTCTTAGTTCCA
CTCGATAAAGGCCTTCCATACCGTCATTTAGTTTACTCAAGAAATTAGAG
CACTAGAATATGTACATATGGACAGGCCTGAAAACATTTTAGCATGAAAT
TGCAAGATCAATCAATTCTGTATTCGGAATCTTAGCTTATCTTTCCCGGG
TCAACCCATGTCATGTAAGGGGTATTAACAATAGTAAGATTTGCCTGATG
CAGTATCCAGAGTAGTGATGTTACACTCGTATGTATAAACACTTGTGGAA
AAAAGTCGTTCTCCCCGTTTGTTGCCGTCCGCATATCGACAGGACCATTC
TTTCCTTCTTTTTAACCACGACACAAGTGGATGGGTACTGAGGGACCAAT
TTTTGACAATGTCTCCGGAACAAAGAATTTTCCGGAGTTCTCGTACACGC
TTTCTTTTATAAGAATGTGTTTTTCAATGCATAAATATCCTTAACTTTTT
GGGGAAAATCATCCGGAGATATTCTTACGGTATTCTTATGATTGGATCCA
ATCCTAGCCAAAATCTACCATGTAGTACATACTCAAGTAAATATTTGGCA
TTTTTGTTGAACGTTTCAGCATTGCTGGGTAATATTTGGCAATTTAATGG
TAAAATGCTCTAAAATGAAATTCTTAGGTTCAGCTTCCAAATTTCATGAT
GCTGGTAATCTTAATTTTTTGGCCGATTTTATCAGAAATGTTCTTATAGT
ATATTCTTATAAAAAAAGCGTGTAACTACCGTTGGAAAGAACACAAAATG
TCAATGAAAATAGAATGGTTTGCTAGTTTTTTTGTTCAATAAGTGAAAGG
TGCTTGGACTGAAAATCTTCAGTTTTTCCCCCAAAAAAGAACTCATAAAA
AAGATATGGTTTACTTTTCAGACAAGTGGTATCATAGTAACTGAGACAGA
AAGAAAGTAAATTTGAAGTGAAAATATTTTTCATCAATCAACTGTTAAAA
ATTGAAAAGTAATTTTTCATACAAATAGTATAAACCTCTAGTTTTGGATT
TTTTTCACTGCCGGGCCACACTGGGGAGAAGTGCATTCTTCTTGCCGTTG
AAAACCAGGTCTTTTGTTTATTGCACTCCTTCTCAGAGCACGTTGGAAGA
ATGGAAGAACATTTAGAATTTCTATTTCTTTTGCATCAGGAGTAGGTTTT
CTGCAAAGATTGAAGGGATGACATAAAAAAGTAGATTTTTATATTTATAC
GTACTTTAAAAAGGGACTCGGTTAGCGCTTAAGACAACTTATTCCTTCAA
TGACCTTAATTCGAGAAAATTGTAATTTAGGAAATTGCCATTCCAAAAAT
GATGCCAATTTTTTAACAAAGTGTATCTTTGTTAACTGACACCCCTGCCT
CACTCTCCCTTTATGGTTTATGGTTATTATAGAGATCGATTTCTGAAGCG
AGGATGGTGAACAAGTATTTTATTTCGCAGTGTATTTTTTTCAAATGGAA
GGATTTTTCTCACAATAAATGTTTTTTGTATTCTTATTCTTTATCTCAAC
GGGGTGGTCCTGAAGGGTGTGTGACTTGATTATCAACGTCATCCCAATAA
TTACACAATGTCTCTATAACGTCCAATTAAACGTATGTAGTCTGAAAGAT
CGGGTACATCAGATTGACGTTATTTTGACATTTTGTCAAATCAAAGCTAA
TACTAGCCAGTGCCTTCCCACAAACCAAATTTTTTCTTTGTTTTATGTTT
TATGTTTTTTGTTTTAAACCGCGATAAAAAAGCGGTTTTCGTCTAACAGG
CTAAGCTAATACCTAATCGGTAGAAAATTCGTCAGCGAAAATCTTGTCAC
AAAGAGATTTTTTCGTCACATTCTGCAGACGAGTTTTCAACTCTTTTCTA
TTTTTTTGCCAAAAGCCATTGGTAGAAATCAAATCATCTGAACGTCACTG
ATTATCGAAGTTTCCATTGGCTTAATTATAGCTTCCAGAAAAGTAAAATT
GATTTACAAATATTTGTTGGTGAGAAAACAACAGTTGTACAGATATTTCA
AACGTGTCATTATTTTTGTTGAGAAAGACTTTTTGTTTTCAATAATGTAG
AAGTTCACTGGAGAATTGAAGATTAAAAATTTTTTTCACGGTTTTTTTTG
GATGTTGCTACCAACTTCACATGGTTTGAAGAAATGTTAAGCAAGAAGAC
GAGACTAGATACGGTAAGAAAAATGCTGTGCTTATCCTTCAGATACCGAT
ACCTGGTGACGAATCTCGTTTGCTGAACCTGATCTTTTAGACCTTTATGA
GGGCAACATCTTGAGAAATAGGTTCGATCGCAAGCGCAGACCTGGCGCAG
TTTCTGTGCTCACAGCTTGATTAGTGTAGATGTCTCGAAAAAACATCTAT
TTTACGACCAAAAGTAAGCAAAAAAAATCAGAAGCAGATCTTCTGTCTAT
AAAGGCCCAGCTTTTGGCAACCAACATTAGGAACAGCACATGACTGTACA
AATATTCCAAGGAAGAAACATAGTTGCTTATACTTCTATCTAGTTTTTTG
GTGATTTTTTTTTATCTAATATAAGCCTTGAATACAGCTTCCAAGGTTAT
TGCGATTTCTTAGAATTCTTCATCTTCATTGGATCGCAATGGCAAGACTT
ACTCGATTTATGGATTTTAACACCATCTGCATCTCACAAAATTCAAATTC
CTTTCATTGATGATCAAAAGCATTTTCAAGGACATGATTGCGAGGAAATC
CAAAGAAAATTGAAAAATATGGGCTCTAAAAAATAGAGATTATAGAACTT
TTTTTTATCTTTCCAAGGCCCGCATAAATGAGTGAATACAGCATGTCTTT
AGAGGGTTATTATGTGTTGTATGAAATTAATATCAGGTTGGTTTAAATTA
ATTTATCCAGTGACTTTCACAGTACTATAAGGAAAATTTTGATTTTTGTT
GGATTTCAATCTCCTCCGAGCAAGAAGTTTATTCTAATGAAAAACCAACC
ACGAAAAATTAAAAGTTTAAGCTCTTTTTTTATTTGTCTACTGAAATTTG
ATTTGAAGGGCAAATATTATAATATAAAAAATTGAAGGTGAGAGAGGCAA
AAGTTTTTTTTAATTTCTCGAGAAAAAGAAACACTATGAAAGTGTTACAA
AAAAGTAAATGTATACCTCGACCTTGCTTTTTAGTTGCTGAGCATTATTC
AAGCCCTCTGTAAAGTAAACTTAGAAAGTCTTAACACCAAAAAAATTAAA
AAACATTGAAGTTAAGATTTTGTAATCACGAAGCAAAAGGTTTGAAATTG
TTGACGCGAAAAGTTGAAAATTATTGACGCGAAAAGGTAAAAAATATTGA
TCCAAATAGTTTAAAAATATAGAAACAAAAAAATAGAAATCTTTCACACG
ATAGAGTGAAACTTTGGTTCATTTCTTCATTTATTTCTTCAGCGTGAAGG
CGCGTCATAGGACTAAACCCATAATCTTGCCCTTCCTTGAAGAATGCTTT
ATATTTATACGACTTGATTAGTGTCCTGCCCTCTAGGGTTTCTTATGAAA
AATACTACTTGAAGCTCTAACGAGACTCAATTTTCAAGTTTCACGTAGAG
TTCATAAAATCGTTATTTTAGCTGCTGTGTCAAAAAAAAATTTGCTTTTT
ATAAGAATAGTTGATAGAACAGTCACTAATAACTTTTCTATGTATTTTAA
AGTTTTCATGATTTTTGGATTTAAATTGCGGTGGCAAATTTGAAATTTTT
CAAAAGATTTTTCGGTCAAATTTCGTAATTTCATCATGTGTCACTCTTTG
ACGTCACTGTACCAATATAATTGTAACATTTAGATGCTGTCAACGGTCTG
ACGTCATAATTTAAGAAAGATGAAGAAATTATTTCTTAATCTCAAGAAAA
AAAGATTTTTCGCGAAAATGTTGAAATATTATGAAACAAGTACTATAACT
GACACCTTCAAACAAACTTGAAAGAAACAAAAAGAAGATGAAAAGAAAGA
GAAAAATAAAGAACAAAAAATTAAATTAAAAACTCACCACATTCTTTTCA
CTTCAATACTTCTTCACTTGTAAACTGTGAATATTAAAATAAAGAAGAAA
ATGAAGTTAAAATGAAGAGATTTAATCTGATTCAATTTCTTTACCTGGAA
TATTTCACATCAGAAATCCACCTTCAGTTACTGGGGTTGATTACTATTGG
GGAAAGACCGGTGATTAATATCAGCCTATTTCATAGGATTCGTGCATCTG
TTACATGCTACTTTCTATTCAGTGTAAAGGCATAGTATAAGAAAGCCGCG
ACTGGAATATGTACTGCATTATCTTTTCAGTTAATTGCTGTTCCATCTCT
GTCTCCGAGCTTTATAAGAACATCAAGATGCTCATTTTATTATTGGTAGA
TAGTTTTTGAAATTTTGCTCTNNNNNNNNNNACATCAAGATGCTCATTTT
ATTATTGGTAGATAGTTTTTGAAATTTTTCTCTTATTTTCCTTCACAAAA
AGTTTTTTTGTTGCTAGATATCTTTGAATATGCACCCAATAGAACACTTG
AACTAATTTTGGAATATTTTAGGGGTATTTTGTGGAAACAATGGTTTTTC
GCCAAAATTGAGATTATAAGAACTATATTCAAGATGACAACTTTCCTGTC
AGTTTGAATGATAAATTTTGAAGGTGCTGGCTTGAAATTTTCACAGTATT
ACCTTGATGTAATTTTTCATTGATTTCTAAAATAGTTTCACTGAAATATT
GTGAAGGCATTCAAGGCACTTTATTAATTTTTGAGTTCTTTCAGCCCAGC
CATTTTGTGCTTGTTTAAATTTCTTATTGTTGATCTTTCCTTTACAATGA
TTTTATAATGCAAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTTAAAGATGCTACATTACTGATTTCTTGATC
AACAAATAGTCATCAAATACGACAGAGATAGAACAACAGAAATTCAGATG
TTATCATTCAAGCCGCGGCTTTCTTATACTGTGGTAAAGACAAAAATAGC
ACAAATTCGAAAAGACGTTGAAAGAATTAAATTTTCTGTCATCATTCAAT
TGAATTTGGAATTCGAGAAATTGATTTTGTAAAACGCATAATCTAAATTC
GCAAGAGAAAGCTCAACCATAAAAAATCAATTAATGCAATGACGTAGAAA
AATATCATGTACTAAAAATACGAGTCTTATGAAATAGGCTACACAATAAA
AGGGCAGAGTTAATATGCATAGGCGAAGCGAGATACCCTGCAAAATTTAT
GAGGGAGTGCAGACGTTTTTGATATATTCATTATCTTTTGATAAAACAAA
GACAATAATTACAGTGTCGTAAAAACCGCTCTCATCCATAAATTTTGCAG
GGTATCTCGCTACGCCTATGCGAGAGTCCAGTACAACAAATAGATTAATC
TGCTTTCAGTACACAAAGCATGAAGAAATTAAAAGTTGAAAAGAGGAGGA
AATTTTGGGTATTTTACTACCGGGGACTTAATTTTTGATAACCTTTCTCA
GTGAGTAGCAGGTTGAAATTGAAAGGTTAAGTTATCTTTGATAGCTCGCA
AAAGCGATGGAGGTCAGGTTAACATCGGTAAAACTGTCACCATCGAGTAA
GATTAAAGAATTAAGCAAGATTTCAAGACATGAATAATCCAGTTAGAGTG
AAAGCTAGAAACTAGATTTCTTTGAAACAGCCTAGGAACAATTGCTAGGA
AGGATAACTTTACTCTAATCTCTACGGAGTAAGAAATATAGATATAGTCT
TACCTTTCTTGTCCAATATAACAAACCAGCCGGCGAACAACGTTATTCGA
ATATCCATTTAACGCCCATAAGGTCCATATAACGTTATATGAATATCAAA
AACTACGTCGTGTCCAAGCTGGAAAAAGTTGATCATGCGCTATGGTTTGA
ATATGAAGTTCAAATTCTATCATATCAGGTTAAATTGGCTTTGAACCTAT
TAGAAAACATTTATTAAAAAGTTTAACCATCTTGGTGGAGTTTTCAGATG
TCCTTTTTTGGAAAGCTCTACAGTTATCCTTGTCTCTTGCCAATGTGAAA
AACTAAAAAGCAGGGATTTTAATTGAAGATTGATTTCCTCGTAGATGTCA
CTTCACTAATTAAGTAAGCGAAAACTTTAAATTGACACACGATAAAAATC
TGACTTCATCATAATCAGATGTTCGACAGATGATGTTTTCATGCCGGACA
GCGGACGTTGCTGAGAAGGAAAGATCTTTTATTGGTCATTTTTTTTTGGA
AACCACATTGAGTTTTTAAAAAGGAATACAAACTGATTTGTTTGATACTT
AATCATTTAACACTGATAACGCGCGTTCATTATGTCCACAACACGTAGAG
CCGTGCTCTTAAGAAATCATAGTCATTCTTTATCACTGTCACCACGAGAA
ACTGATGAATACTTCCCGGAGGTAACCAAACTAGTTTAATTTTGAAAATT
TATAGAATTCACTGAAACCTCTCGTATTAATTTCTACTTTGGTTTGCCGT
CGTGATCGAGTTTAAAGTCTCGAAGGACCTAGAGAGGAATCTTCGACCTT
TCACAAGAAAAAAATAAAGCTTTAAGATTTGCAGCACCTTTGAGATGACG
GATTAAATCTAGCGCTTTCTTTGTTTTCACGTGGTAAACCTGGCGATTTT
GTTTTCAATCCGTTGTTCATGTGAAAACCTCGGGGGTCAAGTGCTCTAGA
TTGGAAATAAAGGGCTTCATTTCCCATGTATGATTTTCCACTCTAGTTCC
TTTCGGGGTTCTAAACTCAATGCGGAGACACCTGAAAAAGATTTTGAAAG
CCCTTGATAAAAAACAGACAAAGTCGATCGATATCAATTATAAAGAATGG
TAGAACAGAAAACCAGACAGAAAGAATAGATATAGAATTTTGTTAAAAAA
GTGGTTCCTGCAGCTACAAGCTCAAGCTAAAGTATCCATGTAACAACCTC
AAAAATATTTCAGTCAATAAGAAGAAAGGATTATTAAATAACTTCACATT
AAAATGGATGACACATCATTTTATCTTCTCGGTGACCAAGTTAAGAAAAG
TCCAATAAATACCGTCAAAAAGGTTCTTGTAGTTTTCAAATTTGTTTTTA
TGAGAATAAAGAATAAAGCTGGGATGCATAAAACTCGAATCTCCATATCT
TAACTTAATCATATAATCATTACTAGAACGGTTTTTCTGGTTCTTTGAAA
TGTCTTAGTGTGCTTGACTGTACCCCGAGCTTTTACGGATAAACGATTAG
ATTACTGGTTACCACTTTGTGTTTGAGCGTACAGTTGTATTAACGTTTGT
CTTAACTACCCTCTTAGCAGATTTATATGATCTAAATGTTTTTGCATCAA
ATTCACAATATCTTTTGGAAAATGTAGCAAGTAGTATCAAAGACTTGACA
CTTATTGAATCCTTTTTTATTTATTTCCTTTCGTAGTTCTTCAAAGTGAA
GCCATGGAATTCTGAAGAATCATTAGCCGCTTCAACTTTATCACAAGGTA
TTTACAACTTTCATATACCAATCTATAGTAAAAACTCATTTAACGTATGT
AAGTTATTAATGTTACTGGGCACTGAATTCGGACGGCTAAATTTTGATTA
TCTACACTCTGACTGACTGAGAACAACAGTAAATCAGCACTTTTACAGCC
CCCGATTTTGCGGATCAGAAAAAACATAGGTTTTCCAATCGTTTCAGTCA
CTCCGCCCACTGACCTTTATATACCCTGGACAAAGCTTCTCAATCCCAGC
CAAGCAAAATCTTTGATCGGAGTTTTTTGAAAATTGGTACCCTAATGTCG
GCACTACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTAACATTGCAATGGCTTCTCCTTGGGTACCAATTC
TAAAAAAACTCCAATCAAAGATGGCAGATATTGTTTGGTCCAGGGTTATA
TAAAGGTCAGTGACTCCGCCGTCCTAAAAAGCGCAAATACATAAACTCAC
TGACATCTAAATTCTTTGGAGACCTGTATTTTTGGACAAGGATTGTACCA
GCTCAGCTCACTGGAAGCAAATAGTAGAATCCTACCAACTGACTGTCAAA
GGGATAAGGAACATTTTTACTTGAATAACGTGTTCGCTTAGATGAAAATA
CTTTTCTTACTACTTCTAGATGGACGAAACAAACAGAGCAGCTTGAACAG
TAGCACGGCTTCTTTGAAAGCTAGTCCGTTGATGACCCGCAAAGGTACGC
TATTATTTCATTACTTTACTAAGTCCTTAAGATGCTTTAGCTAAGTTGGT
CACTGTAGAAAGATAGGATAGAAGGGCTGAGGATAGTGCGTTGGCTAATG
TGACATTAATACTCGTTTTTTCATAAAAACAGATTCTATAAGAACATATG
GCTACGATGGCCAAAGAAAAATCTAAGAACATTTTAAGGCTTTTCGATCT
CTTAAACATCAATCCCTTAAAAATTGCATAAAATACTCACGAATTATTAA
AAAATAGGACTACTTTAAGAACATTTTTAAGTTTAAAGCATGAAAAGTTA
AGAAGATCCGATTATACTACTATATTACGTTGTTCCATACTTGTTTGGGC
GTTATGGGTTTTTAACTTTATTAGTTCCAATTGTAAAGAAGAAACTGTAA
TCGTTTCAGATAATTTCGACTTTATCATCCCAAAATCACCGACAACGTCA
CGTGTCGGAAGTTACAACAACATCGACGCACCACACGTCGGATCGATCGA
CGTCAAACATTATCTATCAACGGAAGAAGTCCAAGAGTTAGAGGTAACTT
TTTGCTCGAAAAAGGTCGGGTGGGATTGAAATAATTAATCCCACTTTAAT
GGACGTTCTATGGACGTTGATATAACGTTTTGAGAGAATGGCACTTGTAT
TTAGGAAAAGTATTACACTTTTTTCTTTTATAAGAAAAATTTAAGAAGAA
TGCTGATCATGAAAATACTCAATTAAAAATAGGGTACAAAGCCTGAAATA
CCTCAATAAGACCCTATAAATAAAAACAGGATAAGAACAATCTGAAGCTC
AAAGTACTAAAAAAGTAAGAACAGCCGAGTCTCTGTAAGTTTACTGGTTC
TTATAATTAAAGTGTATAGTGAGAGGTATTAGTAGAGAATTTTTTAAATT
CTTTTGTATCTCTTGCCGAACATTATGCAAGATAAATCACAAATACGAGA
CTCTATTATTCGAATCTCTCTGTAATTCGAACAAATAATATTCCCGACCA
AGTTCGAATCAGTGAGAGTCAACTGTACTAGACTTTCAGTTCCATGTCTA
CAAAATATTTCATCTTCCAGGAAGTTGGTACACAACTCCGTCTTGGTGAA
GTCAAATTTTCAATGATGTATAAAGACACAGACGAGAAGCTCAAATTCAT
ATTGAAATCTGTTTCAGTTTTTCTCAAACCCAGTCCTTCAGTTGTAGGTT
GTAATTGGGTTTGTGAGACAAACACAGTGCTCGAGGTATGACATAGTCTT
GTAATTTGACATTTAGATTTTCATCATAAATTGCGGTTGATCCTACTTCT
TTTAATTTCAAAACAATTAAAAAAAAAGGTTATTTACGACGTTTCTGTGT
CATCCTACCACTATCAGCATCAGTTATTTCTTTAAATTTTTTTTTTGAAG
TTTATTTTTCATCCCCAAGAAGAAAGTACACTTGTAGATATCGTATCCAA
AGGTTCTAGTCTTTGTTCCTGAATTCAGTGCCTTGAATTTTTACATATAA
TTCGGTTATAACGTCAGATGAACTGGAAAATCGATTGTTTTAGTGGGAAG
CAGACAAACAATTCTCATCCAATTATTACTGGTCAAAGTCATGAATAAAG
CTAAAGGAATCTATGATAACCATCTTTATTAATTTTAAAGGTTTTAAATT
CCAAAAAGAAGCCAATCGAAGTCAGTAACGGTCAAGAACTTCTTGTTGAT
TTCAAAAAGACTGACGTCACTGACCATACATTACGTCTCACCGTTTACGA
CAATCGACGTAAGCACGTAAAGAACCCCGTCGGTCACGTGATTTTTCCGT
TACGTGATGCAAGAAACCTGGGTAAAATGAACAGTTATTCGAAGAAACTA
ACCTTTTATTCTCAGGTGAGTTGACGTAGTTTCTCAAAACTGAATTAGGT
TTAAAGCAACAGTTTTTNACCTTTTATTCTCAGGTGAGTTGACGTAGTTT
CTCAAAACTGAATTAAGTTTAAAGCAACAGTTTTTTCAGATCCAAATTAG
GATGCTGTTCCCAAAAACTTCTTAGGACGGATTGTAAGATTTGACATCGA
ATTTGCCTTAAAAACTCTATAGTGATGTCAAAACGCTGGTACTACTTATT
ATTACCTTTCCTTTCCTTTTCTGCTCTGTTCATTTATGCTGTGGTGGATG
TATAAATGGACTTTAATTTCAAAAGGTTGCAAAGAATTTCAGAGCAGTCC
GTTTTACCTTCGACATTTGTCGTGATTTAGGGTTACTATATTATTATACA
TCGTATAAAGGGCTAGGTGTAACTTCATTCTTATTCTTCTCCTTCGTCTA
GCCTGCAGGATTTAACAGAGGAAACGTAAACATCGCACTGTCGTGGGGTA
TATCAGCTCAAAGGCTGGATGTGAAAATTGGTGACGTAACAAACTTAAGA
TGTCCAGCTTATGGTGTCAACGGAAAAGGTAGAGACTTATTAAAGATATT
TGTTAAAAGACTTCACTAAAAAGTAATTTTGCGTCAAACTACTATGTACT
TTCAGGAAGAGATACAAACTGTTCGAACATGCTCGGTGGAAATCCTTCCC
ACAGTGGGGATGAAAATTTCTTTTGAAATCACGATGGGGATAGAAATTTC
ATTGTCCCAGGTCAAAAAGGAGTGCAATTTTTTATAGTAAATTTACAAAT
ATGGATGATGGCCCCGATGATACACTATGATAGTCAATTTCTAAGCCAGG
CTTGTAGAGCATATCTCCCACCAGGGACGAAATTTAGGCCAAATTTCTTA
GTTGGGCGGGGAGGGGGGTGTTTCCCACCGGGTCTGTGATACGGGTGTGA
AAATTATTTGATTATCTTAACTAACCATTTTATTCTTTACTTTCTTTAGA
ATTCTTCATCAAGACGATCGTATTCATATTGGATAACAAATACAAGTCAT
ACAAAACACCTCTACAACGCGCCACACCTGAACTAACATTCAAGGAAAAA
TTCACTATCCCTCTCACATCTCCACAACTCAAAGACTCCACAATTACATT
CCAATTATATTTAAAACATTATAATAAAAAGAAGATTGGACATAAAGTGT
TGGTTGGCAAAACAGTGATTGGACCTTACATGAGACATGGGGATCGTTCA
CTTTCCCAATGGGAAAAAATGATTACTAATCCATTGGAAGAGGTATCTGA
ACAACACATTTTATTTTTATGATGATTTCTGTAAACGCTGTTAATTGGTA
GACACTACTTCGTCTTACATATAGCTGCCATAAAAAAGTTTCTCCACAAT
ATTACTGAGGCAGAGGTGTGAGTAACCTCAGAATCAAGGAGGAGCTATAG
ATTTCCTAAATGAGTTCGTTAATATGATAAAACAACAAAAGATTAACAAA
GAGGTCGCCATTATCACCATTAATTCTATATTATATGTTTAATTATTTTC
TAGATGTTATTGTAAATAATTTTTTCAAATGATTCAACTTTTAAGTTTCA
AATTTTTGTTGACAAG

Coding sequence (CDS) from alignment at sc0000074:168364..181679-

>TCONS_00007188 ID=TCONS_00007188|Name=TCONS_00007188|organism=Clytia hemisphaerica|type=CDS|length=1509bp|location=Sequence derived from alignment at sc0000074:168364..181679- (Clytia hemisphaerica)
AAATTATTACAACAAAAATTAATCACAATGTCAGCAGATCGACTTCGGCC
GGACAGTACGTCCCCCATACCAATCATCAAATGTGGACAGGTGGAATTCC
GTCGGACAAGTTGTGTGACGTTCTCATCCAAACCATTCGATCGTGAGAGG
TTGCAGCAACAAGATCGAAGAGTCTCATTACCAATGAACACGTTGAGGAT
ACCTTCAAACGAGAACTTCTTTACCAGGAGATCAACATGTCCAGCTGAAC
AATTACGAGAGCAACAAAAACTATTTCTTGAGCAACGCATCAATAGAACG
GCAAGTGATTCAGGACCATCAAGAAGAGGTGATAGTGAAGATGAAAGAAG
CAATGGTCGATTTCAACAAGCATACAACGTCATCGAAGCTGCTAGAGAGT
TCTTCAAAGTGAAGCCATGGAATTCTGAAGAATCATTAGCCGCTTCAACT
TTATCACAAGATGGACGAAACAAACAGAGCAGCTTGAACAGTAGCACGGC
TTCTTTGAAAGCTAGTCCGTTGATGACCCGCAAAGATAATTTCGACTTTA
TCATCCCAAAATCACCGACAACGTCACGTGTCGGAAGTTACAACAACATC
GACGCACCACACGTCGGATCGATCGACGTCAAACATTATCTATCAACGGA
AGAAGTCCAAGAGTTAGAGGAAGTTGGTACACAACTCCGTCTTGGTGAAG
TCAAATTTTCAATGATGTATAAAGACACAGACGAGAAGCTCAAATTCATA
TTGAAATCTGTTTCAGTTTTTCTCAAACCCAGTCCTTCAGTTGTAGGTTG
TAATTGGGTTTGTGAGACAAACACAGTGCTCGAGGTTTTAAATTCCAAAA
AGAAGCCAATCGAAGTCAGTAACGGTCAAGAACTTCTTGTTGATTTCAAA
AAGACTGACGTCACTGACCATACATTACGTCTCACCGTTTACGACAATCG
ACGTAAGCACGTAAAGAACCCCGTCGGTCACGTGATTTTTCCGTTACGTG
ATGCAAGAAACCTGGGTAAAATGAACAGTTATTCGAAGAAACTAACCTTT
TATTCTCAGCCTGCAGGATTTAACAGAGGAAACGTAAACATCGCACTGTC
GTGGGGTATATCAGCTCAAAGGCTGGATGTGAAAATTGGTGACGTAACAA
ACTTAAGATGTCCAGCTTATGGTGTCAACGGAAAAGAATTCTTCATCAAG
ACGATCGTATTCATATTGGATAACAAATACAAGTCATACAAAACACCTCT
ACAACGCGCCACACCTGAACTAACATTCAAGGAAAAATTCACTATCCCTC
TCACATCTCCACAACTCAAAGACTCCACAATTACATTCCAATTATATTTA
AAACATTATAATAAAAAGAAGATTGGACATAAAGTGTTGGTTGGCAAAAC
AGTGATTGGACCTTACATGAGACATGGGGATCGTTCACTTTCCCAATGGG
AAAAAATGATTACTAATCCATTGGAAGAGGTATCTGAACAACACATTTTA
TTTTTATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004030XLOC_004030Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007188-exon-sc0000074-1575043694:181481..181679TCONS_00007188-exon-sc0000074-1575043694:181481..181679Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1575043694:180832..181033TCONS_00007188-exon-sc0000074-1575043694:180832..181033Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1575043694:172733..172793TCONS_00007188-exon-sc0000074-1575043694:172733..172793Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1575043694:171836..171910TCONS_00007188-exon-sc0000074-1575043694:171836..171910Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1575043694:171287..171420TCONS_00007188-exon-sc0000074-1575043694:171287..171420Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1575043694:170595..170759TCONS_00007188-exon-sc0000074-1575043694:170595..170759Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1575043694:169965..170189TCONS_00007188-exon-sc0000074-1575043694:169965..170189Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1575043694:169402..169528TCONS_00007188-exon-sc0000074-1575043694:169402..169528Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1575043694:168364..168980TCONS_00007188-exon-sc0000074-1575043694:168364..168980Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1510915933:181481..181679TCONS_00007188-exon-sc0000074-1510915933:181481..181679Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1510915933:180832..181033TCONS_00007188-exon-sc0000074-1510915933:180832..181033Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1510915933:172733..172793TCONS_00007188-exon-sc0000074-1510915933:172733..172793Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1510915933:171836..171910TCONS_00007188-exon-sc0000074-1510915933:171836..171910Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1510915933:171287..171420TCONS_00007188-exon-sc0000074-1510915933:171287..171420Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1510915933:170595..170759TCONS_00007188-exon-sc0000074-1510915933:170595..170759Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1510915933:169965..170189TCONS_00007188-exon-sc0000074-1510915933:169965..170189Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1510915933:169402..169528TCONS_00007188-exon-sc0000074-1510915933:169402..169528Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1510915933:168364..168980TCONS_00007188-exon-sc0000074-1510915933:168364..168980Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1491911889:181481..181679TCONS_00007188-exon-sc0000074-1491911889:181481..181679Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1491911889:180832..181033TCONS_00007188-exon-sc0000074-1491911889:180832..181033Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1491911889:172733..172793TCONS_00007188-exon-sc0000074-1491911889:172733..172793Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1491911889:171836..171910TCONS_00007188-exon-sc0000074-1491911889:171836..171910Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1491911889:171287..171420TCONS_00007188-exon-sc0000074-1491911889:171287..171420Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1491911889:170595..170759TCONS_00007188-exon-sc0000074-1491911889:170595..170759Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1491911889:169965..170189TCONS_00007188-exon-sc0000074-1491911889:169965..170189Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1491911889:169402..169528TCONS_00007188-exon-sc0000074-1491911889:169402..169528Clytia hemisphaericaexon
TCONS_00007188-exon-sc0000074-1491911889:168364..168980TCONS_00007188-exon-sc0000074-1491911889:168364..168980Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007188-proteinTCONS_00007188-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000074supercontigsc0000074:168364..181679 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.200183	0.158187	7.66992	7.28986	5.75152	7.79703	3.53005	5.21225	0.853606	0.791916	0.244759	0.306745	1.27459	1.58787	1.72681	3.1287	1.42458	1.06342	0.866073	1.25973	2.55029	3.41379	12.24	3.57395	0.225658	0.459822
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007188 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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