TCONS_00007208 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007208
Unique NameTCONS_00007208
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1844

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007208 ID=TCONS_00007208|Name=TCONS_00007208|organism=Clytia hemisphaerica|type=transcript|length=1844bp
agataaacaaacaagcaaacaaacagTAGAAAAATAAACACAAGCCAAAT
CAATGATGTTGGAGTTTGTGGAATTTTTGTCATCTTCTGATGATGAAGAA
GAACATGAAATGGATGAATGTGATTGGACGAGAACCAACCAATCAAAAGG
TGAAACAGCAACAAATGAAGCTATTGAAGAGCACACTGACAGTGATGATA
ACATCGAAACACCTCAAAGCAAAACCAAAGCAGTTTCAACAAAGTCCAAA
CCAGCCAACACACAAGCGAACAGAGAACAACAACAGAAAAAGAAAGAGAC
AATTGCGTTGATTAAACAACTAGCCACACATATCATCACAATGGAGAAAG
AGAAGAAATCGCAACTTTAcgcgaaaaagaaaaagagcgATGAACAACCG
TTTAAGAGTTTGGAAGAAATGGAAAACAAGTACAACTCCCAACGAAAGAT
AGAACGTGAAACGTTAAAAGACAATTTAAGTAAAACTGGAATAAAATTGG
AGAGATTCAAGCGTGATAAATTACCAGCACAGAAAAGCCCTGCTAatttg
gaaaaattgaagattttgatggAAGAAATCGAAGCTGATATTATGcagat
gaaagaaaaacaaaaattgatTTACGAAGATTTAATGATGGAGGAAAAAT
CATTGAGCATAGAAATCGAAAGCTGCAATAAAAAGTTTGACAATTGGTCC
AATAAAACACTTCCAATCCCTCAGAGTgctataaagaagaaaaatgaaga
gggAAAAGATGAGAGATTACCTGAAGAAGTCATCCTGTTCGAGaaatttg
tcCAAGTGACGAACGGGCATCAAGGAGGATGGGACGATATTGATCATCAA
CTGTTTGTCAAATTACAAAAACAATACAAGAAACCAAGTCAGTTCATGGA
GAAAGCTTTAGAAAGTATACCAACACACACCGAAAACGAGATCAAACAAC
ACGTCGAATGGTATCAACAATATACTGTCttgaatgaaaagaaaagagaa
gCAATCCGCAAatggaagaaaaataaaacgaatcgCAAAGACGACATGTT
ATCGAACTCGGACACAACGCTCGGAGAACGAGAagaaatggaaaagaaaa
aaaaacgcgATGAGATGTTCGAAAGAGAAAGACAAGAAAGAATTCTCCAA
TTACAAAAATGGAAGGCCATGAAGACGGAAGAAGAAGAGATGAAAAGaaa
taatgaagaaattttaaaagatgaacgtgaaaatctgaaaattcaaaaac
taaTGGAAGAAAAACGAAGGCTTGAAACAAAGATACAGATTCAAGAATAC
AAACTGAAGAGACGTGAAGAAGAAGACATCATGCAACAAATAAGGGAAGA
TGAAGAACGCCAAAAACGTAAACAACTTTCCACGCTGGAGAAAGAGAGGA
TCAGAGAAAGAAATGAACGTATAATGGATCAAAAGAAGACGAAACAACTT
AGTGCCCAGGTTgcagaagaagaaaaggaagagaGATTGCGGAAGCTGAA
AGGAAGGATTAATATTCATGTCGAACGTGATCCGAACCGGTTACTCAAAC
CAACGGAAGGGTGGAAAAGGCGACAAAATGATACGGAAAACAACCGGACG
AAAGCGGATCACATGATTGGAACACGTGGTTTGCCTCACAGGGCAGTTCC
GTCATGGCGGCAAGGGATACCATGatagaaatgaaaatgaatgtACATTT
TATGAAGGATTTTATAAATCTTGTAAATAAGGAAGAATTTGTAAGTAGAA
AATTACACATAAAATTTTAAAGCTCATTTCCATAAAATGATTGCTATAAA
TTAATActatgaaatatattttgaggAAGAATGAATTACGGTAC
Run BLAST on NCBI

protein sequence of TCONS_00007208-protein

>TCONS_00007208-protein ID=TCONS_00007208-protein|Name=TCONS_00007208-protein|organism=Clytia hemisphaerica|type=polypeptide|length=540bp
MMLEFVEFLSSSDDEEEHEMDECDWTRTNQSKGETATNEAIEEHTDSDDN
IETPQSKTKAVSTKSKPANTQANREQQQKKKETIALIKQLATHIITMEKE
KKSQLYAKKKKSDEQPFKSLEEMENKYNSQRKIERETLKDNLSKTGIKLE
RFKRDKLPAQKSPANLEKLKILMEEIEADIMQMKEKQKLIYEDLMMEEKS
LSIEIESCNKKFDNWSNKTLPIPQSAIKKKNEEGKDERLPEEVILFEKFV
QVTNGHQGGWDDIDHQLFVKLQKQYKKPSQFMEKALESIPTHTENEIKQH
VEWYQQYTVLNEKKREAIRKWKKNKTNRKDDMLSNSDTTLGEREEMEKKK
KRDEMFERERQERILQLQKWKAMKTEEEEMKRNNEEILKDERENLKIQKL
MEEKRRLETKIQIQEYKLKRREEEDIMQQIREDEERQKRKQLSTLEKERI
RERNERIMDQKKTKQLSAQVAEEEKEERLRKLKGRINIHVERDPNRLLKP
TEGWKRRQNDTENNRTKADHMIGTRGLPHRAVPSWRQGIP
Run BLAST on NCBI

transcript from alignment at sc0000074:634006..645066-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007208 ID=TCONS_00007208|Name=TCONS_00007208|organism=Clytia hemisphaerica|type=transcript|length=11061bp|location=Sequence derived from alignment at sc0000074:634006..645066- (Clytia hemisphaerica)
AGATAAACAAACAAGCAAACAAACAGTAGAAAAATAAACACAAGCCAAAT
CAATGATGTTGGAGTTTGTGGAATTTTTGTCATCTTCTGATGATGAAGAA
GAACATGAAATGGATGAATGTGATTGGACGAGAACCAACCAATCAAAAGG
TACAATATTTCTTTGGGTAATCATTTCTCTTGCAATGAAAAGTCATGGTT
TTATTGGTTCAAATTAAAAACGTATTTGCTATTTCATACCAACATTAACC
ATGAATGTGTTGTGACAATTACTAGTGCGCTGGAATCCTTTTCCCCCTAT
AATTCATAAATTGCCTCAATTCTAAGAAACCACACATCAAAATATCAAAA
ACAATAAAATAGAATACAATTAGACGACTAAAGATTATACGTCACCCAAC
GTCGTTTTGTTTATAAGTTCAAGCCTAGTATTCTAGTTAATCTAGTATTC
TCTAGTAGCCTAAAGCTTTACTGATTGATTCCTTTTCACTATTTACGCGC
GCAGGTGAAACAGCAACAAATGAAGCTATTGAAGAGCACACTGACAGTGA
TGATAACATCGAAACACCTCAAAGCAAAACCAAAGCAGTTTCAACAAAGT
CCAAACCAGCCAACACACAAGCGAACAGAGAACAACAACAGAAAAAGAAA
GAGACAATTGCGTTGATTAAACAACTAGCCACACAGTATGTTTTTAATGA
GACTATGTTCTAAGAATATTTGTGATGAATTGGTAAAAAAATAAGAACAT
GCTAAGAATATCACCATCATGGAATTTGGCAACAGAACCAGTATAAGAAT
ATTTTAAGGTTTTTCCCAAAAAGTTAAGAATATCCATAATGAAATGGAAA
ACACCATTCTTATAGATAAAGGGTGGAACGGATCGTGCTCCTTATATACT
ACTTTAATGGGATAAACTTTCGCGGGGATTAAATTTCGCGGATTTGTGTG
TCATCCGCGAAATTAAGTCCCAATGGAAATTTGGAAGGGCATCGCCCGCG
AAATATTTCTAAACAAAACTCAGAATATGTCAAATAAATACTTTTTGAAT
GGTTACTTGCATCAAAAAGGCGCTAATAATGCGTATTTCAGAAACCAACA
TGCATGATTTGATTGTAAAAGTCACAAAATCGTGAAAATATTGCCACCCA
ATAGTGCCACCCGCGAAATTAAGTCACCGCGAAGATTTTGAATTTCGCGG
ATAGGCCCAACAGCGAAATTTAATCCCCACGAAAGTTTATCCCATGAAAG
TATACTAATTGTGGTTTTGTAGATGCCTGTGTTGTCTGTATGCAAATTTT
TTTCCTTTACTCAAACTTTTTTCCTTTACTCAAACTGGAGTGATTTTTGA
TTTCTTCTTTCCAGTATCATCACAATGGAGAAAGAGAAGAAATCGCAACT
TTACGCGAAAAAGAAAAAGAGCGATGAACAACCGTTTAAGAGTTTGGAAG
AAATGGAAAACAAGTACAACTCCCAACGAAAGATAGAACGTAAGATGGTT
AAAGCAAAACCTTAGGGATCTGATCTGATCTAGACCTTGCAGATTATTTG
TATTTCGNACCGTTTAAGAGTTTGGAAGAAATGGAAAACAAGTACAACTC
CCAACGAAAGATAGAACGTAAGATGGTTAAAGCAAAACCTTAGGGATCTG
ATCTGATCTAGACCTTGCAGATTATTTTGTATTTCTGTGCTCTTTTCTGG
TTACATCAAGATGAGTTTAAAGAGATTCTCTCTTCTCTTGGGAAGAAATT
ATTTTTCGGGCTTGGCTATCGCATGTACAAAACAAGCAGACTTTGAGGAC
ATGTACCATCACTATAATATACAGGTATTTTGAAGCAGTGCAATTTGTTC
TTTTTGCATGGCGACGGGCCTACATAGCACGGAGCTGCCCGGCGTCAAGA
AATTTCATAAAATAGCATCATTTGCCTTTATTTTTCTTATCTGGTGTCAG
TAATTCACACGAATCTAGGGTAGGTATATCACATTATAGACCTTTATATA
TTAATAGCTTGGTCCAGGGCAAGCTATATCCGCCATCTTTGATCGAAGTT
TTTTTAAGTTTGTACCCGTAAAGAAGACATTGCAGTGTTAAAAACTAACG
TTTAACGGCGCTACATCATCAAAAGTTTTCGAGGAAAAGTAGATCTAGCT
CTCTCGATGCATTTACACCGCTATTGAGTAGTGCCGCCATTTGGGTACCA
CAAATACAATAATGACAGGACTGTAATGAAAATATTGCCCCCATTGTGCA
GCTCCGTGACATGTGTTTAACAATATTTTTTTGGAATGGCCCAACATGAG
CTCTTGAGAAATGTTTGACCAATCAATAATATAATCGATTCATATAATCA
TTCCATTACACAGGTGAAACGTTAAAAGACAATTTAAGTAAAACTGGAAT
AAAATTGGAGAGATTCAAGCGTGATAAATTACCAGCACAGAAAAGCCCTG
CTAGTAAGAGTATAAATTTTGTACGATCGATAATTTTTTGTGAAGGTATA
CACAATGCCCTTTAGACAACTCTGGTTCCTTCAGGTTCCTTCGGTAAAGT
TTACGATCTTTAATAAAACTTTGTAAACGATTTGAATAACGTTGGGTGTA
GCTCTAAACTAGATTGTTGATGGACTCCAAAACTTTTTTTTTGTGTAAAG
TTCTGTAAAGTTATATAAGGGCGGGCTGGCCCAAGGTGGGATAGATTTTC
GAACGCCACGTGATCTATTTTTAGCCATTTGGTTCGTCAAAAACTATGAC
GCAACGTCCGAAAATCCACCCATCTCACCTAGCCGGAACAGTCCCCTTCT
TAAGAAAACGTAGCGCTTAGAAACATTCAGATAACTTTCTAGCAGGCTCA
CCTCGCATTGGGCTTTTCCAGAAATAGTCCGTGACCCCCCTGTTGAGGAT
ATCGGATATCCAGGGAAGTTAAATATCTACAAGGGAGCGGATATCCAGGG
GGTAAAGTGCCTTTTCAAGTAAAAATACAATATCCAGGGGTAAGCAACTT
TATAAGAGAGGATATCCAGAAAGTTGAGCATATTTTTAAGAGTGGGTATC
TTTACTAATAAAGTAGGCTATCCAGGGGGTTCGATACTTCGAAAAATCAA
TATCCTCAACAGTGGGGGTAAGTTTTTTTTCTGGAAAAGCCCATTGATGG
TCTAAAACGGACGATTTTGCAAAAAGATTCTCACGATACATGAATGGTTG
ACTTTCTTCCTCTGTCTAGATTTGGAAAAATTGAAGATTTTGATGGAAGA
AATCGAAGCTGATATTATGCAGATGAAAGAAAAACAAAAATTGATGTAAG
TTTGATTTCATTGGCTTGAAAACTAGACTGCTGACTAGGCTGAGGTTTTT
AATTCCTTATGATTTGTAGATATCTGAAATTCAGACTACTGGTAACCATA
NGGTTTTTAATTCCTTATGATTTGTAGATATCTGAGATTCAGACTACTGG
TAACCATAGATTTATAAAGCCCGAAGGGCTCGAGGAAATCCTACCTAGGT
CACGTGACATTACCCCAATAAGAAGCTTCGCAGGTTTTCGAAAATAATAA
CAGTCATATTTTTTGCAATATTCTTTTTTTTGCTTGGAAGAGCTTAAAGC
ATGACATCTAGCCGTTCGGGCTTTGCAGAAATCTGTACTGGTAATCTGCA
TAAAATTCAAATTGCAGAACTGACTAAGCTAAAACTGTGACTCAATTTTG
ATCTGAATTAAAAAAAACTCACTTTAAATGGTCTACCTTTACAATGTTTA
GAATGTTTCTTTTACCAGTTACGAAGATTTAATGATGGAGGAAAAATCAT
TGAGCATAGAAATCGAAAGCTGCAATAAAAAGTTTGACAATTGGTCCAAT
AAAACACTTCCAATCCCTCAGAGTGCTATAAAGAAGAAAAATGAAGAGGG
AAAAGATGAGAGATTACCTGAAGAAGTCATCCTGTTCGAGGTAACGTGCT
ACTTTCCTTTCTGTCATTTCATTTTGTTGTGCAGGTCCAAGAGAACCGCT
CATGACAATTGATTTACACTGAATACCGTTTTTCATAATACAGTATTTAT
ATACTATCATAATGACATCATTCCTCCCTCGATTTTGATTTATTTATTTT
TAAGCACATTTTTTAAAAAGTAATAGGGTTCTTTCATGTTGACAACTATG
TGGTGGTAATAGTTTAAGTTAGAAGAGCCCAAATTATTTATTTTCGATGC
AAAGTAATGGCTTTTGTTATTATTGACAAAAACAAAAGCACGACAAAGTA
TGATTAACAAGAAAATTATTTTTTATCTGGAGGTAAAAAAGTTGGTCTTT
CTTTTGTTTAAAGGCCGGCGCATATGTATTTTGATGTTAGATGAAATGTT
GGATGCATTTGCGGCCTTAAAAGTACTTTTAAAGAAAAAGGTAGAAGAAA
TTATTTATTTTTTCAGAAATTTGTCCAAGTGACGAACGGGCATCAAGGAG
GATGGGACGATATTGATCATCAACTGTTTGTCAAATTACAAAAACAATAC
AAGGTACTGTATATGATTTGAAGTTGTGTTGGCATGTTGGATATGGTTTT
GCGGTCAACTCTATTATTCTAATTGTATCATGACAGGTCCTCGTAATCTT
AGAGAGGAAAAGAACTTTGTTTTTTCAAAGATTTTAGCTTTTTTCAGCTA
ATTATTCTTCGAAGGCTGAAAATACTCCATGTTCTAGATTGAGGCTACCC
CAGCAATCTAATTTACATTATTTTACCTGCCGGTTCAAGTAAGCGGCCTT
CTGGTCTCCGTACTCTATTTTAGAATTAGCGAGTTTACTACCAGCCTTCG
ACAGATAAAGGAGTCACTCAAACTAGAACAATCCTCAGTTGTGATCCGCA
CTTTCGAGTGCGACGATAAAAGTGTCGATTTACCACCATCCCCAGTCAAT
CAGGGTCTAAACAAAAACTTTATCTGCTACAGGAAACACAACACAAATAA
GCTCAATATTAAGAATTAGAATACTCTTGTAGCATGAAAGTTGAGCATCC
AGCTATGGCTATCGTGGTTTCGATTCCTAGCCGCAATCTCGGTCAAAATA
AAGTGAGAATTTTGGTTAATTCCTCGTTTTTAGAAATTTAAAGTTCGGGC
GAGAAAGTCGCTTTTGGGCTAATTGATAAATTTATGCGAATATTTCAATT
CGGGAGGGGTTTATAGACTTCCAGGCTATATTCTGAGCCCTATTGGACCA
TTCTTGGACTCCTAAGTCTTAAGTCTAGTGTCTAACTCTACCCTTCCAAC
CAAATTTAGGGCGCTTCCAAATCGTTTGTGGTTGTAGGATTTCGTGGAAA
TTTCCCTTCTTTTTCAAATATTATGACTTTGATTGCGGGTCATAACAAAG
ATTCCCAAAATAGTACTTGATACCTCTCTTCTTGATGCTCAACAACTAAA
CAGACAGATCAAGGCTAAGTCGAGAAATCCAGGGAGAAAGAGTGGTGCCC
TCCCCTACCTTTGGGTAGATAGCTTTTGTCTATGCTTTCCGAAACCAAGT
CAAGGAGAAGTCTTAAAGCATACCAATGCAGATGTATAGCCACTAAGAAT
TTTAATACGTTTTGTACCCTTATGATTCTTTGACTATGCTTTCAGAAACC
AAGTCAGTTCATGGAGAAAGCTTTAGAAAGTATACCAACACACACCGAAA
ACGAGATCAAACAACACGTCGAATGGTATCAACAATATACTGTCTTGAAT
GAAAAGAAAAGAGAAGCAATCCGCAAATGGAAGAAAAATAAAACGGTTAG
TCAAATGTTCTGTTTATTGGTTATTGAGAGCAACGGCATAGGGTACACCC
CACCATCCCCAGAAATTTGGGGGTACCGAAAAAAAGTGGTAAAAAAGCCA
GGTACCTGGAAGTAGTATTCTTAAATTCAGGGGGTACCTGATATGTTTCG
GGGTACCTGCATTTTCATTGGTGGGGATAAGGGCTGTTGTTTTGTATGAA
GTATTTTCCTTGACTAACCCAATTTTTCCAATTTTGAATCGAACCTTTTC
ATTCAGAAGACTTTATAACTTTATCTGTCTTTCTCTTTTCACCCAGTTTG
CTTCTTGTACACTGTACTTTAAATCACAGTGAAGGAGAACAAGCCAGTCT
CGTAAGGAGAAAACATATGTTTTCCCTGACCAAGAGGGTAACTCAAAGTT
GGGGGGCTACTTTAGAATTCTAAAGATTTTGGGGGTACCTAAATCTTTTG
GGGGTACCTGAACCCTGGAGGACCCTATGAATGGTGACAGTGACTAATAG
CTTATGAAGATGTTTGGAAATAAAAATTGATTCTTTGAACCTTTATTACG
CTATCACATCGCTAAAAAACTGCTTTTCATATCCCGAAGCTGACCGAGAA
TATAGAATTTTTAATTATGCAGAGAATCAGAAACATTGGTGTTCTTTTAT
ATTACATCTTGTCATCTACAACCCCGAGAGCTGGGGAGGTGATCTATGAC
AGACGCACGTGTAAGCATATATCATCTTACAATGCAATATCTGAATTTTC
CTAATTTACTTGTTGGCTGTCCGAAATTTTTTTTTCAGAATCGCAAAGAC
GACATGTTATCGAACTCGGACACAACGCTCGGAGAACGAGAAGAAATGGA
AAAGAAAAAAAAACGCGATGAGATGTTCGAAAGAGAAAGACAAGAAAGAA
TTCTCCAATTACAAAAATGGAAGGTTAGGTCGAATATATGAAAATATTTC
TGAGTAGATTCTTTCATTAGCTCCGACTCTAAGATCTGTCTCAATAAAAT
TTGCAAAAATCTACAAAAAGGCTGTATTTTTTATGTAGTTTGAATTAGAT
AGTGATTTCAGTGCTCGTTGGTTGAAATAATATTCAAAAGTGGAATATTA
TGAAATAGAAAAAAAATGAAACTGAAGAGAAAAAAAAAATTTTAAACGAA
ATATTACTAGTACTGTTTATATTTTTTGTAACTTTGTGTTTTGAAAAACA
AAAAGAAAAACATGATAAGGCGAGAACAATTTGATTAGTTGTTTGACGAG
GCCCGACCGACCCTAATATTCAAAAAATCGAAATAAAAATAAAATAGATT
TCGGTACTACTTTTTTATTTTCATTGGTTTACAGACTGCCAAATTTTCAA
AATATTTTGGTAGTTTTTCCAAGGTTTTGAGAATTTTATGTCCAATTTTT
CATTTAATCCATGAATTTGATGTCCAATTTTTCATTTAATCCATGAATTT
GAGCGTTTGTGTCTTTTTATTTTCTATTTCGCATTTTTGTCAAGTTGTAG
TAGTTTTTGCTGCCTTTTTAGGAGATTCTATACGTAAACTTCTACTTTTA
TATTTATTTTTCGCCGACTGAGCCTCTTTTTTGGGTAACTTGGCCCGTAA
AACAATAACATAAATTGGCCTCGCCTAACAAAATTTTTACTTATACATAA
ACAGGCCATGAAGACGGAAGAAGAAGAGATGAAAAGAAATAATGAAGAAA
TTTTAAAAGATGAACGTGAAAATCTGAAAATTCAAAAACTAATGGAAGAA
AAACGAAGGGTGAGTGTACATTGAATAATTTTTTTTATAACGATGATTTC
CCGTTAGTCGCATTAGAATAAAGTGCTANGAATATTTTTTTTATAACGAT
GATTTCCCGTTAGCCGCGTTAGAATAAAGTGCTCTGCTTGCGTTGATTTA
ATGTGATTTTGCTGAAAATAAATTTGACTCCTGATTTGCATAGAATTAAA
TGACTCCAAATTATTTGATTCCCAAATTAGCGAAAGCGAAGACCTTTTGA
TGTTGCCGGCCAAAGTGTTATGTTCTTTGGGCTATAATTGACCAACAAGC
AAAGAGCCTTTAAAGTGCGAACAACACTAAAACCCAGTGGTTGAGAGAAC
AAGAATGGTCTAATATCCATTAATTCATTATTCGTCTTAAAGATCTTGGA
AAATTTTTTTTCTCTAGTCATAATAATTTTAGCAAAACCTTTTTTTGTTT
TTCTTTTAACAGTACCGCAAGACCACCTCCTTAGTTTAGCTTTTGTCTTT
GAGTGTGGTCGCTAGTGTTAGTCTCGCTTTCTATATCAAAAAACATATCC
TTACTTTACTAAACTTAAGTACCAATAACTCATCCCCTTCTCACAGACCA
GGTAGGATTTTTCAGCCAGTAGAGGTAAAAATAATGGCTGAAACTCTATG
GGGATTGATATTCCCAAATTTTATGGCCTGGGATTTGAATTGCATTGCTT
CCGTTAAAAAAGGCAGTGTGTATGGAAGAAAAGCACAATATTTGGCAGCG
AGAATTGGTTTATTTGATTATATTTTTTTGAGGATAAAAATTGAAGTATT
GGAGGATAATTTCTACTTGGATGATATTTTGGCCTATCCCACCGGGTCTG
CGAGAAGGAGGTGTAATATATTGTACATACAATTTCTAGCTTGAAACAAA
GATACAGATTCCCTTACCGACTCTTTTAATGACTCTTACCTGTTCGAGCA
TCACCTCTTACTTTTCTAGCTTGAAACAAAGATACAGATTCCCTTACCGA
CTCTTTTCGTGACTTTTACCTGTTCGAGCATCACCTCTTACTTTTCTAGC
TTGAAACAAAGATACAGATTCCCTTACCGACTCTTTTAATGACTCTTACC
TGTTCGAGCATCACCTCTTACTTTTCTAGCTTGAAACAAAGATACAGATT
CCCTTACCGACTCTTTTAATGACTCTTACCTGTTCGAGCATCACCTCTTA
CTTTTCTAGCTTGAAACAAAGATACAGATTCCCTTACCGACTCTTTTTGT
GACTTTTACCTGTTCGAGCATCACCTCTTACTTTTCTAGCTTGAAACAAA
GATACAGATTCCCTTACCGACTCTTTTTGTGACTCTTACCTGTTCGAGCA
TCACCTCTTACTTTTCTAGCTTGAAACAAAGATACAGATTCAAGAATACA
AACTGAAGAGACGTGAAGAAGAAGACATCATGCAACAAATAAGGGAAGAT
GAAGAACGCCAAAAACGTAAACAACTTTCCACGCTGGAGAAAGAGAGGAT
CAGAGAAAGAGTGAGTGATTGCCTTTTCGTGACCTTTAACCGTCCGAGCG
TCATCTCTCACTACTTTTATTCATGACATTCATGACGTAATGTTTTCTGC
GGAAAGACCCTGGTTTTTACCAGTAACTTTTGAACTACACAAAAGTTGTA
TAAAATTTGCCACTACTGGCAAAAACCGGGGTGAGTATCGTGAATACCAG
GGGAAGCATCCCTCACCAAAAATATCAATTCATTTTAAGTTTTATATATT
TTATTCCAATCATAAGATTTTAATAGAGCTAAGTCTAAATAACACCATTT
AAATAGAGCTAAAGGCTTTGTTAAGCTGAAGAGGATGACTTGGTATCTAT
ATTGGAAATGGTAAACTTTATCATTAGATCTTCGTTTTCATTCAAAAACA
TTCGATCTTGACGTTCGATTTTGTGACAGTGAAGCAGATCTTCGATATCG
ATTTCCCTTTTCAACTATTCAAAATCAATGTTTATATTGAGGGGATAATC
AGGTGGTTTGGGATATTTGGCATGTGGAATGCTTCTATTGTCCTGAGCAA
AATCTCAAAATCTTTTTGCTTAAATATTTCCAAAGTCGACATAATTAAGT
TACAAAATAGAATTTGAACGTAAAAACCGTGTGAGAACCCATTTTTATTC
AGAAATTTTAACTGTTGTGATCTTGACTTTAGAATATAGTTAGATAAAAA
TACTTACCGATTTTACTCAAAACCACAGAGGGTTTCTTCAAGCAAAATAT
CCCAAACTGTCCGATTATCCCTTTAATGTCTATCACATTAGTTTAGAGGA
TGTGACAAATATTAAAATCTATACACTTTGATTCCAGAATGAACGTATAA
TGGATCAAAAGAAGACGAAACAACTTAGTGCCCAGGTTGCAGAAGAAGAA
AAGGAAGAGAGATTGCGGAAGCTGAAAGGAAGGGTATAAGAGAAGATTTG
ATTTTTTGGGGGCATTTTATGATGACGTCAATTTCCAGTACAAACCCCTG
CAAACAAGATTTTTAAGAAAGGTTTTCAAAAATAAATTTCGACCCTTTTG
CCTGAAAAATCATTCACAGATAACAAAAATAGGGTCAATCTAGTCAAAAA
AAAATCCAATACGACCCAAAGTTTGATATTTTATCTGTCGAGGCCATCAG
TTGCCCAGTTAGATTTGTAATTAAATATGGTTTATAGGTTTTCAATGGCT
AGGTTACGAGATATTTATGTTAAAATTTTCTTAATCAGCAAAATAACGTG
AACTATACTGGCTCTTATTTTTGTCTTTCCTATTGAAGATTAATATTCAT
GTCGAACGTGATCCGAACCGGTTACTCAAACCAACGGAAGGGTGGAAAAG
GCGACAAAATGATACGGAAAACAACCGGACGAAAGCGGATCACATGATTG
GAACACGTGGTTTGCCTCACAGGTACTGTTTTCTTATCTCATTGGGAATA
TTGAGTTTCAAGGCGAAGGCTAGAGGTGAATACTCAACCCTTCCCAAACA
AGTGAATTCGGGTCATATTTCGGGTAACTGATTGAATTTAACAGTTTCTT
TGTTTACGTGTTTTACATTATTTTTCGAATTATGGTGGTAAATGTTACTT
CCAATCCAGCGTTCATATGAAAACCACGCGGACCGCGAAACTTATGTAGG
AAATAAATCGCTTCAAATCCTACATAAGGGATTCTACTTTGGCCTTCAGC
TATACACCAAACGTAAATCTTGTGATCTAAGCCATGATATACCTTATTGC
TTTGGAACCGTTTAATGTGCAAAAAGTGTCAAATTTCAAAGGTAAAAGGG
TGTATTTAACCCTAGCTAAATCAGCTAGAAAATAATTTATTTCCTTTTTA
TCAAACAGGGCAGTTCCGTCATGGCGGCAAGGGATACCATGATAGAAATG
AAAATGAATGTACATTTTATGAAGGATTTTATAAATCTTGTAAATAAGGA
AGAATTTGTAAGTAGAAAATTACACATAAAATTTTAAAGCTCATTTCCAT
AAAATGATTGCTATAAATTAATACTATGAAATATATTTTGAGGAAGAATG
AATTACGGTAC

Coding sequence (CDS) from alignment at sc0000074:634006..645066-

>TCONS_00007208 ID=TCONS_00007208|Name=TCONS_00007208|organism=Clytia hemisphaerica|type=CDS|length=1623bp|location=Sequence derived from alignment at sc0000074:634006..645066- (Clytia hemisphaerica)
ATGATGTTGGAGTTTGTGGAATTTTTGTCATCTTCTGATGATGAAGAAGA
ACATGAAATGGATGAATGTGATTGGACGAGAACCAACCAATCAAAAGGTG
AAACAGCAACAAATGAAGCTATTGAAGAGCACACTGACAGTGATGATAAC
ATCGAAACACCTCAAAGCAAAACCAAAGCAGTTTCAACAAAGTCCAAACC
AGCCAACACACAAGCGAACAGAGAACAACAACAGAAAAAGAAAGAGACAA
TTGCGTTGATTAAACAACTAGCCACACATATCATCACAATGGAGAAAGAG
AAGAAATCGCAACTTTACGCGAAAAAGAAAAAGAGCGATGAACAACCGTT
TAAGAGTTTGGAAGAAATGGAAAACAAGTACAACTCCCAACGAAAGATAG
AACGTGAAACGTTAAAAGACAATTTAAGTAAAACTGGAATAAAATTGGAG
AGATTCAAGCGTGATAAATTACCAGCACAGAAAAGCCCTGCTAATTTGGA
AAAATTGAAGATTTTGATGGAAGAAATCGAAGCTGATATTATGCAGATGA
AAGAAAAACAAAAATTGATTTACGAAGATTTAATGATGGAGGAAAAATCA
TTGAGCATAGAAATCGAAAGCTGCAATAAAAAGTTTGACAATTGGTCCAA
TAAAACACTTCCAATCCCTCAGAGTGCTATAAAGAAGAAAAATGAAGAGG
GAAAAGATGAGAGATTACCTGAAGAAGTCATCCTGTTCGAGAAATTTGTC
CAAGTGACGAACGGGCATCAAGGAGGATGGGACGATATTGATCATCAACT
GTTTGTCAAATTACAAAAACAATACAAGAAACCAAGTCAGTTCATGGAGA
AAGCTTTAGAAAGTATACCAACACACACCGAAAACGAGATCAAACAACAC
GTCGAATGGTATCAACAATATACTGTCTTGAATGAAAAGAAAAGAGAAGC
AATCCGCAAATGGAAGAAAAATAAAACGAATCGCAAAGACGACATGTTAT
CGAACTCGGACACAACGCTCGGAGAACGAGAAGAAATGGAAAAGAAAAAA
AAACGCGATGAGATGTTCGAAAGAGAAAGACAAGAAAGAATTCTCCAATT
ACAAAAATGGAAGGCCATGAAGACGGAAGAAGAAGAGATGAAAAGAAATA
ATGAAGAAATTTTAAAAGATGAACGTGAAAATCTGAAAATTCAAAAACTA
ATGGAAGAAAAACGAAGGCTTGAAACAAAGATACAGATTCAAGAATACAA
ACTGAAGAGACGTGAAGAAGAAGACATCATGCAACAAATAAGGGAAGATG
AAGAACGCCAAAAACGTAAACAACTTTCCACGCTGGAGAAAGAGAGGATC
AGAGAAAGAAATGAACGTATAATGGATCAAAAGAAGACGAAACAACTTAG
TGCCCAGGTTGCAGAAGAAGAAAAGGAAGAGAGATTGCGGAAGCTGAAAG
GAAGGATTAATATTCATGTCGAACGTGATCCGAACCGGTTACTCAAACCA
ACGGAAGGGTGGAAAAGGCGACAAAATGATACGGAAAACAACCGGACGAA
AGCGGATCACATGATTGGAACACGTGGTTTGCCTCACAGGGCAGTTCCGT
CATGGCGGCAAGGGATACCATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004040XLOC_004040Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007208-proteinTCONS_00007208-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007208-exon-sc0000074-1575043694:644918..645066TCONS_00007208-exon-sc0000074-1575043694:644918..645066Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1575043694:644382..644562TCONS_00007208-exon-sc0000074-1575043694:644382..644562Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1575043694:643578..643702TCONS_00007208-exon-sc0000074-1575043694:643578..643702Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1575043694:642614..642703TCONS_00007208-exon-sc0000074-1575043694:642614..642703Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1575043694:641772..641847TCONS_00007208-exon-sc0000074-1575043694:641772..641847Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1575043694:641127..641298TCONS_00007208-exon-sc0000074-1575043694:641127..641298Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1575043694:640564..640650TCONS_00007208-exon-sc0000074-1575043694:640564..640650Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1575043694:639322..639471TCONS_00007208-exon-sc0000074-1575043694:639322..639471Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1575043694:638394..638528TCONS_00007208-exon-sc0000074-1575043694:638394..638528Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1575043694:637558..637662TCONS_00007208-exon-sc0000074-1575043694:637558..637662Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1575043694:636057..636197TCONS_00007208-exon-sc0000074-1575043694:636057..636197Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1575043694:635134..635229TCONS_00007208-exon-sc0000074-1575043694:635134..635229Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1575043694:634645..634778TCONS_00007208-exon-sc0000074-1575043694:634645..634778Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1575043694:634006..634208TCONS_00007208-exon-sc0000074-1575043694:634006..634208Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1510915933:644918..645066TCONS_00007208-exon-sc0000074-1510915933:644918..645066Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1510915933:644382..644562TCONS_00007208-exon-sc0000074-1510915933:644382..644562Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1510915933:643578..643702TCONS_00007208-exon-sc0000074-1510915933:643578..643702Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1510915933:642614..642703TCONS_00007208-exon-sc0000074-1510915933:642614..642703Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1510915933:641772..641847TCONS_00007208-exon-sc0000074-1510915933:641772..641847Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1510915933:641127..641298TCONS_00007208-exon-sc0000074-1510915933:641127..641298Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1510915933:640564..640650TCONS_00007208-exon-sc0000074-1510915933:640564..640650Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1510915933:639322..639471TCONS_00007208-exon-sc0000074-1510915933:639322..639471Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1510915933:638394..638528TCONS_00007208-exon-sc0000074-1510915933:638394..638528Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1510915933:637558..637662TCONS_00007208-exon-sc0000074-1510915933:637558..637662Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1510915933:636057..636197TCONS_00007208-exon-sc0000074-1510915933:636057..636197Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1510915933:635134..635229TCONS_00007208-exon-sc0000074-1510915933:635134..635229Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1510915933:634645..634778TCONS_00007208-exon-sc0000074-1510915933:634645..634778Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1510915933:634006..634208TCONS_00007208-exon-sc0000074-1510915933:634006..634208Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1491911889:644918..645066TCONS_00007208-exon-sc0000074-1491911889:644918..645066Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1491911889:644382..644562TCONS_00007208-exon-sc0000074-1491911889:644382..644562Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1491911889:643578..643702TCONS_00007208-exon-sc0000074-1491911889:643578..643702Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1491911889:642614..642703TCONS_00007208-exon-sc0000074-1491911889:642614..642703Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1491911889:641772..641847TCONS_00007208-exon-sc0000074-1491911889:641772..641847Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1491911889:641127..641298TCONS_00007208-exon-sc0000074-1491911889:641127..641298Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1491911889:640564..640650TCONS_00007208-exon-sc0000074-1491911889:640564..640650Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1491911889:639322..639471TCONS_00007208-exon-sc0000074-1491911889:639322..639471Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1491911889:638394..638528TCONS_00007208-exon-sc0000074-1491911889:638394..638528Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1491911889:637558..637662TCONS_00007208-exon-sc0000074-1491911889:637558..637662Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1491911889:636057..636197TCONS_00007208-exon-sc0000074-1491911889:636057..636197Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1491911889:635134..635229TCONS_00007208-exon-sc0000074-1491911889:635134..635229Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1491911889:634645..634778TCONS_00007208-exon-sc0000074-1491911889:634645..634778Clytia hemisphaericaexon
TCONS_00007208-exon-sc0000074-1491911889:634006..634208TCONS_00007208-exon-sc0000074-1491911889:634006..634208Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000074supercontigsc0000074:634006..645066 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.59811	3.80878	1.01439	1.34605	6.76578	5.91959	6.36061	5.56296	4.16904	3.55353	4.74853	4.59553	4.11127	4.43615	3.20496	4.05937	3.24157	4.02374	2.07554	1.76202	2.79031	2.67086	1.95173	3.08186	12.9299	14.1595	1.36866	0.603322	2.02307	2.22886
Blast
[Close]
BLAST of TCONS_00007208 vs. Swiss-Prot (Human)
Match: CC112 (Coiled-coil domain-containing protein 112 OS=Homo sapiens GN=CCDC112 PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 8.650e-34
Identity = 87/218 (39.91%), Postives = 135/218 (61.93%), Query Frame = 2 
Query:  410 LEEMENKYNSQRKIERETLKDNLSKTGIKLERFKRDKLPAQKSPANXXXXXXXXXXXXADIMQMKEKQKLIYEDLMMEEKSLSIEIESCNKKFDNWS--NKTLPIPQSAIKKKNEEGK--DERLPEEVILFEKFVQVTNGHQGGWDDIDHQLFVKLQKQYKKPSQFMEKALESIPTHTENEIKQHVEWYQQYTVLNEKKREAIRKWKKNKTNRKDDML 1051
            LEE+ENK    RK ER  ++  L+K    +++ +      + +P  +EKL+ +MEEIE  I   KE+Q+LIYE+L+ EEK+ + E+ + ++K D W+  N        AI  K    K     LPEEV+ FEKF+Q T G QG WDD DHQ FVK++ ++K    FME+ LE +P  T++E++QH +WYQ++  L E+K+E+I+ WK  K  +++++ 
Sbjct:   23 LEELENKLIHSRKTERAKIQQQLAKIHNNVKKLQHQLKDVKPTPDFVEKLREMMEEIENAINTFKEEQRLIYEELIKEEKTTNNELSAISRKIDTWALGNSETEKAFRAISSKVPVDKVTPSTLPEEVLDFEKFLQQTGGRQGAWDDYDHQNFVKVRNKHKGKPTFMEEVLEHLPGKTQDEVQQHEKWYQKFLALEERKKESIQIWKTKKQQKREEIF 240
The following BLAST results are available for this feature:
BLAST of TCONS_00007208 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CC1128.650e-3439.91Coiled-coil domain-containing protein 112 OS=Homo ... [more]
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