TCONS_00007243 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007243
Unique NameTCONS_00007243
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length762

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007243 ID=TCONS_00007243|Name=TCONS_00007243|organism=Clytia hemisphaerica|type=transcript|length=762bp
TATCACCttatagtataagaaagccgcggttGGAATGTTTGCCCCTAGCA
CTTTTTTATCACCTTATTGGATCATAGTATAAGAatgccgcggctttctt
atactatgattgtATGGCCTATAAAAAGAGCAGACGAATTTGACATTGTA
AGACACAACTCGAGCTTTTCCTGACTAATCATTCACATATCCAAGATGAA
ACTTTTGGTTTTGGCTCTTTGCATTGGACAGTGTTTATGTGCCAACCAAG
ATATCAtTATGTATTTCTGGGGTAACACATGGGGCCTTTGGGGACACTGG
GATAATTGTCCTCAGGGACATTACGTGGTCAAATATCAAACAAAACTGGA
GGGTCCTTTAGGGACAGGAGGTGATGACACGTCACTGAATGCAATAAGGA
TGACGTGTAGCGATGGTACCATTTTGAAAAGTCGTGAAGGGCCATGGGGA
TCGTGGCGCACTTTCTCACAAACTTGTCATAATGGATTTTATGGTGCATC
ATTAAAAGTTGAAGGACGTGTTGGATCTGGTGATGATACAACAACGAACG
GTATACAACTCCGTTGTCTTGACAACCAACAATGGTACCACACTAACGGA
GAAGGACCTTTCGGTCAATGGAGAACTATCCAACATTGTCCGCCAAAtta
cAAGATTGTTGGTTTGAAAACACAAGTGGAACCGCCACAAGGACAGCATG
AAGATGATACAGCACTAAATAGTGTCCGACTGAGATGTCATTGCAAATAT
TCAACCAACAGT
Run BLAST on NCBI

protein sequence of TCONS_00007243-protein

>TCONS_00007243-protein ID=TCONS_00007243-protein|Name=TCONS_00007243-protein|organism=Clytia hemisphaerica|type=polypeptide|length=189bp
MKLLVLALCIGQCLCANQDIIMYFWGNTWGLWGHWDNCPQGHYVVKYQTK
LEGPLGTGGDDTSLNAIRMTCSDGTILKSREGPWGSWRTFSQTCHNGFYG
ASLKVEGRVGSGDDTTTNGIQLRCLDNQQWYHTNGEGPFGQWRTIQHCPP
NYKIVGLKTQVEPPQGQHEDDTALNSVRLRCHCKYSTNS
Run BLAST on NCBI

transcript from alignment at sc0000075:30424..47549+

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007243 ID=TCONS_00007243|Name=TCONS_00007243|organism=Clytia hemisphaerica|type=transcript|length=17126bp|location=Sequence derived from alignment at sc0000075:30424..47549+ (Clytia hemisphaerica)
TATCACCttatagtataagaaagccgcggttGGAATGTTTGCCCCTAGCA
CTTTTTTATCACCTTATTGGATCATAGTATAAGAatgccgcggctttctt
atactatgattgtATGGCCTATAAAAAGAGCAGACGAATTTGACATTGTA
AGACACAACTCGAGCTTTTCCTGACTAATCATTCACATATCCAAGATGAA
ACTTTTGGTTTTGGCTCTTTGCATTGGACAGTGTTTATGTGCCAACCAAG
ATATCAGTAAGTTGAACATCATTTCGTTGTCTTTGTTTCAAAGTGCTACA
GAGTTAGATGCAACCTATACTTGCAATCCCAATTTGGATGTACATGTAAT
GACCATATCTTTGTCAAATTCCTTTTGAAGTATCCCTCTCAATTTAAAgc
ctttttgcaatttttacatcttgatatttttcttaaatttttttctagtT
ATGTATTTCTGGGGTAACACATGGGGCCTTTGGGGACACTGGGATAATTG
TCCTCAGGGACATTACGTGGTCAAATATCAAACAAAACTGGAGGGTCCTT
TAGGGACAGGAGGTGATGACACGTCACTGAATGCAATAAGGATGACGTGT
AGCGATGGTACCATTTTGAAAAGTCGTGAAGGGCCATGGGGATCGTGGCG
CACTTTCTCACAAACTTGTCATAATGGATTTTATGGTGCATCATTAAAAG
TTGAAGGACGTGTTGGAGTAGGTTTATCTTTGTGTTATTAAAGTTTTGGA
TATAGTAGGTATTTTTTCCTCACTGAATTGTCATCAATTAATGATTATTT
GAACTTCTTCATCACCATATCACAGACCATCCATGTCACCTGAAACTATA
TCCCAAGAGGTCAAATACACGAATTTCTATCTGCTCTAGGGAAAACACTC
AAATTTTTATCATCCctatttgattttgaaatccCCTACCAACAAGtaaa
ggaaagaaaatagaCACAGATTACTTTTGATCAAAGGTCTCAAATTTTAT
TAGTACAATATGCACTTGCTTCTTTTCTTTGCGTATTGATCATGCGCAAA
GTTACaccaaattaattatttttataacCTTTTTTAGTCTGGTGATGATA
CAACAACGAACGGTATACAACTCCGTTGTCTTGACAACCAACAATGGTAC
CACACTAACGGAGAAGGACCTTTCGGTCAATGGAGAACTATCCAACATTG
TCCGCCAAAGTAAGACCAACTCCTTCTTCTTAACTTCAGTTCAAGGGGAA
TCTTACAATGTATCTTCCCTGTTCGAAACTTTAGGTTAgtctaaataatt
caaaattgccAGATCTAGGGTAGCTTCAATTAGGTCTTTCAATGTTTAGT
AGAGCttataaacacccctgtctcacagcctcattggaacttttttactc
agtggggataaaaaatcctatcgaaatcccaatggggatagaaattctat
tgttccaaggttaaaaaatccagtggggatagttttggagtgcaattttt
ggacctacctaaggtagtcctttaaattgacccttgtccgttcgttcgtt
cgttcgttcgtccgttcgttcgtctgttgccagcttttctcgggatcggc
tcattagttttttctaattttttgcacaNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaatgctatattttctg
actgatttttttcatttttcttttcgcattgctaactaactttcatcatc
aggtaggtccattcagcatgttgcttgtttaactttgaatttctaatggg
gatgaattcaaaatcaatatcccagtgggactgaaatttcagagtatttt
cccaccggggaagaaatttctgccaaattttccagtgggctgGAGTCCAA
GCGGGTcggtgacacaggggtgtttatagTGTGAACCGCACTTTTGTCTA
TCATCATGATAATATCGTTATTCACACAGAGATGATAAAAGAGACGTTAA
AAATGAGTCCAAATATTGATTTTGTCAGTTCTATGACTTGagttttattc
tttttattttagttacAAGATTGTTGGTTTGAAAACACAAGTGGAACCGC
CACAAGGACAGCATGAAGATGATACAGCACTAAATAGTGTCCGACTGAGA
TGTAAATATTTTCCCTGAATCCTGAAATGATGACTCGTTGTTCTTGATCA
GATAAATATACTAATAAACTCCGAAAGCTACTCTTTTTATTGACTCAGAT
TCTTCATTTAGCAATATTAATTTCTATTAATATAACCTCGTGTGCAAGAA
GGTATACAATTACAACTCAAAAAGTTAGACATCTGAAAGCTTTGGAATTA
AATTCTTTTTGACCATGTATATCGAACACTTATTAACCTCTTAAGAGGAT
TGGGGTCTAGTTAATTTTTCGAGTTTACAAAGGTTGGATGACGTCAACTA
TCACGTCAATGCATTACATTCCACCCTGGTACAGCTAACGAGGGGTtgta
tacacccccttctcacggaCAAACTAGGACCTTTTCTCACTGGaaagatt
ggtcaaaatatcgtccccgatggaaaattatccttcaatttttgtgttga
aaataatcaaataaagcaatcctcgctgcaaaataatatgccattttttc
ccatccccactgaattttctgacttgacaacaaaagaattgaaatcccca
gccataaaaaacgttggaatatcaatccacatcgagtttcagtccgttat
atttatccccactggctgaaaaaatcccttcggatctgtgagaagggggt
gtttgtATGAATCGGTCGTGTTTCATGATTCTTTCAAGGGAGAAAGTACC
TtagaagaagaaattttggtgcaGTTTGgcggaattaatttttgcgattt
aataaaatttataaatttggtgagaattaattttggcgaatggcccATTT
TTGTTctatattttagctgaaaaaagaggaaaaaagagtttttaggagaa
atagagactaaattgaataaaaaattaaatttggcgagaatttattttgg
cgccTGAactataaatttaaatttggcggtactgtaagaaattttggtga
aattttTAGACTTTCTTTCCAAGGTTATTTCGAAATTTCAACGTAAAACG
TGAGATTGTTTTTACGTTTGctattttttggcaaaaaaaaaacaaattaa
tgaAACGACATTGTGTACAAACTGAAAATGAATGAATGGAATGAAAGACC
CTTTGCAAGGTACCAATCAAACTGTATTATTCAGTAAATGGCACAGAACA
ATATTTTTCGCTTTGGATGATGTCAGAAGTAGGGAAAACAGAACAGTTTG
TACTAAATACTAATCGAGTGTTTGTTTGGCCCTCAAAAGTGATAAATTGA
AAAGTACATTTTATGACTTCTCTTGGTGAATGAACAATTTAAACAACTTC
AAGTTTTCGATTTTGGCAATTCTCTTTCCTCTTTTACTTCAATAGTCGTT
ATACGGTTGGTAAAGTTCTATGAAACAGCAACTAACATatcaaataaata
ataattaaaaaaccAACGTAAAACATTACGGAAATTACAAGAAAATTGTA
TAAAATTCAACAACGTAAAAatatgtagaaaaaaaattgcataaaaTTGC
ATCTATTTACAAAAGGCTATAtcactttttttaattctctcaAATGGATA
TCATTTTCCCCAACAGTTCATCCTTTAAAACCAGCTTTTGATTAAACTCT
AACTAGAACAATTCCAGGGCTCATCGAATAAACGAATTATTTTGAATCGA
ACAGCAACAATTAAAAGTGATGatgccaacaaaacaaaacaaaagtgata
aaaaacaaaaatatttcaataaaattctTCTCTGTTTTAAAAGTGTTTAT
GATTTAAAATCTCATTGACGATTTCAATTTTTCTGCTAATTTATTTAATA
TGCGATCTCATGGACAGCGGCCCTGGTAAATGAAGGTCCTTGCATGTAAA
AGTCAGCTCTTTGTTTGGCAACTTTAGTACGTCTCATGCTACGGCGCCGA
AGATTCCAAGCCAACACTTCACCGTGTTCTTCTAATTCTTCGTGTGCCGG
TTCTTCTTTCAATTCATCATCATTGAAATCCCAAGCTGCTGTTTTACTTG
CTCCAGGTTTGAAAGGCGTTCGAGATACGAAATGCATCCAGGTCGAGATA
CGGTGANCTCTTGGTGAATGAACAATTTAAACAACTTCAAGTTTTCGATT
TTGGCAATTCTCTTTCCTCTTTTACTTCAATAGTCGTTTTACGGTTGGTA
AAGTTCTATGAAACAGCAACTAACATatcaaataaataataattaaaaaa
ccAACGTAAAACATTACGGAAATTACAAGAAAAATTGTATAAAATTCAAC
AACGTAAAAATATGTAGAAAAAAATTGCATAAAATTGCATCTATTTACAA
AAGGCTATAtcactttttttaattctctcaAATGGATATCATTTTCCCGC
CAACAGTTCATCCTTTAAAACCAGCTTTTGATTAAACTCTAACTAGAACA
ATTCCAGGGCTTATCGAATAAACGAATTATTTTGAATCGAACAGCAACAA
TTAAAAGTGATGATGCcaacaaaacaatttaaaagtgataaaaaacaaaa
atatttcaataaaattctTCTCTGTTTTAAAAGTGTTTATGATTTAAAAT
CTCATTGACGATTTCAATTTTTCTGCTAATTTATTTAATATGCGATCTCA
TGGACAGCGGCCCTGGTAAATGAAGGTCCTTGCATGTAGAAGTCAGCTCT
TTGTTTGGCAACTTTAGTACGTCTCATGCTACGGCGCCGAAGATTCCAAG
CCAACACTTCACCGTGTTCTTCTAATTCTTCGTGTGCCGGTTCTTCTTTC
AATTCATCATCATTGAAATCCCAAGCTGCTGTTTTACTTGCTCCAGGTTT
GAAAGGTGTTCTAGATACGAAATGCATCCAGGTCGAGATACGGTGAATGA
CCAGTGTGATGAACTGAATGATCATAATACATGCGTAGATAACCAAGAAA
GCGACGGACAAGAAATTGGAGTTGAGGACGGTCAGTTTTTGACCTTGATG
CAGTAAAGCCATCATGATAACCAACCATAAACAATTGGTAACAGCAAAGA
TGACCATAGCGGAGTTTCTCAATTCAAACAGTTTGGAATGGAGTTCTTCA
GATTGTGAAAAGGCACCTTGTTCAGTCAATAAACAGATCTTTCGTAATTT
ATCCCAGAAGACATACTCGTCATTGTTTTCTTCGGCTAAGTCATATGTGG
CAACCTTGTCCAATGCTAATTTGGCTTGTCGGATTTTTCGTTGTGCTGAA
ATTGAGAAAAGAATtatttggtttgaaattttgcgttgTTTTTGATTGGC
TTTTGTATGGTTTGAGTGCATAATAATTTGTATTTAGTTTTCAATAGTTA
TCAAGATTCATAAATAGACTACTATGGCTTTAAACACCAAAAGACTTGAA
ACACAGCAAGAAGCtgcatcaaaaaacttttgaaaatgtgataGACACTC
ACCAACTGTTGGGTATTTCAATTGTTTGATAGCTTTGGTTAATTTCTTCA
AGTGACCAGGTTTTGTCATTTCGAAAGTGGTAGAAAGGGTAGTTTTATCC
ATCAATTTCAAATCTGCCAAAGCATTGGGTTCAGAATAAGAATTGTCTTG
GAAGTGTCTCCAGTACTGAGCCAATCCAAGGACTCTCAACCATTCGTGAA
CATCTTCCTGTAAGGAGATAATGAAATCATGGATTGAATAAAATGTTTAT
AAGCTTTTCAAAGAAATGCTTTTGCCCATAAGCAAGATTTATTCATTATC
AGCATCACTCAGTTTTCAAGACCTAAAAGATCTCTTGTATCCGAATAATA
CGAAATCGTTGAATGAGATAAAATCTTAGATCTACTTACAGGGACATCCT
GGTCAATTTCTTCTGGTGGTAAACGGTTGATTTCACTCAAGATCTTCTTA
CGATGACCACGATTTTCGATTCCAATTTCAATCAAATCTGGTTCTTTCAT
TCCCATCAAGAATGTGGTATCATCATAACCAGCATCTTGGAATCGTTGCA
CATAAACAGCATATGGTCCATCCAACCAATCCTCGATCAACATAGTATAG
TAGAAGTCTTCTTCGTCCTCAGGTGCACCAATAAACATACCGTATTGATC
ATAACCTGgtaaaaaatataacataaGGATAATAGAATCATTCTTATTTG
CAGAAAAGAAATCTAAAATCGAAGATGGTAAATGACACTTAATGCCAATG
TTTATCACTGTTCGGTTTTTATATTTAAGTTTGAAATGCCTCACAAAGGC
AACAGTTCTTTAAGAGTGATCTAATACTACATACCACTTTGGTAAGCCAA
ATCATAGTCAAATTGTGCGCCGTCCATTCGTTGCATATTGGGTCTTCGTT
GAGATTGAAATTTACCCAATTCATTATGTGTTTTAGTCCATACAGATTGC
ATGATATGTTCATCACCACCAAAGCCAACTCCAGTGTATTcttcttcaaa
ttctttttcatcTTGTTGGAATTGTTGCACTTCGATGTGTTCTCTTGGTT
CTTGGAAGTCTGGTAATTCATcgtcttcatcttcttcatcgACTTGTAAT
AAAGCTTGTTTTTCAGGTGAAAGTCCTTTAGCACGACGTGTTGATTGACG
CTATTACAAAAGTTTTATAACAATATTAAAAACCTCGGTTTAAATGCGGT
TTAAAACTCGTTTCTTCTCCTTTCATTTGGTTTAAAAGCTTTGTAGCGAA
ATTTTGTCAGAATCTTAGGTAAACTGATGTTTGTTTCCAAAGATTAACAT
GTTCTTCTCTCAGGGCAAGATAGATTTAAGGTTCAAAGGTTATATTACAT
GATTGTTTCGAGGAAGTATAATCAAAGGGGCGTGACAAAAAAAAAGGTTG
ATCCTCACCTTAATGATAGCTTCTTTAACGGTGATCTTTTCAATCTCTTC
TTCTTCTGGTTCCTTCTCTTCTTTaacttcttctttcttttcatcttttc
cCATCAATTTATCACGCTCTTCTTTGAAGCAACAGAAGAAAACTTCACGG
AatttgaaccacaagcgatgATACCATGCCATATCGTTAGTGTTGACTTT
CTGTTTCTTCGCATTCCCTTCACGTGTTCCCCACGATCGATCAGTGATGT
TGACGATAGAGTAGACCATCAAGAAGATGTAACCGGATGGCAGACATAAA
AGATACCACATTCCGTGAACCAATTGTAAAGCTTCTCCGCCGTGTAAAAG
AGCAGTCGTTGAGAATAAACcaatcaagaaaaacaagaaaagcGTTGGTG
GTGTCAATTGAAGTTTGAACACTTTCAAGATGGTGTAATTCACTCCACCA
TGGATCAACTCCATGCTTTTAGGCAGCTCTTCAATCTCATATTTTGCTGG
AAGTGGAACTTGATCTGTATCGTTTGCAAGGAAATATTCAAAACCTTGGA
ATCGTTGTTTAGCCAAATCGTCGGCAATCTAGATAAAGGAGTTTAAGGAA
ACTTAGTGACTATTGATTCACAGTCAAGTCTATGTTTGTCTCTTAACAGT
TTTGAatctctaaaccaatcagataaTGAGGATCTACCTTTTAACCAATG
ATTAAACAAGTTTACTTCGactcaaccaatcaaaatggaGGATGCTTACC
TGTACCATCAAACCAACAATAGTGATTGTCATAATGATGGAATATAAGAA
AGTCAAAAGCTGAGCCACGTGAAGTTGTGTATCTTGTTTGTAATACATGC
AAACCCAAACGTAGAACAATACCAAGAATAAATTGATCAAGAAGGATTGT
GTGAGGGAGACAACAGCAGGGAAAGCAGCATTTAAACCAGATGAGACGAG
CAAGACGACGGTTCCAGGGCtagaatgaaacaaaaatattagattatatt
ttttttacattaggtTTCCTCTTAGTCCTCGATATGTCGAAAGTTAATAC
TTTTGTTTATGTGTTTTTTGTTGAATCTCAAAGTTTTTACGTTTGCTTAG
TTTCTTTAAATTGTACTGTCACGCGGGGCGTTATTCAGATCATGTTTCTT
AGTAAAGTAATTGACGAGAAGAGCTTACCCAATGATTGTAGAAACCAACA
TAAGAACTTGATAGATAATGAACACCAAATTGATATCATCGTTACTTTGA
CGGATGCTTCCTTGACGTTGAATCAATAAAGCTTGGTTAGCAAGTGTAGA
TGGACCCCAACGACGACGTTGTTTGAAAAACTCGTTAAATTCTTCTGGAC
AGTATGTGGTATCAGTGGCTGAAGCACAATAATCCAAACGCCATCCACGT
TCAACCATAAGCGTACAAAGCCAACGATCTTCACCTGTTTTGAGAGAAGA
GAATAatagttttgatcattttttgaaCAATGAGGTATTATTTTAATTGT
GATTATTTGTTATTAGAGTGTGtttgaaagaaattgaaattgctACATTT
GAAGGTGCAAAATTCAAAGTATGAAAATCGTCGTTCAACAACGACTTCTT
CAGAAAAATAACAACTAATAAAACACATACCCATATCCTTGGTTAAGAAA
TCCATAGCACATTCTACAGAGGAAGCGTATTGTGGGAGGATATCCTGAAT
AGCACGGCAACGGTAGACAGAGAAACATCCCGGAGAACAGAGTACAGATC
CCATCACATGTTCAGCAACTTTCAATAACCAATGACCGATAGCGTAATCA
AAAATCTGGTACCATACCATAGGTCCTGTACCCATAGGATGTGTTCGGCC
ACATACAGCGCCAACTGAAGGATCACGAGACATGAAATCCATAAGGGCGG
ATACATCTTCGGGATGGAATTTGACGTCAGCATCAGTTGTGAGGATGTAA
CTGTAGTCGTGGTTATCTAAAGAAAATCGAACAATGATATTATGTAGCAA
CTAGTTGCAAATTAATTGAGACTCCAAAGCTCTTAGCAGGATAACCGTTA
TCTGTAAccaatatataaaaataaagattCGTCTTTCGATTGAAACCTAA
acaattatttattttcttacatAATTATCAGCCAGCGTGTTTTATGCCTG
GTGAAAAGTCGtgtcaaaatatttgatttcaaaaacaaatttacaGCCTA
AGACATTAANagaaaatcaaacaattttattATATAGCAACTAGTTGCAA
ATTAATTAAGACTCAAAAGCTCTTAGCAGGATAACCGTTGTCTGTAACca
atataaaaataaagattCGTCGTTCGATTGAAGTCTTCTGAACCTAAACA
ATTATCCATTTTCTTACATAATCACCAGTCAGCGTGTTTTATGTCTCTTG
TCAAAAGGTGCATGTCAAGATATTTGATTCCAAAAACAAATGTACTAACC
TCTCTCCCTGTAATCCAAAACATAGGACATATACATGACCTGTGACCACC
TCTTCTTGTTCTTGACTTTGAAGTTATCTTTCATGTGAACATGGAAAGGC
ATGCCACCTGGTAGAGTCCAATATAATTCCATTCCGTAAGGTGTTAAGAT
CTTCTTCGCTTCTTCTGGTTGGACTTGAACAGTGTTTGGTAACAATGAAA
TCAATTGGATGGCGAATGTCTTCAATGTCTTGTCACGAACACCATCATCA
AACCAGATGTGACATTCAAACATACGTTCTTGGGATCTTCGGGCACGATC
AACTCCAGCAATTGAGTATAACAACTGTTCCATTTCGTAATCAGCTTCGT
GATACATTGTTGTGCAAATGTAGACGTGACTCTGTTTGACCAATGTTCGG
TAGTTGACAAAGAATTCGTTGGTAGCTTCGTTCTTTCGGTTTAACAACAT
GTTTTGTTCCAAGAGAGTTCCTATAGAATAAAGATTGAAGATTAAAGAAA
TATGAACTTTAGTACAAAAGTAGGCAATCGTTTTCATTTAGTATCTTGGA
TTTAAAAGTAACCATTTCATAAAGTTAAATGATAAGAAAGTCAACTTAAT
TTTATCTATTCAGCATTTTATAATAGNTAACAATTTTATATAGTTAAATG
ATAAGAAAGTCAACTTAATTTTATCTATTCAGCATTATATAATAACTTGG
AGATACTTGGTAATGTAAGAAATCTTACCATCCCAAGTCGGTACCCAGAA
AAGTGTTGCTTCTTCAGCCATAACGAAATCTTGACTTTTCCATGCATAAT
AAGTGGTAGCAAAGAATTGACCAAGCCATAAGGCAACGCTAAGAAGAGCG
ACCACAAATCCGTGTTGATTGTACAAGCTGGCTGGACATTCGCTTAAAGC
GAGGTAAGTGCAGCTCTTGGTAAGAACGATAACGATGCAGATAGGAGTTG
CGAATGTGAGGGGGATAGCAAAGCAGAGACGTTGCAGAGTGATCATGCAG
CCCATCCAGGCGAAATGATAACCGACGAAGCTGGTAATGATGTGGACAAG
GAACATTCCGAAGAGTGTTTTATTGGCTGTGATGTAGAAGAATCCATGAT
GGATGTTGGTGACATCGGCAGTTTCAAAGATGTATGTAAAGAAAGCCATG
AAGACCGGGATAGCGACAATCTTGATCATGCAATTGATTAAGGTAGCTTT
ACCACGAGATGTGTTGGTCTGGACGACGACTTTTTTAGCATCATCTTTGA
TGTTCGATTTCTTCTTTTGTGTTTTGGAATATTTAGTGGAGACGGTTGAT
GCAGCGTCACTGAAATCGActgatttctttgttttggtgCTGTCACCACG
GAAATAACGAACACGATGagcttttggtaatttttgttgttctaaagCTT
GATCGGAAGTGTCGGACCAAACGTAAGCAAGATCATGATCGATTTGTAAT
TTTCTGATCTTTGGACTCCATCCGATACCGATTAAAGTGATAGCGCATGG
GATAATGATCATCTGTTTGTAGTCCTTGTTGGTGTCATAAATCTGTTGAA
AAAATTGGGAATGAAAATCTTTAATTCTAAATCAGCTCTACTTATTTTCC
TGGTATAGAGCACTTTGCACAACACAAAGATTACCTATTCATGTTTCttc
gtttttgtttatttatttttatttactgTAGGGGGTCTAGGATTgaagaa
ttttatgttcaaagGCGATAATTTGAAGGACGTTTGGTTTGATCATTTTG
ATGTTATCATGAAAATGTCGTAGCATTCTTTTCCTTCAGTCGTAAATTTT
TGATGTATCAATTTGTCTCGAATTCCGAGCTGTTGACAACTTTAAAACCG
TTGCTTAGCTAGCCGGATAAGCGTCACGTCAATTAGAAAGGGCGTACGAA
ATAGCTCGCTAAttaacaaaaaagaagaaaaacactTGTCTTtcttggtt
ggttgatttttcaaattaaatcaaTTGGTATTTTTATCTATAGAAATTGA
TGATGTTGTTGATTGATATTGCATTTTGTTTATCAATAAATAGAAAGAAA
CCCACAGattggaaaaaatgaaatattagccttattaaaatgtcatcttt
tCACCACCACAATTAACAGAAAAGGGGACGTTACATcacaagaaattttt
taaagagaacAAAACAAATTCGACTCAAATCACCTGAGTAACGAAGACAT
TACCTAATACTTTTAATTAGTTTCTCTGTTTCCTTCTGCTCATCCggtat
tcttttgttttgtattAATGACCTCCCTCATTATGGCATTACCGAAACTT
TAATCATtcattgaatatatttttcctcttcaaatttaatttctttaaat
gtcagttcttcaatttttataagaaattgcAGTCCTTAGTTTTTTCCTTG
TAAATTGTGCATTATCTCTTAAAGaataagttcttataaattccttcaaa
aataagTCGGTCATTAATGACACCTATTGTTTCGGTCTAATGCGtcaaag
aataaaaataaagagaaccttttcaaagaaacttttttaGAATAACAAAT
TGGTATTTGACAATTTTTGGAGTGATTGGGTTTGAATTCCCCCCATATTC
CCAAAATGCGATTTCAAAACGACATTAAGAATTGTTACAGTAAAGCAGTG
CTTTTGTCCTGTTCAATTcaatagaaaatttcaaaagattctCACCAAGT
ATAAGATACCAATAATTCCACCAGCTTGGAAAACGAAAGCAATGGAGCTA
AGAATGACATTCTGAATGTGAATTTTTCGTCGTTTTTGGTATAGTTTTGG
TGAAAGTTCcatttcagcctcgttttgaagtGACTTGAATTCTTTGGTGA
ATTGTGAAATGACAGGAATGATGAATAAAGCATTCATTAGAATCAAAACA
ATATCAGTATCCATAACATGCATTACCAAACCGACAAAGAATAATGATAA
ACCAGCGGATTCCATAAGTGTACCGATAGCACCCTAAAAGTTGAAGAgta
aatttagttaaaattcatcCAAAACGACAAGTTAGCAAAGATCaagtaaa
aattcaaatttaaaaataatactttaaaatactttaaagtttaaagcaaa
atatgTCACTTCTTACCCATAAGATAGCGAGCTTGGTTGGCCATGGATGT
GTGATCTTACGGCATGTCTTGACGAACAATTTGATCAAAGTGACTGCAGG
GGGAATCATTAAAATGATACacagcataacaaagacaaccTCACGCATAC
AAACTTCGGCGTTCTCATATACAGCATAATGCGTCGAGTTGGTGGTTGTT
TTGCCACACAAAAATGCATGTTTAGTGTCGAAATGATCTGTAAGAGCCTT
ATCCGTTGGTTTATGGTAAACAAAGCCTTGTGCAATGCCGATGACTGTTA
ACTTGCTGACAACAACACAAAAGAGAGTGACTGAAGCTACAAAGACAGCT
AACAGGAATTTAAGTAATGATAAAGTCCTTGATGGTTTTTTATACCAACG
ATGCATATGGGAATCGACATCTTTACGTTCGACAGTGAATCGGTGTTCCG
GTTGACCAAGAACGGACTCCGTTCCTACAGTCATGCCATCAACCGTCATT
CCGTCAACGGTTGGTGAGTACATGCTATGTCTACCGATAGTGGTACCTCC
ATACTGGGATTTCCCATCGTAGTGGGATCTACCGTCGTAGGGGTATCCTG
CTTCAGATCGAGGGTTGTAGCCCCCATACACACTATCTTCGTACTCATAA
ATCATAGGGTTGGTCCTACCCAAGGTACTATTAGGAGTGTTTCCACCATT
GATGAGGTGGTCGAGGTCATAATCTGGTTTCATGTAAGGTTCTTGCATTT
CGTAGCTTCCACTGCCACTGTTACTACTGCCGTCAACGACCTAAATCGAT
TGGAAAAGTGATTTCAAACGAAGGGATCTATTGGAAGAAGTCGAACTAAA
ATCTAATCAGTTGTATCTAGTTTCAATTACTCAACAaagtgatttatttt
ctttgaattgcatttgaaatgaaagtgttatctacagggtgtccctaatt
gaagtatcgagtttgaacatgcgattgagtagaaaagtttgtgtgtgtta
tcgctaaaatataagaacgttctccatcacacaggcttattacaaaaggt
agttacaacctATGAATTAattgtaatgacaaagaaaaaatNACGAACAA
TTTGATCAAAGTGACTGCAGGGGGAATCATTAAAATGATACacagcataa
caaagacaaccTCACGCATACAAACTTCGGCGTTCTCATATACAGCATAA
TGCGTCGAGTTGGTGGTTGTTTTGCCACACAAAAATGCATGTTTAGTGTC
GANGAgagagagcttaaaatacaattttgtgaacacgcacataaaacttt
ctactcatagttgtgtttcgactcgatactttaattagggacaccctgta
gaggACTTAGGACTACCATTCCAGAcacaaaacaattttaaaagggAATC
AATATTAAAGTTCTTACAGGCTCGTTAAGTTCAGCGGGACTCCTTCTATT
CTCCTCGTCCGtcattttgatgacgttttaTTACTATTCGTACCAGTCCC
CTTGTCACCAATTTCTTTCTGTATCTTCTTAGTACCGATATTTTGTATTC
AGTTAATTTctattggaaaaaaaacaatagTAAAAGATAAATTTATACTC
AGTCGACGATCAAAATCATCAATTTCACCATAAAGATCACCGAGGCTTGT
TGATTATAGCCAAGTGAAcctttttgaaataattataattgtcatcaaga
tttaaaaaaactaaaatcaaaatatccaaGTCACGTAAAAAGATTCGCTC
ATTCTTGCTCAAGCCACCTTCTCTAAATGTGATTTATAATGAAACTGATT
CAACCTGTTCTGTTCTTCACTCTATTTTGTTCACTCAAAGAGGTAATTAT
GCTGGGGATAGGTAATTATTTCTTAATGACTTGTTATGTCATTTGGCAGT
TTTGCATTATGTAACCCTCTTCATTGTctaaatttgtcgttttttcaTCT
CAATTGCAATGATGTATCATTTTTTCTATTGCCATTTGTCACGtcattag
aacaatagaaacttCCAAAACAATAGACATAATTAACGACTTGATTGGTC
TAACTTCCTAAATGGAAACTGTATAAATTGTGTAAATGACTGAGTGAGGG
AAAGGATAAATTGTGCGTCAATTATGATTGATCAAATCTCTTTCGTAAAT
GAAACTACTTTTTTTTCGTACGGAACTAAAAACCATTTTGTCACTAGACA
ACGCAAAACGCGAAAAAAATTAAACCGCATTAATTATTACAGAGTTGTTA
TCCCCAGAAAAGGTTTTATAATGactaattataaaaaaaatcgaagGAAA
AACATTATAGTGGGATTTTTGGGGTTAGAGTTACAGCATAGCCAACTATA
GATtgattgatttgttttttataaaagtgaCACTGCACATTTTATAAACA
GCCGACGGATAATTCTTTATTCGCCCATCACGCTTCACTTTAATTAAGCT
TAGGTAATAAGCTTAGACTGATGGAAGAATAAACATTCATTTCCCGTTGG
CGAACCCAGATTAGCGGACTCTGATGTTTCCTGCGGGTCAATGTCAAAGG
TTAGCCGACCATTTAGCGGAAGATTTTATACTAACGATTTTATCTaatcc
tacacgtttttttttttataagaacaaactatataagaacataaggcttt
gaggcccaaaaaattaagaacattctaagaacatgctaaaggctttggag
acttaaaaacatgcattttcttaagaaattacatcaaaatgttcaaaaaa
tgctgaaaataagaacattttaagaacatttttaggcttcaaatccaaaa
aactaagaacatccgaaggcttcgaaaatttttgacgttcttataaaaaa
aaaaacgtgtaccgaCTTTGTTATAATTTTCACTTaatgcaaaaatttct
ttgaaaatttaggTAACCTAAGTGACTGCTTTGACCTAGATCAAATTCTT
TCacagtttcatttttcaaagcatATAGTATTTGAAATCTCATACACAGC
TTAACCTCGTCAACTCTatctgattttttctttattttatacgGTGAAAC
TCGATGAAAACCCCCAGGTCGGTTTTTCAAAGTTATCtcatcgttttttt
ttttttgctagttCATATGAACCTCTTAAAAGtttcattgtatattttga
GAATAAAAAAAACGACATTCAAAACACACAAATGAATGTATAAACAGTAG
TATAATTCTGACTTAAATTCAGCCAATAATAAATAGATTTCTCATAATTA
TCCAACAATATCAACACATAGTCAGGCATACACCatatacaaaaacaaca
taGTCATTTTCCTCTCCAAAAGTCTCTCTACAACATACCAGATCAAAACA
TTAATCTTAATGTAGCCAAATTCCGTCTCACAAATAGACTTTTCAAAGCA
ACATGCAAATCTAATTTCGTGACgcgtttttctataaaaaggtCATTTTA
ACGGATGTGAATTAGAGTTATCATAGATCCAAACAATTGAATACCGTCAT
GGAAGGAAAATgaattttatcacttttttcaacaaaaaacgaagaaaaac
aatgtttttttgtATTCCagcaattttatgaaatttttttatcaagcaTA
TCAAGTGGGGATATCTAAATCTCGACCAATGTATTGTAATCTACACCTCA
CTGACCCTAATGCTATAAAGAGAGTGGAATCGAGGTTACCATGGCCGTAT
AGTGCCAAATTTTTGTATTATCAAGTTCGTCAATGTTAAGCCCATGTAAA
CTAAAATCCGCTCCGATTTAAACATTAACGTGATGACTGACAGGtgccat
tttttttcttgaacttcTATTTCACCATCAGAAAATTAAAACGGGATTAT
TCTATCAAAAACTACACCATTCTATCCTTTCTTCCTTTAAGGACTTTAAG
GTCATTGCAAATATTCAACCAACAGT

Coding sequence (CDS) from alignment at sc0000075:30424..47549+

>TCONS_00007243 ID=TCONS_00007243|Name=TCONS_00007243|organism=Clytia hemisphaerica|type=CDS|length=567bp|location=Sequence derived from alignment at sc0000075:30424..47549+ (Clytia hemisphaerica)
ATGAAACTTTTGGTTTTGGCTCTTTGCATTGGACAGTGTTTATGTGCCAA
CCAAGATATCAtTATGTATTTCTGGGGTAACACATGGGGCCTTTGGGGAC
ACTGGGATAATTGTCCTCAGGGACATTACGTGGTCAAATATCAAACAAAA
CTGGAGGGTCCTTTAGGGACAGGAGGTGATGACACGTCACTGAATGCAAT
AAGGATGACGTGTAGCGATGGTACCATTTTGAAAAGTCGTGAAGGGCCAT
GGGGATCGTGGCGCACTTTCTCACAAACTTGTCATAATGGATTTTATGGT
GCATCATTAAAAGTTGAAGGACGTGTTGGATCTGGTGATGATACAACAAC
GAACGGTATACAACTCCGTTGTCTTGACAACCAACAATGGTACCACACTA
ACGGAGAAGGACCTTTCGGTCAATGGAGAACTATCCAACATTGTCCGCCA
AAttacAAGATTGTTGGTTTGAAAACACAAGTGGAACCGCCACAAGGACA
GCATGAAGATGATACAGCACTAAATAGTGTCCGACTGAGATGTCATTGCA
AATATTCAACCAACAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004069XLOC_004069Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007243-proteinTCONS_00007243-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007243-exon-sc0000075-1491911889:30424..30679TCONS_00007243-exon-sc0000075-1491911889:30424..30679Clytia hemisphaericaexon
TCONS_00007243-exon-sc0000075-1510915933:30424..30679TCONS_00007243-exon-sc0000075-1510915933:30424..30679Clytia hemisphaericaexon
TCONS_00007243-exon-sc0000075-1575043694:30424..30679TCONS_00007243-exon-sc0000075-1575043694:30424..30679Clytia hemisphaericaexon
TCONS_00007243-exon-sc0000075-1491911889:30872..31140TCONS_00007243-exon-sc0000075-1491911889:30872..31140Clytia hemisphaericaexon
TCONS_00007243-exon-sc0000075-1510915933:30872..31140TCONS_00007243-exon-sc0000075-1510915933:30872..31140Clytia hemisphaericaexon
TCONS_00007243-exon-sc0000075-1575043694:30872..31140TCONS_00007243-exon-sc0000075-1575043694:30872..31140Clytia hemisphaericaexon
TCONS_00007243-exon-sc0000075-1491911889:31511..31632TCONS_00007243-exon-sc0000075-1491911889:31511..31632Clytia hemisphaericaexon
TCONS_00007243-exon-sc0000075-1510915933:31511..31632TCONS_00007243-exon-sc0000075-1510915933:31511..31632Clytia hemisphaericaexon
TCONS_00007243-exon-sc0000075-1575043694:31511..31632TCONS_00007243-exon-sc0000075-1575043694:31511..31632Clytia hemisphaericaexon
TCONS_00007243-exon-sc0000075-1491911889:33186..33274TCONS_00007243-exon-sc0000075-1491911889:33186..33274Clytia hemisphaericaexon
TCONS_00007243-exon-sc0000075-1510915933:33186..33274TCONS_00007243-exon-sc0000075-1510915933:33186..33274Clytia hemisphaericaexon
TCONS_00007243-exon-sc0000075-1575043694:33186..33274TCONS_00007243-exon-sc0000075-1575043694:33186..33274Clytia hemisphaericaexon
TCONS_00007243-exon-sc0000075-1491911889:47524..47549TCONS_00007243-exon-sc0000075-1491911889:47524..47549Clytia hemisphaericaexon
TCONS_00007243-exon-sc0000075-1510915933:47524..47549TCONS_00007243-exon-sc0000075-1510915933:47524..47549Clytia hemisphaericaexon
TCONS_00007243-exon-sc0000075-1575043694:47524..47549TCONS_00007243-exon-sc0000075-1575043694:47524..47549Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000075supercontigsc0000075:30424..47549 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.12831	0.0625613	0.145279	0.142133	0.173033	0.0683666	0.164963	0.617745	0.270311	0.200894	0.324988	0.384542	0.128003	0	0.109288	0.27366	69.8334	99.566	0.0681982	0.142729	715.502	630.917	229.872	343.674	685.291	476.978	11.7879	8.63726	0.142414	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR005515VOMI
Blast
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BLAST of TCONS_00007243 vs. Swiss-Prot (Human)
Match: VMO1 (Vitelline membrane outer layer protein 1 homolog OS=Homo sapiens GN=VMO1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.245e-23
Identity = 63/171 (36.84%), Postives = 86/171 (50.29%), Query Frame = 1 
Query:  253 IIMYFWGNTWGLWGHWDNCPQGHYVVKYQTKLEGPLGTGGDDTSLNAIRMTCSDGTIL------KSREGPWGSWRTFSQTCHNGFY--GASLKVEGRVGSGDDTTTNGIQLRCLDNQQWYHTNGE-GPFGQWRTIQHCPPNYKIVGLKTQVEPPQGQHEDDTALNSVRLRC 738
            +I    G  WG W   + CP G +   +  K+E P G  GDDT+LN IR+ C+ G +L      +S+ G WG W +    C  G Y    SL+VE     GD+T  N ++ RC D ++        G FG W    HCP      GL+T+++ P+G   DDTALN  RL C
Sbjct:   35 VIEVTSGGPWGDWAWPEMCPDGFFASGFSLKVEPPQGIPGDDTALNGIRLHCARGNVLGNTHVVESQSGSWGEW-SEPLWCRGGAYLVAFSLRVEAPTTLGDNTAANNVRFRCSDGEELQGPGLSWGDFGDWS--DHCPKG--ACGLQTKIQGPRGLG-DDTALNDARLFC 199
The following BLAST results are available for this feature:
BLAST of TCONS_00007243 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VMO12.245e-2336.84Vitelline membrane outer layer protein 1 homolog O... [more]
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