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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007250 ID=TCONS_00007250|Name=TCONS_00007250|organism=Clytia hemisphaerica|type=transcript|length=826bp
GCATATTGTAAAAATTACGAGCAAATCGTAAGCCGTTGTATGTAAACTGG
ATAATACAATAAAAATGACAATCATGTTATTATAATAATTAcataagaaa
aataatacaTTTTATATCGATTTGAATATTTACAAAATGGAACTTTATAC
AAATTTTCACAATTAGAAAGTAAACTATAGAAAAGCTACaatctttctaa
aaaaataacataTTGCCATACTAATTACTCTCTTTCTAAGTGGTCTGCCT
AGTAAAGCTACTTAACAAAACGACCAATTATACCAGATTTATCCCATGAT
TTGAAAGGAAGCACACATACAGCTTGTTGTAAATTTCATGAAAAGTTCAA
ATCACTGTAACAGTAATTTACCATGCAAATCAACAATCTCAAAACCAAAA
TTCGGAGTTGAATCGTTCAAATGGTAGCCACCAAACCTTTGACAGTTAGT
TCATTAGCAATACGGGCACGTACTGGATTCTTTGAAGGGTCATAATGTTC
TAAAACACGCTTAATTATGTGATTATAGGTCGGTGTTGTTTTCTTTAAAG
ACTGGGCACTAGTCCGTCTACGCCTTTCCTCCGCCGAGCGTAATTTGATA
CCCTCTCTTGGCGGCATAGCATCGTGCGGCATCCAACCTGGGTCCATATa
tttttgatgtttataatGTCTAGTTGCTTTTGATATAGAAAGCTCACTCA
GTTTACGACATTGTAATGCGTGGTTTTGGACCTGATTCACGAAACGATCG
TTATCTATTGCATTGTTTGCGTTACTATGGTGATGTAATCTTGGATTCTG
ATTGGTCGATGCTACTGGCGGCCGAT Run BLAST on NCBI transcript from alignment at sc0000075:199758..200788+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007250 ID=TCONS_00007250|Name=TCONS_00007250|organism=Clytia hemisphaerica|type=transcript|length=1031bp|location=Sequence derived from alignment at sc0000075:199758..200788+ (Clytia hemisphaerica)
GCATATTGTAAAAATTACGAGCAAATCGTAAGCCGTTGTATGTAAACTGG
ATAATACAATAAAAATGACAATCATGTTATTATAATAATTAcataagaaa
aataatacaTTTTATATCGATTTGAATATTTACAAAATGGAACTTTATAC
AAATTTTCACAATTAGAAAGTAAACTATAGAAAAGCTACaatctttctaa
aaaaataacataTTGCCATACTAATTACTCTCTTTCTAAGTGGTCTGCCT
AGTAAAGCTACTTAACAAAACGACCAATTATACCAGATTTATCCCATGAT
TTGAAAGGAAGCACACATACAGCTTGTTGTAAATTTCATGAAAAGTTCAA
ATCACTGCCATTGAAGCAATACGTCCAATCCCAAAATTAATGTCTGAGAA
AACTGAGATTTTGGCTtgctaattttaatagatcctTCTCAATACAAAAA
AGAGCCAATcttaaaatttaagttagcaaagcaaataaaatctgTTTTCT
CAGACACTAATTCTGATGAGATTGGGCCTCCTGCTCCAATGGCAGCGAAA
TAATATACTAGGTAACAGTAATTTACCATGCAAATCAACAATCTCAAAAC
CAAAATTCGGAGTTGAATCGTTCAAATGGTAGCCACCAAACCTTTGACAG
TTAGTTCATTAGCAATACGGGCACGTACTGGATTCTTTGAAGGGTCATAA
TGTTCTAAAACACGCTTAATTATGTGATTATAGGTCGGTGTTGTTTTCTT
TAAAGACTGGGCACTAGTCCGTCTACGCCTTTCCTCCGCCGAGCGTAATT
TGATACCCTCTCTTGGCGGCATAGCATCGTGCGGCATCCAACCTGGGTCC
ATATatttttgatgtttataatGTCTAGTTGCTTTTGATATAGAAAGCTC
ACTCAGTTTACGACATTGTAATGCGTGGTTTTGGACCTGATTCACGAAAC
GATCGTTATCTATTGCATTGTTTGCGTTACTATGGTGATGTAATCTTGGA
TTCTGATTGGTCGATGCTACTGGCGGCCGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007250-exon-sc0000075-1491911889:199758..200113 | TCONS_00007250-exon-sc0000075-1491911889:199758..200113 | Clytia hemisphaerica | exon |
| TCONS_00007250-exon-sc0000075-1510915933:199758..200113 | TCONS_00007250-exon-sc0000075-1510915933:199758..200113 | Clytia hemisphaerica | exon |
| TCONS_00007250-exon-sc0000075-1575043694:199758..200113 | TCONS_00007250-exon-sc0000075-1575043694:199758..200113 | Clytia hemisphaerica | exon |
| TCONS_00007250-exon-sc0000075-1491911889:200319..200788 | TCONS_00007250-exon-sc0000075-1491911889:200319..200788 | Clytia hemisphaerica | exon |
| TCONS_00007250-exon-sc0000075-1510915933:200319..200788 | TCONS_00007250-exon-sc0000075-1510915933:200319..200788 | Clytia hemisphaerica | exon |
| TCONS_00007250-exon-sc0000075-1575043694:200319..200788 | TCONS_00007250-exon-sc0000075-1575043694:200319..200788 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000075 | supercontig | sc0000075:199758..200788 + |
Blast
The following BLAST results are available for this feature:
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