TCONS_00007271 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007271
Unique NameTCONS_00007271
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1118

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007271 ID=TCONS_00007271|Name=TCONS_00007271|organism=Clytia hemisphaerica|type=transcript|length=1118bp
TCTGATTATTTGTATAAAGAATTCCCACACCACCAAGAAGGACACCTCAC
GCTTCTACGGATTTCATTGATCAATGCAAAGTGTTTAACGTTAGCTTCGA
TGGACCTCGGATTACCTAATTATATCATTTATGAATCCTCAAGGACTGCA
AAGAATATCAAAACGAAAGTATATTCAGATGTTTTCGAAGCACTGTTAGG
AGCAGTTCACATCGATCGCAACCCTAAGGGAATTCAATATTGTTACAAAA
TCATTGAAGTCTCCATATTATCTCGACTGAATGAATTCATCATCAACCAA
GAATGGTTGGATCCGAAATCACAACTGCAACAATGCTGTTTAAGTTTACG
ACGATTAGATGATGTCGGTGAAGACTATCCTATCTACACtaaaCAAAACG
AACACAATGAGAGTGGTATACATATTTTTGAAGtgtCAGTATCATTCAAA
GGAAAACAGCTCGGTGAAGGTACTGGAAGAAGtttGAAGGAAGCAGAAAA
AGATGCCGCAAAGGATGCACTTAAGAAAAATCACTTCGAACAACATGCAC
GTCAAAAGCGAATGATATACAAGAAATTCGGTCCCGCCCGAACAACCACC
GATACAGAAAAGGTGGAAGAGGGCGGCGAACCCTCTACTCCTAAACAGGA
GAGTGAGTGCAAGGTGGCTGAATTGAAGACAGATCAAGACACAAAGGAGA
GTGCACAATCGGTCACGAAGGAGGAGACAGCAAAACCACCAGTACCAAAA
AATAATGTCACTATTATTGCCATTGATTCAGATTAGATATTTCCATTTAT
GTTTACGAATATTACAGTTAGCAATGatttatcttttgttttattagTTT
AGTTAAAACATATATGaaattttgtgttgaaatattttttatgattttgt
ccttaattttttcttcattttatctTTGCGATTATAATCTAATTTTTAGG
TGCCGAAATACTGTAGTCTTATAGTTTCGTCACCTTAAAAGTTTCTTCTA
GGTGTGGTGGAAAAATGCACTGATAAAGATCTTATCTAAATTTTCGGCAC
CTAAAATATCATACGTATAACACATTAGAAGTGTATTTTTATTGGCGTTA
AATACATTGTTGGTGTAC
Run BLAST on NCBI

transcript from alignment at sc0000075:659116..667409+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007271 ID=TCONS_00007271|Name=TCONS_00007271|organism=Clytia hemisphaerica|type=transcript|length=8294bp|location=Sequence derived from alignment at sc0000075:659116..667409+ (Clytia hemisphaerica)
TCTGATTATTTGTATAAAGAATTCCCACACCACCAAGAAGGACACCTCAC
GGTATGTAAATTCAGATTTAAGATGGcggccgtagcatgaaggtagagca
tcgaACTACGGTGCGtaaggtcgtgggttcaatcccaGCTGGGTCATACT
AAAGACTTCGTATTTAGTATACAAATGGTACTTAGtatctctctgcttga
tgcagATATTAAGGGAAGGATCGAGGGTAAGTGGAGATATCCATAGAAAG
GAGTGGTGCCCTCCACTACCTTTGGGTCGAGTTTGACTGTGGTCGTAAAC
TTACTTACTCAGTTTTAGATTTTAATATCAAATCAGGTAACGTGCTAGAA
CATGATTACTAATCTGATAATTAAACCGGCTTCGATAATTTTAGCATGAT
TCGATAAAGGTcaattttcttcacttttttagCTTCTACGGATTTCATTG
ATCAATGCAAAGTGTTTAACGTTAGCTTCGATGGACCTCGGATTACCTAA
TTATATCATTTATGAATCCTCAAGGGTAAGCTATCAATTTTACACACTAC
ATGCNCCTCGGATTACCTAATTATATCATTTATGAATCCTCAAGGGTAAG
CTATTAATTTTACACActacatgcttttttttataaggactagTAAATTT
TGATTCAGGCCgagctgttcttaattttttgaaattttgagggcTGAATG
CTCTTACGGTGTTCtttaaaaatggatttaaaatcttttaaaattagtAA
TTTCTTAGTTATTTCGAAATCTGATGCTctgattgttcttaatttgccAA
Taggttttgacaaatttcagcctcaagttcttataaaattgttcttataa
aaaaagcttgtaataaatcaaaaaccTAATTTCTTACTTTGAATCGTTTA
ATCTGTTCAATTCTATGGTgctaaaaatttcaacttttgtggtttttaag
cctaaaaatcttattttcaacatttcgtAAGTATTTTACGGTGCAATTTA
CTTGAAAGCTCTAAAAgtcgaatttttttcaaattcctaaaTTTTTCTGC
TTCGGAAACCTTATGTTCTCGTATACTcctgtttgttcttataaaagaaa
cttgttctCCCTTGAACAAAAAGGTAAACGGGCGAATAGTAATTTTAAAT
GAATCTCACACTTTAATGTAGACGTATATAGTAAAGCCAGAAAGAATGAT
GGAGTGTTTTCCAATATNTTAAATGAATCTCACATTTTAATGTAGACGTA
TATAGTAAAGCCAGAAAGAATGATGGAGTGTTTTCCAATATAGTTTAAAA
CCTTATAAATAATCTTTATTTCTTCAGACTGCAAAGAATATCAAAACGAA
AGTATATTCAGATGTTTTCGAAGCACTGTTAGGAGCAGTTCACATCGATC
GCAACCCTAAGGGAATTCAATATTGTTACAAAATCATTGAAGTCTCCATA
TTATCTCGACTGAATGTAAGGCATTTTTAAATTGACAAGTCACGAATAGC
GTCAACAAGAAATACGACCCTCGAACGACTAATATAGCAATTTTCACCCC
TCTCCCTTTCCCGACATTTCTTATCCCTTTTAACATCTTCAATGGATGGA
TGAATCAATGGATTCGCTTGATCGAATTGATACTCCTAATTTAGTATCAT
GTAAGAAAGTTCTGTGTTGCACTAAACCaaaggtcaaaatttttctcacc
acaatgaaaataaaagaaacttttaacaCTCTTATTAATTTTCATCTTTT
CCATATCTCTTATTCCAGGAATTCATCATCAACCAAGAATGGTTGGATCC
GAAATCACAACTGCAACAATGCTGTTTAAGTTTACGACGATTAGATGATG
TCGGTGAAGACTATCCTATCTACACGTAAGCTTCTTCAAATCATCCGAAA
GTCTCCTTTACAGTCGGCAACaacgttcataacgtcaaaTGAAGGTTGTT
TTGCCAACTTGGTAATACAGCAACGAATTGTATATTAGTCAAGCTTTTAA
CTCTTATAGTACAGctttgctaattttttttgaattcacATTTATCTGTT
CTGTTTCAAGTAATTTTATGAggggatgaggggtatgtgcggacgggacc
tccaaaaaccgacccttagagagactgtttttttgctgaaaaggtgaccc
ttagagagacttttttgaaaaattgtcttcacttgaaatacaaaaaaact
cccaaaatcgtgaattttccgacccttagagagactaatttaaaactttc
tgatttttccgacccttagagagactttgaaaggtgaaaaaaccaaCCCT
TACCGTCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGTGAA
ATCATATAGAAATTAGTAGTTTCCAATAGTTTTCCCAAAACGAAATCAGG
TTACACGCGAAATTTCCGAGGTAATTTCCCGAAGCGGAAATTATGTCGAA
GTTTACAATGTAGTTTCCGGACAAAACGGGAAAAGtcgaaattcgaaatt
tccaatctTTCTAAAGTGCTAGTGTGCAAGTGGTTTACAGGTAGTGAAAT
TATGTATGTTTAGTTTCCACGAGAAAATTTAGTCGAAATTGCAAATGTAG
AAAAGAAACTTTGCGCATGAAACTCCGAGTTTCATCGAAAAGATTGCTTG
CAAATTAGTCAAATTCgagcgatttttgttcgaaatttttctcttcattT
AGGTGAAATAGGGCGATTATTCTGTCAATAATGTAACTTTTTAACTTTAG
CTTTAAAGTATTTAATATCCAATAAATACAACGGCCTATAATGCTTTAAG
AAAATCGTAAACATTTATAACTTATACGTTCATATTACATTTATTTTCTC
ATCATCATACCATTGAAAGtctatacaaaaaaatatatatatataacatA
AAGCTACAAGTAGGAAAGAAAGACTACATATCAAAATACCAAATatgatt
aaaattttcaaatgtgcatcgtttttaaaaatgacaatacaTCAAGAGGG
ACTCTTTGTAAGAACCAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTCTCGCTAATTTGAACTCGAACGGGAAATGTTATTTATTCGAATTA
AAAAAcgatttgaattatagaaattatTCTGGGCAATTTTACAATATATG
GTGGaaaataagttcgaattatagaaatattcaaatgatAGAAGCTCGAA
TAAGCGAGAGCTCACTGTAGTGGTAAACGCCCGGGTTATCTTAGGTGCTT
CCATATAAGACACTACtatgtcatgaatatcatgaatacggGATTTTTAA
TCTTTAGCGCATACAGCACCAACTGATACGACGCGCGAAATTCCCATACC
NATGAATACGGGATTTTTAATCTTTATCGCATACAGCACCAACTGATACG
ACGCGCGAAATTCCCATACTGATAAAGAAGTCTTGAGTTTTGAACCCACT
CCGCAATTCTCTTTGGACGTCTGTCATTACTACAGTTAAGCGAAAAAAAT
TGTCGTTTTTGTATTCCAAATGCTTTACttgacgttttttttttaatagt
ttGAAGGAAGCAGAAAAAGATGCCGCAAAGGATGCACTTAAGAAAAGTAa
gcttgttttctttttcaatgctTTTACACTTTCAATCACTGAGGGGGTGA
ACCCGTTGCATGCTCTTATATAGGTCTAGAGTTTGACTACTACATAAATC
AGTTTTCTCTATTAACGGATCGTAATTATGGGTGTGATAATACAATTGCT
GTTATGGGATAAATCatttttgctccggcctaggagcctttaattctctc
ttccgacaatcGTCAAGAtattttttgtctgtttatctaatccgatgatc
tattccgatttaacaaaaacggatcactgattccgataatactgtgattt
gattggccgaaaagtATTTAGAAGAGATGACTAACGAAAAGTCGTGGACT
GGTGAGCTGTGaatactggcaaatctcagtgaaaaattgatcattttcat
ccggttattcatgatgttttggacatgatttatgagaagtttgatggtGC
GTTGTACGTTGTACTGCTACTGTATACTGAATTCAAATACGTGTGTTTCT
CATGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCA
ttacccatttttgcctaattaTCCCCCTGGGGTTTCATCCAATTATGAGA
AAATTGTATTTATAgtaccgtattacttcaaataaacgccctcgttcttt
taaacgcccccttgaataaacgccctcctaaaattgaaaaaaattaaata
aacgccccgggcaTTTATTAGAAGTAATACGGTAGGTGCTTTGTCgattt
caaagaaattgaaTTTCAGTTTGCCAGTGCTGATCGAGTTAAAAGTTGTC
GTATTTTAATCTATATTTCCAGAATTAtttaatactttatttttttctaa
agcacagacattgattttgatattgtttttttctttttcagtaaaCAAAA
CGAACACAATGAGAGTGGTATACATATTTTTGAAGGTATGATTTTTCCAA
ttacgagatttattttagttgGGGAAAATTTAGTCAAGTCTGCTTTAATA
CAATATGCTGGACGAAAAACGGCATTAATCGAATTCAAATTACACAGTgt
ttttgtgctcgttgaaacaCGTTTCTACTACGGAGACGAAAAAGGCAATG
CTACGCCTTTTCCGTCTCCGTAGTAGATTCTATACAGACAAAGATCGTAT
TGTATCGCCTCAAATTCAAATTGACGGGGCGATCTTTACTCGAAAACTTT
TGAACAATTGAGTCTGTCATTTAAAGCATAGCTTGATCGATTTGACTCAT
GTTGGTTGTTGCAAACTAACTTCTGATTCtaaagatttttctaaaactta
tactacttcttttattttcagtgtCAGTATCATTCAAAGGAAAACAGCTC
GGTGAAGGTACTGGAAGAAGGTATTACCAGACATAACTAATTAATTGAAT
TTCATAATTCCAGTGAGAACTTTTAATCAATGGGTGAAAAcaaatgaatt
ttcaaattaaaaggtCGCGGTGAAGACTATCCATCATctattcgtgatat
tcatgccttaatgttttatacggaagcgcCCATAATAACGGATGTTTGCC
ACTCATTTTGAATTGAAACAACAGAATTACAGTTGGTTCTCGCTAATTTG
AACTCGAACGGGAAATGTTATTTATTCGAATTAAAAAAcgatttgaatta
tagaaattattctgggcaattttacaatctatggtggaaaataagttcga
attatagaaatattcaaatgatagaagctcgaataagcgagagttcaCTG
TAGTGGTAAACGCCCGGGTTATCTTAGGTGCTTCCATATAAGACACTACt
atgtcatgaatatcatgaatacggGATTTTTAATCTTTATCGCATACAGC
ACCAACTGATACGACGCGCGAAATTCCCATACTGATAAAGAAGTCTTGAG
TTTTGAACCCACTCCGCAATTCTCTTTGGACGTCTGTCATTACTACAGTT
AAGCGAAAAAAATTGTCGTTTTTGTATTCCAAATGCTTTACttgacgttt
tttttttaatagtttGAAGGAAGCAGAAAAAGATGCCGCAAAGGATGCAC
TTAAGAAAAGTAagcttgttttctttttcaatgctTTTACACTTTCAATC
ACTGAGGGGGTGAACCCGTTGCATGCTCTTATATAGGTCTAGAGTTTGAC
TACTACATAAATCAGTTTTCTCTATTAACGGATCGTAATTATGGGTGTGA
TAATACAATTGCTGTTATGGGataaatcattttttagacTACTTTCTCGA
CTACAGTACACtgccttctcacagacccagtgatAAATAACGGAttgaaa
cttgatggggattgatattcccatatttttggAATgcctggggatttaaa
ttccattgtttaagtcagaaaattcattggagatgggaaaaatagcataa
tattttgcagtgaggattggtttatttgattattttcagtggggacaaaa
attggagcaTAGTTTTCCACTTagaacgatattttggccaatctttcggg
aaggggtcccagtgggtctgtgagaagggggtgttacaATCTGATACTGC
TATATATTTCTAGTCTGGATTAGTTTACTTTTCGAGTATATGAATTAATT
TTTCTAACCGCAACTCGAGGACAGAATTGTCCTAATTTCATTGTCAAAAG
AAAAGTGGTCTGGTAATCGAGACTATGTATATCTTTCAGAATTTATCATC
TCTCTGATCTCTTTAATTCTTTATTCAGAAATCATAGTAGACCCACTAAG
CGTCATAATAATGCATTAGTCAAAGGGTAGATTTCAGatactctaaaaca
cccatcTATACTAAACTGTTCGTGTCCTCATACCACATTTAAACAATTCC
AATGGTATTATAGTAAACTCTCGAGATTCCTTATTTGTTTCTAGTCCCTC
TGTCCAAGGAAAAACCCTCtttaaatactttctataattcgaatctctct
gtaattcaaatAAGAATTCAAATAAGATCACCCGTCAGAGTTCGAACTGT
AGTACTAGCTTGTAGGATATGTTTGTGCTGATTTGATCGTTCTCTTACTC
ACCAGATCACTTCGAACAACATGCACGTCAAAAGCGAATGATATACAAGA
AATTCGGTCCCGCCCGAACAACCACCGATACAGAAAAGGTGGAAGAGGGC
GGCGAACCCTCTACTCCTAAACAGGAGAGTGAGTGCAAGGTGGCTGAATT
GAAGACAGATCAAGACACAAAGGAGAGTGCACAATCGGTCACGAAGGAGG
AGACAGCAAAACCACCAGTACCAAAAAATAATGTCACTATTATTGCCATT
GATTCAGATTAGATATTTCCATTTATGTTTACGAATATTACAGTTAGCAA
TGatttatcttttgttttattagTTTAGTTAAAACATATATGaaattttg
tgttgaaatattttttatgattttgtccttaattttttcttcattttatc
tTTGCGATTATAATCTAATTTTTAGGTGCCGAAATACTGTAGTCTTATAG
TTTCGTCACCTTAAAAGTTTCTTCTAGGTGTGGTGGAAAAATGCACTGAT
AAAGATCTTATCTAAATTTTCGGCACCTAAAATATCATACGTATAACACA
TTAGAAGTGTATTTTTATTGGCGTTAAATACATTGTTGGTGTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004084XLOC_004084Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007271-exon-sc0000075-1491911889:659116..659166TCONS_00007271-exon-sc0000075-1491911889:659116..659166Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1510915933:659116..659166TCONS_00007271-exon-sc0000075-1510915933:659116..659166Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1575043694:659116..659166TCONS_00007271-exon-sc0000075-1575043694:659116..659166Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1491911889:659548..659611TCONS_00007271-exon-sc0000075-1491911889:659548..659611Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1510915933:659548..659611TCONS_00007271-exon-sc0000075-1510915933:659548..659611Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1575043694:659548..659611TCONS_00007271-exon-sc0000075-1575043694:659548..659611Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1491911889:659682..659710TCONS_00007271-exon-sc0000075-1491911889:659682..659710Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1510915933:659682..659710TCONS_00007271-exon-sc0000075-1510915933:659682..659710Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1575043694:659682..659710TCONS_00007271-exon-sc0000075-1575043694:659682..659710Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1491911889:660443..660580TCONS_00007271-exon-sc0000075-1491911889:660443..660580Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1510915933:660443..660580TCONS_00007271-exon-sc0000075-1510915933:660443..660580Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1575043694:660443..660580TCONS_00007271-exon-sc0000075-1575043694:660443..660580Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1491911889:660884..660990TCONS_00007271-exon-sc0000075-1491911889:660884..660990Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1510915933:660884..660990TCONS_00007271-exon-sc0000075-1510915933:660884..660990Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1575043694:660884..660990TCONS_00007271-exon-sc0000075-1575043694:660884..660990Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1491911889:664657..664700TCONS_00007271-exon-sc0000075-1491911889:664657..664700Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1510915933:664657..664700TCONS_00007271-exon-sc0000075-1510915933:664657..664700Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1575043694:664657..664700TCONS_00007271-exon-sc0000075-1575043694:664657..664700Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1491911889:665087..665135TCONS_00007271-exon-sc0000075-1491911889:665087..665135Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1510915933:665087..665135TCONS_00007271-exon-sc0000075-1510915933:665087..665135Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1575043694:665087..665135TCONS_00007271-exon-sc0000075-1575043694:665087..665135Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1491911889:665778..665824TCONS_00007271-exon-sc0000075-1491911889:665778..665824Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1510915933:665778..665824TCONS_00007271-exon-sc0000075-1510915933:665778..665824Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1575043694:665778..665824TCONS_00007271-exon-sc0000075-1575043694:665778..665824Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1491911889:666821..667409TCONS_00007271-exon-sc0000075-1491911889:666821..667409Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1510915933:666821..667409TCONS_00007271-exon-sc0000075-1510915933:666821..667409Clytia hemisphaericaexon
TCONS_00007271-exon-sc0000075-1575043694:666821..667409TCONS_00007271-exon-sc0000075-1575043694:666821..667409Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000075supercontigsc0000075:659116..667409 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.66727	1.33387	0.137233	6.20103e-07	0	0	0	0	0	1.62911	0.219357	0	0	0	0	0	2.43368	0	0.558811	0.418842	0	0	2.00645	0.492432	0	0	0	0	0.473672	0
Blast
[Close]
BLAST of TCONS_00007271 vs. Swiss-Prot (Human)
Match: RNC (Ribonuclease 3 OS=Homo sapiens GN=DROSHA PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 9.569e-25
Identity = 73/194 (37.63%), Postives = 112/194 (57.73%), Query Frame = 1 
Query:    1 SDYLYKEFPHHQEGHLTLLRISLINAKCLTLASMDLGLPNYIIY-ESSRTAKNIKTKVYSDVFEALLGAVHIDRNPKGIQYCYKIIEVSILSRLNEFIINQEWLDPKXXXXXXXXXXXXXDDVGEDYPIYTKQNEHNESGIHIFEVSVSFKGKQLGEGTGRSXXXXXXXXXXXXXXXNHFEQHARQKRMIYKKF 579
            ++YL+  FP H EGHLTLLR SL+N +     + +LG+  Y I  + ++    ++TK  +D+ E+ + A++ID   K ++Y +  + V    RL EFI+NQ+W DPK    Q C    R +    D P+Y        S    + V+V FKG+++G G G S+++AE  AA DAL+K +F Q A QKR I +K+
Sbjct: 1159 TEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYAITNDKTKRPVALRTKTLADLLESFIAALYID---KDLEYVHTFMNVCFFPRLKEFILNQDWNDPK-SQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKY 1348
The following BLAST results are available for this feature:
BLAST of TCONS_00007271 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RNC9.569e-2537.63Ribonuclease 3 OS=Homo sapiens GN=DROSHA PE=1 SV=2[more]
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