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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007351 ID=TCONS_00007351|Name=TCONS_00007351|organism=Clytia hemisphaerica|type=transcript|length=1218bp
AAAAACTGTTGAATAGGACTATGAAACTGACCGTCAAAACCTGCAGTTCT
GAAAGTCGATAGGTTCAAATCCTTGAACtagtttcaatttcaaaataatc
cTCCTACAAGGACGGTCGAGTAGTAGAATCTAAGGGTCTTCGTTTTTCTC
CTTTGTTGTTTACCAGGTTAATCTTTGAAAGTGCCATTCAACAAGCTTTG
GTTTTTGGGGTCAAACTTCACGACTCTTCTGTTAAGTATCTTACAGAACA
AATTGTTATAAAAGacgtaaaaatgaaattttaaaaatcatctaCAGCTT
AAACAAACCAAGTCAAAGCTAGAAGATCATTGAAGCCTCGTCTTTAAATC
GTCGAAATATCAGCAAAAATGGCTCAACGAGAAACAGGATCGAAATATGC
CATCAAACTTAAACCGAACTTTGATCATCCAAAATGGATCAATAGACATA
GATTTATGTTCAACTTTTTGGACATCAACGGTAACGGAAAAATCACTTTG
GATGAGATTGTCTCCAAAGCTTCGGATGATATCTGCGCCAAATTGAACGC
AACAACAGAACAAACACAACGTCATCAAGATGCTGTTGAAGCTTTCTTTA
AAGCCATTGGTATGGATTACGGCAAAGAAGTTGAATTCCCAGAATTCCCT
GAAGGATGGAAACGACTTGCTACCAAACGATTTGAAGTTATGGTCTCAAA
ACAAGACCACTTTGATTCGCCGATGGGGAGATGTTGTTTTCGACATTTTC
GATAAAGATGGAAGCGGTACAATCAGTTTGGACGAATGGAAAGCTTACGG
AAGAGTCTCCNGCTACCAACGATTTGAAGTTATGGTCTCAAAACAAGACC
ACTTTGATTCGCCGCTGGGGAGATGTTGTTTTCGACATTTTCGATAAAGA
TGGAAGCGGTACAATCAGTTTGGACGAATGGAAAGCTTATGGAAGAGTCT
CCGGAATCTGTGCATCAGACGCAGACGCCGAGCAGACCTTCAAACATTGC
GATTTGGACAACAGTGGCAAACTTGATGTTGATGAGATGACCAGACAACA
TTTAGGATTCTGGTACACCTTGGATCCACAAGCTGATGGTCTTTATGGAA
ATTTCGttccttaaaatattcttgtaCTGAATGAACTTTATTTAATATTA
TCCTGTGTAGGCTACATTTCATAGGACCCGTTTTCTAAACACATTAAATA
CATTAATATCATTAAGAC Run BLAST on NCBI protein sequence of TCONS_00007351-protein >TCONS_00007351-protein ID=TCONS_00007351-protein|Name=TCONS_00007351-protein|organism=Clytia hemisphaerica|type=polypeptide|length=128bp
MAQRETGSKYAIKLKPNFDHPKWINRHRFMFNFLDINGNGKITLDEIVSK
ASDDICAKLNATTEQTQRHQDAVEAFFKAIGMDYGKEVEFPEFPEGWKRL
ATKRFEVMVSKQDHFDSPMGRCCFRHFR Run BLAST on NCBI transcript from alignment at sc0000075:490215..491432 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007351 ID=TCONS_00007351|Name=TCONS_00007351|organism=Clytia hemisphaerica|type=transcript|length=1218bp|location=Sequence derived from alignment at sc0000075:490215..491432 (Clytia hemisphaerica)
GTCTTAATGATATTAATGTATTTAATGTGTTTAGAAAACGGGTCCTATGA
AATGTAGCCTACACAGGATAATATTAAATAAAGTTCATTCAGtacaagaa
tattttaaggaaCGAAATTTCCATAAAGACCATCAGCTTGTGGATCCAAG
GTGTACCAGAATCCTAAATGTTGTCTGGTCATCTCATCAACATCAAGTTT
GCCACTGTTGTCCAAATCGCAATGTTTGAAGGTCTGCTCGGCGTCTGCGT
CTGATGCACAGATTCCGGAGACTCTTCCATAAGCTTTCCATTCGTCCAAA
CTGATTGTACCGCTTCCATCTTTATCGAAAATGTCGAAAACAACATCTCC
CCAGCGGCGAATCAAAGTGGTCTTGTTTTGAGACCATAACTTCAAATCGT
TGGTAGCNGGAGACTCTTCCGTAAGCTTTCCATTCGTCCAAACTGATTGT
ACCGCTTCCATCTTTATCGAAAATGTCGAAAACAACATCTCCCCATCGGC
GAATCAAAGTGGTCTTGTTTTGAGACCATAACTTCAAATCGTTTGGTAGC
AAGTCGTTTCCATCCTTCAGGGAATTCTGGGAATTCAACTTCTTTGCCGT
AATCCATACCAATGGCTTTAAAGAAAGCTTCAACAGCATCTTGATGACGT
TGTGTTTGTTCTGTTGTTGCGTTCAATTTGGCGCAGATATCATCCGAAGC
TTTGGAGACAATCTCATCCAAAGTGATTTTTCCGTTACCGTTGATGTCCA
AAAAGTTGAACATAAATCTATGTCTATTGATCCATTTTGGATGATCAAAG
TTCGGTTTAAGTTTGATGGCATATTTCGATCCTGTTTCTCGTTGAGCCAT
TTTTGCTGATATTTCGACGATTTAAAGACGAGGCTTCAATGATCTTCTAG
CTTTGACTTGGTTTGTTTAAGCTGtagatgatttttaaaatttcattttt
acgtCTTTTATAACAATTTGTTCTGTAAGATACTTAACAGAAGAGTCGTG
AAGTTTGACCCCAAAAACCAAAGCTTGTTGAATGGCACTTTCAAAGATTA
ACCTGGTAAACAACAAAGGAGAAAAACGAAGACCCTTAGATTCTACTACT
CGACCGTCCTTGTAGGAggattattttgaaattgaaactaGTTCAAGGAT
TTGAACCTATCGACTTTCAGAACTGCAGGTTTTGACGGTCAGTTTCATAG
TCCTATTCAACAGTTTTT Coding sequence (CDS) from alignment at sc0000075:490215..491432 >TCONS_00007351 ID=TCONS_00007351|Name=TCONS_00007351|organism=Clytia hemisphaerica|type=CDS|length=387bp|location=Sequence derived from alignment at sc0000075:490215..491432 (Clytia hemisphaerica)
TTATCGAAAATGTCGAAAACAACATCTCCCCATCGGCGAATCAAAGTGGT
CTTGTTTTGAGACCATAACTTCAAATCGTTTGGTAGCAAGTCGTTTCCAT
CCTTCAGGGAATTCTGGGAATTCAACTTCTTTGCCGTAATCCATACCAAT
GGCTTTAAAGAAAGCTTCAACAGCATCTTGATGACGTTGTGTTTGTTCTG
TTGTTGCGTTCAATTTGGCGCAGATATCATCCGAAGCTTTGGAGACAATC
TCATCCAAAGTGATTTTTCCGTTACCGTTGATGTCCAAAAAGTTGAACAT
AAATCTATGTCTATTGATCCATTTTGGATGATCAAAGTTCGGTTTAAGTT
TGATGGCATATTTCGATCCTGTTTCTCGTTGAGCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007351-exon-sc0000075-1491911889:490215..491432 | TCONS_00007351-exon-sc0000075-1491911889:490215..491432 | Clytia hemisphaerica | exon |
| TCONS_00007351-exon-sc0000075-1510915933:490215..491432 | TCONS_00007351-exon-sc0000075-1510915933:490215..491432 | Clytia hemisphaerica | exon |
| TCONS_00007351-exon-sc0000075-1575043694:490215..491432 | TCONS_00007351-exon-sc0000075-1575043694:490215..491432 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000075 | supercontig | sc0000075:490215..491432 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005509 | calcium ion binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005509 |
calcium ion binding |
Blast
The following BLAST results are available for this feature:
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