TCONS_00007413 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007413
Unique NameTCONS_00007413
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2534

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007413 ID=TCONS_00007413|Name=TCONS_00007413|organism=Clytia hemisphaerica|type=transcript|length=2534bp
gaatttcacaaaaatgaccTAAACATATCGACAagtcaaaaacaaattta
agaTTGGAAAGTAGAACAACTATCAGTACAAAAATGTTTGTTTGGTATAA
GTTATCCGGCCTATTTCCTGCAGTTTTAATGCTATTTATTACAATCACCA
CCGATTGTGCTCGCCCAGAAAAGAAAGATGTGATTGTAGGTCTAATAAGT
AAATGTATGCAACGACCAATCGGTCAAAGAATTGCGATGGGATTAGTGAT
GAGTAAAAAGATTGGTATCTTGGCTAGAACAGGATTTATCGGCAGATACA
AGGAGTTTGACGTTTGTGAAGATGAGCGAGATCTTGTAGAGACACTGAAT
AAACTTTTACTGGAACCAGAATGGATTCTTAAAGACGAGCGATTGAGAAT
AAAAGGAATCATTGCATTTATACCTGAAAACTTACTGAAGTTGGCTGTCT
CAATATTATCCTACACTGACATAAAGgtttttccaATGTTTAAATTATCA
GATGACTATCGACGTTGGTCAGATAATTTTATTCATTTCGAACCAATTGT
TGCTATGATACCAGAAGATATTGTTgttgatatcatcaaaaaattcgaTT
GGAAGCACGTGGCTATtgttcaaatcaaaagaaattctatcGAAGACAAG
GATAAGTTAAAAATGGATAGGATTCGAAGAGAGTTACCAAACCTTTGTTT
TGATTACCAGAACCTAAATACGACGAGTGTAGCTATTGATGATGGCATCA
AAAGAAGGTTATTTGAGACATTGAAAAGAGACCAATCAGTAAAAGCTGTT
ATCATCAAGGGTGATCTAGCAGCTAAATTCATGTTAGACGCTGACAAATA
TGGTGTGAAAAAGTACTGGATCCTACTCTCACAATATCGAGAACCAGAAA
TAGCCCAAAATCACCCAGAATTCATTGGTATCGTTCGatcaatcaaaaat
tatcgatatCAGAAAATCGAGTACCATAACGACACGGTGTGCTCCCAACC
AACTAAAATCATGGAGGTTTTCAGACGCCAGGCAAAAAGTTGCTCCTCAA
CGGAAGTTTCTTCACAAAATTCCCGTTATCTTGTAGATGAAATTAAATAC
GCCTGGAGTATTTTGATACCAAACCGTTTAGTAGTTGTACGAACTATATT
AGAAGATGGTTTTTATAATTATATGGATGTTGTACAATTCTATAATAATA
AAGTTCATTCCAAACAACGAGTTAAGAAtctgaaaattactcaaaaagcT
ATCCAACTTGGTACTGGTCAATGCCGAGAATGTAAAGAATGCAAGAATCA
ATGCTTGAAGACAGGACCTCGTGTTGTTGAGCCTGTTAATTATACCAAAT
CATTCGCTCTCGGGTGTTTGAAATGTAGACAGGGTTTAATATTCGATCCG
GAATATGGGACCTGTACCGAATGCCCTATCCACACTATGGCTAATAAAAA
TCAAACTAAATGTTATGACCCTTACATCAAGGAAGATATATTCTTAGCGT
GTTATATCGTCAATGGTCTTGGATTACTCTTATGTCTTTTTACAGCATTT
GTATATTACAGACATAGAGATACACCTGTTGTTCGTTCAAGTGATTTCAC
GCTCACTATTATTCAACTGTTGCTATGTGCCACCATATTTGTTGCATTAC
CAATAGTAACGTTAGCTCCGTTATCTTGGTTTGTTTGCACTGTCAGACCA
TGTGTTTTTGGGATTCTCCTGGTAGCGATCGTATCCATTGTGGTATGCAA
AGCggagaaaattttgatcatATTTTACACGCGTCGGCGCTTAACACCAA
AGGATATTAAAGATCTTTATATTCGTCAGCTCTGTATCTTCTTATTCTTA
CTCATAATTGATATGATCATTTTACCGACAACTTTCCGACTACCATCGTC
GGTTAAAACTCGCAAATTCCCGACTACGAGTGACAATACGTACTTGATAC
GATATTGTAGTACCGATGATCGCTTCGATGTACAAATCGTGTATTGTATC
GTGCTTTTATTATTAGCGATCGCGCAAGGATATCGTGGTCGAAAACTGCC
AAGTAATTATAATGAAGGCAACTCAATCATCGTAAGTGCGTCATCCACGA
TTTgcgctttcattttcaaaatctggATAACAAACACACCACGACACCGA
TTCGAAAGAACATCTACAGTATGGTTATCTTTGAGTGTCAGTGTTCTGTT
ATTAATTCTACCTCTTTACGGACCAAAGGTATACATTATTTTACTTTTAC
CGCATAAAAACACTAAGAAACATATTATGAATCGAATGTTATCTGACAGT
TCTATGAAAAGATCTGAAGTAGCGTTTTCTTTTCGTAAACGACAAAGCAA
GAAACAATTACTGGATCCTTCTGATATCAAATTTCTCCCTAAAAACAATA
ATGATGACGGGGGTAGTGATGTTGATGGTAATGAGGATGAAATGATTGAG
ATGAACGACCTGTCAACGTGATTAATTTTTCCCTGAAACACTACCTGTCA
CGGCTGTGAATATTCATATCAAagctttcagaaa
Run BLAST on NCBI

protein sequence of TCONS_00007413-protein

>TCONS_00007413-protein ID=TCONS_00007413-protein|Name=TCONS_00007413-protein|organism=Clytia hemisphaerica|type=polypeptide|length=795bp
MFVWYKLSGLFPAVLMLFITITTDCARPEKKDVIVGLISKCMQRPIGQRI
AMGLVMSKKIGILARTGFIGRYKEFDVCEDERDLVETLNKLLLEPEWILK
DERLRIKGIIAFIPENLLKLAVSILSYTDIKVFPMFKLSDDYRRWSDNFI
HFEPIVAMIPEDIVVDIIKKFDWKHVAIVQIKRNSIEDKDKLKMDRIRRE
LPNLCFDYQNLNTTSVAIDDGIKRRLFETLKRDQSVKAVIIKGDLAAKFM
LDADKYGVKKYWILLSQYREPEIAQNHPEFIGIVRSIKNYRYQKIEYHND
TVCSQPTKIMEVFRRQAKSCSSTEVSSQNSRYLVDEIKYAWSILIPNRLV
VVRTILEDGFYNYMDVVQFYNNKVHSKQRVKNLKITQKAIQLGTGQCREC
KECKNQCLKTGPRVVEPVNYTKSFALGCLKCRQGLIFDPEYGTCTECPIH
TMANKNQTKCYDPYIKEDIFLACYIVNGLGLLLCLFTAFVYYRHRDTPVV
RSSDFTLTIIQLLLCATIFVALPIVTLAPLSWFVCTVRPCVFGILLVAIV
SIVVCKAEKILIIFYTRRRLTPKDIKDLYIRQLCIFLFLLIIDMIILPTT
FRLPSSVKTRKFPTTSDNTYLIRYCSTDDRFDVQIVYCIVLLLLAIAQGY
RGRKLPSNYNEGNSIIVSASSTICAFIFKIWITNTPRHRFERTSTVWLSL
SVSVLLLILPLYGPKVYIILLLPHKNTKKHIMNRMLSDSSMKRSEVAFSF
RKRQSKKQLLDPSDIKFLPKNNNDDGGSDVDGNEDEMIEMNDLST
Run BLAST on NCBI

transcript from alignment at sc0000076:697457..701948-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007413 ID=TCONS_00007413|Name=TCONS_00007413|organism=Clytia hemisphaerica|type=transcript|length=4492bp|location=Sequence derived from alignment at sc0000076:697457..701948- (Clytia hemisphaerica)
GAATTTCACAAAAATGACCTAAACATATCGACAAGTCAAAAACAAATTTA
AGATTGGAAAGTAGAACAACTATCAGTACAAAAATGTTTGTTTGGTATAA
GTTATCCGGCCTATTTCCTGCAGTTTTAATGCTATTTATTACAATCACCA
CCGATTGTGCTCGCCCAGAAAAGAAAGATGTGATTGTAGGTCTAATAAGT
AAATGTATGCAACGACCAATCGGTCAAAGAATTGCGATGGGATTAGTGAT
GAGTAAAAAGATTGGTATCTTGGCTAGAACAGGATTTATCGGCAGATACA
AGGAGTTTGACGTTTGTGAAGATGAGCGAGATCTTGTAGAGACACTGAAT
AAACTTTTACTGGAACCAGAATGGATTCTTAAAGACGAGCGATTGAGAAT
AAAAGGAATCATTGCATTTATACCTGAAAACTTACTGAAGTTGGCTGTCT
CAATATTATCCTACACTGACATAAAGGTAGGGGATTTAATGCCATTTCAT
TCTTCTATAGACCTTTTCGCCTTTGCGTCCGCCATATTGAATTGTATGCA
AAAATACAGGAACGAAAATGCCGTGGTTGGATTTAGTTGGAATGTATGCA
AAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATTTGTG
CTGGAATTTATTTAGGAAGCTTTATATTTGATCATCAGATCATTATTTTG
TCAAAATAAGTCATTTTGACAATGTAAGGACAATATAATAATTAATGAGA
TTGAAATCTCTAAAACTGGCCTTCCCAGCTTTTTCATACTGACAATTTCT
ATTTATTCATAATAAAGGCATCTCATTCGGTACAATTAAAATATTTGGTG
TAATAAAGTTTACAGGCATCACACTTAATTGCAAGAAAATGACTGGTAAC
GTCAAAAGTCACTTTTAGTATTCTCTAGCTAGAGTAATTCTCAGCCACGT
GCTCAGTGGTTTATTTGAAAGCCACATCAGGACTCGATTTGGACGTTCTC
TACGGTGGAGAGAGCAGGTAAACTCGATAACCCAAATTTATCTGGTCGCT
GGTCGTGGTCGCTGGTCGTGGTCACCATTTCTGGTCGATGTTTAGAAACT
CCCAGTACACACATCAAACTTTCAAAACACGCAAACTGAAAGCAGTAATT
ATGACGTCACACTTTATCAATGTTTTGATTTGATCATTTGGCGCCTCTAT
TCCCAGGAGAATAATTTGCCGTCAGCCGAATAAGGATTGTTTTTTACCTT
CGCGGGTGATTTTTCAGTTTGAGATTCTGTCTAATGTTATGGTCTTTNNN
NNNNNNNNNNCCACGGCAATTCGGCAACCATAATTTTTGCATACAATTCA
ATATGGCGGACGCAAAGGCGAAAAGGTCTATTTGGGTCGTATTTTGGACT
TGGCAGCGTGGGTTACGGACGTGTCCAAACGGTTGATTTTTGGCATTATT
CTTCTTATCGGAGTGGTTTATTTTATGAAAATACAGACTACTCATTTATG
ACCATCGTTGCGTGACGTAACTGGACATTTTATTTTTCACGCTGAAGATT
GTCACAAAAGTGGCATGAGACTGCCAGTAACAGAATAAAAAAGTGTCTTT
TCTTCCTGACTGATTATTTTTTACGCTATTAATCTTTTACGAACCTGGTC
CAGAATCACAGGCTCTATGACCCGATGACAAACTGAATTTTTAACTTGTT
ATTTGCTTGTATTTTTTTTCAGGTTTTTCCAATGTTTAAATTATCAGATG
ACTATCGACGTTGGTCAGATAATTTTATTCATTTCGAACCAATTGTTGCT
ATGATACCAGAAGATATTGTTGTTGATATCATCAAAAAATTCGATTGGAA
GCACGTGGCTATTGTTCAAATCAAAAGAAATTCTATCGAAGACAAGGATA
AGTTAAAAATGGATAGGATTCGAAGAGAGTTACCAAACCTTTGTTTTGAT
TACCAGAACCTAAATACGACGAGTGTAGCTATTGATGATGGCATCAAAAG
AAGGTTATTTGAGACATTGAAAAGAGACCAATCAGTAAAAGCTGTTATCA
TCAAGGGTATGTAAAACTTAAATCAAGTCACTGCTCTACACACGTCACGC
TATAACTTGACATCGAGCCCCTCGGTAGCCAGTATCCCCAATAATCATCA
ATCATTATCCTCATTAGCCACCAGTAACCCCATGTATCCACCTTCGTTGA
CCATGTAAACTTTTTATTGATCAACTACTACTCTCATAAACAATATTTTA
ACTGCGCGTACCCCCCGAAAAAAAACAAAAAAACATTTTGTGACCTCAAT
ACCATCTAGCACCCCTCTGCCAAAATAAAACCATCTAGTACTCTCGGTAA
CCATCTAGTACTCTCGGTAACCATCTAGTTCTAAAAATTCTTGACTCAAC
TTTCCATTTTCTTTCTAGGTGATCTAGCAGCTAAATTCATGTTAGACGCT
GACAAATATGGTGTGAAAAAGTACTGGATCCTACTCTCACAATATCGAGA
ACCAGAAATAGCCCAAAATCACCCAGAATTCATTGGTATCGTTCGATCAA
TCAAAAATTATCGATATCAGAAAATCGAGTACCATAACGACACGGTGTGC
TCCCAACCAACTAAAATCATGGAGGTTTTCAGACGCCAGGCAAAAAGTTG
CTCCTCAACGGAAGTTTCTTCACAAAATTCCCGTTATCTTGTAGATGAAA
TTAAATACGCCTGGAGTATTTTGATACCAAACCGTTTAGTAGTTGTACGA
ACTATATTAGAAGATGGTTTTTATAATTATATGGATGTTGTACAATTCTA
TAATAATAAAGTTCATTCCAAACAACGAGTTAAGAATCTGAAAATTACTC
AAAAAGCTATCCAACTTGGTACTGGTCAATGCCGAGAATGTAAAGAATGC
AAGAATCAATGCTTGAAGACAGGACCTCGTGTTGTTGAGCCTGTTAATTA
TACCAAATCATTCGCTCTCGGGTGTTTGAAATGTAGACAGGGTTTAATAT
TCGATCCGGAATATGGGACCTGTACCGAATGCCCTATCCACACTATGGCT
AATAAAAATCAAACTAAATGTTATGACCCTTACATCAAGGAAGATATATT
CTTAGCGTGTTATATCGTCAATGGTCTTGGATTACTCTTATGTCTTTTTA
CAGCATTTGTATATTACAGACATAGAGATACACCTGTTGTTCGTTCAAGT
GATTTCACGCTCACTATTATTCAACTGTTGCTATGTGCCACCATATTTGT
TGCATTACCAATAGTAACGTTAGCTCCGTTATCTTGGTTTGTTTGCACTG
TCAGACCATGTGTTTTTGGGATTCTCCTGGTAGCGATCGTATCCATTGTG
GTATGCAAAGCGGAGAAAATTTTGATCATATTTTACACGCGTCGGCGCTT
AACACCAAAGGATATTAAAGATCTTTATATTCGTCAGCTCTGTATCTTCT
TATTCTTACTCATAATTGATATGATCATTTTACCGACAACTTTCCGACTA
CCATCGTCGGTTAAAACTCGCAAATTCCCGACTACGAGTGACAATACGTA
CTTGATACGATATTGTAGTACCGATGATCGCTTCGATGTACAAATCGTGT
ATTGTATCGTGCTTTTATTATTAGCGATCGCGCAAGGATATCGTGGTCGA
AAACTGCCAAGTAATTATAATGAAGGCAACTCAATCATCGTAAGTGCGTC
ATCCACGATTTGCGCTTTCATTTTCAAAATCTGGATAACAAACACACCAC
GACACCGATTCGAAAGAACATCTACAGTATGGTTATCTTTGAGTGTCAGT
GTTCTGTTATTAATTCTACCTCTTTACGGACCAAAGGTATACATTATTTT
ACTTTTACCGCATAAAAACACTAAGAAACATATTATGAATCGAATGTTAT
CTGACAGTTCTATGAAAAGATCTGAAGTAGCGTTTTCTTTTCGTAAACGA
CAAAGCAAGAAACAATTACTGGATCCTTCTGATATCAAATTTCTCCCTAA
AAACAATAATGATGACGGGGGTAGTGATGTTGATGGTAATGAGGATGAAA
TGATTGAGATGAACGACCTGTCAACGTGATTAATTTTTCCCTGAAACACT
ACCTGTCACGGCTGTGAATATTCATATCAAAGCTTTCAGAAA

Coding sequence (CDS) from alignment at sc0000076:697457..701948-

>TCONS_00007413 ID=TCONS_00007413|Name=TCONS_00007413|organism=Clytia hemisphaerica|type=CDS|length=7164bp|location=Sequence derived from alignment at sc0000076:697457..701948- (Clytia hemisphaerica)
GTGATCTAGCAGCTAAATTCATGTTAGACGCTGACAAATATGGTGTGAAA
AAGTACTGGATCCTACTCTCACAATATCGAGAACCAGAAATAGCCCAAAA
TCACCCAGAATTCATTGGTATCGTTCGATCAATCAAAAATTATCGATATC
AGAAAATCGAGTACCATAACGACACGGTGTGCTCCCAACCAACTAAAATC
ATGGAGGTTTTCAGACGCCAGGCAAAAAGTTGCTCCTCAACGGAAGTTTC
TTCACAAAATTCCCGTTATCTTGTAGATGAAATTAAATACGCCTGGAGTA
TTTTGATACCAAACCGTTTAGTAGTTGTACGAACTATATTAGAAGATGGT
TTTTATAATTATATGGATGTTGTACAATTCTATAATAATAAAGTTCATTC
CAAACAACGAGTTAAGAATCTGAAAATTACTCAAAAAGCTATCCAACTTG
GTACTGGTCAATGCCGAGAATGTAAAGAATGCAAGAATCAATGCTTGAAG
ACAGGACCTCGTGTTGTTGAGCCTGTTAATTATACCAAATCATTCGCTCT
CGGGTGTTTGAAATGTAGACAGGGTTTAATATTCGATCCGGAATATGGGA
CCTGTACCGAATGCCCTATCCACACTATGGCTAATAAAAATCAAACTAAA
TGTTATGACCCTTACATCAAGGAAGATATATTCTTAGCGTGTTATATCGT
CAATGGTCTTGGATTACTCTTATGTCTTTTTACAGCATTTGTATATTACA
GACATAGAGATACACCTGTTGTTCGTTCAAGTGATTTCACGCTCACTATT
ATTCAACTGTTGCTATGTGCCACCATATTTGTTGCATTACCAATAGTAAC
GTTAGCTCCGTTATCTTGGTTTGTTTGCACTGTCAGACCATGTGTTTTTG
GGATTCTCCTGGTAGCGATCGTATCCATTGTGGTATGCAAAGCGGAGAAA
ATTTTGATCATATTTTACACGCGTCGGCGCTTAACACCAAAGGATATTAA
AGATCTTTATATTCGTCAGCTCTGTATCTTCTTATTCTTACTCATAATTG
ATATGATCATTTTACCGACAACTTTCCGACTACCATCGTCGGTTAAAACT
CGCAAATTCCCGACTACGAGTGACAATACGTACTTGATACGATATTGTAG
TACCGATGATCGCTTCGATGTACAAATCGTGTATTGTATCGTGCTTTTAT
TATTAGCGATCGCGCAAGGATATCGTGGTCGAAAACTGCCAAGTAATTAT
AATGAAGGCAACTCAATCATCGTAAGTGCGTCATCCACGATTTGCGCTTT
CATTTTCAAAATCTGGATAACAAACACACCACGACACCGATTCGAAAGAA
CATCTACAGTATGGTTATCTTTGAGTGTCAGTGTTCTGTTATTAATTCTA
CCTCTTTACGGACCAAAGGTATACATTATTTTACTTTTACCGCATAAAAA
CACTAAGAAACATATTATGAATCGAATGTTATCTGACAGTTCTATGAAAA
GATCTGAAGTAGCGTTTTCTTTTCGTAAACGACAAAGCAAGAAACAATTA
CTGGATCCTTCTGATATCAAATTTCTCCCTAAAAACAATAATGATGACGG
GGGTAGTGATGTTGATGGTAATGAGGATGAAATGATTGAGATGAACGACC
TGTCAACGTGAGTTTTTCCAATGTTTAAATTATCAGATGACTATCGACGT
TGGTCAGATAATTTTATTCATTTCGAACCAATTGTTGCTATGATACCAGA
AGATATTGTTGTTGATATCATCAAAAAATTCGATTGGAAGCACGTGGCTA
TTGTTCAAATCAAAAGAAATTCTATCGAAGACAAGGATAAGTTAAAAATG
GATAGGATTCGAAGAGAGTTACCAAACCTTTGTTTTGATTACCAGAACCT
AAATACGACGAGTGTAGCTATTGATGATGGCATCAAAAGAAGGTTATTTG
AGACATTGAAAAGAGACCAATCAGTAAAAGCTGTTATCATCAAGGATGTT
TGTTTGGTATAAGTTATCCGGCCTATTTCCTGCAGTTTTAATGCTATTTA
TTACAATCACCACCGATTGTGCTCGCCCAGAAAAGAAAGATGTGATTGTA
GGTCTAATAAGTAAATGTATGCAACGACCAATCGGTCAAAGAATTGCGAT
GGGATTAGTGATGAGTAAAAAGATTGGTATCTTGGCTAGAACAGGATTTA
TCGGCAGATACAAGGAGTTTGACGTTTGTGAAGATGAGCGAGATCTTGTA
GAGACACTGAATAAACTTTTACTGGAACCAGAATGGATTCTTAAAGACGA
GCGATTGAGAATAAAAGGAATCATTGCATTTATACCTGAAAACTTACTGA
AGTTGGCTGTCTCAATATTATCCTACACTGACATAAAGGTGATCTAGCAG
CTAAATTCATGTTAGACGCTGACAAATATGGTGTGAAAAAGTACTGGATC
CTACTCTCACAATATCGAGAACCAGAAATAGCCCAAAATCACCCAGAATT
CATTGGTATCGTTCGATCAATCAAAAATTATCGATATCAGAAAATCGAGT
ACCATAACGACACGGTGTGCTCCCAACCAACTAAAATCATGGAGGTTTTC
AGACGCCAGGCAAAAAGTTGCTCCTCAACGGAAGTTTCTTCACAAAATTC
CCGTTATCTTGTAGATGAAATTAAATACGCCTGGAGTATTTTGATACCAA
ACCGTTTAGTAGTTGTACGAACTATATTAGAAGATGGTTTTTATAATTAT
ATGGATGTTGTACAATTCTATAATAATAAAGTTCATTCCAAACAACGAGT
TAAGAATCTGAAAATTACTCAAAAAGCTATCCAACTTGGTACTGGTCAAT
GCCGAGAATGTAAAGAATGCAAGAATCAATGCTTGAAGACAGGACCTCGT
GTTGTTGAGCCTGTTAATTATACCAAATCATTCGCTCTCGGGTGTTTGAA
ATGTAGACAGGGTTTAATATTCGATCCGGAATATGGGACCTGTACCGAAT
GCCCTATCCACACTATGGCTAATAAAAATCAAACTAAATGTTATGACCCT
TACATCAAGGAAGATATATTCTTAGCGTGTTATATCGTCAATGGTCTTGG
ATTACTCTTATGTCTTTTTACAGCATTTGTATATTACAGACATAGAGATA
CACCTGTTGTTCGTTCAAGTGATTTCACGCTCACTATTATTCAACTGTTG
CTATGTGCCACCATATTTGTTGCATTACCAATAGTAACGTTAGCTCCGTT
ATCTTGGTTTGTTTGCACTGTCAGACCATGTGTTTTTGGGATTCTCCTGG
TAGCGATCGTATCCATTGTGGTATGCAAAGCGGAGAAAATTTTGATCATA
TTTTACACGCGTCGGCGCTTAACACCAAAGGATATTAAAGATCTTTATAT
TCGTCAGCTCTGTATCTTCTTATTCTTACTCATAATTGATATGATCATTT
TACCGACAACTTTCCGACTACCATCGTCGGTTAAAACTCGCAAATTCCCG
ACTACGAGTGACAATACGTACTTGATACGATATTGTAGTACCGATGATCG
CTTCGATGTACAAATCGTGTATTGTATCGTGCTTTTATTATTAGCGATCG
CGCAAGGATATCGTGGTCGAAAACTGCCAAGTAATTATAATGAAGGCAAC
TCAATCATCGTAAGTGCGTCATCCACGATTTGCGCTTTCATTTTCAAAAT
CTGGATAACAAACACACCACGACACCGATTCGAAAGAACATCTACAGTAT
GGTTATCTTTGAGTGTCAGTGTTCTGTTATTAATTCTACCTCTTTACGGA
CCAAAGGTATACATTATTTTACTTTTACCGCATAAAAACACTAAGAAACA
TATTATGAATCGAATGTTATCTGACAGTTCTATGAAAAGATCTGAAGTAG
CGTTTTCTTTTCGTAAACGACAAAGCAAGAAACAATTACTGGATCCTTCT
GATATCAAATTTCTCCCTAAAAACAATAATGATGACGGGGGTAGTGATGT
TGATGGTAATGAGGATGAAATGATTGAGATGAACGACCTGTCAACGTGAG
TTTTTCCAATGTTTAAATTATCAGATGACTATCGACGTTGGTCAGATAAT
TTTATTCATTTCGAACCAATTGTTGCTATGATACCAGAAGATATTGTTGT
TGATATCATCAAAAAATTCGATTGGAAGCACGTGGCTATTGTTCAAATCA
AAAGAAATTCTATCGAAGACAAGGATAAGTTAAAAATGGATAGGATTCGA
AGAGAGTTACCAAACCTTTGTTTTGATTACCAGAACCTAAATACGACGAG
TGTAGCTATTGATGATGGCATCAAAAGAAGGTTATTTGAGACATTGAAAA
GAGACCAATCAGTAAAAGCTGTTATCATCAAGGATGTTTGTTTGGTATAA
GTTATCCGGCCTATTTCCTGCAGTTTTAATGCTATTTATTACAATCACCA
CCGATTGTGCTCGCCCAGAAAAGAAAGATGTGATTGTAGGTCTAATAAGT
AAATGTATGCAACGACCAATCGGTCAAAGAATTGCGATGGGATTAGTGAT
GAGTAAAAAGATTGGTATCTTGGCTAGAACAGGATTTATCGGCAGATACA
AGGAGTTTGACGTTTGTGAAGATGAGCGAGATCTTGTAGAGACACTGAAT
AAACTTTTACTGGAACCAGAATGGATTCTTAAAGACGAGCGATTGAGAAT
AAAAGGAATCATTGCATTTATACCTGAAAACTTACTGAAGTTGGCTGTCT
CAATATTATCCTACACTGACATAAAGGTGATCTAGCAGCTAAATTCATGT
TAGACGCTGACAAATATGGTGTGAAAAAGTACTGGATCCTACTCTCACAA
TATCGAGAACCAGAAATAGCCCAAAATCACCCAGAATTCATTGGTATCGT
TCGATCAATCAAAAATTATCGATATCAGAAAATCGAGTACCATAACGACA
CGGTGTGCTCCCAACCAACTAAAATCATGGAGGTTTTCAGACGCCAGGCA
AAAAGTTGCTCCTCAACGGAAGTTTCTTCACAAAATTCCCGTTATCTTGT
AGATGAAATTAAATACGCCTGGAGTATTTTGATACCAAACCGTTTAGTAG
TTGTACGAACTATATTAGAAGATGGTTTTTATAATTATATGGATGTTGTA
CAATTCTATAATAATAAAGTTCATTCCAAACAACGAGTTAAGAATCTGAA
AATTACTCAAAAAGCTATCCAACTTGGTACTGGTCAATGCCGAGAATGTA
AAGAATGCAAGAATCAATGCTTGAAGACAGGACCTCGTGTTGTTGAGCCT
GTTAATTATACCAAATCATTCGCTCTCGGGTGTTTGAAATGTAGACAGGG
TTTAATATTCGATCCGGAATATGGGACCTGTACCGAATGCCCTATCCACA
CTATGGCTAATAAAAATCAAACTAAATGTTATGACCCTTACATCAAGGAA
GATATATTCTTAGCGTGTTATATCGTCAATGGTCTTGGATTACTCTTATG
TCTTTTTACAGCATTTGTATATTACAGACATAGAGATACACCTGTTGTTC
GTTCAAGTGATTTCACGCTCACTATTATTCAACTGTTGCTATGTGCCACC
ATATTTGTTGCATTACCAATAGTAACGTTAGCTCCGTTATCTTGGTTTGT
TTGCACTGTCAGACCATGTGTTTTTGGGATTCTCCTGGTAGCGATCGTAT
CCATTGTGGTATGCAAAGCGGAGAAAATTTTGATCATATTTTACACGCGT
CGGCGCTTAACACCAAAGGATATTAAAGATCTTTATATTCGTCAGCTCTG
TATCTTCTTATTCTTACTCATAATTGATATGATCATTTTACCGACAACTT
TCCGACTACCATCGTCGGTTAAAACTCGCAAATTCCCGACTACGAGTGAC
AATACGTACTTGATACGATATTGTAGTACCGATGATCGCTTCGATGTACA
AATCGTGTATTGTATCGTGCTTTTATTATTAGCGATCGCGCAAGGATATC
GTGGTCGAAAACTGCCAAGTAATTATAATGAAGGCAACTCAATCATCGTA
AGTGCGTCATCCACGATTTGCGCTTTCATTTTCAAAATCTGGATAACAAA
CACACCACGACACCGATTCGAAAGAACATCTACAGTATGGTTATCTTTGA
GTGTCAGTGTTCTGTTATTAATTCTACCTCTTTACGGACCAAAGGTATAC
ATTATTTTACTTTTACCGCATAAAAACACTAAGAAACATATTATGAATCG
AATGTTATCTGACAGTTCTATGAAAAGATCTGAAGTAGCGTTTTCTTTTC
GTAAACGACAAAGCAAGAAACAATTACTGGATCCTTCTGATATCAAATTT
CTCCCTAAAAACAATAATGATGACGGGGGTAGTGATGTTGATGGTAATGA
GGATGAAATGATTGAGATGAACGACCTGTCAACGTGAGTTTTTCCAATGT
TTAAATTATCAGATGACTATCGACGTTGGTCAGATAATTTTATTCATTTC
GAACCAATTGTTGCTATGATACCAGAAGATATTGTTGTTGATATCATCAA
AAAATTCGATTGGAAGCACGTGGCTATTGTTCAAATCAAAAGAAATTCTA
TCGAAGACAAGGATAAGTTAAAAATGGATAGGATTCGAAGAGAGTTACCA
AACCTTTGTTTTGATTACCAGAACCTAAATACGACGAGTGTAGCTATTGA
TGATGGCATCAAAAGAAGGTTATTTGAGACATTGAAAAGAGACCAATCAG
TAAAAGCTGTTATCATCAAGGATGTTTGTTTGGTATAAGTTATCCGGCCT
ATTTCCTGCAGTTTTAATGCTATTTATTACAATCACCACCGATTGTGCTC
GCCCAGAAAAGAAAGATGTGATTGTAGGTCTAATAAGTAAATGTATGCAA
CGACCAATCGGTCAAAGAATTGCGATGGGATTAGTGATGAGTAAAAAGAT
TGGTATCTTGGCTAGAACAGGATTTATCGGCAGATACAAGGAGTTTGACG
TTTGTGAAGATGAGCGAGATCTTGTAGAGACACTGAATAAACTTTTACTG
GAACCAGAATGGATTCTTAAAGACGAGCGATTGAGAATAAAAGGAATCAT
TGCATTTATACCTGAAAACTTACTGAAGTTGGCTGTCTCAATATTATCCT
ACACTGACATAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004171XLOC_004171Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007413-proteinTCONS_00007413-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007413-exon-sc0000076-1575043694:701473..701948TCONS_00007413-exon-sc0000076-1575043694:701473..701948Clytia hemisphaericaexon
TCONS_00007413-exon-sc0000076-1575043694:699543..699876TCONS_00007413-exon-sc0000076-1575043694:699543..699876Clytia hemisphaericaexon
TCONS_00007413-exon-sc0000076-1575043694:697457..699180TCONS_00007413-exon-sc0000076-1575043694:697457..699180Clytia hemisphaericaexon
TCONS_00007413-exon-sc0000076-1510915933:701473..701948TCONS_00007413-exon-sc0000076-1510915933:701473..701948Clytia hemisphaericaexon
TCONS_00007413-exon-sc0000076-1510915933:699543..699876TCONS_00007413-exon-sc0000076-1510915933:699543..699876Clytia hemisphaericaexon
TCONS_00007413-exon-sc0000076-1510915933:697457..699180TCONS_00007413-exon-sc0000076-1510915933:697457..699180Clytia hemisphaericaexon
TCONS_00007413-exon-sc0000076-1491911889:701473..701948TCONS_00007413-exon-sc0000076-1491911889:701473..701948Clytia hemisphaericaexon
TCONS_00007413-exon-sc0000076-1491911889:699543..699876TCONS_00007413-exon-sc0000076-1491911889:699543..699876Clytia hemisphaericaexon
TCONS_00007413-exon-sc0000076-1491911889:697457..699180TCONS_00007413-exon-sc0000076-1491911889:697457..699180Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000076supercontigsc0000076:697457..701948 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0762962	0.0595207	0.0172773	0	0.740806	0.308958	0.667018	0.385692	0.231456	0.207058	0.417411	0.111788	1.06559	0.969612	0.597864	1.63655	0.97368	1.29152	0.973255	1.2391	1.63764	1.61915	0.997269	1.22479	2.71961	3.53843	1.79942	1.22815	0.0338731	0.0345114
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR017978GPCR_3_C
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007413 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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